Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145222.7 - phase: 0 
         (435 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g14950 unknown protein                                             583  e-167
At1g05360 unknown protein                                             538  e-153
At4g00440 unknown protein                                              29  4.4
At2g14500 hypothetical protein                                         28  7.6
At1g19750 hypothetical protein                                         28  7.6
At3g46130 Myb DNA binding protein -like                                28  9.9
At3g07720 unknown protein                                              28  9.9
At2g36380 putative ABC transporter                                     28  9.9
At2g35060 putative potassium transporter                               28  9.9
At1g27840 hypothetical protein                                         28  9.9

>At4g14950 unknown protein
          Length = 416

 Score =  583 bits (1503), Expect = e-167
 Identities = 281/389 (72%), Positives = 325/389 (83%), Gaps = 7/389 (1%)

Query: 2   ELENLTLTTQPFKTLKYSTLAVIQYIKKTMLYLLAKGGWLMLFSVAVGTLGVVLMTLGCL 61
           E+ENLTLTTQP  TLK    A IQYIK+++ YLLA GGW +L +  +   G +L+T+   
Sbjct: 25  EVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVSGGLLVTVDGP 84

Query: 62  HEKHLEEFLEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLK 121
           H KH+EE LEY R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT+KA  CGRVDLK
Sbjct: 85  HGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLKATLCGRVDLK 144

Query: 122 SAPYDTIQLNRGPSWLDKNCSQFGPPLFQSEYGTRVPLSSILPQVQMEAVLWGLGTAIGE 181
           SAPYDTIQL R PSWLDK+CS+FGPPL  S  G+RVPL+SILPQVQ+EA+LWG+GTA+GE
Sbjct: 145 SAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAILWGIGTALGE 204

Query: 182 LPPYFISRAARLSGSRMDAMEELD---SEDKGV----LNQIKCWFFSHTQHLNFFTILVL 234
           LPPYFISRAA +SGS +D MEELD   +ED G     LN++K W  +H+QHLNFFT+LVL
Sbjct: 205 LPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQHLNFFTVLVL 264

Query: 235 ASVPNPLFDLAGIMCGQFGIPFWNFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENE 294
           ASVPNPLFDLAGIMCGQFGIPFW FFLATLIGKAIIKTHIQT+FII VCNNQLLDW+ENE
Sbjct: 265 ASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCNNQLLDWMENE 324

Query: 295 FIWVLSHIPGFASVLPKLTANLHAMKDKYLKAPHPVSPNTKGKKWDFSFTSIWNTVVWLM 354
            IW+LSH+PG AS+LP LTA LHAMK+KY+ AP PV  + K KKWDFSF SIWN +VWLM
Sbjct: 325 LIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFASIWNGIVWLM 384

Query: 355 LMNFFIKIVNSTAQTHLKKQQESEVAALT 383
           L+NFF+KIV +TAQ HLKK+QE E+A LT
Sbjct: 385 LLNFFVKIVTATAQRHLKKKQEKEMATLT 413


>At1g05360 unknown protein
          Length = 416

 Score =  538 bits (1386), Expect = e-153
 Identities = 269/389 (69%), Positives = 305/389 (78%), Gaps = 8/389 (2%)

Query: 2   ELENLTLTTQPFKTLKYSTLAVIQYIKKTMLYLLAKGGWLMLFSVAVGTLGVVLMTLGCL 61
           +LE LTLT+QPFKTL+   +AV  Y+++   YLLA  GWL+LF         +L+TL   
Sbjct: 24  DLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWLILFCSIFVAFAALLVTLDGP 83

Query: 62  HEKHLEEFLEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLK 121
           H KH+EE  EY RFGLWW+ LGVASSIGLGSGLHTFVLYLGPHIALFTIK MQCGRVDLK
Sbjct: 84  HVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLHTFVLYLGPHIALFTIKVMQCGRVDLK 143

Query: 122 SAPYDTIQLNRGPSWLDKNCSQFGPPLFQSEYGTRVPLSSILPQVQMEAVLWGLGTAIGE 181
           SA YDTIQL R PSWLDK C +FG P+F S     VPLSSILPQVQ+EA+LWGLGTA+GE
Sbjct: 144 SAIYDTIQLKRSPSWLDKPCHEFGSPVFSSG----VPLSSILPQVQIEAILWGLGTALGE 199

Query: 182 LPPYFISRAARLSGSRMDAMEELDSEDKGVL----NQIKCWFFSHTQHLNFFTILVLASV 237
           LPPYFISRAA LSG +M  +E    +D G +    NQIK W  SH+Q+LNFFTIL+LASV
Sbjct: 200 LPPYFISRAASLSGGKMKELETCSGDDNGFIAKRVNQIKSWLLSHSQYLNFFTILILASV 259

Query: 238 PNPLFDLAGIMCGQFGIPFWNFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENEFIW 297
           PNPLFDLAGIMCGQF  PFW FFLATLIGKAIIKTHIQTVFII VCNNQLLDW+ENE I+
Sbjct: 260 PNPLFDLAGIMCGQFEKPFWEFFLATLIGKAIIKTHIQTVFIICVCNNQLLDWVENELIY 319

Query: 298 VLSHIPGFASVLPKLTANLHAMKDKYLKAPHPVSPNTKGKKWDFSFTSIWNTVVWLMLMN 357
           +LS +PGFAS LP+LTA L  MK+KYL A  PVS +   KKWD SF S+WN VVWLML+N
Sbjct: 320 ILSFVPGFASALPELTAKLRLMKEKYLIASPPVSSDINVKKWDLSFASVWNGVVWLMLLN 379

Query: 358 FFIKIVNSTAQTHLKKQQESEVAALTKKS 386
           FF +IV STAQ +LKKQQE E+ ALT KS
Sbjct: 380 FFGQIVTSTAQRYLKKQQEEELDALTNKS 408


>At4g00440 unknown protein
          Length = 831

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 21/74 (28%), Positives = 37/74 (49%), Gaps = 9/74 (12%)

Query: 322 KYLKAPHPVSP-NTKGKKWDFSFTSIWNTVVWLMLMNFFIKIVNSTAQTHLKKQQES--- 377
           + L  P  +SP N+ G++W+ S T+   +         FI +VN   +TH  + +E+   
Sbjct: 426 RILSFPEYLSPLNSPGRRWEKSSTAHKKSA-----SADFINLVNIKKETHASQPEENTDI 480

Query: 378 EVAALTKKSDSDTQ 391
           +V  L+K+ D   Q
Sbjct: 481 QVCNLSKEPDDSIQ 494


>At2g14500 hypothetical protein
          Length = 347

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 15/43 (34%), Positives = 25/43 (57%), Gaps = 2/43 (4%)

Query: 27  IKKTMLYLLAKGGW--LMLFSVAVGTLGVVLMTLGCLHEKHLE 67
           + +  L+ +  G W    +F++ V T G VLM L  L+EK++E
Sbjct: 239 VTRNYLFNVHNGPWGFRSIFNLVVTTSGEVLMVLNNLYEKNIE 281


>At1g19750 hypothetical protein
          Length = 254

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/68 (27%), Positives = 30/68 (43%), Gaps = 1/68 (1%)

Query: 185 YFISRAARLSGSRMDAMEELDSEDKGVLNQIKCWFFSHTQHLNFFTILVLASVPNPLFDL 244
           Y +S AA  S +  D     D E  G++ + KC F    QH N     + +++  P+ D 
Sbjct: 58  YLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAISSAIWYPI-DT 116

Query: 245 AGIMCGQF 252
              + G F
Sbjct: 117 GMFITGSF 124


>At3g46130 Myb DNA binding protein -like
          Length = 256

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 292 ENEFIWVLSHIPGFASVLPKLTANLHAMKDKYLKAPHPVS-PNTKGKKWDFSFTSIWN 348
           ENE ++ L  I  +  +       +  +KD Y +  H +S PN     W+ S  SIWN
Sbjct: 170 ENEDVYSLDDI--WREIDHSAVNIIKPVKDIYSEQSHCLSYPNLASPSWESSLDSIWN 225


>At3g07720 unknown protein
          Length = 329

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 149 FQSEYGTRVPLSSILPQVQMEAVLWGLGTAIGELPPYFISRAARLSGSRMDAMEELDSED 208
           F  E+  RVP+ + L    +E   W +  A G+ PP  +  A    G  +      DS  
Sbjct: 38  FGGEFQPRVPVDNQLYVFDLETQTWSIQEASGDAPPPRVGVAMAAVGPIIYFFGGRDSTH 97

Query: 209 KGVLNQIKCW 218
           +  LN++ C+
Sbjct: 98  Q-ELNELYCF 106


>At2g36380 putative ABC transporter
          Length = 1450

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 7/52 (13%)

Query: 218  WFFSHTQ----HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWNFFLATLI 265
            WF+ +      +   + ++++A  PN  + +AGI C  F + FWN F   LI
Sbjct: 1310 WFYYYMLTCFVYFTLYGMMLVALTPN--YQIAGI-CLSFFLSFWNLFSGFLI 1358


>At2g35060 putative potassium transporter
          Length = 792

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 27/80 (33%), Positives = 38/80 (46%), Gaps = 9/80 (11%)

Query: 31  MLYLLAKGGWLMLFSVAVGTLGVVLMTLGCLHEKHLEEFLEYFRFGLWWVALGVASSIGL 90
           ML+ + +GGW+ L   A   L + +   G L      EF  + R  + W+ LG+  S+GL
Sbjct: 500 MLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKR---YEFEMHCRVSMAWI-LGLGPSLGL 555

Query: 91  ----GSGLHTFVLYLG-PHI 105
               G GL    L  G PHI
Sbjct: 556 VRVPGVGLVYTELASGVPHI 575


>At1g27840 hypothetical protein
          Length = 254

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/68 (27%), Positives = 30/68 (43%), Gaps = 1/68 (1%)

Query: 185 YFISRAARLSGSRMDAMEELDSEDKGVLNQIKCWFFSHTQHLNFFTILVLASVPNPLFDL 244
           Y +S AA  S +  D     D E  G++ + KC F    QH N     + +++  P+ D 
Sbjct: 58  YLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPI-DT 116

Query: 245 AGIMCGQF 252
              + G F
Sbjct: 117 GLFITGSF 124


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.331    0.143    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,482,399
Number of Sequences: 26719
Number of extensions: 393650
Number of successful extensions: 1111
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1105
Number of HSP's gapped (non-prelim): 10
length of query: 435
length of database: 11,318,596
effective HSP length: 102
effective length of query: 333
effective length of database: 8,593,258
effective search space: 2861554914
effective search space used: 2861554914
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)


Medicago: description of AC145222.7