Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145218.1 - phase: 0 
         (63 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g27690 putative cytochrome P450                                     47  2e-06
At3g56630 cytochrome P450-like protein                                 37  0.001
At3g48520 cytochrome P450-like protein                                 37  0.002
At1g34540 cytochrome p450, putative                                    37  0.002
At5g63450 cytochrome P450-like protein                                 34  0.016
At5g23190 cytochrome P450-like protein                                 30  0.29
At1g13140 cytochrome P450 monooxygenase like protein                   30  0.29
At2g21910 putative cytochrome P450                                     28  0.65
At1g63710 cytochrome P450 like protein                                 28  0.65
At1g24540 putative cytochrome P450                                     28  1.1
At2g45970 putative cytochrome P450                                     27  1.9
At5g08250 cytochrome P450-like protein                                 27  2.5
At1g13150 putative cytochrome P450 monooxygenase                       27  2.5
At5g03780 myb -like protein                                            25  9.4

>At2g27690 putative cytochrome P450
          Length = 495

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDE-KIFDLRDIMRSSS 51
           +ASLEL SV+VR +A EI+  EI TRL+P + SF+ +   + DL+D+ R  S
Sbjct: 127 LASLELGSVSVRVFAHEIVKTEIETRLLPILTSFSDNPGSVLDLQDVFRRFS 178


>At3g56630 cytochrome P450-like protein
          Length = 499

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 16/46 (34%), Positives = 30/46 (64%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           AS E ++ ++R + +  +  EI+TRL+P +   A + K+ DL+DI+
Sbjct: 129 ASYEFSTKSLRDFVMSNVTVEINTRLVPVLAEAATNGKLIDLQDIL 174


>At3g48520 cytochrome P450-like protein
          Length = 506

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 15/48 (31%), Positives = 32/48 (66%)

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIMR 48
           +AS E ++ ++RS+A E++ +E+  RL+P + + A      DL+D+++
Sbjct: 133 LASHEFSTRSLRSFAFEVLKDEVENRLVPVLSTAADVGTTVDLQDVLK 180


>At1g34540 cytochrome p450, putative
          Length = 498

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 16/46 (34%), Positives = 29/46 (62%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           AS E ++ ++R + +  +  EI+TRL+P +   A   K+ DL+DI+
Sbjct: 129 ASYEFSTKSLRDFVMSNVTVEINTRLVPVLVEAATTGKLIDLQDIL 174


>At5g63450 cytochrome P450-like protein
          Length = 510

 Score = 33.9 bits (76), Expect = 0.016
 Identities = 15/48 (31%), Positives = 28/48 (58%)

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIMR 48
           +AS E T  ++R +  EI+ EE+  RLIP + S     +  D +++++
Sbjct: 135 LASHEFTMRSLREFTFEILREEVQNRLIPVLSSAVDCGETVDFQEVLK 182


>At5g23190 cytochrome P450-like protein
          Length = 559

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 13/46 (28%), Positives = 24/46 (51%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           AS+E  S   R    + + E +H RL+P + +  +     DL+D++
Sbjct: 162 ASIEFHSAKFRQLTTQSLFELVHKRLLPVLETSVKSSSPIDLQDVL 207


>At1g13140 cytochrome P450 monooxygenase like protein
          Length = 519

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 12/43 (27%), Positives = 25/43 (57%)

Query: 5   ELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           E+ S     ++ +   + +  +L+  M SFAR ++ FDL+D++
Sbjct: 148 EMHSTRFVEHSFQTTQDLVRKKLLKVMESFARSQEAFDLQDVL 190


>At2g21910 putative cytochrome P450
          Length = 510

 Score = 28.5 bits (62), Expect = 0.65
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 12  RSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIMR 48
           +S++L  I  +I   L+P +  FA    +FDL+D+ +
Sbjct: 140 QSFSLRTITCKIKNGLVPVLDHFAEANTVFDLQDVFQ 176


>At1g63710 cytochrome P450 like protein
          Length = 523

 Score = 28.5 bits (62), Expect = 0.65
 Identities = 14/46 (30%), Positives = 25/46 (53%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           A+LE T+ T+R      ++  I  RL+P + S     +  DL+D++
Sbjct: 134 AALEFTTRTLRQAMARWVDRAIKNRLVPILESARSRAEPIDLQDVL 179


>At1g24540 putative cytochrome P450
          Length = 522

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 10/47 (21%), Positives = 26/47 (55%)

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           +A  E+ S     +    + + +  +L+P M + +  +++FDL+D++
Sbjct: 141 VAKTEMHSSRFLEHTFTTMRDLVDQKLVPLMENLSTSKRVFDLQDLL 187


>At2g45970 putative cytochrome P450
          Length = 537

 Score = 26.9 bits (58), Expect = 1.9
 Identities = 13/46 (28%), Positives = 24/46 (51%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           A+LE T+ T+R      +N  I  R +P + +     +  DL+D++
Sbjct: 134 AALEFTTRTLRQAMARWVNRAIKLRFLPILENARLGSEPIDLQDLL 179


>At5g08250 cytochrome P450-like protein
          Length = 550

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 14/46 (30%), Positives = 25/46 (53%), Gaps = 4/46 (8%)

Query: 2   ASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDIM 47
           AS+E  S   R    + ++E +H RL+P + +  +     DL+DI+
Sbjct: 163 ASVEFHSAKFRQLTSQSLHELVHNRLLPVLETSGK----IDLQDIL 204


>At1g13150 putative cytochrome P450 monooxygenase
          Length = 529

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 5   ELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIFDLRDI 46
           E+ S     ++ +     +  +L+  M SFA+ ++ FDL+D+
Sbjct: 141 EMHSTGFVEHSFQTTQHLVRKKLLKVMESFAKSQEAFDLQDV 182


>At5g03780 myb -like protein
          Length = 420

 Score = 24.6 bits (52), Expect = 9.4
 Identities = 19/62 (30%), Positives = 28/62 (44%), Gaps = 13/62 (20%)

Query: 5   ELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEKIF-------DLRDIMRSSSKYMSKN 57
           E+  V V  +A E        + +P+       EK+F       DL+D  RS  K M+KN
Sbjct: 356 EMLKVGVEKFAAEA------NKNMPWRKILEMGEKVFHETRTPADLKDKWRSMVKIMNKN 409

Query: 58  ER 59
           E+
Sbjct: 410 EQ 411


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.135    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,068,212
Number of Sequences: 26719
Number of extensions: 29448
Number of successful extensions: 105
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 93
Number of HSP's gapped (non-prelim): 14
length of query: 63
length of database: 11,318,596
effective HSP length: 39
effective length of query: 24
effective length of database: 10,276,555
effective search space: 246637320
effective search space used: 246637320
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)


Medicago: description of AC145218.1