BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145109.3 - phase: 0 
         (190 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g27390 putative protein import receptor                            107  5e-24
At3g27080 TOM20, putative                                             106  6e-24
At3g27070 TOM20, putative                                             100  4e-22
At5g40930 protein import receptor TOM20, mitochondrial-like            80  5e-16
At5g03345 unknown protein                                              29  1.7
At5g56290 peroxisomal targeting signal type 1 receptor                 28  2.2
At5g41950 unknown protein                                              28  2.2
At5g42220 unknown protein                                              28  3.8
At3g17740 unknown protein                                              28  3.8
At2g22560 hypothetical protein                                         27  8.5

>At1g27390 putative protein import receptor
          Length = 208

 Score =  107 bits (266), Expect = 5e-24
 Identities = 58/152 (38%), Positives = 84/152 (55%), Gaps = 1/152 (0%)

Query: 1   MDYPLRKFKFHLPMKHECILAEQRYNKNPHDAENLTRWGVALLRLSQAHSFPDSLHTIQV 60
           M++    F+  +  +H    +E +Y  +P D+ENL +WG ALL LSQ    P++   +  
Sbjct: 1   MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLND 60

Query: 61  SISKLEEAFSLNPNNPDVHWLLGMALTMQALLTPDSHDAKLHFDSADVYFKRAFRQDPSD 120
           +ISKLEEA ++NP      W +  A T  A    D  +AK HFD A  YF+RA  +DP +
Sbjct: 61  AISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGN 120

Query: 121 PTYQISLELPDTKDHEQHPKIVNHGLGQQSKG 152
            TY+ SL+    K  E H + +N G+GQQ  G
Sbjct: 121 DTYRKSLD-SSLKAPELHMQFMNQGMGQQILG 151


>At3g27080 TOM20, putative
          Length = 202

 Score =  106 bits (265), Expect = 6e-24
 Identities = 61/149 (40%), Positives = 82/149 (54%), Gaps = 6/149 (4%)

Query: 21  AEQRYNKNPHDAENLTRWGVALLRLSQAHSFPDSLHTIQVSISKLEEAFSLNPNNPDVHW 80
           AE  Y  NP DA+NLTRWG  LL LSQ HS  D+   IQ +I+K EEA  ++P   +  W
Sbjct: 20  AENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVW 79

Query: 81  LLGMALTMQALLTPDSHDAKLHFDSADVYFKRAFRQDPSDPTYQISLELPDTKDHEQHPK 140
            +G A T  A LTPD  +AK +FD A  +F++A  + P +  Y  SLE+   K  + H +
Sbjct: 80  CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM-TAKAPQLHAE 138

Query: 141 IVNHGLGQQSKGSSSA-----TKVIKHYK 164
               GLG Q  G   A     +K +K+ K
Sbjct: 139 AYKQGLGSQPMGRVEAPAPPSSKAVKNKK 167


>At3g27070 TOM20, putative
          Length = 188

 Score =  100 bits (250), Expect = 4e-22
 Identities = 65/164 (39%), Positives = 87/164 (52%), Gaps = 8/164 (4%)

Query: 21  AEQRYNKNPHDAENLTRWGVALLRLSQAHSFPDSLHTIQVSISKLEEAFSLNPNNPDVHW 80
           AE+ Y  NP DA+NL RWG ALL LSQ  +  DSL  IQ +ISKLE+A  ++P   D  W
Sbjct: 14  AEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVW 73

Query: 81  LLGMALTMQALLTPDSHDAKLHFDSADVYFKRAFRQDPSDPTYQISLELPDTKDHEQ--- 137
            LG A T  A LTPD   A+L+F  A ++F  A  Q P +  Y  SLE+ D         
Sbjct: 74  CLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGF 133

Query: 138 HPKIVNHGLGQQSKGSSSATKVIKH-----YKFLVFLFTLLVIG 176
           H   +   LG     +  + KV+K+      K++V  + +L IG
Sbjct: 134 HKNRLLSLLGGVETLAIPSPKVVKNKKSSDEKYIVMGWVILAIG 177


>At5g40930 protein import receptor TOM20, mitochondrial-like
          Length = 187

 Score = 80.5 bits (197), Expect = 5e-16
 Identities = 56/161 (34%), Positives = 80/161 (48%), Gaps = 9/161 (5%)

Query: 15  KHECILAEQRYNKNPHDAENLTRWGVALLRLSQAHSFPDSLHTIQVSISKLEEAFSLNPN 74
           +H   +AE  Y KNP DAENLTRW  ALL LSQ  + P  +  I  +I KL EA  ++P 
Sbjct: 14  EHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEPKQM--ILEAILKLGEALVIDPK 71

Query: 75  NPDVHWLLGMALTMQALLTPDSHDAKLHFDSADVYFKRAFRQDPSDPTYQISLELPDTKD 134
             D  WL+G A      L+ D  +A  +F+ A  +F+ A  + P    Y+ SL L     
Sbjct: 72  KHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLA---- 127

Query: 135 HEQHPKIVNHGLGQQSKGSSSATKVIK--HYKFLVFLFTLL 173
             + P++   G    S  S+   K  K   +K+ VF + +L
Sbjct: 128 -SKAPELHTGGTAGPSSNSAKTMKQKKTSEFKYDVFGWVIL 167


>At5g03345 unknown protein
          Length = 104

 Score = 28.9 bits (63), Expect = 1.7
 Identities = 20/56 (35%), Positives = 28/56 (49%), Gaps = 2/56 (3%)

Query: 65  LEEAFSLNPNNPDVHWLLGMALTMQALLTPDSHDAKLHFDSADVYFKRAFRQDPSD 120
           +EE FS  P N  +  ++G+AL M A LT       +H DS +   +  F  D SD
Sbjct: 32  MEEEFSRPPINVILELIIGLALCMWAALTFPGKFLSIHPDSDE--NRAVFLPDNSD 85


>At5g56290 peroxisomal targeting signal type 1 receptor
          Length = 728

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 12/68 (17%)

Query: 53  DSLHTIQVSISKLEEAFSLNPNNPDVHWLLGMALTMQALLTPDSHDAKLHFDSADVYFKR 112
           DSL+   ++     EA  LNP + DVH +LG+            ++    FD A   F+ 
Sbjct: 568 DSLYHADIA-RLFNEASQLNPEDADVHIVLGVL-----------YNLSREFDRAITSFQT 615

Query: 113 AFRQDPSD 120
           A +  P+D
Sbjct: 616 ALQLKPND 623


>At5g41950 unknown protein
          Length = 565

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 31/117 (26%), Positives = 46/117 (38%), Gaps = 10/117 (8%)

Query: 22  EQRYNKNPHDAENLTRWGVALLRLSQAHSFPDSLHTIQVSISKLEEAFSLNPNNPDVHWL 81
           E+    N + ++ L  WG+ L  LSQ     +    ++ +ISK   A  L  +     + 
Sbjct: 306 EKAVQLNWNSSQALNNWGLVLQELSQIVPAREKEKVVRTAISKFRAAIRLQFDFHRAIYN 365

Query: 82  LG---MALTMQALLTPDSHDAK------LHFDSADVYFKRAFRQDPSDPTYQISLEL 129
           LG     L    L T  S + K      L+  SA +Y   A    PS   Y  +L L
Sbjct: 366 LGTVLYGLAEDTLRTGGSGNGKDMPPGELYSQSA-IYIAAAHSLKPSYSVYSSALRL 421


>At5g42220 unknown protein
          Length = 879

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 52  PDSLHTIQVSISKLEEAFSLNPNNPD 77
           PDSL T+   I+++E+A S N   PD
Sbjct: 251 PDSLDTLMEFINRMEQALSQNGYQPD 276


>At3g17740 unknown protein
          Length = 1149

 Score = 27.7 bits (60), Expect = 3.8
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 27  KNPHDAENLTRWGVALLRLSQAHSFPD-SLHTIQVSISKLEEAFSLNPNNPDV 78
           + PHDA+    +     ++S   S     L T++  IS LE+AF LNP++ ++
Sbjct: 287 ERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEEL 339


>At2g22560 hypothetical protein
          Length = 891

 Score = 26.6 bits (57), Expect = 8.5
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 20  LAEQRYNKNPHDA--ENLTRWGVALLRLSQAHSFPDSLHTIQVSISKLEE 67
           L E+++  N  +   ENL  W        Q  S+  S+  +Q  ISKLE+
Sbjct: 660 LVEEQFRLNIDELLEENLDFWLRFSTAFGQIQSYDTSIEDLQAEISKLEQ 709


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.321    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,418,234
Number of Sequences: 26719
Number of extensions: 169422
Number of successful extensions: 385
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 376
Number of HSP's gapped (non-prelim): 11
length of query: 190
length of database: 11,318,596
effective HSP length: 94
effective length of query: 96
effective length of database: 8,807,010
effective search space: 845472960
effective search space used: 845472960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)