BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144893.1 + phase: 0 /pseudo
(311 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25010 unknown protein 102 3e-22
At1g17930 unknown protein 95 6e-20
At1g48120 serine/threonine phosphatase PP7, putative 86 3e-17
At1g50770 hypothetical protein 40 0.001
At1g51545 unknown protein 40 0.002
At5g18510 putative protein 39 0.005
At4g16050 hypothetical protein 35 0.040
At1g50830 hypothetical protein 35 0.068
At1g50820 hypothetical protein 34 0.089
At2g07190 hypothetical protein 33 0.15
At1g32120 hypothetical protein 33 0.15
At1g50790 hypothetical protein 31 0.75
At1g07700 unknown protein 31 0.98
At3g53480 ABC transporter - like protein 30 1.7
At2g37280 putative ABC transporter 29 2.9
At1g77580 unknown protein 29 2.9
At1g47320 hypothetical protein 29 2.9
At4g09410 putative protein 29 3.7
At1g50760 hypothetical protein 29 3.7
At5g62970 putative protein 28 4.9
>At2g25010 unknown protein
Length = 509
Score = 102 bits (254), Expect = 3e-22
Identities = 82/284 (28%), Positives = 130/284 (44%), Gaps = 35/284 (12%)
Query: 17 NRLHGTDLGWLQDTSYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPI 76
N + G+ + + +++ LI A VE W ET++FHLP E+T+TLD+V +L + I
Sbjct: 53 NLVDKAGFGYFRKIGPMSLNNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEI 112
Query: 77 DDMLLSHGFISRDEAVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLKEQRD 136
D + + + A+++ L A EV+ ++ + ++L++ F EC ++
Sbjct: 113 DGDPIVGSKVGDEVAMDMCGRLLGKLPSAANKEVNCSR---VKLNWLKRTFSECPED--- 166
Query: 137 LAAEYGVTEEVERLQDQTVRIYLLYLVGITIFTDKSQWAVDVVYLKFFRNIDLVSSFSWG 196
A + V + R YLLYL+G TIF V V YL F + D ++WG
Sbjct: 167 --ASFDVVK-------CHTRAYLLYLIGSTIFATTDGDKVSVKYLPLFEDFDQAGRYAWG 217
Query: 197 VAALAHLY*ELNNAARWNCSQMAGYLTLFVYGLYIYTWLSLVQAWVFHHFPGMGSNEVWE 256
AALA LY L NA+ + S + G LT L+Q W + H +G E
Sbjct: 218 AAALACLYRALGNASLKSQSNICGCLT-------------LLQCWSYFHL-DIGRPE--- 260
Query: 257 NYVENQYPRAMLFLPLSGLGTVD--HYINYLDALDLTRVVMAQY 298
E +P A+L+ D Y LD LD +++ Y
Sbjct: 261 -KSEACFPLALLWKGKGSRSKTDLSEYRRELDDLDPSKITWCPY 303
>At1g17930 unknown protein
Length = 478
Score = 94.7 bits (234), Expect = 6e-20
Identities = 74/265 (27%), Positives = 115/265 (42%), Gaps = 36/265 (13%)
Query: 25 GWLQDTSYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHG 84
GW + I +++ LI A VE W ET++FH P E+T+TLD+V+ +L + +D + G
Sbjct: 52 GWFRLVGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVV-G 110
Query: 85 FISRDEAVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLKEQRDLAAEYGVT 144
+DE + L + + G +L++ F EC K EY
Sbjct: 111 VKEKDEDPSQVCLRLLGK-----LPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT- 164
Query: 145 EEVERLQDQTVRIYLLYLVGITIFTDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY 204
R YL+Y+VG TIF + V YL F + + ++WG AALA LY
Sbjct: 165 -----------RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLY 213
Query: 205 *ELNNAARWNCSQMAGYLTLFVYGLYIYTWLSLVQAWVFHHFPGMGSNEVWENYVENQYP 264
++ NA++ + S + G LT L+Q W + H N Q+P
Sbjct: 214 RQIGNASQRSQSIIGGCLT-------------LLQCWSYFHL-----NIDRPKRTTRQFP 255
Query: 265 RAMLFLPLSGLGTVDHYINYLDALD 289
A+L+ + + Y ALD
Sbjct: 256 LALLWKGRQQSRSKNDLFKYRKALD 280
>At1g48120 serine/threonine phosphatase PP7, putative
Length = 1338
Score = 85.9 bits (211), Expect = 3e-17
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 31 SYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDE 90
++I +D+ LI A VE W ET +FHLP EITVTL DV LL + +D ++ ++
Sbjct: 76 AFIQLDYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGS--TKYN 133
Query: 91 AVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLKEQRDLAAEYGVTEEVERL 150
+L E+ L G + G+H ++L + F R+L A+ +EV L
Sbjct: 134 WADLCEDLLGHRPGPKDLH-----GSHVSLAWLRENF-------RNLPAD---PDEV-TL 177
Query: 151 QDQTVRIYLLYLVGITIFTDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY*ELNNA 210
+ T R ++L L+ ++ DKS+ V + +L R+ D V+ SWG A LA LY EL A
Sbjct: 178 KCHT-RAFVLALMSGFLYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRA 236
Query: 211 ARWNCSQMAGYLTLFVYGLYIYTW 234
++ S + G L L L ++ W
Sbjct: 237 SKRTVSTICGPLVL----LQLWAW 256
>At1g50770 hypothetical protein
Length = 632
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 39 LIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEY 98
L+ E W +T +F P+ E T+TL+DV LL + L S F++ D + E++ E
Sbjct: 100 LVLGIAEKWCPDTKTFVFPWGETTITLEDVMLLLGFSV---LGSPVFVTLDSSGEIIREK 156
Query: 99 LESDTGDALIEVDKTKGAHCRFSYLEK 125
LE + +V K KG + ++ E+
Sbjct: 157 LEKEWK----KVKKDKGNATQRTWKER 179
>At1g51545 unknown protein
Length = 629
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 36 DHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFIS---RDEAV 92
+ L+ A VE W ET SF P+ E T+TL+DV LL + + S RD
Sbjct: 28 NQSLLLALVEKWCPETKSFLFPWGEATITLEDVLVLLGFSVQGSPVFAPLESSEMRDSVE 87
Query: 93 ELMEEYLESDTGDALI 108
+L + LE+ D L+
Sbjct: 88 KLEKARLENRGQDGLV 103
>At5g18510 putative protein
Length = 702
Score = 38.5 bits (88), Expect = 0.005
Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 33/217 (15%)
Query: 30 TSYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRD 89
T I+ D I + E W ET SF P+ E T+TL+DV LL + L S
Sbjct: 88 TYKIIKDTSSILSIAEKWCSETKSFIFPWGEATITLEDVMVLLGFSV----LGSPVFSPL 143
Query: 90 EAVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLKEQRDLAAEYGVTEEVER 149
E E+ + LEK+ ++ L + + ++ + + R
Sbjct: 144 ECSEMRDS----------------------AEKLEKVRRDSLGKAKRVSQRSWTSSFMGR 181
Query: 150 LQDQTVRIYLLYLVGITIFTDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY*ELNN 209
+L+ + + +F K ++ + + + A LA LY +L+
Sbjct: 182 GGQMEHEAFLVLWLSLFVFPGKFCRSISTNVIPIAVRLARGERIALAPAVLAFLYKDLDR 241
Query: 210 AARWNCSQMAGYLTLFVYGLYIYTWLSLVQAWVFHHF 246
++ + AG + L + LVQ W + F
Sbjct: 242 ICDFSRGKCAGKVNL-------KSLFKLVQVWTWERF 271
>At4g16050 hypothetical protein
Length = 900
Score = 35.4 bits (80), Expect = 0.040
Identities = 21/61 (34%), Positives = 33/61 (53%), Gaps = 2/61 (3%)
Query: 39 LIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRD--EAVELME 96
LI + + W ET++F P+ E T+TL+DV LL I + S + EAVE ++
Sbjct: 363 LILSLAQNWCPETNTFVFPWGEATITLEDVNVLLGFSISGSSVFASLQSSEMKEAVEKLQ 422
Query: 97 E 97
+
Sbjct: 423 K 423
>At1g50830 hypothetical protein
Length = 768
Score = 34.7 bits (78), Expect = 0.068
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 39 LIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLL 72
LI + E W ET SF P+ E T+TL+DV LL
Sbjct: 119 LILSVSEKWCPETKSFVFPWGEATITLEDVMVLL 152
>At1g50820 hypothetical protein
Length = 528
Score = 34.3 bits (77), Expect = 0.089
Identities = 17/46 (36%), Positives = 24/46 (51%)
Query: 27 LQDTSYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLL 72
+ T I D L+ E W +T +F P+ E T+TL+DV LL
Sbjct: 85 IASTYKIPKDTDLVLGLAEKWCPDTKTFIFPWGEATITLEDVMVLL 130
>At2g07190 hypothetical protein
Length = 452
Score = 33.5 bits (75), Expect = 0.15
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 157 IYLLYLVGITIFTDKSQWAVDVVYLKFFRNIDLVSSFSWGVAALAHLY*ELNNAARWNCS 216
+Y+ + G+ + T +++ +D +Y+K ++ V ++ WG+ A +L NC
Sbjct: 51 VYICVIAGLVMATSETK-KIDHLYIKMVMDLHNVRNYPWGLKAYDNLL---------NCI 100
Query: 217 QMAGYLTLFVYGLYIYTWLSLVQAWVFHHFPGMGS 251
A Y + + +Q WV P +GS
Sbjct: 101 MKAIYALKKTKSYVLDGFSYTLQIWVMEAIPEIGS 135
>At1g32120 hypothetical protein
Length = 1206
Score = 33.5 bits (75), Expect = 0.15
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 LIYAFVEMWHEETSSFHLPFEEITVTLDDVTYL 71
LI A VE W ET++F P+ E T+TL+D+ L
Sbjct: 121 LIVALVEKWCIETNTFVFPWGEATLTLEDMIVL 153
>At1g50790 hypothetical protein
Length = 812
Score = 31.2 bits (69), Expect = 0.75
Identities = 16/46 (34%), Positives = 24/46 (51%)
Query: 27 LQDTSYIMIDHGLIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLL 72
L T I + L+ E W +T++F + E T+TL+DV LL
Sbjct: 89 LASTYKIFKNTDLVMGIAEKWCPDTNTFVFSWGEATITLEDVMVLL 134
>At1g07700 unknown protein
Length = 204
Score = 30.8 bits (68), Expect = 0.98
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 85 FISRDEAVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLKEQRDLAA----- 139
F + DE + ++E+ E+++ L+ VD + A Y+E+ F + K+ D A
Sbjct: 90 FKTDDELLSVLEKSKETNS---LVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFL 146
Query: 140 ------EYGVTEEV-ERLQDQTVRIYLLYLVGITI--FTDKSQWAVDVVYLKF 183
EY EV ERL+ + V ++ Y G+ + F + + +D LK+
Sbjct: 147 KHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKY 199
>At3g53480 ABC transporter - like protein
Length = 1450
Score = 30.0 bits (66), Expect = 1.7
Identities = 11/29 (37%), Positives = 18/29 (61%)
Query: 49 EETSSFHLPFEEITVTLDDVTYLLHIPID 77
EE LPF+ +TVT D+ Y + +P++
Sbjct: 836 EEEDKMVLPFKPLTVTFQDLNYFVDMPVE 864
>At2g37280 putative ABC transporter
Length = 1413
Score = 29.3 bits (64), Expect = 2.9
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 48 HEETSSFHLPFEEITVTLDDVTYLLHIPID 77
+E+ LPF+ +T+T D+ Y + +P++
Sbjct: 798 NEDPGKMILPFKPLTITFQDLNYYVDVPVE 827
>At1g77580 unknown protein
Length = 779
Score = 29.3 bits (64), Expect = 2.9
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 73 HIPIDDMLLSHGFISRDEAVELMEEYLESDTGDALIEVDKTKGAHCRFSYLEKIFKECLK 132
H+ + + ++ + +E VEL E+ +D DK + R S+L+ KEC++
Sbjct: 86 HVKVAEEAVAGWEKAENEVVELKEKLEAAD--------DKNRVLEDRVSHLDGALKECVR 137
Query: 133 EQRDLAAEYGVTEEVERLQDQTV 155
+ R E+ +R+QD +
Sbjct: 138 QLRQAR-----DEQEQRIQDAVI 155
>At1g47320 hypothetical protein
Length = 259
Score = 29.3 bits (64), Expect = 2.9
Identities = 20/67 (29%), Positives = 30/67 (43%), Gaps = 2/67 (2%)
Query: 38 GLIYAFVEMWHEETSSFHLPFE-EITVTLDDVTYLLHIPIDDML-LSHGFISRDEAVELM 95
G Y W ++S L + EI V H P+ ++ L HGFIS+D V +
Sbjct: 149 GAYYGLYLAWERKSSHIELEVDSEIVVGFLKTGISDHHPLSFLVRLCHGFISKDWRVRIF 208
Query: 96 EEYLESD 102
Y E++
Sbjct: 209 HVYREAN 215
>At4g09410 putative protein
Length = 673
Score = 28.9 bits (63), Expect = 3.7
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 127 FKECLKEQRDLAAEYGVTEEVERLQDQTVRIYLLYLVGITIFTDKSQWAVDVVYLKFFRN 186
+ L+E+++++ +G EVE D + +L +G +I K+ V V+Y F +
Sbjct: 308 YSTALREKKNMSVNHGTITEVELDADDMFK-FLFIALGASIERFKAMRKVIVIYATFLKT 366
Query: 187 I 187
I
Sbjct: 367 I 367
>At1g50760 hypothetical protein
Length = 649
Score = 28.9 bits (63), Expect = 3.7
Identities = 18/63 (28%), Positives = 31/63 (48%), Gaps = 3/63 (4%)
Query: 39 LIYAFVEMWHEETSSFHLPFEEITVTLDDVTYLLHIPIDDMLLSHGFISRDEAVELMEEY 98
L+ E W +T +F + E T+TL+DV L + L S F + D + + + E
Sbjct: 90 LVLGVAEKWSPDTKTFVFSWGEATITLEDVMVLSGFSV---LGSPAFATLDSSGKKIMER 146
Query: 99 LES 101
L++
Sbjct: 147 LKN 149
>At5g62970 putative protein
Length = 449
Score = 28.5 bits (62), Expect = 4.9
Identities = 25/101 (24%), Positives = 44/101 (42%), Gaps = 3/101 (2%)
Query: 123 LEKIFKECLKEQRDLAAEYGVTEEVERLQDQTVRIYLLYLVGITIFTDKSQWAVDVVYLK 182
L+++ C DL E + V +L D + L G++ + + +D LK
Sbjct: 194 LQRLLSNC-SVLEDLVVELDTGDNVRKL-DVIIPSLLSLSFGMSRYCAYEGYRIDTPSLK 251
Query: 183 FFRNIDLVSSFSWGVAALAHLY*ELNNAARWNCSQMAGYLT 223
+F+ DL +FS + + L E N AR N ++ +T
Sbjct: 252 YFKLTDLSKTFSGLIENMPKLE-EANITARHNFKKLLELVT 291
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.326 0.140 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,080,812
Number of Sequences: 26719
Number of extensions: 301134
Number of successful extensions: 901
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 880
Number of HSP's gapped (non-prelim): 28
length of query: 311
length of database: 11,318,596
effective HSP length: 99
effective length of query: 212
effective length of database: 8,673,415
effective search space: 1838763980
effective search space used: 1838763980
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144893.1