BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144721.10 + phase: 0 /pseudo
(813 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31210 putative reverse transcriptase 386 e-107
At4g27210 putative protein 384 e-107
At1g53810 374 e-103
At4g10690 retrotransposon like protein 367 e-101
At1g44510 polyprotein, putative 360 2e-99
At1g59265 polyprotein, putative 358 5e-99
At1g58889 polyprotein, putative 358 5e-99
At4g16870 retrotransposon like protein 358 9e-99
At4g02960 putative polyprotein of LTR transposon 357 1e-98
At4g27200 putative protein 350 2e-96
At2g04820 putative retroelement pol polyprotein 345 6e-95
At2g20460 putative retroelement pol polyprotein 340 2e-93
At1g34090 putative protein 318 1e-86
At1g70010 hypothetical protein 315 8e-86
At2g16000 putative retroelement pol polyprotein 312 5e-85
At2g23330 putative retroelement pol polyprotein 311 7e-85
At1g47650 hypothetical protein 311 7e-85
At4g10990 putative retrotransposon polyprotein 311 9e-85
At2g15870 putative retroelement pol polyprotein 311 9e-85
At1g58140 hypothetical protein 309 4e-84
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 386 bits (992), Expect = e-107
Identities = 192/376 (51%), Positives = 248/376 (65%), Gaps = 2/376 (0%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D P HVC L K++YGLKQAPRAW+ F++FL GFV SK+D SLF+ Y+L
Sbjct: 992 DPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLL 1051
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
LYVDDI+LT S SL + ++ AL++ FS+ DLGP YFLG+ ++ GLFLHQ+ YA D
Sbjct: 1052 LYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATD 1111
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
I+ +A M +C P TP+ +L + E F + T +RSLAG LQYLT TRPDI +AV
Sbjct: 1112 ILQQAGMSDCNPMPTPLP--QQLDNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNF 1169
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
IC MH P TS F LKRI+RYI+GT GL + ++ LSAYSD+D GC +TRRST+
Sbjct: 1170 ICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTT 1229
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
G+C+ LG NLISWSAKRQ T+S SS EAEYR + E W+ LL +L P T V
Sbjct: 1230 GFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQV 1289
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDN+SA+YLS NP H R+KH + D H++RE+VALG + H+ +Q AD+FTK LP+
Sbjct: 1290 YCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPR 1349
Query: 798 PLFDEFRSSLSIHPPP 813
F + RS L + P
Sbjct: 1350 RAFVDLRSKLGVSGSP 1365
>At4g27210 putative protein
Length = 1318
Score = 384 bits (987), Expect = e-107
Identities = 185/376 (49%), Positives = 245/376 (64%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D + PDHVCLL KS+YGLKQ+PRAW+ +F++FL GF SK+D SLFI H ++ +L
Sbjct: 846 DPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLILLL 905
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
LYVDD+++T +S +++AAL EF +TD+G L+YFLG+ R GLF+ Q KYAED
Sbjct: 906 LYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGLFMSQQKYAED 965
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++ A M +C P TP+ + E F D T +RS+AG LQYLT TRPDI +AV
Sbjct: 966 LLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNF 1025
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+C MH P S F LKRI+RYI+GT G+ S + T L AYSD+DWG C TRRS
Sbjct: 1026 VCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVG 1085
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
G C ++G NL+SWS+K+ T+SRSS EAEY+ +++ +E WL LL EL P+ +
Sbjct: 1086 GLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPEL 1145
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
+CDN+SA+YL+ NP H RTKH ++D HFVRE+VAL + V H+P Q ADIFTK LP
Sbjct: 1146 FCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTKSLPY 1205
Query: 798 PLFDEFRSSLSIHPPP 813
F R L + P
Sbjct: 1206 EAFIHLRGKLGVTLSP 1221
>At1g53810
Length = 1522
Score = 374 bits (960), Expect = e-103
Identities = 179/385 (46%), Positives = 250/385 (64%), Gaps = 9/385 (2%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ PDHVCLL KSLYGLKQ+PRAW+ RF++FL GF+ S D SLF+ + +D +L
Sbjct: 1048 DKSKPDHVCLLHKSLYGLKQSPRAWFDRFSNFLLEFGFICSLFDPSLFVYSSNNDVILLL 1107
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
LYVDD+++T ++ ++AAL EF + D+G ++YFLG+ + GGLF+ Q KYAED
Sbjct: 1108 LYVDDMVITGNNSQSLTHLLAALNKEFRMKDMGQVHYFLGIQIQTYDGGLFMSQQKYAED 1167
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++ A M NC P TP+ + + E F D T +RSLAG LQYLT TRPDI +AV
Sbjct: 1168 LLITASMANCSPMPTPLPLQLDRVSNQDEVFSDPTYFRSLAGKLQYLTLTRPDIQFAVNF 1227
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVT---------NLSAYSDADWGG 668
+C MH P S F LKRI+RYI+GT G+ + ++ + +LSAYSD+D+
Sbjct: 1228 VCQKMHQPSVSDFNLLKRILRYIKGTVSMGIQYNSNSSSVVSAYESDYDLSAYSDSDYAN 1287
Query: 669 CPDTRRSTSGYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELH 728
C +TRRS GYC ++G N+ISWS+K+Q T+SRSS EAEYR ++ +E W+ ++L E+
Sbjct: 1288 CKETRRSVGGYCTFMGQNIISWSSKKQPTVSRSSTEAEYRSLSETASEIKWMSSILREIG 1347
Query: 729 CPISKATVVYCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYA 788
+ ++CDN+SA+YL+ NP H RTKH ++D H++RE+VAL + V H+P Q A
Sbjct: 1348 VSLPDTPELFCDNLSAVYLTANPAFHARTKHFDVDHHYIRERVALKTLVVKHIPGHLQLA 1407
Query: 789 DIFTKGLPKPLFDEFRSSLSIHPPP 813
DIFTK LP F R L + PP
Sbjct: 1408 DIFTKSLPFEAFTRLRFKLGVDFPP 1432
>At4g10690 retrotransposon like protein
Length = 1515
Score = 367 bits (942), Expect = e-101
Identities = 181/376 (48%), Positives = 248/376 (65%), Gaps = 2/376 (0%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D + PD+VC LKK++Y LKQAPRAW+ +F+S+L GF+ S +D SLF+ G D ++L
Sbjct: 1052 DPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMFLL 1111
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
LYVDD+ILT ++ L ++ L +EF + D+G L+YFLG+ A H+ GLFL Q KY D
Sbjct: 1112 LYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQAHYHNDGLFLSQEKYTSD 1171
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++ A M +C TP+ L + + F + T +R LAG LQYLT TRPDI +AV
Sbjct: 1172 LLVNAGMSDCSSMPTPLQLD--LLQGNNKPFPEPTYFRRLAGKLQYLTLTRPDIQFAVNF 1229
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+C MH P S F LKRI+ Y++GT G++LS +T + L YSD+DW GC DTRRST
Sbjct: 1230 VCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSSNTDSVLRCYSDSDWAGCKDTRRSTG 1289
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
G+C +LG N+ISWSAKR T+S+SS EAEYR ++ +E W+ LL E+ P + +
Sbjct: 1290 GFCTFLGYNIISWSAKRHPTVSKSSTEAEYRTLSFAASEVSWIGFLLQEIGLPQQQIPEM 1349
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDN+SA+YLS NP H R+KH ++D ++VRE+VALG + V H+P Q ADIFTK LP+
Sbjct: 1350 YCDNLSAVYLSANPALHSRSKHFQVDYYYVRERVALGALTVKHIPASQQLADIFTKSLPQ 1409
Query: 798 PLFDEFRSSLSIHPPP 813
F + R L + PP
Sbjct: 1410 APFCDLRFKLGVVLPP 1425
>At1g44510 polyprotein, putative
Length = 1459
Score = 360 bits (924), Expect = 2e-99
Identities = 176/376 (46%), Positives = 240/376 (63%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ P HVC L+K++YGLKQAPRAWY L IGFVNS D SLFI +HG Y+L
Sbjct: 1082 DKDRPSHVCRLRKAIYGLKQAPRAWYMELKQHLLNIGFVNSLADTSLFIYSHGTTLLYLL 1141
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDII+T S H ++++L FS+ D L+YFLG+ ATR + GL L Q KY D
Sbjct: 1142 VYVDDIIVTGSDHKSVSAVLSSLAERFSIKDPTDLHYFLGIEATRTNTGLHLMQRKYMTD 1201
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++++ M++ KP TP+ T KL+ G K +D++ YRS+ G+LQYL FTRPDI++AV +
Sbjct: 1202 LLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDIAFAVNR 1261
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ +MH P + H+ A KR++RY+ GT G+ L+ S+ +L A+SDADW G ST+
Sbjct: 1262 LSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFSDADWAGDSADYVSTN 1321
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
Y +YLG N ISWS+K+Q +SRSS E+EYR VAN +E WL +LL ELH + +
Sbjct: 1322 AYVIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCSLLTELHIRLPHGPTI 1381
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
+CDN+ A Y+ NPV H R KHI +D HFVR + + V HV T Q AD TK L +
Sbjct: 1382 FCDNIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVSTNDQLADALTKSLSR 1441
Query: 798 PLFDEFRSSLSIHPPP 813
P F RS + + P
Sbjct: 1442 PHFLSARSKIGVRQLP 1457
>At1g59265 polyprotein, putative
Length = 1466
Score = 358 bits (920), Expect = 5e-99
Identities = 181/376 (48%), Positives = 236/376 (62%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ P++VC L+K+LYGLKQAPRAWY ++L TIGFVNS +D SLF+ G Y+L
Sbjct: 1089 DKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYML 1148
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDI++T + +L + L FS+ D L+YFLG+ A R GL L Q +Y D
Sbjct: 1149 VYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILD 1208
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
+++R M+ KP TP+ KLS SG K D T YR + G+LQYL FTRPDISYAV +
Sbjct: 1209 LLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNR 1268
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ +MH P H ALKRI+RY+ GT G+ L +L AYSDADW G D ST+
Sbjct: 1269 LSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTN 1328
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
GY VYLG + ISWS+K+Q + RSS EAEYR VAN +E W+ +LL EL +++ V+
Sbjct: 1329 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVI 1388
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDNV A YL NPV H R KHI +D HF+R +V G + V+HV T Q AD TK L +
Sbjct: 1389 YCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1448
Query: 798 PLFDEFRSSLSIHPPP 813
F F S + + P
Sbjct: 1449 TAFQNFASKIGVTRVP 1464
>At1g58889 polyprotein, putative
Length = 1466
Score = 358 bits (920), Expect = 5e-99
Identities = 181/376 (48%), Positives = 236/376 (62%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ P++VC L+K+LYGLKQAPRAWY ++L TIGFVNS +D SLF+ G Y+L
Sbjct: 1089 DKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYML 1148
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDI++T + +L + L FS+ D L+YFLG+ A R GL L Q +Y D
Sbjct: 1149 VYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILD 1208
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
+++R M+ KP TP+ KLS SG K D T YR + G+LQYL FTRPDISYAV +
Sbjct: 1209 LLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNR 1268
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ +MH P H ALKRI+RY+ GT G+ L +L AYSDADW G D ST+
Sbjct: 1269 LSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTN 1328
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
GY VYLG + ISWS+K+Q + RSS EAEYR VAN +E W+ +LL EL +++ V+
Sbjct: 1329 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVI 1388
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDNV A YL NPV H R KHI +D HF+R +V G + V+HV T Q AD TK L +
Sbjct: 1389 YCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1448
Query: 798 PLFDEFRSSLSIHPPP 813
F F S + + P
Sbjct: 1449 TAFQNFASKIGVTRVP 1464
>At4g16870 retrotransposon like protein
Length = 1474
Score = 358 bits (918), Expect = 9e-99
Identities = 178/376 (47%), Positives = 237/376 (62%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ P HVC L+K++YGLKQAPRAWY L IGFVNS +D SLFI HG Y+L
Sbjct: 1097 DKDRPTHVCRLRKAIYGLKQAPRAWYMELKQHLFNIGFVNSLSDASLFIYCHGTTFVYVL 1156
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDII+T S S D ++ +L FS+ D L+YFLG+ ATR GL L Q KY +D
Sbjct: 1157 VYVDDIIVTGSDKSSIDAVLTSLAERFSIKDPTDLHYFLGIEATRTKQGLHLMQRKYIKD 1216
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++++ M + KP LTP+ T KL+ G K +D++ YRS+ G+LQYL FTRPDI+YAV +
Sbjct: 1217 LLAKHNMADAKPVLTPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDIAYAVNR 1276
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ M P H+ A KR++RY+ GT G+ L ++ NL A+SDADW G D ST+
Sbjct: 1277 LSQLMPQPTEDHWQAAKRVLRYLAGTSTHGIFLDTTSPLNLHAFSDADWAGDSDDYVSTN 1336
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
Y +YLG N ISWS+K+Q ++RSS E+EYR VAN +E WL +LL +LH + +
Sbjct: 1337 AYVIYLGKNPISWSSKKQRGVARSSTESEYRAVANAASEVKWLCSLLSKLHIRLPIRPSI 1396
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
+CDN+ A YL NPV H R KHI +D HFVR + G + V HV TR Q AD TK L +
Sbjct: 1397 FCDNIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPLSR 1456
Query: 798 PLFDEFRSSLSIHPPP 813
F R + + P
Sbjct: 1457 AHFQSARFKIGVRQLP 1472
>At4g02960 putative polyprotein of LTR transposon
Length = 1456
Score = 357 bits (916), Expect = 1e-98
Identities = 179/376 (47%), Positives = 237/376 (62%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
D++ PD+VC L+K++YGLKQAPRAWY ++L T+GFVNS +D SLF+ G Y+L
Sbjct: 1072 DKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1131
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDI++T + L + AL FS+ + L+YFLG+ A R GL L Q +Y D
Sbjct: 1132 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1191
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
+++R M+ KP TP+ T KL+ SG K D T YR + G+LQYL FTRPD+SYAV +
Sbjct: 1192 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1251
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ YMH P H+ ALKR++RY+ GT + G+ L +L AYSDADW G D ST+
Sbjct: 1252 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTN 1311
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
GY VYLG + ISWS+K+Q + RSS EAEYR VAN +E W+ +LL EL +S V+
Sbjct: 1312 GYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVI 1371
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDNV A YL NPV H R KHI +D HF+R +V G + V+HV T Q AD TK L +
Sbjct: 1372 YCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSR 1431
Query: 798 PLFDEFRSSLSIHPPP 813
F F + + P
Sbjct: 1432 VAFQNFSRKIGVIKVP 1447
>At4g27200 putative protein
Length = 819
Score = 350 bits (898), Expect = 2e-96
Identities = 178/374 (47%), Positives = 234/374 (61%), Gaps = 12/374 (3%)
Query: 441 NPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYV 500
N DHVCLL KS+YGLKQ+PRAW+ +F++FL GF K+D SLFI H ++ +LL
Sbjct: 360 NRDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCRKSDPSLFIYAHNNNLILLLL-- 417
Query: 501 DDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNY-FLGVSATRHSGGLFLHQSKYAEDII 559
S +L +++AAL EF +TD+G + FLG+ R GLF+ Q KYAED++
Sbjct: 418 --------SQTLT-SLLAALNKEFRMTDMGQHSLTFLGIQVQRQQNGLFMSQQKYAEDLL 468
Query: 560 SRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQIC 619
A M +C P TP+ + E F D T +RS+AG LQYLT TRPDI +AV +C
Sbjct: 469 IAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNFVC 528
Query: 620 LYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGY 679
MH P S F LKRI+RYI+GT G+ S + T L AYSD+DWG C TRRS G
Sbjct: 529 QKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVGGL 588
Query: 680 CVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYC 739
C ++G NL+SWS+K+ T+SRSS EAEY+ +++ +E WL LL EL P+ ++C
Sbjct: 589 CTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFC 648
Query: 740 DNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPL 799
DN+SA+YL+ NP H RTKH ++D HFVRE+VAL + V H+P Q ADIFTK LP
Sbjct: 649 DNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTKSLPYEA 708
Query: 800 FDEFRSSLSIHPPP 813
F R L + PP
Sbjct: 709 FIHLRGKLGVTLPP 722
>At2g04820 putative retroelement pol polyprotein
Length = 387
Score = 345 bits (885), Expect = 6e-95
Identities = 175/376 (46%), Positives = 231/376 (60%), Gaps = 1/376 (0%)
Query: 438 DRNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYIL 497
DR+ P HVC L K+LYGLKQAPRAWYQ ++L GF NS D SLFI + Y+L
Sbjct: 11 DRDRPTHVCRLNKALYGLKQAPRAWYQELRNYLLAAGFTNSLADTSLFIYKRANSYLYVL 70
Query: 498 LYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAED 557
+YVDDII+T + SL +L FSL DLG L+YFLG+ ATR GL L Q KY D
Sbjct: 71 VYVDDIIITGDA-SLVKNFNVSLADRFSLKDLGALSYFLGIEATRTKKGLHLMQRKYITD 129
Query: 558 IISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQ 617
++++ M++ KP TP+ T KLS SG DD+ YR + G+LQYL+FTRPDI++ V +
Sbjct: 130 LLAKTHMLDAKPISTPMATTPKLSLHSGTILDDAKEYRMIIGSLQYLSFTRPDIAFVVNR 189
Query: 618 ICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTS 677
+ +MH P H+ A KR++RY+ GTK G+ L + ++SDADW G ST+
Sbjct: 190 LSQFMHKPTDEHWQAAKRVLRYLAGTKSHGIFLRSDAPLTVHSFSDADWAGDLGDGLSTN 249
Query: 678 GYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVV 737
Y VY G + ISWS+K+Q SRSS EAEYR VAN +E W+ +LL E+ + A VV
Sbjct: 250 AYIVYFGGSPISWSSKKQRRFSRSSTEAEYRAVANTASELQWICSLLSEMGISLPVAPVV 309
Query: 738 YCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPK 797
YCDN+ A YL NPV H + KH+ +D HFVR + G + V H+ T+ Q AD TK L +
Sbjct: 310 YCDNMGATYLCANPVFHSKMKHVALDYHFVRGNIQTGALRVSHLSTKDQLADALTKPLHR 369
Query: 798 PLFDEFRSSLSIHPPP 813
P F E + + P
Sbjct: 370 PRFQELNYKIGVKELP 385
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 340 bits (871), Expect = 2e-93
Identities = 168/368 (45%), Positives = 241/368 (64%), Gaps = 1/368 (0%)
Query: 442 PDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYVD 501
P+ VC LKKS+YGLKQA R W+ +F++ L +GF DH+LF+ G + +L+YVD
Sbjct: 1087 PNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVD 1146
Query: 502 DIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIISR 561
DI++ +++ ++ AL++ F L +LGPL YFLG+ R S G+ L Q KYA ++++
Sbjct: 1147 DIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTS 1206
Query: 562 AKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICLY 621
A M++CKP+ P+ +LS G +D +YR L G L YLT TRPDI++AV ++C +
Sbjct: 1207 ADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQF 1266
Query: 622 MHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYCV 681
PRT+H AA+ ++++YI+GT GL S L Y+DADWG CPD+RRST+G+ +
Sbjct: 1267 SSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTM 1326
Query: 682 YLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCDN 741
++G +LISW +K+Q T+SRSSAEAEYR +A E WL LLL L S ++Y D+
Sbjct: 1327 FVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVH-SGVPILYSDS 1385
Query: 742 VSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPLFD 801
+A+Y++ NPV H+RTKHIE+D H VREK+ GQ+ +LHV T+ Q ADI TK L F
Sbjct: 1386 TAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFA 1445
Query: 802 EFRSSLSI 809
S +SI
Sbjct: 1446 HLLSKMSI 1453
>At1g34090 putative protein
Length = 761
Score = 318 bits (814), Expect = 1e-86
Identities = 153/330 (46%), Positives = 211/330 (63%)
Query: 478 SKTDHSLFISTHGDDTTYILLYVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLG 537
S++D SLF+ D +LLYVDD+ +T +S + ++ L +F + D+G L+YFLG
Sbjct: 309 SQSDPSLFVYIKNKDIILLLLYVDDMAITGNSSTALSNLLDELNKQFRMKDMGKLHYFLG 368
Query: 538 VSATRHSGGLFLHQSKYAEDIISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSL 597
+ A HSGGLFL Q KY ED++ A M +C P TP+ + E+F D +RSL
Sbjct: 369 IQAHYHSGGLFLSQQKYVEDLLITASMADCAPMPTPLPLQLNKVPNQDEQFSDQRYFRSL 428
Query: 598 AGALQYLTFTRPDISYAVQQICLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTN 657
AG LQYLT TRPDI +AV +C MH P S + LKRI+RY++GT G+ + T
Sbjct: 429 AGKLQYLTLTRPDIQFAVNYVCQKMHSPTVSDYHLLKRILRYVKGTTTMGISFAKDTDCT 488
Query: 658 LSAYSDADWGGCPDTRRSTSGYCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAES 717
+ AYSD+D+GGC TRRST+G+C + G N+ISW +++Q T++RSS EAEYR +++ AE
Sbjct: 489 VRAYSDSDYGGCKRTRRSTAGFCTFFGSNIISWCSQKQETVARSSTEAEYRALSDAAAEI 548
Query: 718 CWLRNLLLELHCPISKATVVYCDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVH 777
WL +L EL P+ A +Y DN+S+IYL+ NP H+R+KH E H+VRE+VALG +
Sbjct: 549 TWLCKVLKELQIPLHTAPELYADNLSSIYLTANPSFHKRSKHFETHYHYVRERVALGSLT 608
Query: 778 VLHVPTRYQYADIFTKGLPKPLFDEFRSSL 807
V H+P+ Q ADIFTK LP F R L
Sbjct: 609 VKHIPSHVQLADIFTKSLPVGAFTTLRFKL 638
>At1g70010 hypothetical protein
Length = 1315
Score = 315 bits (806), Expect = 8e-86
Identities = 157/368 (42%), Positives = 228/368 (61%)
Query: 442 PDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYVD 501
P+ VC LKKSLYGLKQA R WY +F+S L +GF+ S DH+ F+ +L+Y+D
Sbjct: 941 PNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYID 1000
Query: 502 DIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIISR 561
DII+ +++ + D + + ++S F L DLG L YFLG+ R G+ + Q KYA D++
Sbjct: 1001 DIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDE 1060
Query: 562 AKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICLY 621
+ CKP+ P+D + SG F + YR L G L YL TRPDI++AV ++ +
Sbjct: 1061 TGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQF 1120
Query: 622 MHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYCV 681
PR +H A+ +I++YI+GT GL S ++ L Y++AD+ C D+RRSTSGYC+
Sbjct: 1121 SMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCM 1180
Query: 682 YLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCDN 741
+LGD+LI W +++Q +S+SSAEAEYR ++ E WL N L EL P+SK T+++CDN
Sbjct: 1181 FLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDN 1240
Query: 742 VSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPLFD 801
+AI+++ N V H+RTKHIE D H VRE++ G + H+ T Q AD FTK L F
Sbjct: 1241 EAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFH 1300
Query: 802 EFRSSLSI 809
S + +
Sbjct: 1301 RLISKMGL 1308
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 312 bits (799), Expect = 5e-85
Identities = 155/369 (42%), Positives = 233/369 (63%), Gaps = 2/369 (0%)
Query: 442 PDHVCL-LKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYV 500
P +V L LK+S+YGLKQA R W+++F+S L ++GF + DH+LF+ + + +L+YV
Sbjct: 1079 PSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYV 1138
Query: 501 DDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIIS 560
DDI++ ++S + + L F L DLG L YFLG+ R + G+ + Q KYA +++
Sbjct: 1139 DDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQ 1198
Query: 561 RAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICL 620
M+ CKP P+ K+ G+ +D YR + G L YLT TRPDI++AV ++C
Sbjct: 1199 STGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQ 1258
Query: 621 YMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYC 680
+ PRT+H A R+++YI+GT GL S S+ L ++D+DW C D+RRST+ +
Sbjct: 1259 FSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFT 1318
Query: 681 VYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCD 740
+++GD+LISW +K+Q T+SRSSAEAEYR +A E WL LL+ L ++Y D
Sbjct: 1319 MFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQAS-PPVPILYSD 1377
Query: 741 NVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPLF 800
+ +AIY++ NPV H+RTKHI++D H VRE++ G++ +LHV T Q ADI TK L F
Sbjct: 1378 STAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQF 1437
Query: 801 DEFRSSLSI 809
+ +S +SI
Sbjct: 1438 EHLKSKMSI 1446
>At2g23330 putative retroelement pol polyprotein
Length = 1496
Score = 311 bits (798), Expect = 7e-85
Identities = 158/370 (42%), Positives = 226/370 (60%)
Query: 440 NNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLY 499
++P VC L+KSLYGLKQAPR W+ + ++ L IGF S D+SLF +GD ++L+Y
Sbjct: 1120 SDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVY 1179
Query: 500 VDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDII 559
VDD+I+ ++ D + L F + DLG L YFLG+ +R G L Q KYA DI+
Sbjct: 1180 VDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIV 1239
Query: 560 SRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQIC 619
++ CKP+ P+ KL++ +G F + YR L G YLT TRPD+SYAV +
Sbjct: 1240 KETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILS 1299
Query: 620 LYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGY 679
+M P +H+ A R++RY++G+ G+ L + ++AY D+D+ CP TRRS S Y
Sbjct: 1300 QFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAY 1359
Query: 680 CVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYC 739
VYLGD+ ISW K+Q T+S SSAEAEYR +A + E WL+ LL +L S ++C
Sbjct: 1360 VVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHC 1419
Query: 740 DNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPL 799
D+ +AI+++ NPV H+RTKHIE D H VR+ V + H+ T Q AD+ TK LP+P
Sbjct: 1420 DSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPT 1479
Query: 800 FDEFRSSLSI 809
F+ S+L +
Sbjct: 1480 FERLLSTLGV 1489
>At1g47650 hypothetical protein
Length = 1409
Score = 311 bits (798), Expect = 7e-85
Identities = 153/345 (44%), Positives = 220/345 (63%), Gaps = 1/345 (0%)
Query: 442 PDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYVD 501
P+ VC LK+S+YGLKQA R W+++F++ L +GF + DH+LFI + + +L+YVD
Sbjct: 871 PNSVCRLKRSIYGLKQASRQWFKKFSASLLDLGFKKTHGDHTLFIKEYDGEFVIVLVYVD 930
Query: 502 DIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIISR 561
DI + ++S + L+ F L DLG L YFLG+ R G+ + Q KYA ++++
Sbjct: 931 DIAIASTSEGAAIQLTQDLQQRFKLRDLGDLKYFLGLEIARTEAGISICQRKYALELLAS 990
Query: 562 AKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICLY 621
MVNCKP P+ K+ T G+ DD YR + G L YLT TR DI++AV ++C +
Sbjct: 991 TGMVNCKPVSVPMIPNVKMMKTDGDLLDDREQYRRIVGKLMYLTITRLDITFAVNKLCQF 1050
Query: 622 MHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYCV 681
PRTSH A R+++YI+G+ GL S S L ++D+DW CPD+RRST+G+ +
Sbjct: 1051 SSAPRTSHLQAAYRVLQYIKGSVGQGLFYSASADLTLKGFADSDWASCPDSRRSTTGFSM 1110
Query: 682 YLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCDN 741
++GD+LISW +K+Q +SRSSAEAEYR +A V E WL LL+ L V+Y D+
Sbjct: 1111 FVGDSLISWRSKKQHVVSRSSAEAEYRALALVTCELVWLHTLLMSLKASY-LVPVLYSDS 1169
Query: 742 VSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQ 786
+AIY++ NPV H+RTKHIE+D H VREK+ G++ +LHV T Q
Sbjct: 1170 TTAIYIATNPVFHERTKHIELDCHTVREKLDNGELKLLHVRTEDQ 1214
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 311 bits (797), Expect = 9e-85
Identities = 149/351 (42%), Positives = 221/351 (62%)
Query: 445 VCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYVDDII 504
VC L KSLYGLKQA R WY+R +S F+ S D+++F+ +L+YVDD++
Sbjct: 668 VCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLM 727
Query: 505 LTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIISRAKM 564
+ ++ S + + LRSEF + DLGP +FLG+ R S G+ + Q KYA++++ +
Sbjct: 728 IASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGL 787
Query: 565 VNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICLYMHD 624
CKP+ P+D L+ G ++T YR L G L YL TRPDI++AV + ++
Sbjct: 788 SGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSA 847
Query: 625 PRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYCVYLG 684
P H A +++RY++G GL S S+ L+ +SDADWG C D+RRS +G+C+YLG
Sbjct: 848 PTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLG 907
Query: 685 DNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCDNVSA 744
+LI+W +K+Q+ +SRSS E+EYR +A E WL+ LL +LH ++ ++CDN SA
Sbjct: 908 TSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSA 967
Query: 745 IYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGL 795
++L+ NPV H+RTKHIE+D H VR+++ G++ LHVPT Q ADI TK L
Sbjct: 968 LHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPL 1018
>At2g15870 putative retroelement pol polyprotein
Length = 1264
Score = 311 bits (797), Expect = 9e-85
Identities = 155/365 (42%), Positives = 232/365 (63%), Gaps = 1/365 (0%)
Query: 445 VCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILLYVDDII 504
VC LK+S+YGLKQA R W+++F++ L ++ F + DH+LF+ G + +L+YVDDI+
Sbjct: 893 VCRLKRSIYGLKQASRQWFKKFSASLLSLRFFKTHGDHTLFLKDCGGEYVVVLVYVDDIV 952
Query: 505 LTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDIISRAKM 564
+ +++ + + L++ F L DLG L YFLG+ TR G+ L Q KYA ++++ M
Sbjct: 953 IASTNEAAAVQLSQDLQNLFKLRDLGDLKYFLGLEITRTEAGISLCQRKYALELLASTGM 1012
Query: 565 VNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQICLYMHD 624
+NCK P+ KL GE +D YR + G L YLT TRPDI++AV ++C + +
Sbjct: 1013 INCKLVSVPMVPNLKLMKVDGELLEDREQYRRIVGTLMYLTITRPDITFAVNKLCQFSYA 1072
Query: 625 PRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSGYCVYLG 684
P T+H A R+++YI+GT GL S S+ L ++D+DW CPD+R ST+G+ +++G
Sbjct: 1073 PTTAHLQAAHRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCPDSRHSTTGFTMFVG 1132
Query: 685 DNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVYCDNVSA 744
D+LIS +K+Q +SRSSAEAEYR +A E WL LL L + +++ D+ +A
Sbjct: 1133 DSLISLRSKKQHVVSRSSAEAEYRALALATCELVWLHTLLASL-TAATTIPILFSDSTAA 1191
Query: 745 IYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKPLFDEFR 804
IY++ NPV H+RTKHIE+D H VREK+ G++ +LHV T Q ADI TK L F+ +
Sbjct: 1192 IYIAINPVFHERTKHIEIDCHTVREKIDDGELKLLHVRTEDQVADIMTKPLFPNQFEHLK 1251
Query: 805 SSLSI 809
S +SI
Sbjct: 1252 SKMSI 1256
>At1g58140 hypothetical protein
Length = 1320
Score = 309 bits (792), Expect = 4e-84
Identities = 157/371 (42%), Positives = 225/371 (60%)
Query: 439 RNNPDHVCLLKKSLYGLKQAPRAWYQRFASFLSTIGFVNSKTDHSLFISTHGDDTTYILL 498
+ D V LKK+LYGLKQAPRAW R + F+ +H+L+I +D L
Sbjct: 939 KGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACL 998
Query: 499 YVDDIILTTSSHSLRDTIIAALRSEFSLTDLGPLNYFLGVSATRHSGGLFLHQSKYAEDI 558
YVDD+I T ++ S+ + + EF +TD+G ++Y+LG+ + G+F+ Q YA+++
Sbjct: 999 YVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEV 1058
Query: 559 ISRAKMVNCKPALTPVDTKSKLSATSGEKFDDSTLYRSLAGALQYLTFTRPDISYAVQQI 618
+ + KM + P TP++ KLS + D T ++SL G+L+YLT TRPDI YAV +
Sbjct: 1059 LKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVV 1118
Query: 619 CLYMHDPRTSHFAALKRIIRYIQGTKEFGLHLSPSTVTNLSAYSDADWGGCPDTRRSTSG 678
YM P T+HF A KRI+RYI+GT FGLH S ++ L YSD+DWGG D R+STSG
Sbjct: 1119 SRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSG 1178
Query: 679 YCVYLGDNLISWSAKRQATLSRSSAEAEYRGVANVVAESCWLRNLLLELHCPISKATVVY 738
+ Y+GD +W +K+Q ++ S+ EAEY + V + WLRNLL EL P + T ++
Sbjct: 1179 FVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIF 1238
Query: 739 CDNVSAIYLSGNPVNHQRTKHIEMDIHFVREKVALGQVHVLHVPTRYQYADIFTKGLPKP 798
DN SAI L+ NPV H R+KHI+ H++RE V+ V + +V T Q ADIFTK L +
Sbjct: 1239 VDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKRE 1298
Query: 799 LFDEFRSSLSI 809
F + RS L +
Sbjct: 1299 DFIKMRSLLGV 1309
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.333 0.143 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,579,251
Number of Sequences: 26719
Number of extensions: 737970
Number of successful extensions: 2609
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2345
Number of HSP's gapped (non-prelim): 161
length of query: 813
length of database: 11,318,596
effective HSP length: 107
effective length of query: 706
effective length of database: 8,459,663
effective search space: 5972522078
effective search space used: 5972522078
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 64 (29.3 bits)
Medicago: description of AC144721.10