BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144618.2 + phase: 0
(106 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48290 ATFP5 67 2e-12
At3g07600 unknown protein 65 7e-12
At3g20180 hypothetical protein 58 7e-10
At4g05030 52 5e-08
At1g55780 hypothetical protein 42 5e-05
At3g02960 hypothetical protein 41 1e-04
At5g23760 unknown protein 37 0.001
At5g52760 unknown protein (At5g52760) 36 0.003
At5g52750 unknown protein 33 0.031
At5g52730 putative protein 32 0.040
At1g29000 hypothetical protein 30 0.15
At5g52680 unknown protein 29 0.34
At4g16310 hypothetical protein 29 0.34
At3g26840 unknown protein 28 0.58
At1g79830 unknown protein (At1g79830) 28 0.58
At1g01490 unknown protein 28 0.58
At4g14510 hypothetical protein 28 0.76
At3g24515 unknown protein 28 0.76
At1g63950 hypothetical protein 27 1.3
At1g03370 unknown protein 27 1.3
>At5g48290 ATFP5
Length = 181
Score = 66.6 bits (161), Expect = 2e-12
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
M + K R KAM AV GV IKGD+++QIEVTG E+D + L +LRKK +A+LVS
Sbjct: 11 MTDDKTRAKAMTKAVQFKGVSAVEIKGDHRNQIEVTGVEVDMIPLIQILRKKVAFAELVS 70
Query: 61 IEAVGKTEEKKDKEK 75
+ V + +K+D++K
Sbjct: 71 VTKV-EPPKKEDEKK 84
>At3g07600 unknown protein
Length = 157
Score = 64.7 bits (156), Expect = 7e-12
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
M + R KAM AV GV IKGD+++QIEVTG E+D + L + LRKK +A+LVS
Sbjct: 11 MTDDTTRAKAMKTAVQFKGVNAVEIKGDHRNQIEVTGVEVDMIALINTLRKKVAFAELVS 70
Query: 61 IEAVGKTEEKKDKEK 75
V K E KD +K
Sbjct: 71 ---VAKVEPPKDGDK 82
>At3g20180 hypothetical protein
Length = 118
Score = 58.2 bits (139), Expect = 7e-10
Identities = 34/101 (33%), Positives = 54/101 (52%), Gaps = 1/101 (0%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
+N++K R KAM +AV GV ++G+ +D++ V G+ +DS L LRKK + L +
Sbjct: 7 VNSEKCRKKAMQVAVAADGVTSVAMEGEFQDELVVVGDGVDSASLIMALRKKACHVTLET 66
Query: 61 IEAVGKTE-EKKDKEKAEAIVAWPYVYSSVPHYPVYEIKNE 100
+E V K + E+K I P V + P VY I ++
Sbjct: 67 LEEVKKPQVEEKSITPHCCIAQCPVVSNEQPRPEVYRIVHD 107
>At4g05030
Length = 110
Score = 52.0 bits (123), Expect = 5e-08
Identities = 26/67 (38%), Positives = 40/67 (58%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
M K R++A+ I +GV I+G+ KD++ V GE +D+ L LRKK G+AD++S
Sbjct: 44 MRCDKCRSEALKIGAKTTGVTFVGIEGEEKDKVVVIGEGVDAACLVVRLRKKVGFADIIS 103
Query: 61 IEAVGKT 67
+ V T
Sbjct: 104 VTDVDDT 110
>At1g55780 hypothetical protein
Length = 133
Score = 42.0 bits (97), Expect = 5e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
M+++K KAM IA GV +I+G N DQ+ + GE ID +L L+KK +++
Sbjct: 3 MSDEKSMKKAMKIASAKPGVRSVSIQGQN-DQLVLLGEGIDLAELTRELKKKVCMTTIIT 61
Query: 61 IEA 63
++A
Sbjct: 62 VQA 64
>At3g02960 hypothetical protein
Length = 246
Score = 40.8 bits (94), Expect = 1e-04
Identities = 33/101 (32%), Positives = 51/101 (49%), Gaps = 10/101 (9%)
Query: 16 GVSGVEGT-TIKGDNKDQIEVTGEEIDSVKLASLLRKKFG-YADLVS-IEAVGKTEEKKD 72
G+ ++G +++ D V +D KL ++KK G +A+L+S I GK KK+
Sbjct: 146 GIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGKHAELLSQITEKGKDNNKKN 205
Query: 73 KEKAEA-----IVAWPYVYSSVPHYP--VYEIKNEPSCSIM 106
K E I ++P YSS YP ++ +N SCSIM
Sbjct: 206 NNKKEESDGNKIFSYPPQYSSQHAYPSQIFSDENVHSCSIM 246
>At5g23760 unknown protein
Length = 103
Score = 37.4 bits (85), Expect = 0.001
Identities = 28/77 (36%), Positives = 41/77 (52%), Gaps = 6/77 (7%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
M + K + KA+ A + GV+ +I D KDQ +D+V + L KK G DL+S
Sbjct: 12 MTDDKTKQKAIEAAADIFGVD--SIAADMKDQKLTVIGLMDAVAVVKKL-KKVGKVDLIS 68
Query: 61 IEAVGKTEEKKDKEKAE 77
VG +E+K +EK E
Sbjct: 69 ---VGPAKEEKKEEKKE 82
>At5g52760 unknown protein (At5g52760)
Length = 126
Score = 36.2 bits (82), Expect = 0.003
Identities = 33/119 (27%), Positives = 55/119 (45%), Gaps = 17/119 (14%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
++ ++ R KA+ SGV T+I D ++ + GE +D + LRK ++VS
Sbjct: 12 IHEERTRKKALVTVSRFSGV--TSITMDKSGKMTIVGE-VDVPAVVMKLRKLCN-TEIVS 67
Query: 61 IEAVGKTEEKKDKEKAEAIVAWP----YVYSSVP-------HYPV--YEIKNEPSCSIM 106
++ V +K + EK +A+P Y Y P H P + +EP+C IM
Sbjct: 68 VDDVKPPVKKPEPEKPAESIAYPVPMNYAYQFNPAYANSYYHQPYGNCRVVDEPNCVIM 126
>At5g52750 unknown protein
Length = 139
Score = 32.7 bits (73), Expect = 0.031
Identities = 31/108 (28%), Positives = 47/108 (42%), Gaps = 16/108 (14%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
++ +++R KA GV T+ D ++ V GE +D + LRK +LVS
Sbjct: 12 IHEERIRKKAFVTVSRCPGVTSITMD-DKTGKMTVVGE-VDVPVIVMKLRKLCN-TELVS 68
Query: 61 IEAVGKTEEKKDKE------------KAEAIVAWPYVYSSVPHY-PVY 95
+E V E+K + E K IVAWP ++ Y P Y
Sbjct: 69 VEVVKPPEKKPEPEKPAPPKPAPAPAKPAEIVAWPVQMNNPYQYNPAY 116
>At5g52730 putative protein
Length = 185
Score = 32.3 bits (72), Expect = 0.040
Identities = 18/70 (25%), Positives = 38/70 (53%), Gaps = 3/70 (4%)
Query: 3 NQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVSIE 62
+++ + KAM I G SGV + + K + VTG E D+ ++ L+K + +++ E
Sbjct: 51 DERKKKKAMKIVCGFSGVTSLNVMEEGK--LTVTG-EFDNYEMTKKLKKICKHVAIIAAE 107
Query: 63 AVGKTEEKKD 72
+ + E+ ++
Sbjct: 108 PIREPEQNRN 117
>At1g29000 hypothetical protein
Length = 287
Score = 30.4 bits (67), Expect = 0.15
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 25 IKGDNKDQIEVTGEEIDSVKLASLLRKK-FGYADLVSIEAVGKTEEKKDKEKAE 77
+K D K Q I+S KL + ++KK +A+++S KTEE+K KE+ +
Sbjct: 143 VKTDTKAQTLTVQGTIESAKLLAYIKKKVHKHAEIIS----SKTEEEKKKEEED 192
>At5g52680 unknown protein
Length = 238
Score = 29.3 bits (64), Expect = 0.34
Identities = 14/49 (28%), Positives = 29/49 (58%), Gaps = 2/49 (4%)
Query: 3 NQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRK 51
++K++ AM + SG+ +K DN Q+EV G E + + +++ L++
Sbjct: 104 DEKMKLDAMEVIWEFSGITSVEVKRDN--QLEVKGGEFNKIAMSTKLKE 150
>At4g16310 hypothetical protein
Length = 1265
Score = 29.3 bits (64), Expect = 0.34
Identities = 17/60 (28%), Positives = 30/60 (49%), Gaps = 1/60 (1%)
Query: 13 IAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLV-SIEAVGKTEEKK 71
I G+S V G N+D + G +++ +AS+ + G A ++ ++AV T E K
Sbjct: 467 INAGISSVNGKAASSTNQDYDLLQGRQLEESSMASVADSEEGVAFILGQVKAVESTSEGK 526
>At3g26840 unknown protein
Length = 701
Score = 28.5 bits (62), Expect = 0.58
Identities = 17/49 (34%), Positives = 25/49 (50%)
Query: 31 DQIEVTGEEIDSVKLASLLRKKFGYADLVSIEAVGKTEEKKDKEKAEAI 79
D+ E+ +E L + +F Y IE GK +E KDKEKA+ +
Sbjct: 605 DESELGNQECYFPGLVPKIPGRFYYYFGKPIETAGKEKELKDKEKAQEL 653
>At1g79830 unknown protein (At1g79830)
Length = 918
Score = 28.5 bits (62), Expect = 0.58
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 24 TIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVSIEAVGKTEEKKDKEKAE 77
+++ +N QIE EE SVKLA+ VS+EA +T +++ ++A+
Sbjct: 87 SVRTENPSQIEQKEEEAGSVKLAT--------EQAVSVEANKETNVRREADQAD 132
>At1g01490 unknown protein
Length = 177
Score = 28.5 bits (62), Expect = 0.58
Identities = 20/78 (25%), Positives = 40/78 (50%), Gaps = 3/78 (3%)
Query: 1 MNNQKLRNKAMAIAVGVSGVEGTTIKGDNKDQIEVTGEEIDSVKLASLLRKKFGYADLVS 60
+++ + + KA+ + G++ +I D K++ +D V + S LRK + D+V
Sbjct: 10 LHDDRAKQKALKTVSTLPGID--SIAMDMKEKKLTVIGTVDPVNVVSKLRKYWPMTDIVL 67
Query: 61 IEAVGKTE-EKKDKEKAE 77
+ + E EKK++ K E
Sbjct: 68 VGPAKEPEKEKKEEPKKE 85
>At4g14510 hypothetical protein
Length = 918
Score = 28.1 bits (61), Expect = 0.76
Identities = 17/48 (35%), Positives = 27/48 (55%), Gaps = 6/48 (12%)
Query: 28 DNKDQIEVTGEEIDSVKLASLLRK---KFGYAD---LVSIEAVGKTEE 69
DN D +E +E++ V+ A L+RK K +A+ L + A+ K EE
Sbjct: 615 DNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEE 662
>At3g24515 unknown protein
Length = 409
Score = 28.1 bits (61), Expect = 0.76
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 34 EVTGEEIDSVKLASLLRKKFGYADLVSIEAVGKTEEKKDKEKAEAIVAW 82
E +GE +SVKL + A V E G+ E++ K +A+V +
Sbjct: 183 EKSGESGNSVKLKLTVESSLSIAHTVKRETAGRDEQEDGNGKRKAVVGF 231
>At1g63950 hypothetical protein
Length = 113
Score = 27.3 bits (59), Expect = 1.3
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 28 DNKDQIEVTGEEIDSVKLASLLRKKFGYADL---VSIEAVGKTEEKKDKEKAEAIVAWPY 84
D K+ V ++D V+L LRKK+G A L V +A+ + + + K+K E I
Sbjct: 32 DLKEGTLVVMGDVDPVELVRNLRKKWGKAKLTLYVPYDALKEAKIAEAKQKREEIEREAL 91
Query: 85 VYSSVPHYPVYEIKNEPSCSI 105
+ ++ K E C I
Sbjct: 92 YRYNREIRDIFNDKEEQGCVI 112
>At1g03370 unknown protein
Length = 1859
Score = 27.3 bits (59), Expect = 1.3
Identities = 16/37 (43%), Positives = 23/37 (61%), Gaps = 5/37 (13%)
Query: 46 ASLLRKKFGYADLVSIEAVGKTEEKKDKEKAEAIVAW 82
ASL+RK + +EA+GK EE++ K KAE V +
Sbjct: 684 ASLIRK-----ETKELEALGKVEEERIKGKAETDVKY 715
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.310 0.129 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,279,100
Number of Sequences: 26719
Number of extensions: 84701
Number of successful extensions: 316
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 291
Number of HSP's gapped (non-prelim): 44
length of query: 106
length of database: 11,318,596
effective HSP length: 82
effective length of query: 24
effective length of database: 9,127,638
effective search space: 219063312
effective search space used: 219063312
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 52 (24.6 bits)
Medicago: description of AC144618.2