BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144591.1 - phase: 0
(167 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25590 unknown protein (At5g25590) 36 0.011
At5g54680 putative bHLH transcription factor (bHLH105) 35 0.014
At1g07120 hypothetical protein 35 0.025
At4g34150 unknown protein 33 0.093
At5g67470 formin-like protein 32 0.12
At4g32330 unknown protein 32 0.16
At1g53645 unknown protein 32 0.21
At3g62420 bZip transcription factor AtbZip53 31 0.27
At3g32880 hypothetical protein 31 0.27
At3g19320 unknown protein 31 0.27
At4g16790 glycoprotein homolog 31 0.36
At4g28300 predicted proline-rich protein 30 0.46
At1g62440 putative extensin-like protein (gnl|PID|e1310400 30 0.46
At4g33970 extensin-like protein 30 0.61
At4g14760 centromere protein homolog 30 0.61
At3g50130 putative protein 30 0.61
At1g17540 protein kinase, putative 30 0.61
At3g28350 hypothetical protein 30 0.79
At1g79730 unknown protein 30 0.79
At1g72790 unknown protein 30 0.79
>At5g25590 unknown protein (At5g25590)
Length = 775
Score = 35.8 bits (81), Expect = 0.011
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 63 PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSL-LKGNYVQT 106
PQPP P P P +F P P+K A LPS+ ++G VQT
Sbjct: 88 PQPPPPPPIENLPPPPPPLPKFSPSPIKRAISLPSMAVRGRKVQT 132
>At5g54680 putative bHLH transcription factor (bHLH105)
Length = 234
Score = 35.4 bits (80), Expect = 0.014
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 18 KMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPRQPSFTQQPRQ 77
K+ +L+ E +ELR E L+ + E+L ++ ++ + PQ P PP P+ +
Sbjct: 139 KIKELKTEKNELRDEKQRLKTEKEKLEQQLKAM----NAPQPSFFPAPPMMPTAFASAQG 194
Query: 78 QAPRTRFDPI 87
QAP + PI
Sbjct: 195 QAPGNKMVPI 204
>At1g07120 hypothetical protein
Length = 392
Score = 34.7 bits (78), Expect = 0.025
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 27/106 (25%)
Query: 20 DQLEQELHELRKEMTALRAKVEEL---TNRVSSLMVTKDLPQFQ---------QRPQPPR 67
D+LE+E HELR+E+ LRA+V L N S++ K + + P+ +
Sbjct: 26 DKLEKENHELRQEVARLRAQVSNLKSHENERKSMLWKKLQSSYDGSNTDGSNLKAPESVK 85
Query: 68 QPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRP 113
+ Q+ R P+ ++G T+PPPP P
Sbjct: 86 SNTKGQEVRNPNPK---------------PTIQGQSTATKPPPPPP 116
>At4g34150 unknown protein
Length = 247
Score = 32.7 bits (73), Expect = 0.093
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 9/68 (13%)
Query: 57 PQFQQRPQPPRQPSFTQQPRQQA----PRTR-FDPIPMKYAEFLPSLLKGNYVQTRPPPP 111
PQ QQ PQP P + P Q + P T + PIP Y PS + +P PP
Sbjct: 173 PQVQQYPQPSGYPPASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPS----SAYPPQPYPP 228
Query: 112 RPEKLPAG 119
+P P G
Sbjct: 229 QPSYYPQG 236
>At5g67470 formin-like protein
Length = 899
Score = 32.3 bits (72), Expect = 0.12
Identities = 21/69 (30%), Positives = 29/69 (41%), Gaps = 17/69 (24%)
Query: 50 LMVTKDLPQFQQRPQPPRQPSF--TQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTR 107
L +++ P+F Q P PP + +F Q + P R P P+ QT
Sbjct: 335 LPYSQNKPKFSQPPPPPNRAAFQAITQEKSPVPPPRRSPPPL---------------QTP 379
Query: 108 PPPPRPEKL 116
PPPP P L
Sbjct: 380 PPPPPPPPL 388
>At4g32330 unknown protein
Length = 436
Score = 32.0 bits (71), Expect = 0.16
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 21 QLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDL-------PQFQQRPQPPR 67
+LE++ H +E+ +++AK +E T M+ K L P F Q PQPP+
Sbjct: 223 KLEEKTHAKEEEINSMQAKSKE-TQEAELRMLRKSLNFKATPMPSFYQEPQPPK 275
>At1g53645 unknown protein
Length = 523
Score = 31.6 bits (70), Expect = 0.21
Identities = 24/67 (35%), Positives = 33/67 (48%), Gaps = 7/67 (10%)
Query: 57 PQFQQRPQPPRQPSFTQQ----PRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQ--TRPPP 110
P Q P P +Q S +QQ P+QQ PR++ P ++ P +K +Q T PP
Sbjct: 129 PPRQSPPPPQQQQSQSQQQRSQPQQQQPRSQPQQQPNDESQGSPVFVKLQEMQDATSSPP 188
Query: 111 PRPEKLP 117
P PE P
Sbjct: 189 P-PESKP 194
>At3g62420 bZip transcription factor AtbZip53
Length = 146
Score = 31.2 bits (69), Expect = 0.27
Identities = 21/71 (29%), Positives = 35/71 (48%), Gaps = 11/71 (15%)
Query: 16 THKMDQLEQELHELRKEMTALRAKVEELTNRVSSL-----MVTK------DLPQFQQRPQ 64
T ++D+ ++ E+ + LRA+ ELT+R+ SL MV + D+P+ + Q
Sbjct: 66 TEQVDEASKKYIEMESKNNVLRAQASELTDRLRSLNSVLEMVEEISGQALDIPEIPESMQ 125
Query: 65 PPRQPSFTQQP 75
P Q QP
Sbjct: 126 NPWQMPCPMQP 136
>At3g32880 hypothetical protein
Length = 503
Score = 31.2 bits (69), Expect = 0.27
Identities = 24/111 (21%), Positives = 49/111 (43%), Gaps = 10/111 (9%)
Query: 2 SSFNLSAHMQTLAQTHKMDQLEQELHELRK---EMTALRAK----VEELTNRVSSLMVTK 54
S ++ S H+ ++ + + + +L+K + L AK ++ L +++S T
Sbjct: 388 SMYHFSEHIPPARESKSLSEAHRNNSKLQKWCKKQDKLLAKCLRAIKFLKDKISCSSSTT 447
Query: 55 DLPQFQQRPQPPRQPSFTQQPRQQAPRTR---FDPIPMKYAEFLPSLLKGN 102
+PQ Q P + +P Q+ P R +P +++ F P L+ N
Sbjct: 448 AIPQGQLPQDMPSRRYDAPEPSQRRPEPREQEIPHVPARHSSFEPDLIASN 498
>At3g19320 unknown protein
Length = 493
Score = 31.2 bits (69), Expect = 0.27
Identities = 17/51 (33%), Positives = 21/51 (40%), Gaps = 5/51 (9%)
Query: 63 PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRP 113
P PP+ P P+ P P P E P +Y+ PPPPRP
Sbjct: 63 PPPPQTPPPPPPPQSLPP-----PSPSPEPEHYPPPPYHHYITPSPPPPRP 108
>At4g16790 glycoprotein homolog
Length = 473
Score = 30.8 bits (68), Expect = 0.36
Identities = 25/81 (30%), Positives = 35/81 (42%), Gaps = 16/81 (19%)
Query: 44 TNRVSSLMVTKDLPQFQQRP--QPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKG 101
+ V SL K+L + +P + PS PR+ +PIP +EF PS
Sbjct: 232 SKEVESLPSVKNLTTVESQPLIKNLTPPSSFSSPRKS------NPIPNLASEFHPS---- 281
Query: 102 NYVQTRPPPPRPEKLPAGFRA 122
PPPP P LPA + +
Sbjct: 282 ----PPPPPPPPPPLPAFYNS 298
>At4g28300 predicted proline-rich protein
Length = 496
Score = 30.4 bits (67), Expect = 0.46
Identities = 29/109 (26%), Positives = 47/109 (42%), Gaps = 13/109 (11%)
Query: 7 SAHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPP 66
S+H Q H D++ + E +K A ++L + + + PQ Q +PQP
Sbjct: 182 SSHSQ-----HGEDRVATPVPEPKKSENTSDAHNQQLALALPHQIAPQ--PQVQPQPQPQ 234
Query: 67 RQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTR--PPPPRP 113
+ + P Q T P+P+ PS L+ Q++ PPPP P
Sbjct: 235 QHQYYMPPPPTQLQNTP-APVPVSTP---PSQLQAPPAQSQFMPPPPAP 279
>At1g62440 putative extensin-like protein (gnl|PID|e1310400
Length = 786
Score = 30.4 bits (67), Expect = 0.46
Identities = 20/69 (28%), Positives = 28/69 (39%), Gaps = 5/69 (7%)
Query: 53 TKDLPQFQQRPQPPRQPSFTQQP----RQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRP 108
+K P + P PP P + P + +P R P P + PS Y+ + P
Sbjct: 451 SKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPPPPPLSPPPPSP-PPPYIYSSP 509
Query: 109 PPPRPEKLP 117
PPP P P
Sbjct: 510 PPPSPSPPP 518
Score = 27.7 bits (60), Expect = 3.0
Identities = 19/57 (33%), Positives = 24/57 (41%), Gaps = 6/57 (10%)
Query: 57 PQFQQRPQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRP 113
P Q P PP+ T PR+ P P P Y ++ S Y T+ PPP P
Sbjct: 532 PPTTQSPPPPKYEQ-TPSPREYYP----SPSP-PYYQYTSSPPPPTYYATQSPPPPP 582
Score = 26.9 bits (58), Expect = 5.1
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 13/73 (17%)
Query: 53 TKDLPQFQQRPQPPRQ---PSFTQQP----RQQAPRTRFDPIPMKYAEFLPSLLKGNYVQ 105
+K P F+ P PP PSF P + +P R P P S + +
Sbjct: 406 SKMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFRATPPPPS------SKMSPSVKA 459
Query: 106 TRPPPPRPEKLPA 118
PPPP PE P+
Sbjct: 460 YPPPPPPPEYEPS 472
>At4g33970 extensin-like protein
Length = 699
Score = 30.0 bits (66), Expect = 0.61
Identities = 20/58 (34%), Positives = 25/58 (42%), Gaps = 7/58 (12%)
Query: 61 QRPQPPRQPSFTQQPRQQAPRT-RFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLP 117
Q+PQPP++ P Q+P T R P P P V + PPPP P P
Sbjct: 492 QKPQPPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPP------VYSPPPPPPPVHSP 543
>At4g14760 centromere protein homolog
Length = 1676
Score = 30.0 bits (66), Expect = 0.61
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 1 MSSFNLSAHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSL 50
+ SFN + ++ HKM +QEL + + E+ L+A ++E R S L
Sbjct: 361 LESFNQTMKVEAENLAHKMSAKDQELSQKQNEIEKLQAVMQEEQLRFSEL 410
>At3g50130 putative protein
Length = 564
Score = 30.0 bits (66), Expect = 0.61
Identities = 22/63 (34%), Positives = 26/63 (40%), Gaps = 17/63 (26%)
Query: 57 PQFQQRPQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKL 116
P F+ P+PP PSF P PR F K ++ LP PPPP P
Sbjct: 17 PSFRSIPRPPPPPSFRSIP----PRRHFF---KKKSKSLPP----------PPPPLPPAR 59
Query: 117 PAG 119
P G
Sbjct: 60 PFG 62
>At1g17540 protein kinase, putative
Length = 740
Score = 30.0 bits (66), Expect = 0.61
Identities = 26/101 (25%), Positives = 41/101 (39%), Gaps = 2/101 (1%)
Query: 38 AKVEELTNRVSSLMVTKDLPQFQQRPQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPS 97
+K + LT+R +S T P Q PQ P+ P P + P DP P + S
Sbjct: 147 SKGKLLTSRSASRPQTPQGPHTPQGPQTPQAPQHPPHPSKH-PSMMSDPGPTS-STSSES 204
Query: 98 LLKGNYVQTRPPPPRPEKLPAGFRADLSCVFHQGAPGHDVE 138
+ PP P P+ +R+ +S + ++ H E
Sbjct: 205 GRSSPALNGELSPPTPHYKPSLYRSSMSELSNEFPSDHSAE 245
>At3g28350 hypothetical protein
Length = 290
Score = 29.6 bits (65), Expect = 0.79
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 13 LAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPRQ 68
LA+ +QL++E E K+M+ +E +T + +S+ V DLP FQ+ R+
Sbjct: 165 LAEQKMQEQLQKEFDEYEKKMSL----IEAITEKTNSVQV--DLPFFQKNSSLDRK 214
>At1g79730 unknown protein
Length = 589
Score = 29.6 bits (65), Expect = 0.79
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 63 PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLP 117
P PP PS QP P P P Y + P + N +Q PPPP P P
Sbjct: 32 PVPPPPPS--HQPYSYPPPP--PPPPHAYYQQGPHYPQFNQLQAPPPPPPPSAPP 82
>At1g72790 unknown protein
Length = 561
Score = 29.6 bits (65), Expect = 0.79
Identities = 19/66 (28%), Positives = 26/66 (38%), Gaps = 10/66 (15%)
Query: 63 PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTR----------PPPPR 112
P PP P + R + R P+ + ++ P YV T PPPP
Sbjct: 397 PPPPPPPERRYESRASTSKLRKAPVESRTSKPNPPAKVTQYVGTGSESPLMPIPPPPPPP 456
Query: 113 PEKLPA 118
P K+PA
Sbjct: 457 PFKMPA 462
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,030,083
Number of Sequences: 26719
Number of extensions: 191917
Number of successful extensions: 1323
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 1194
Number of HSP's gapped (non-prelim): 203
length of query: 167
length of database: 11,318,596
effective HSP length: 92
effective length of query: 75
effective length of database: 8,860,448
effective search space: 664533600
effective search space used: 664533600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC144591.1