BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144564.12 + phase: 0 
         (357 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g09580 putative protein                                            366  e-102
At1g53345 unknown protein                                             151  6e-37
At1g52760 lipase like protein                                          29  4.5
At5g04040 unknown protein                                              28  7.7
At3g03710 putative polynucleotide phosphorylase                        28  7.7
At2g24700 hypothetical protein                                         28  7.7
At1g28050 unknown protein                                              28  7.7

>At5g09580 putative protein
          Length = 393

 Score =  366 bits (940), Expect = e-102
 Identities = 200/346 (57%), Positives = 249/346 (71%), Gaps = 17/346 (4%)

Query: 18  RSLRSDAALEAIAKASEDKVPNIVLYNYPSFSGAFSSLFAHLFHTRHNLPSLSLPFSSVP 77
           RS RSDAALEAIA A E+KVPN+VLYNYPSFSGAFS+LFAHL+H R  LP L LPFSS+ 
Sbjct: 53  RSFRSDAALEAIANALEEKVPNLVLYNYPSFSGAFSALFAHLYHYRLRLPCLILPFSSL- 111

Query: 78  SLAFSCYNIGLKICALKAFRHAICLTFFL-------QTNSLIIGFDHRKSVLSQIPSTNE 130
            + F   ++      L+ F     L F +       +T   I+ FDHR S L +I    E
Sbjct: 112 -IPFRVEDL-----CLEGFERCYLLDFVVPKDFACQKTACEIVCFDHRNSALKRIGLIKE 165

Query: 131 -CPENIMINLNHEKSSSRAVYEYFTDKHEDIKTSNGVVPSLVDSKDKGRVELILKYIEDA 189
              + + I ++ E SSS+AVY+YF+ K  D ++S     SL+  +DK RVE +L YIED 
Sbjct: 166 EHKKRLKIYVDTETSSSKAVYKYFSSKLTDQRSSEVEALSLLSVEDKTRVESVLDYIEDI 225

Query: 190 DLRHWSLPDIKPFNIGLSEWRSRFSCISNPYMFKQLLELSVEELIAKGNSSLLARRNAAS 249
           DLR W LPDIK F+ GL +WRSR +CI NPYM++QLL++S  +LIA GNS   +R   A 
Sbjct: 226 DLRRWMLPDIKAFSFGLKDWRSRINCIINPYMYEQLLKISSADLIAYGNSYFSSRLIDAK 285

Query: 250 KLL--DKVFRVRLGRGFYGECLGVRADGNSNLSDEIGMLLSVKSASIGLRPIGAVIFMQR 307
           KLL  +K F++RLGRG YGECLG+RADGN  LSDE+G LLS++S++ GLRPIGAV F+QR
Sbjct: 286 KLLKLNKAFKIRLGRGLYGECLGMRADGNHQLSDELGKLLSLQSSAAGLRPIGAVTFVQR 345

Query: 308 NNLKMCLRSSDNATDTSEVAKAYGGGGSASSSSFIIRMDEYNQWLS 353
           NNLKMCLRS+D  T+TSEVAKAYGGGG++SSSSFIIRMDEYNQW+S
Sbjct: 346 NNLKMCLRSTDAITNTSEVAKAYGGGGTSSSSSFIIRMDEYNQWIS 391


>At1g53345 unknown protein
          Length = 325

 Score =  151 bits (381), Expect = 6e-37
 Identities = 99/320 (30%), Positives = 165/320 (50%), Gaps = 16/320 (5%)

Query: 41  VLYNYPSFSGAFSSLFAHLFHTRHNLPSLSLPFSSVPSLAFSCYNIGLKICALKAFRHAI 100
           VLY+YP   G F++L AHL+ +  ++PSL  P +    +  +   +   I  L  F    
Sbjct: 10  VLYHYPCHDGVFAALAAHLYFSAKSIPSLFFPNTVYSPITINQLPLQ-DISHLYLFDFTG 68

Query: 101 CLTFFLQTNSLI---IGFDHRKSVLSQIPSTNECPENIMINLNHEKSSSRAVYEYFTDKH 157
              F  Q +  +   +  DH K+ +  +   +   +N+   L+ E+S +   ++YFT K 
Sbjct: 69  PPGFVHQVSPKVDNVVILDHHKTAIDSLGDVSLTCKNVTSVLDIERSGATIAFDYFTQKL 128

Query: 158 EDIKTSNGVVPSLVDSKDKGRVELILKYIEDADLRHWSLPDIKPFNIGLSEWRSRFSCIS 217
             ++ S G    + D K   R+  + +YIEDAD+  W LP+ K FN G+ + +  +    
Sbjct: 129 --VEESRGSCKEMNDFK---RMRRVFEYIEDADIWKWELPESKAFNSGILDLKIEYDFNK 183

Query: 218 NPYMFKQLLELSVEELIAKGNSSLLARRNAASKLLDKVFRVRLGRG-FYGECLGVRADGN 276
           N  +F QLL L  E +I +G  SL  +     ++L++ + + LG    +G CL V AD  
Sbjct: 184 NQSLFDQLLSLDHESVINRGKQSLSKKHKLIHEVLEQSYEIVLGGDEEFGRCLAVNADEI 243

Query: 277 SNLSDEIGMLLSVKSASIGLRPIGAVIFM-----QRNNLKMCLRSSDNATDTSEVAKAYG 331
           + L  E+G  L+ KS ++ LR +GAV++        N LK+ LRS     DT+ V++ +G
Sbjct: 244 TELRSELGNQLAEKSKNLSLRGVGAVVYRVPELGDENKLKISLRSVAE-EDTTPVSQRFG 302

Query: 332 GGGSASSSSFIIRMDEYNQW 351
           GGG  ++SSF++   E+ QW
Sbjct: 303 GGGHKNASSFLLNSMEFEQW 322


>At1g52760 lipase like protein
          Length = 332

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 15/59 (25%), Positives = 29/59 (48%), Gaps = 5/59 (8%)

Query: 144 SSSRAVYEYFTDKHEDIKTSNGVVPSLVDSKDKGRVELILKYIEDADLRHWSLPDIKPF 202
           +SS+ +YE  +   + +K   G+  SL+  +     E++LK     D+R W    +K +
Sbjct: 274 TSSKLLYEKASSADKTLKIYEGMYHSLIQGEPDENAEIVLK-----DMREWIDEKVKKY 327


>At5g04040 unknown protein
          Length = 825

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 130 ECPENIMINLNHEKSSSRAVYEYFTDKHEDIKTSNGVVPSLVDSKDKGRVELILKYIEDA 189
           E PE++ +++  ++    +V E+  D +++ +  NG     V S+D G  E +   + DA
Sbjct: 766 ELPESVQLDIPEKEMDCSSVSEHEEDDNDNEEEHNGSSLVTVSSEDSGLQEPVSGSVIDA 825


>At3g03710 putative polynucleotide phosphorylase
          Length = 948

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 219 PYMFKQLLELSVEELI-AKGNSSLLARRNAASKLLDKVFRVRLGRGF 264
           P ++K + EL+ EEL  A    S ++RR A S L +KV  +   +G+
Sbjct: 349 PELYKHVKELAGEELTKALQIKSKISRRKAISSLEEKVLTILTEKGY 395


>At2g24700 hypothetical protein
          Length = 899

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 17/98 (17%)

Query: 249 SKLLDKVFRVRLGRGFYGECLGVRADGNSNLSDEIGMLLSVKSASIGLRPIGAVIFMQRN 308
           S L+DK+  + LGRG  G C  ++     N S    ML +V +  I  +P      M  N
Sbjct: 531 SLLMDKIGTMSLGRGSKGFCENIKI----NSSPLTTMLFNVSACDIRDKP------MPSN 580

Query: 309 NLKMCLRSSDNATDTSEVAK----AYGGGGSASSSSFI 342
           N    +   D      +V K    +  G  S+ +SSF+
Sbjct: 581 N---DINKIDQLERVKKVRKNSSQSEAGSSSSGNSSFV 615


>At1g28050 unknown protein
          Length = 433

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 17/42 (40%), Positives = 21/42 (49%)

Query: 314 LRSSDNATDTSEVAKAYGGGGSASSSSFIIRMDEYNQWLSAN 355
           L  S    DTS V  AY G G+ASS +    +D  N+  S N
Sbjct: 268 LGQSRGPEDTSRVEAAYVGKGAASSFTINNFVDHMNETCSTN 309


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,044,035
Number of Sequences: 26719
Number of extensions: 341881
Number of successful extensions: 877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 864
Number of HSP's gapped (non-prelim): 9
length of query: 357
length of database: 11,318,596
effective HSP length: 100
effective length of query: 257
effective length of database: 8,646,696
effective search space: 2222200872
effective search space used: 2222200872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)