BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144539.12 + phase: 0 
         (417 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g47410 putative WD-40 repeat protein                               523  e-149
At5g49430 WD-40 repeat protein-like                                   486  e-138
At3g49660 putative WD-40 repeat - protein                              79  4e-15
At3g16650 PP1/PP2A phosphatases pleiotropic regulator PRL2             79  4e-15
At2g41500 putative U4/U6 small nuclear ribonucleoprotein               79  6e-15
At4g15900 PRL1 protein                                                 78  1e-14
At4g02730 putative WD-repeat protein                                   77  2e-14
At5g64730 unknown protein                                              73  3e-13
At5g16750 WD40-repeat protein                                          72  7e-13
At3g44530 WD repeat domain protein                                     72  7e-13
At1g71840 unknown protein (At1g71840)                                  71  1e-12
At5g52820 Notchless protein homolog                                    71  1e-12
At2g43770 putative splicing factor                                     71  1e-12
At2g21390 coatomer alpha subunit                                       69  4e-12
At1g18080   putative guanine nucleotide-binding protein beta sub...    68  1e-11
At3g18130 protein kinase C-receptor/G-protein, putative                66  4e-11
At5g25150 transcription initiation factor IID-associated factor-...    65  5e-11
At1g73720 unknown protein                                              65  5e-11
At1g48630 unknown protein                                              65  9e-11
At1g15440 unknown protein                                              64  1e-10

>At2g47410 putative WD-40 repeat protein
          Length = 1389

 Score =  523 bits (1348), Expect = e-149
 Identities = 273/420 (65%), Positives = 314/420 (74%), Gaps = 27/420 (6%)

Query: 16  SLKHLSSSKAPEKTQPDVANQNHDM-----DVDVDIGEVYFLIMRFLSAGPCHKTCSHLW 70
           S   +  S   +  Q +V  Q HD      D+D+D+ EVYFLI+ FLS GPC +T  HL 
Sbjct: 7   STPFMEPSNLAKLVQGNVPLQPHDSHSSLTDLDMDLREVYFLILHFLSIGPCERTFGHLR 66

Query: 71  NELLENQLLPRRYHAWYSRSGASSGVPHDDGQSFPLEDYNKLAERYPHIEKDHLVKLLKQ 130
           +E+LE  LLPRRYH+W+SRSG  SG   DDG S PL  Y+ L ERYPHIEKDHLVKLLKQ
Sbjct: 67  DEILEKGLLPRRYHSWWSRSGIYSGRADDDGISLPLS-YDNLIERYPHIEKDHLVKLLKQ 125

Query: 131 LLLNKASLSPGMSTGNPPNAADVPTLLGRGSFSLLSYDGDKVNEEVKPPPPYMRWPHTKA 190
           L+LN +  S     GN PNAADVPTLLG G+FSL+    +  +++ +    Y+RWPH  A
Sbjct: 126 LILNPSFPSHMRVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHMHA 185

Query: 191 NQVHGLHLREIGGGLPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHCNAVYCAIFD 250
           +QV GL LREIGGG  +HHRAPSI +AC+AIAKPSTMVQKMQNIK++RGH NAVYCAIFD
Sbjct: 186 DQVRGLSLREIGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFD 245

Query: 251 RSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVW 310
           RSGRYVITGSDDRLVKIWSMETA  LASCRGH GDITDLAVSSNNALVAS+SND++IRVW
Sbjct: 246 RSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVW 305

Query: 311 RLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPK 370
           RLPDG+PISVLRGHTGAVTAIAFSPR        +SSDDGTCRIWDARY+   PR+YVP 
Sbjct: 306 RLPDGMPISVLRGHTGAVTAIAFSPRQ-------ASSDDGTCRIWDARYSQWLPRIYVPS 358

Query: 371 PSDST---------GRSSGPSSNT-----MPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
           PSD+          G S+  SSNT       QSHQI CCA+NANGT+FVTGSSD+ ARVY
Sbjct: 359 PSDANTGSLEVSLLGESTFTSSNTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVY 418


>At5g49430 WD-40 repeat protein-like
          Length = 1576

 Score =  486 bits (1252), Expect = e-138
 Identities = 250/382 (65%), Positives = 295/382 (76%), Gaps = 15/382 (3%)

Query: 1   MALQKYVPSGDAPTVSLKHLS-SSKAPEKTQ---PDVANQNHDMDVDVDIGEVYFLIMRF 56
           MAL+K  P GD+ ++ +K L+ S K P   Q   PD+  Q+   ++D+D+ EVYFL++  
Sbjct: 1   MALRKNTPKGDSVSLPMKPLNFSRKLPGNVQIPDPDIV-QSVAPNIDLDLREVYFLMLHL 59

Query: 57  LSAGPCHKTCSHLWNELLENQLLPRRYHAWYSRSGASSGVPHDDGQSFPLEDYNKLAERY 116
           LS+GPC KT + L +ELLE++LLPRRYHAWYSRSG  SG  +DDG SFPL +Y +LA+RY
Sbjct: 60  LSSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPL-NYTELAKRY 118

Query: 117 PHIEKDHLVKLLKQLLL--NKASLSPGMSTGNPPNAADVPTLLGRGSFSLLSYDGDKVNE 174
            H++KDHLV+LLKQL+   N+ + S G+  GN    A VPTLLG GSFSLLS D + V  
Sbjct: 119 SHVKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGS 178

Query: 175 EVKPPPPYMRWPHTKANQVHGLHLREIGGGLPRHHRAPSIRAACYAIAKPSTMVQKMQNI 234
           ++KPPP  MRWPH  A+QV G+ LREIGGG  RHHRAPSIRAACY IAKPS+MVQKMQNI
Sbjct: 179 DLKPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNI 238

Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
           KR+RGH NAVYCAI DRSGRYVITGSDDRLVK+WSM+TAY LASCRGH GDITDLAVSSN
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298

Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRI 354
           N  +AS+SND +IRVWRLPDGLP+SVLRGHTGAVTAIAFSPRP        SSDDGTCRI
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRP-------GSSDDGTCRI 351

Query: 355 WDARYTHSTPRLYVPKPSDSTG 376
           WDAR     PR+YVP+P    G
Sbjct: 352 WDARGAQFAPRIYVPRPPSPDG 373


>At3g49660 putative WD-40 repeat - protein
          Length = 317

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 47/183 (25%), Positives = 85/183 (45%), Gaps = 21/183 (11%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           ++   GH N +    F    R++++ SDD+ +K+W +ET   + +  GH      +  + 
Sbjct: 64  VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123

Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCR 353
            + ++ S S D  +R+W +  G  + VL  H+  VTA+ F+ R  ++  ++SSS DG CR
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSL--IVSSSYDGLCR 180

Query: 354 IWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLA 413
           IWD+   H    L                     ++  +    F+ NG   + G+ DN  
Sbjct: 181 IWDSGTGHCVKTL------------------IDDENPPVSFVRFSPNGKFILVGTLDNTL 222

Query: 414 RVY 416
           R++
Sbjct: 223 RLW 225



 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 249 FDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGD---ITDLAVSSNNALVASSSNDY 305
           F  +G++++ G+ D  +++W++ +A  L +  GHV     I+     +N   + S S D 
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265

Query: 306 IIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
            + +W L     +  L GHT  V  +A  P  N +    S S D T RIW
Sbjct: 266 CVHMWELNSKKLLQKLEGHTETVMNVACHPTENLI---ASGSLDKTVRIW 312



 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 234 IKRIRGHCNAVYC---AIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLA 290
           +K   GH NA YC   A    +G+ +++GS+D  V +W + +   L    GH   + ++A
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292

Query: 291 VSSNNALVASSSNDYIIRVW 310
                 L+AS S D  +R+W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312



 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 36/166 (21%), Positives = 62/166 (36%), Gaps = 43/166 (25%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           IK + GH N  +C  F+     +++GS D  V+IW + T   L     H   +T +  + 
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165

Query: 294 NNALVASSSNDYIIRVWRLPDGL-----------PISVLR-------------------- 322
           + +L+ SSS D + R+W    G            P+S +R                    
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225

Query: 323 ------------GHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
                       GH  A   I+ +       +++S S+D    +W+
Sbjct: 226 NISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 33/140 (23%), Positives = 58/140 (40%), Gaps = 27/140 (19%)

Query: 282 HVGDITDLAVSSNNALVASSSNDYIIRVWRL-----PDGLPISVLRGHTGAVTAIAFSPR 336
           H   ++ +  SS+  L+AS+S D  IR + +     P   P+    GH   ++ +AFS  
Sbjct: 23  HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82

Query: 337 PNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCA 396
              +   +S+SDD T ++WD                     +       +  ++  FC  
Sbjct: 83  ARFI---VSASDDKTLKLWDV-------------------ETGSLIKTLIGHTNYAFCVN 120

Query: 397 FNANGTVFVTGSSDNLARVY 416
           FN    + V+GS D   R++
Sbjct: 121 FNPQSNMIVSGSFDETVRIW 140


>At3g16650 PP1/PP2A phosphatases pleiotropic regulator PRL2
          Length = 479

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
           +N + ++GH   V    FD S  +  TGS DR +KIW + T     +  GH+G +  LAV
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220

Query: 292 SSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
           S+ +  + S+ +D  ++ W L     I    GH   V  +A  P  + V   L+   D  
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV---LTGGRDSV 277

Query: 352 CRIWDAR 358
           CR+WD R
Sbjct: 278 CRVWDIR 284



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 34/126 (26%), Positives = 55/126 (42%), Gaps = 4/126 (3%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           + GH   V          Y+ +  DD+ VK W +E    + S  GH+  +  LA+     
Sbjct: 208 LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLD 267

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           +V +   D + RVW +   + I VL   +   + +A    P    Q+++ S D T + WD
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDP----QVITGSHDSTIKFWD 323

Query: 357 ARYTHS 362
            RY  S
Sbjct: 324 LRYGKS 329



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           I+   GH + VYC     +   V+TG  D + ++W + T   +     H  D+  +    
Sbjct: 247 IRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQI-FVLPHDSDVFSVLARP 305

Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPN 338
            +  V + S+D  I+ W L  G  ++ +  H   V A+A  P+ N
Sbjct: 306 TDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKEN 350



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 39/180 (21%), Positives = 72/180 (39%), Gaps = 21/180 (11%)

Query: 240 HCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV--SSNNAL 297
           H + V+  +   +   VITGS D  +K W +    S+A+   H   +  +A+    N+ +
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353

Query: 298 VASSSNDYIIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
            AS+ N   I+ + LP G    ++L      + A+A     N    +++  D G    WD
Sbjct: 354 SASADN---IKKFSLPKGEFCHNMLSLQRDIINAVAV----NEDGVMVTGGDKGGLWFWD 406

Query: 357 ARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
            +  H+  R        S    +G           I+   ++  G+  VT   D   +++
Sbjct: 407 WKSGHNFQRAETIVQPGSLESEAG-----------IYAACYDQTGSRLVTCEGDKTIKMW 455


>At2g41500 putative U4/U6 small nuclear ribonucleoprotein
          Length = 554

 Score = 78.6 bits (192), Expect = 6e-15
 Identities = 44/129 (34%), Positives = 62/129 (47%), Gaps = 3/129 (2%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           ++   GH + +    F  SG+Y+ T S D+  ++W + T   L    GH   +  +A   
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391

Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCR 353
           + AL AS   D + RVW L  G  I V +GH   V ++ FSP     Y L S  +D  CR
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG---YHLASGGEDNQCR 448

Query: 354 IWDARYTHS 362
           IWD R   S
Sbjct: 449 IWDLRMRKS 457



 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 31/120 (25%), Positives = 53/120 (43%), Gaps = 2/120 (1%)

Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALV 298
           GH  +VY   F + G    +   D L ++W + T  S+   +GH+  +  +  S N   +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438

Query: 299 ASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
           AS   D   R+W L     + ++  H   V+ + + P+    Y L ++S D    IW  R
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEG--YFLATASYDMKVNIWSGR 496



 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 29/211 (13%)

Query: 210 RAPSIRAACY--AIAKPSTMVQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKI 267
           R   I A C    + K   M Q    I  ++ H       +F      + T S DR  K+
Sbjct: 265 RDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKL 324

Query: 268 WSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGA 327
           W  +    L +  GH+  +  +A   +   + ++S D   R+W +  G  + +  GH+ +
Sbjct: 325 WKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRS 383

Query: 328 VTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMP 387
           V  IAF  +  A+    S   D   R+WD R                TGRS       + 
Sbjct: 384 VYGIAFQ-QDGAL--AASCGLDSLARVWDLR----------------TGRSI-----LVF 419

Query: 388 QSH--QIFCCAFNANGTVFVTGSSDNLARVY 416
           Q H   +F   F+ NG    +G  DN  R++
Sbjct: 420 QGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450



 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 42/169 (24%), Positives = 72/169 (41%), Gaps = 24/169 (14%)

Query: 249 FDRSGRYVITGSDDRLVKIWSM-ETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYII 307
           F R G+ + T S   + K+W M +   ++A  + H    TD+  S  +  +A++S D   
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTA 322

Query: 308 RVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLY 367
           ++W+  DG  +    GH   +  +AF P       L ++S D T R+WD           
Sbjct: 323 KLWK-TDGTLLQTFEGHLDRLARVAFHPSGK---YLGTTSYDKTWRLWDI---------- 368

Query: 368 VPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
                 +TG            S  ++  AF  +G +  +   D+LARV+
Sbjct: 369 ------NTGAELLLQEG---HSRSVYGIAFQQDGALAASCGLDSLARVW 408



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 26/125 (20%), Positives = 54/125 (42%), Gaps = 4/125 (3%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
           ++I   +GH   V+   F  +G ++ +G +D   +IW +    SL     H   ++ +  
Sbjct: 414 RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY 473

Query: 292 SSNNA-LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
                  +A++S D  + +W   D   +  L GH   V ++  +   + +    + S D 
Sbjct: 474 EPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCI---ATVSHDR 530

Query: 351 TCRIW 355
           T ++W
Sbjct: 531 TIKLW 535


>At4g15900 PRL1 protein
          Length = 486

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 41/127 (32%), Positives = 61/127 (47%), Gaps = 3/127 (2%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
           +N + I+GH   V    FD S  +  TGS DR +KIW + T     +  GH+  +  LAV
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226

Query: 292 SSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
           S+ +  + S+ +D  ++ W L     I    GH   V  +A  P  +    LL+   D  
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDV---LLTGGRDSV 283

Query: 352 CRIWDAR 358
           CR+WD R
Sbjct: 284 CRVWDIR 290



 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           + GH   V          Y+ +  DD+ VK W +E    + S  GH+  +  LA+     
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           ++ +   D + RVW +   + I  L GH   V ++   P      Q+++ S D T + WD
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDP---QVVTGSHDTTIKFWD 330

Query: 357 ARY 359
            RY
Sbjct: 331 LRY 333



 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           I+   GH + VYC     +   ++TG  D + ++W + T   + +  GH   +  +    
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312

Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
            +  V + S+D  I+ W L  G  +S L  H  +V A+   P+ NA     S+S D T
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA---FASASADNT 367



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 35/137 (25%), Positives = 58/137 (41%), Gaps = 22/137 (16%)

Query: 280 RGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNA 339
           +GH+G +  +A   +N    + S D  I++W +  G+    L GH   V  +A S R   
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232

Query: 340 VYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNA 399
           ++   S+ DD   + WD    +   R Y        G  SG           ++C A + 
Sbjct: 233 MF---SAGDDKQVKCWDLEQ-NKVIRSY-------HGHLSG-----------VYCLALHP 270

Query: 400 NGTVFVTGSSDNLARVY 416
              V +TG  D++ RV+
Sbjct: 271 TLDVLLTGGRDSVCRVW 287



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 230 KMQNIKRIRGHCNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITD 288
           KMQ I  + GH N V C++F R +   V+TGS D  +K W +    ++++   H   +  
Sbjct: 292 KMQ-IFALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349

Query: 289 LAVSSNNALVASSSNDYIIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
           + +       AS+S D   + + LP G    ++L      + A+A     N    +++  
Sbjct: 350 MTLHPKENAFASASADN-TKKFSLPKGEFCHNMLSQQKTIINAMAV----NEDGVMVTGG 404

Query: 348 DDGTCRIWDARYTHS 362
           D+G+   WD +  HS
Sbjct: 405 DNGSIWFWDWKSGHS 419


>At4g02730 putative WD-repeat protein
          Length = 333

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 54/187 (28%), Positives = 90/187 (47%), Gaps = 25/187 (13%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
           +++K + GH  A+ C  F   G  + + S D+ + +WS      +    GH   I+DLA 
Sbjct: 34  RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93

Query: 292 SSNNALVASSSNDYIIRVW--RLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDD 349
           SS++    S+S+D  +R+W  R P    + VLRGHT  V  + F+P  N +   +S S D
Sbjct: 94  SSDSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNPPSNLI---VSGSFD 149

Query: 350 GTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSS 409
            T RIW+ + T    R+                +++MP    I    FN +G++ V+ S 
Sbjct: 150 ETIRIWEVK-TGKCVRMI--------------KAHSMP----ISSVHFNRDGSLIVSASH 190

Query: 410 DNLARVY 416
           D   +++
Sbjct: 191 DGSCKIW 197



 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 46/182 (25%), Positives = 91/182 (49%), Gaps = 26/182 (14%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           +K +RGH N V+C  F+     +++GS D  ++IW ++T   +   + H   I+ +  + 
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180

Query: 294 NNALVASSSNDYIIRVWRLPDGLPI-SVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
           + +L+ S+S+D   ++W   +G  + +++   + AV+   FS  PN  + L+++ D    
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFS--PNGKFILVATLD---- 234

Query: 353 RIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFC--CAFN-ANGTVFVTGSS 409
                    ST +L     + +TG+     +     ++++FC   AF+  NG   V+GS 
Sbjct: 235 ---------STLKL----SNYATGKFLKVYTG---HTNKVFCITSAFSVTNGKYIVSGSE 278

Query: 410 DN 411
           DN
Sbjct: 279 DN 280



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/83 (28%), Positives = 42/83 (49%), Gaps = 5/83 (6%)

Query: 234 IKRIRGHCNAVYC---AIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLA 290
           +K   GH N V+C   A    +G+Y+++GS+D  V +W ++    L    GH   +  ++
Sbjct: 248 LKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVS 307

Query: 291 VSSNNALVASSSN--DYIIRVWR 311
                  ++SS N  D  IR+W+
Sbjct: 308 CHPVQNEISSSGNHLDKTIRIWK 330



 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 243 AVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGD---ITDLAVSSNNALVA 299
           AV  A F  +G++++  + D  +K+ +  T   L    GH      IT     +N   + 
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274

Query: 300 SSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSD---DGTCRIW 355
           S S D  + +W L     +  L GHT AV +++  P  N +    SSS    D T RIW
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEI----SSSGNHLDKTIRIW 329


>At5g64730 unknown protein
          Length = 299

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 39/126 (30%), Positives = 65/126 (50%), Gaps = 4/126 (3%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           ++GH  AV  A F+  G Y +T   DR +++W+      + + + H  ++ D+ V+S+NA
Sbjct: 14  LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
              S   D  +  W +  G  I   RGH G V A+ F+   + V   +S+  D + R+WD
Sbjct: 74  KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVV---VSAGFDRSLRVWD 130

Query: 357 ARYTHS 362
            R +HS
Sbjct: 131 CR-SHS 135



 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 33/114 (28%), Positives = 56/114 (48%), Gaps = 5/114 (4%)

Query: 244 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI--TDLAVSSNNALVASS 301
           V C      G  V+ G  D  +++    T   L   +GH+     TD  +++++A V   
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246

Query: 302 SNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
           S D ++  W L D   +S  R H   VT++++ P+ +    +L+SS DGT R+W
Sbjct: 247 SEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC---MLTSSVDGTIRVW 297



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 21/60 (35%), Positives = 31/60 (51%)

Query: 252 SGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWR 311
           S  +VI GS+D LV  W +  A  L+  R H   +T ++       + +SS D  IRVW+
Sbjct: 239 SDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298



 Score = 31.6 bits (70), Expect = 0.85
 Identities = 43/188 (22%), Positives = 69/188 (35%), Gaps = 40/188 (21%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGD-------- 285
           I++ RGH   V    F+ S   V++   DR +++W          CR H  +        
Sbjct: 95  IRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW---------DCRSHSVEPVQIIDTF 145

Query: 286 -ITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLL 344
             T ++V      +   S D  +R + +  G  +S   G                    +
Sbjct: 146 LDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQP---------------VNCI 190

Query: 345 SSSDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVF 404
           S S+DG C +  A    ST RL       +TG         + +S +  CC  N++  V 
Sbjct: 191 SISNDGNCVL--AGCLDSTLRLL----DRTTGELLQVYKGHISKSFKTDCCLTNSDAHV- 243

Query: 405 VTGSSDNL 412
           + GS D L
Sbjct: 244 IGGSEDGL 251


>At5g16750 WD40-repeat protein
          Length = 876

 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           I G  + +         + + +    R +++W +ET   + S +GH G +  +A  ++  
Sbjct: 56  IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           L+A++  D  + VW +  G      RGH G V++I F P  N    L+S SDD T R+WD
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWD 174



 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 47/190 (24%), Positives = 83/190 (42%), Gaps = 35/190 (18%)

Query: 239 GHCNAVYCAIF-DRSGRYVITGSDDRLVKIWSME----------TAYSLASCRGHVGDIT 287
           GH   +    F  +S  + ++GS DR +K+WS++             + +    H  DI 
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503

Query: 288 DLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
            +AV+ N++LV + S D    +WRLPD + +  L+GH   + ++ FS     V   +++S
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCV---MTAS 560

Query: 348 DDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMP-QSHQIFCCAFNANGTVFVT 406
            D T +IW                      S G    T    +  +   +F  +GT FV+
Sbjct: 561 GDKTVKIW--------------------AISDGSCLKTFEGHTSSVLRASFITDGTQFVS 600

Query: 407 GSSDNLARVY 416
             +D L +++
Sbjct: 601 CGADGLLKLW 610



 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           +  H   +      R+   V TGS+DR   IW +     + + +GH   I  +  S+ + 
Sbjct: 495 VAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQ 554

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
            V ++S D  +++W + DG  +    GHT +V   +F        Q +S   DG  ++W+
Sbjct: 555 CVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT---QFVSCGADGLLKLWN 611



 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 9/135 (6%)

Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDIT 287
           ++ ++ I+  +GH   V       SG  + T   DR V +W ++  +     RGH G ++
Sbjct: 89  LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVS 148

Query: 288 DLAV--SSNNALVASSSNDYIIRVWRL----PDGLPISVLRGHTGAVTAIAFSPRPNAVY 341
            +     SN  ++ S S+D  +RVW L     +   ++++  H  AVT+IA S       
Sbjct: 149 SILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS---EDGL 205

Query: 342 QLLSSSDDGTCRIWD 356
            L S+  D    +WD
Sbjct: 206 TLFSAGRDKVVNLWD 220



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 263 RLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLR 322
           R+  + +M  +Y LA  +  V  +     SS N L+ + S D  +R+W       I V  
Sbjct: 384 RVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGT 443

Query: 323 GHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
           GH G + A+AF+ +  + +  +S S D T ++W
Sbjct: 444 GHNGDILAVAFAKKSFSFF--VSGSGDRTLKVW 474



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 24/123 (19%), Positives = 51/123 (40%), Gaps = 3/123 (2%)

Query: 233 NIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVS 292
           ++  ++GH   ++   F    + V+T S D+ VKIW++     L +  GH   +   +  
Sbjct: 533 HVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFI 592

Query: 293 SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
           ++     S   D ++++W +     I+    H   V A+A   +      + +   D   
Sbjct: 593 TDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTE---MIATGGGDAVI 649

Query: 353 RIW 355
            +W
Sbjct: 650 NLW 652



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 21/77 (27%), Positives = 39/77 (50%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           +K   GH ++V  A F   G   ++   D L+K+W++ T+  +A+   H   +  LAV  
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGK 635

Query: 294 NNALVASSSNDYIIRVW 310
              ++A+   D +I +W
Sbjct: 636 KTEMIATGGGDAVINLW 652



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/109 (23%), Positives = 47/109 (42%), Gaps = 4/109 (3%)

Query: 248 IFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYII 307
           I    G ++     D +  + S +++   ++  G    +T LA+S ++ L+ S+ +   I
Sbjct: 26  IVSSDGSFIACACGDVINIVDSTDSSVK-STIEGESDTLTALALSPDDKLLFSAGHSRQI 84

Query: 308 RVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           RVW L     I   +GH G V  +A          L ++  D    +WD
Sbjct: 85  RVWDLETLKCIRSWKGHEGPVMGMACHASGGL---LATAGADRKVLVWD 130


>At3g44530 WD repeat domain protein
          Length = 1051

 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 41/143 (28%), Positives = 72/143 (49%), Gaps = 20/143 (13%)

Query: 230 KMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWS-----------------MET 272
           K + +  +R H  +V C  + ++ RYV +GSDD++++I                   +E 
Sbjct: 48  KERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVEN 107

Query: 273 AYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIA 332
             ++ + RGH  D+ DL  S +++++AS S D  + +W +  G+  +VLRGH   V  + 
Sbjct: 108 WKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVT 167

Query: 333 FSPRPNAVYQLLSSSDDGTCRIW 355
           + P  + +    S SDD T  IW
Sbjct: 168 WDPIGSFI---ASQSDDKTVIIW 187



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/87 (26%), Positives = 39/87 (44%)

Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDIT 287
           V+  + +  +RGH   V    +      + +GS D  V IW+M T       RGH+  + 
Sbjct: 105 VENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVK 164

Query: 288 DLAVSSNNALVASSSNDYIIRVWRLPD 314
            +      + +AS S+D  + +WR  D
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIWRTSD 191


>At1g71840 unknown protein (At1g71840)
          Length = 407

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 42/130 (32%), Positives = 64/130 (48%), Gaps = 5/130 (3%)

Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGH---VGDITDLAVSSNN 295
           GH   V C  F   G+ + TGSDD  + +W+ +T  S+   +GH      +T L ++SN+
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNS 254

Query: 296 ALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
           +L  S S D  + +  +  G  +S L  HT +V  + FSP    +    +   D    IW
Sbjct: 255 SLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIW 314

Query: 356 DARYTHSTPR 365
           D +  HSTPR
Sbjct: 315 DLQ--HSTPR 322



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 238 RGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNAL 297
           +G   A+ C+  D +   V TG  D    +W +      A   GH   ++ LA S +  L
Sbjct: 70  KGELYALACSPTDAT--LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQL 127

Query: 298 VASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA 357
           +AS   D +++++    G    VL G    +  + + PR + V   L+ S+D +  +W+A
Sbjct: 128 LASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV---LAGSEDCSLWMWNA 184



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 29/127 (22%), Positives = 55/127 (42%), Gaps = 7/127 (5%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYV---ITGSDDRLVKIWSMETAYSLASCRGHVGDITDLA 290
           +  +  H ++V C  F  S   +    TG  D+ + IW ++ +     C  H   +T L 
Sbjct: 277 VSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE-HEEGVTSLT 335

Query: 291 VSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
               +  +A+   +  + +W    G  +    GH  AV AI+ S   + +   +S S D 
Sbjct: 336 WIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFI---VSVSVDN 392

Query: 351 TCRIWDA 357
           T R++++
Sbjct: 393 TARVFES 399


>At5g52820 Notchless protein homolog
          Length = 473

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 220 AIAKPSTMVQKMQNIKRIR----------GHCNAVYCAIFDRSGRYVITGSDDRLVKIWS 269
           ++ K  T+V + Q + RIR          GH  AV C  F   G+ + +GS D  V++W 
Sbjct: 78  SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137

Query: 270 METAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDG-LPISVLRGHTGAV 328
           + T   L +C+GH   +  +A S +   + S S    I  W    G L  S L GH   +
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197

Query: 329 TAIAFSP--RPNAVYQLLSSSDDGTCRIWD 356
           T I++ P    +   + ++SS DG  RIWD
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWD 227



 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
           KR+ GH   V    F   G+++ + S D+ V++W+  T   +   RGHVG +  ++ S++
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSAD 413

Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRI 354
           + L+ S S D  +++W +        L GH   V A+ +SP    V   +S   D   ++
Sbjct: 414 SRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV---VSGGKDRVLKL 470

Query: 355 W 355
           W
Sbjct: 471 W 471



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 23/162 (14%)

Query: 256 VITGSDDRLVKIWSMETAYSLAS-CRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPD 314
           +++GSDD  + +W    +        GH   +  +  S +   +AS+S D  +R+W    
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391

Query: 315 GLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDS 374
           G  ++V RGH G V  +++S        LLS S D T +IW+ R    T +L    P   
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRL---LLSGSKDSTLKIWEIR----TKKLKQDLPG-- 442

Query: 375 TGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
                         + ++F   ++ +G   V+G  D + +++
Sbjct: 443 -------------HADEVFAVDWSPDGEKVVSGGKDRVLKLW 471



 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 21/80 (26%), Positives = 37/80 (46%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
           Q +   RGH   VY   +    R +++GS D  +KIW + T        GH  ++  +  
Sbjct: 393 QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW 452

Query: 292 SSNNALVASSSNDYIIRVWR 311
           S +   V S   D ++++W+
Sbjct: 453 SPDGEKVVSGGKDRVLKLWK 472



 Score = 37.0 bits (84), Expect = 0.020
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 254 RYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLP 313
           R  +T S D   +IW +    S+    GH   +T +    +  ++ + S D  I++W   
Sbjct: 212 RRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETT 270

Query: 314 DGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCR 353
            G  I  L+GH   + ++A S      Y L + + D T R
Sbjct: 271 QGKLIRELKGHGHWINSLALSTE----YVLRTGAFDHTGR 306


>At2g43770 putative splicing factor
          Length = 343

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 23/184 (12%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSME-TAYSLASCRGHVGDITDLAVS 292
           I  + GH +AVY   F+ +G  + +GS DR + +W +     +    +GH   I DL  +
Sbjct: 46  IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105

Query: 293 SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
           S+ + + S+S D  +R W +  G  I  +  H+  V +    P       ++S SDDGT 
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCC--PTRRGPPLIISGSDDGTA 163

Query: 353 RIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNL 412
           ++WD R   +                      T P  +QI   +F+       TG  DN 
Sbjct: 164 KLWDMRQRGAI--------------------QTFPDKYQITAVSFSDAADKIFTGGVDND 203

Query: 413 ARVY 416
            +V+
Sbjct: 204 VKVW 207



 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 47/190 (24%), Positives = 81/190 (41%), Gaps = 16/190 (8%)

Query: 228 VQKMQNIKRIRGHCNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI 286
           V+  + IK++  H + V  C    R    +I+GSDD   K+W M    ++ +       I
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKY-QI 183

Query: 287 TDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSS 346
           T ++ S     + +   D  ++VW L  G     L GH   +T ++ S  P+  Y L + 
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS--PDGSYLLTNG 241

Query: 347 SDDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVT 406
            D+  C +WD        R Y P+ +       G   N       +  C+++ +GT    
Sbjct: 242 MDNKLC-VWDM-------RPYAPQ-NRCVKIFEGHQHNF---EKNLLKCSWSPDGTKVTA 289

Query: 407 GSSDNLARVY 416
           GSSD +  ++
Sbjct: 290 GSSDRMVHIW 299



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASC----RGHV 283
           ++K +    + GH + +        G Y++T   D  + +W M        C     GH 
Sbjct: 209 LRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQ 268

Query: 284 GD----ITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSP 335
            +    +   + S +   V + S+D ++ +W       I  L GHTG+V    F P
Sbjct: 269 HNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHP 324



 Score = 37.7 bits (86), Expect = 0.012
 Identities = 25/114 (21%), Positives = 48/114 (41%), Gaps = 7/114 (6%)

Query: 249 FDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIR 308
           F  +   + TG  D  VK+W +    +  +  GH   IT +++S + + + ++  D  + 
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLC 247

Query: 309 VWRL----PDGLPISVLRG--HTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           VW +    P    + +  G  H      +  S  P+   ++ + S D    IWD
Sbjct: 248 VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT-KVTAGSSDRMVHIWD 300



 Score = 35.8 bits (81), Expect = 0.045
 Identities = 17/63 (26%), Positives = 29/63 (45%), Gaps = 1/63 (1%)

Query: 242 NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASS 301
           N + C+ +   G  V  GS DR+V IW   +  ++    GH G + +        ++ S 
Sbjct: 274 NLLKCS-WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSC 332

Query: 302 SND 304
           S+D
Sbjct: 333 SSD 335


>At2g21390 coatomer alpha subunit
          Length = 1218

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 12/169 (7%)

Query: 188 TKANQVHGLHLREIGGGLPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHCNAVYCA 247
           TK+N+V GL           H + P I A+ ++        +    I R   H   V   
Sbjct: 7   TKSNRVKGLSF---------HPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGV 57

Query: 248 IFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYII 307
            F  S    ++G DD  +K+W+ +T   L +  GH+  I  +     N  + S+S+D  I
Sbjct: 58  HFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTI 117

Query: 308 RVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           R+W       ISVL GH   V   +F P+ + V   +S+S D T R+WD
Sbjct: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV---VSASLDQTVRVWD 163



 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 32/116 (27%), Positives = 54/116 (45%), Gaps = 5/116 (4%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMET--AYSLASCRGHVGDITDLAVSSN 294
           + GH   V  A F  +   +++G+DDR VK+W M    A+ + + RGH+ +++ +   + 
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259

Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
             ++ S+S D  IRVW       I   R        +A  P  N    L +  D+G
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINL---LAAGHDNG 312



 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 32/179 (17%)

Query: 208 HHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKI 267
           HH  P I +A           Q    I  + GH + V CA F      V++ S D+ V++
Sbjct: 102 HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161

Query: 268 WSMETAYSLASC---------------------------RGHVGDITDLAVSSNNALVAS 300
           W +      ++                             GH   +   +      L+ S
Sbjct: 162 WDIGALKKKSASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVS 221

Query: 301 SSNDYIIRVWRLPD--GLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA 357
            ++D  +++WR+ +     +  LRGH   V+++ F  + + +   +S+S+D + R+WDA
Sbjct: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII---VSNSEDKSIRVWDA 277



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 32/162 (19%), Positives = 61/162 (36%), Gaps = 22/162 (13%)

Query: 255 YVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPD 314
           +++      ++++W       +     H G +  +   ++  L  S  +DY I+VW    
Sbjct: 23  WILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKT 82

Query: 315 GLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDS 374
              +  L GH   +  + F      +   +S+SDD T RIW+                  
Sbjct: 83  HRCLFTLLGHLDYIRTVQFHHENPWI---VSASDDQTIRIWN------------------ 121

Query: 375 TGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
             +S    S     +H + C +F+    + V+ S D   RV+
Sbjct: 122 -WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 230 KMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDL 289
           K   +  +RGH N V   +F      +++ S+D+ +++W       + + R        L
Sbjct: 237 KAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWIL 296

Query: 290 AVSSNNALVASSSNDYIIRVWRLPDGLPISVLRG 323
           AV     L+A+  ++ +I V++L    P   L G
Sbjct: 297 AVHPEINLLAAGHDNGMI-VFKLERERPAFALSG 329


>At1g18080   putative guanine nucleotide-binding protein beta
           subunit
          Length = 327

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 49/183 (26%), Positives = 91/183 (48%), Gaps = 13/183 (7%)

Query: 239 GHCNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           GH + V C  F  +     +++ S D+ VK+W++      ++  GH G ++ +AVS + +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           L AS   D ++ +W L +G  +  L  ++  + A+ FSP     Y L ++++ G  +IWD
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANS-VIHALCFSPNR---YWLCAATEHG-IKIWD 262

Query: 357 ARYTHSTPRLYVP-KPSDSTGRSSGPSSNTMPQSHQIFCCAFN--ANGTVFVTGSSDNLA 413
                    L V  K       +SGP++    +   I+C + N  A+G+   +G +D + 
Sbjct: 263 LESKSIVEDLKVDLKAEAEKADNSGPAAT---KRKVIYCTSLNWSADGSTLFSGYTDGVI 319

Query: 414 RVY 416
           RV+
Sbjct: 320 RVW 322



 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
           +R+ GH + V   +    G++ ++GS D  +++W +    S     GH  D+  +A S +
Sbjct: 57  RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116

Query: 295 NALVASSSNDYIIRVWRLPDGLPISVL---RGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
           N  + S+S D  I++W        ++     GH   V+ + FSP       ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN-TLQPTIVSASWDKT 175

Query: 352 CRIWD 356
            ++W+
Sbjct: 176 VKVWN 180



 Score = 35.0 bits (79), Expect = 0.077
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 280 RGHVGDITDLAVSSNNA-LVASSSNDYIIRVWRLPD-----GLPISVLRGHTGAVTAIAF 333
           R H   +T +A   +NA ++ S+S D  I +W+L       G+    L GH+  V  +  
Sbjct: 12  RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL 71

Query: 334 SPRPNAVYQLLSSSDDGTCRIWDARYTHSTPR 365
           S         LS S DG  R+WD     ST R
Sbjct: 72  SSDGQFA---LSGSWDGELRLWDLAAGVSTRR 100


>At3g18130 protein kinase C-receptor/G-protein, putative
          Length = 326

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 48/182 (26%), Positives = 84/182 (45%), Gaps = 11/182 (6%)

Query: 239 GHCNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           GH   V C  F  +     +++ S D+ VK+W+++      S  GH G +  +AVS + +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           L AS   D +I +W L +G  +  L   +  + ++ FSP        L ++ + + RIWD
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPN----RYWLCAATENSIRIWD 261

Query: 357 ARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFN--ANGTVFVTGSSDNLAR 414
                    L V   S++     G  +    Q   I+C + N  A+G+   +G +D + R
Sbjct: 262 LESKSVVEDLKVDLKSEAEKNEGGVGTGN--QKKVIYCTSLNWSADGSTLFSGYTDGVVR 319

Query: 415 VY 416
           V+
Sbjct: 320 VW 321



 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
           +R+ GH + V   +    G++ ++GS D  +++W + T  +     GH  D+  +A S++
Sbjct: 57  RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116

Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLR--GHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
           N  + S+S D  I++W        ++    GH   V+ + FSP    V  ++S+S D T 
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPN-TLVPTIVSASWDKTV 175

Query: 353 RIWD 356
           ++W+
Sbjct: 176 KVWN 179



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 10/100 (10%)

Query: 280 RGHVGDITDLAVSSNNA-LVASSSNDYIIRVWRLPD-----GLPISVLRGHTGAVTAIAF 333
           R H   +T +A   +N+ ++ ++S D  I +W+L       G+    L GH+  V  +  
Sbjct: 12  RAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVL 71

Query: 334 SPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSD 373
           S         LS S DG  R+WD   T  T R +V    D
Sbjct: 72  SSDGQFA---LSGSWDGELRLWDLA-TGETTRRFVGHTKD 107


>At5g25150 transcription initiation factor IID-associated
           factor-like protein
          Length = 700

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 10/137 (7%)

Query: 233 NIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVS 292
           N+   +GH   V+ A F   G Y  + S DR  +IWSM+    L    GH+ D+      
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD---WH 508

Query: 293 SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
            N   +A+ S+D  +R+W +  G  + +  GH   V ++A SP       + S  +DGT 
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR---YMASGDEDGTI 565

Query: 353 RIWDARYTHSTPRLYVP 369
            +WD     ST R   P
Sbjct: 566 MMWDL----STARCITP 578



 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALV 298
           GH   VY A F   G +V++ S D  +++WS +   +L   +GH   + D   S      
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475

Query: 299 ASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
           AS S+D   R+W +    P+ ++ GH   V        PN  Y + + S D T R+WD +
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDV-----DWHPNCNY-IATGSSDKTVRLWDVQ 529

Query: 359 YTHSTPRLYVPKPSDSTGRSSGPSSNTM 386
            T    R+++   S     +  P    M
Sbjct: 530 -TGECVRIFIGHRSMVLSLAMSPDGRYM 556



 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDIT 287
           + ++Q ++ + GH + V    +  +  Y+ TGS D+ V++W ++T   +    GH   + 
Sbjct: 489 MDRIQPLRIMAGHLSDVD---WHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVL 545

Query: 288 DLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAF 333
            LA+S +   +AS   D  I +W L     I+ L GH   V ++++
Sbjct: 546 SLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 591



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 36/140 (25%), Positives = 47/140 (32%), Gaps = 31/140 (22%)

Query: 242 NAVYCAIFDRSGRYVITGSDDRLVKIWSM--------------------------ETAYS 275
           N + C+     G  V  G  D  +K+W M                            +Y+
Sbjct: 353 NGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYT 412

Query: 276 LASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSP 335
           L    GH G +     S     V SSS D  IR+W       +   +GH   V    FSP
Sbjct: 413 L--LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSP 470

Query: 336 RPNAVYQLLSSSDDGTCRIW 355
                +   S S D T RIW
Sbjct: 471 ---FGHYFASCSHDRTARIW 487


>At1g73720 unknown protein
          Length = 511

 Score = 65.5 bits (158), Expect = 5e-11
 Identities = 43/168 (25%), Positives = 76/168 (44%), Gaps = 9/168 (5%)

Query: 240 HCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVA 299
           H + V C  F R    + +GS D  +KIW + T   +     H   +T L+ S + + + 
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321

Query: 300 SSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARY 359
           S+S D   R+  L  G  +   RGHT  V    F+   +   +++++S D T ++WD++ 
Sbjct: 322 STSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS---RIITASSDCTVKVWDSKT 378

Query: 360 THSTPRLYVPKPSDSTGRSSGPSSNTMPQS--HQIFCCAFNANGTVFV 405
           T        P P   T  S   S +  P++  H + C   N   ++++
Sbjct: 379 TDCLQTFKPPPPLRGTDASVN-SIHLFPKNTEHIVVC---NKTSSIYI 422



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 11/117 (9%)

Query: 246 CAIFDRSGRYVITGSDDRLVKIW-------SMETAYSL-ASCRGHVGDITDLAVSSNNAL 297
           CA F   G+++ + S D  +++W         +  Y    S   H   +  +  S ++ +
Sbjct: 218 CARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEM 277

Query: 298 VASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRI 354
           +AS S D  I++WR+  G+ I     H+  VT+++FS   +   QLLS+S D T RI
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGS---QLLSTSFDQTARI 331



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           I+R   H   V    F R G  +++ S D+  +I  +++   L   RGH   +     +S
Sbjct: 298 IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTS 357

Query: 294 NNALVASSSNDYIIRVW--RLPDGL----PISVLRGHTGAVTAIAFSPR 336
           + + + ++S+D  ++VW  +  D L    P   LRG   +V +I   P+
Sbjct: 358 DGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPK 406


>At1g48630 unknown protein
          Length = 326

 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
           +R+ GH + V   +    G++ ++GS D  +++W + T  S     GH  D+  +A S++
Sbjct: 57  RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116

Query: 295 NALVASSSNDYIIRVWRL--PDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
           N  + S+S D  I++W         IS   GH   V+ + FSP    V  ++S+S D T 
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPN-TLVPTIVSASWDKTV 175

Query: 353 RIWD 356
           ++W+
Sbjct: 176 KVWN 179



 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 225 STMVQKMQNIKRIRGHCNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYSLASCRGH 282
           +T+ +    I    GH   V C  F  +     +++ S D+ VK+W+++      +  GH
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192

Query: 283 VGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQ 342
            G +  +AVS + +L AS   D +I +W L +G  +  L   +  + ++ FSP       
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPN----RY 247

Query: 343 LLSSSDDGTCRIWDARYTHSTPRLYV--PKPSDSTGRSSGPSSNTMPQSHQIFCCAFN-- 398
            L ++ + + RIWD         L V     ++ T  S+G  + T      I+C + N  
Sbjct: 248 WLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKT----KVIYCTSLNWS 303

Query: 399 ANGTVFVTGSSDNLARVY 416
           A+G    +G +D + RV+
Sbjct: 304 ADGNTLFSGYTDGVIRVW 321



 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 35/129 (27%), Positives = 62/129 (47%), Gaps = 7/129 (5%)

Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSM--ETAYSLASCRGHVGDITDL 289
           ++ +R  GH   V    F    R +++ S DR +K+W+   E  Y+++   GH   ++ +
Sbjct: 96  ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCV 155

Query: 290 AVSSNNAL--VASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
             S N  +  + S+S D  ++VW L +    + L GH+G +  +A SP  +      S  
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSL---CASGG 212

Query: 348 DDGTCRIWD 356
            DG   +WD
Sbjct: 213 KDGVILLWD 221



 Score = 32.0 bits (71), Expect = 0.65
 Identities = 26/90 (28%), Positives = 40/90 (43%), Gaps = 9/90 (10%)

Query: 282 HVGDITDLAVSSNNA-LVASSSNDYIIRVWRLPD-----GLPISVLRGHTGAVTAIAFSP 335
           H   +T +A   +N+ ++ +SS D  I +W+L       G+    + GH+  V  +  S 
Sbjct: 14  HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73

Query: 336 RPNAVYQLLSSSDDGTCRIWDARYTHSTPR 365
                   LS S DG  R+WD     ST R
Sbjct: 74  DGQFA---LSGSWDGELRLWDLATGESTRR 100


>At1g15440 unknown protein
          Length = 900

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 41/138 (29%), Positives = 68/138 (48%), Gaps = 11/138 (7%)

Query: 247 AIFDRSGRYVITGSDDR-LVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDY 305
           A+F+  G ++  G      + +W   T   +   +GH  D+  +  S ++ L+A+ ++D 
Sbjct: 352 AVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDN 411

Query: 306 IIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR------- 358
            ++VW +  G        HT AVTA+ F    ++   LLS+S DGT R WD +       
Sbjct: 412 KVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS---LLSASLDGTVRAWDFKRYKNYKT 468

Query: 359 YTHSTPRLYVPKPSDSTG 376
           YT  TPR +V   +D +G
Sbjct: 469 YTTPTPRQFVSLTADPSG 486



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 250 DRSGRYVITGSDDRL-VKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIR 308
           D SG  V  G+ D   + +WS +T        GH   +  L  S    L+ASSS DY +R
Sbjct: 483 DPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVR 542

Query: 309 VWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
           +W +           H   V  +AF P      QL SS+ DG    WD
Sbjct: 543 LWDVFASKGTVETFRHNHDVLTVAFRPDGK---QLASSTLDGQINFWD 587



 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 49/168 (29%)

Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
           I + +GH   V C  +    + + TG+DD  VK+W++ +     +   H   +T L   +
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441

Query: 294 NNALVASSSNDYIIR--------------------------------------------V 309
           +N  + S+S D  +R                                            V
Sbjct: 442 DNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFV 501

Query: 310 WRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSD-DGTCRIWD 356
           W    G    +L GH   V  + FSP    + QLL+SS  D T R+WD
Sbjct: 502 WSKKTGQIKDILSGHEAPVHGLMFSP----LTQLLASSSWDYTVRLWD 545



 Score = 31.6 bits (70), Expect = 0.85
 Identities = 24/116 (20%), Positives = 47/116 (39%), Gaps = 5/116 (4%)

Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
           + GH   V+  +F    + + + S D  V++W +  +        H  D+  +A   +  
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572

Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
            +ASS+ D  I  W   +G+ +  + G          + R +A     ++S  G C
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMTDRRSA-----ANSSSGKC 623


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.134    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,393,276
Number of Sequences: 26719
Number of extensions: 476257
Number of successful extensions: 2239
Number of sequences better than 10.0: 197
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1284
Number of HSP's gapped (non-prelim): 708
length of query: 417
length of database: 11,318,596
effective HSP length: 102
effective length of query: 315
effective length of database: 8,593,258
effective search space: 2706876270
effective search space used: 2706876270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)