Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144539.1 + phase: 0 
         (163 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g17020 unknown protein                                             196  5e-51
At3g53990 unknown protein                                             151  2e-37
At3g03270 unknown protein                                             140  3e-34
At3g62550 unknown protein                                              84  3e-17
At1g11360 unknown protein                                              79  8e-16
At3g11930 unknown protein                                              79  1e-15
At1g68300 unknown protein                                              77  5e-15
At1g09740 putative ER6 protein                                         76  9e-15
At5g54430 unknown protein                                              67  4e-12
At4g27320 unknown protein                                              65  2e-11
At2g47710 unknown protein                                              57  6e-09
At5g14680 unknown protein                                              54  3e-08
At3g01520 unknown protein                                              52  1e-07
At3g58450 putative protein                                             49  9e-07
At3g21210 unknown protein                                              48  2e-06
At2g21620 RD2 protein (RD2)                                            44  4e-05
At2g07020 putative protein kinase                                      35  0.018
At4g31230 putative protein                                             32  0.20
At2g24370 putative protein kinase                                      30  0.44
At1g16760 hypothetical protein                                         30  0.57

>At3g17020 unknown protein
          Length = 163

 Score =  196 bits (498), Expect = 5e-51
 Identities = 91/158 (57%), Positives = 117/158 (73%), Gaps = 1/158 (0%)

Query: 2   ASARRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPE-EYEHGEMQLWEVTGSPL 60
           +  RR+G+A+DFS CS KA  W +DN+V++GD+LILI I  +  YE GEMQLWE  GSP 
Sbjct: 4   SGGRRIGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPF 63

Query: 61  TPLGEFINSDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPL 120
            P+ EF ++ + KKY +K D E L I  TA  +K + V++K+YWGD REK+C A EQ+PL
Sbjct: 64  IPMSEFSDAAVMKKYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPL 123

Query: 121 DGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVKS 158
             L MGNRGLG L+R IMGSVSN+VVNN +CPVTVVK+
Sbjct: 124 SSLVMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVKA 161


>At3g53990 unknown protein
          Length = 160

 Score =  151 bits (381), Expect = 2e-37
 Identities = 73/159 (45%), Positives = 103/159 (63%)

Query: 1   MASARRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPL 60
           M   R +GIAMDFS  S  A +W ++N+  +GD + +I   P   +     LW  +GSPL
Sbjct: 1   MPKDRNIGIAMDFSESSKNALKWAIENLADKGDTIYIIHTLPLSGDESRNSLWFKSGSPL 60

Query: 61  TPLGEFINSDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPL 120
            PL EF   ++ +KY +KTD   L +  T   QK+V V+ K+YWGDAREKL +A++ + L
Sbjct: 61  IPLAEFREPEIMEKYGVKTDIACLDMLDTGSRQKEVHVVTKLYWGDAREKLVDAVKDLKL 120

Query: 121 DGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVKSS 159
           D + MG+RGL  L+R IMGSVS++V+ +A CPVTVVK +
Sbjct: 121 DSIVMGSRGLSALQRIIMGSVSSFVIQHAPCPVTVVKDN 159


>At3g03270 unknown protein
          Length = 201

 Score =  140 bits (353), Expect = 3e-34
 Identities = 65/135 (48%), Positives = 93/135 (68%)

Query: 1   MASARRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPL 60
           M  AR +G+ MD+SP S  A +W  +N++++GD +ILI ++P+  +H    L+E TGSPL
Sbjct: 1   MGKARTVGVGMDYSPTSKLALRWAAENLLEDGDTVILIHVQPQNADHTRKILFEETGSPL 60

Query: 61  TPLGEFINSDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPL 120
            PL EF   +L K+Y +  DPEVL +  T    KKV V+ KVYWGD REKLC+A+E + L
Sbjct: 61  IPLEEFREVNLSKQYGLAYDPEVLDVLDTLSRAKKVKVVAKVYWGDPREKLCDAVENLKL 120

Query: 121 DGLTMGNRGLGTLRR 135
           D + +G+RGLG+L+R
Sbjct: 121 DSIVLGSRGLGSLKR 135


>At3g62550 unknown protein
          Length = 162

 Score = 84.3 bits (207), Expect = 3e-17
 Identities = 52/163 (31%), Positives = 86/163 (51%), Gaps = 15/163 (9%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKEGDN--LILIIIRPE--EYEHGEMQLWEVTGSPL 60
           R++ +A+D S  S++A  W++DN+   G N  LIL+ ++P    Y   +   + VTG P+
Sbjct: 7   RKIVVAVDESEESMEALSWSLDNLFPYGSNNTLILLYVKPPLPVYSSLDAAGFIVTGDPV 66

Query: 61  TPLGEFINSDLPKKYEIKTDPEVLKIATTAIE--QKKVVVLVKVYWGDAREKLCEAIEQV 118
             L         KKYE +    V+  + T  +  +  + +  +V  GDA+E +C A++++
Sbjct: 67  AAL---------KKYEYELVESVMARSRTVYQDYESDINIERRVGRGDAKEVICNAVQKL 117

Query: 119 PLDGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVKSSGQ 161
            +D L MG    G  +RA++GSVS Y      CPV +VK   Q
Sbjct: 118 RVDMLVMGTHDYGFFKRALLGSVSEYCAKRVKCPVVIVKKQAQ 160


>At1g11360 unknown protein
          Length = 242

 Score = 79.3 bits (194), Expect = 8e-16
 Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLG 64
           R++GIA+D S  S  A QW V N ++ GD ++L+ ++P    +G             P  
Sbjct: 38  RKIGIAVDLSDESAYAVQWAVQNYLRSGDAVVLLHVQPTSVLYGADWGAMDLSPQWDPNN 97

Query: 65  EFINSDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPLDGLT 124
           E     L   ++I T+ +   +A   +E      +  V   D +E+LC  +E++ L  L 
Sbjct: 98  EESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMKERLCLEVERLGLSTLI 157

Query: 125 MGNRGLGTLRRAI---MGSVSNYVVNNASCPVTVVK 157
           MG+RG G  +R+    +GSVS+Y V++ +CPV VV+
Sbjct: 158 MGSRGFGATKRSSKGRLGSVSDYSVHHCACPVVVVR 193


>At3g11930 unknown protein
          Length = 200

 Score = 79.0 bits (193), Expect = 1e-15
 Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 18/168 (10%)

Query: 3   SARRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGS---- 58
           + +R+ +A+D S  S  A QW +D+        +L+     E E G + +  V       
Sbjct: 31  TTKRMVVAIDESDSSFYALQWVIDHFSN-----LLLTTAAAEAESGMLTVIHVQSPFNHF 85

Query: 59  ---PLTPLGE---FINSDL---PKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDARE 109
              P  P G    + +S +    KK + +T   +L  A      K++     V  G+A+E
Sbjct: 86  AAFPAGPGGATAVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIRTETLVLEGEAKE 145

Query: 110 KLCEAIEQVPLDGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVK 157
            +CEA+E++ +D L +G+RGLG ++RA +GSVS+Y  ++A+CP+ +VK
Sbjct: 146 MICEAVEKMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVK 193


>At1g68300 unknown protein
          Length = 160

 Score = 76.6 bits (187), Expect = 5e-15
 Identities = 54/159 (33%), Positives = 87/159 (53%), Gaps = 15/159 (9%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKE--GDNLILIIIRPEEYEHGEMQLWEVTGSPLTP 62
           +++ +A+D S CS +A QWT+  +       ++IL   +P    H ++     +     P
Sbjct: 10  KQVMVAIDESECSKRALQWTLVYLKDSLADSDIILFTAQP----HLDLSCVYASSYGAAP 65

Query: 63  LGEFINS--DLPKKYEIKTDPEVLKI-ATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVP 119
           + E INS  +  K   +    E  KI A T +  +KV+      +G+ +E +CEA E++ 
Sbjct: 66  I-ELINSLQESHKNAGLNRLDEGTKICAETGVTPRKVLE-----FGNPKEAICEAAEKLG 119

Query: 120 LDGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVKS 158
           +D L +G+ G G L+R  +GSVSNY VNNA CPV VV++
Sbjct: 120 VDMLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVVRT 158


>At1g09740 putative ER6 protein
          Length = 171

 Score = 75.9 bits (185), Expect = 9e-15
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 18/160 (11%)

Query: 9   IAMDFSPCSIKAFQWTVDNIV----KEGDNLILIIIRPEEYEHGEMQLWEVTGSPLT-PL 63
           +A+D S  S++A +W +DN+         + +++ ++P       +       SP T P 
Sbjct: 12  VAVDGSEVSMEALRWALDNLKLSSSSSDSSFVVLHVQPSPSVAAGV-------SPGTIPF 64

Query: 64  GEFINSDLP------KKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQ 117
           G     ++P      ++++ +    +L+ A+    +K V V  +V  GD + K+CEA+E 
Sbjct: 65  GGPSGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSVNVKTQVVIGDPKYKICEAVEN 124

Query: 118 VPLDGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVK 157
           +  D L MG+R  G ++R  +GSVSNY  N+A CPV ++K
Sbjct: 125 LHADLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 164


>At5g54430 unknown protein
          Length = 250

 Score = 67.0 bits (162), Expect = 4e-12
 Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 17/163 (10%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLG 64
           R++G+A+D S  S  A +W VD+ ++ GD ++L+ + P         L+     PL PL 
Sbjct: 48  RKIGVAVDLSEESSFAVRWAVDHYIRPGDAVVLLHVSPTSV------LFGADWGPL-PLK 100

Query: 65  EFINSDLPKKYEIKTDPEVL---KIATTAIEQKKVVVLVKVYW---GDAREKLCEAIEQV 118
             I     +    + D +     K+A  A   K++    K++     D RE+LC  IE++
Sbjct: 101 TQIEDPNAQPQPSQEDFDAFTSTKVADLAKPLKELGFPYKIHIVKDHDMRERLCLEIERL 160

Query: 119 PLDGLTMGNRGLGTLRR----AIMGSVSNYVVNNASCPVTVVK 157
            L  + MG+RG G  ++      +GSVS+Y V++  CPV VV+
Sbjct: 161 GLSAVIMGSRGFGAEKKRGSDGKLGSVSDYCVHHCVCPVVVVR 203


>At4g27320 unknown protein
          Length = 260

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 47/160 (29%), Positives = 77/160 (47%), Gaps = 7/160 (4%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLG 64
           R++G+A+D S  S  A +W VD+ ++ GD ++++ + P     G         +P  P  
Sbjct: 45  RKIGVAVDLSEESAFAVRWAVDHYIRPGDAVVILHVSPTSVLFGADWGPLPLQTPPPPSA 104

Query: 65  EFINSDLPK----KYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPL 120
                  PK     ++  T  +V  +A    E      +  V   D RE+LC   E++ L
Sbjct: 105 ATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPHKIHIVKDHDMRERLCLETERLNL 164

Query: 121 DGLTMGNRGLGTLRRAI---MGSVSNYVVNNASCPVTVVK 157
             + MG+RG G  +R     +GSVS+Y V++  CPV VV+
Sbjct: 165 SAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHCVCPVVVVR 204


>At2g47710 unknown protein
          Length = 162

 Score = 56.6 bits (135), Expect = 6e-09
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 8/86 (9%)

Query: 80  DPEVLKIATTAIEQKKVV--------VLVKVYWGDAREKLCEAIEQVPLDGLTMGNRGLG 131
           D ++   A   +E+ K +         +++V+ GDAR  LCE +++     L +G+ G G
Sbjct: 71  DADLKHTAAKVVEKAKAICQSRSVHGAVIEVFEGDARNILCEVVDKHHASILVVGSHGYG 130

Query: 132 TLRRAIMGSVSNYVVNNASCPVTVVK 157
            ++RA++GS S+Y  ++A C V +VK
Sbjct: 131 AIKRAVLGSTSDYCAHHAHCSVMIVK 156


>At5g14680 unknown protein
          Length = 175

 Score = 54.3 bits (129), Expect = 3e-08
 Identities = 39/151 (25%), Positives = 74/151 (48%), Gaps = 17/151 (11%)

Query: 17  SIKAFQWTVDNIVKE---GDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLGEFINSDLPK 73
           S KAF+WT+  IV+    G  L+L+ ++ ++ E G   +  +  SP          D  +
Sbjct: 27  SKKAFEWTLKKIVRSNTSGFKLLLLHVQVQD-EDGFDDMDSIYASP----------DDFR 75

Query: 74  KYEIKTDPEVLKIATTAIEQKKVVVLVKVYW---GDAREKLCEAIEQVPLDGLTMGNRGL 130
           +   +   + L +    +++   + +    W   GD  E +C  + +V  D L +G+RGL
Sbjct: 76  QMRERNKAKGLHLLEFFVKKCHDIGVGCEAWIRKGDPTELICHEVRRVRPDFLVVGSRGL 135

Query: 131 GTLRRAIMGSVSNYVVNNASCPVTVVKSSGQ 161
           G  ++  +G+VS + V +A CPV  +K + +
Sbjct: 136 GPFQKVFVGTVSEFCVKHAECPVITIKRTAE 166


>At3g01520 unknown protein
          Length = 175

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 38/141 (26%), Positives = 71/141 (49%), Gaps = 9/141 (6%)

Query: 19  KAFQWTVDNIVKEG--DNLILIIIRPEEYEHGEMQLWEVTGSPLTPLGEFINSDLPKKYE 76
           +AF+WT++ IV+    D  IL++      E G   +  +  SP     +F   D+ +  +
Sbjct: 29  RAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASP----EDF--RDMRQSNK 82

Query: 77  IKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPLDGLTMGNRGLGTLRRA 136
            K    +L+       +  V     +  GD ++ +C+ +++V  D L +G+RGLG  ++ 
Sbjct: 83  AK-GLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKV 141

Query: 137 IMGSVSNYVVNNASCPVTVVK 157
            +G+VS + V +A CPV  +K
Sbjct: 142 FVGTVSAFCVKHAECPVMTIK 162


>At3g58450 putative protein
          Length = 174

 Score = 49.3 bits (116), Expect = 9e-07
 Identities = 36/140 (25%), Positives = 63/140 (44%), Gaps = 20/140 (14%)

Query: 9   IAMDFSPCSIKAFQWTVDNIV----------KEGDNLILIIIRPEEYEHGEMQLWEVTGS 58
           +A+D S  S  A +W VD++           +EG  L L+ + P   ++       +  S
Sbjct: 34  VAIDESKNSFDALEWAVDHLRVVISAEPETGQEGGLLTLLHVHPTYLQY-------IYPS 86

Query: 59  PLTPLGEFINSDLPKKYEIKTDPEVLKIATTAIE---QKKVVVLVKVYWGDAREKLCEAI 115
             T    +    +P+      +     + T A+E    K V     +  GD +E +C+A+
Sbjct: 87  GGTASAVYATDSVPEPMRKAREESTTNLFTRALEICRGKMVKTETMILEGDPKEMICQAV 146

Query: 116 EQVPLDGLTMGNRGLGTLRR 135
           EQ  +D L +G+RGLG ++R
Sbjct: 147 EQTHVDLLVVGSRGLGMIKR 166


>At3g21210 unknown protein
          Length = 686

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 35/160 (21%)

Query: 5   RRLGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRP------EEYEHGEMQLWEVTGS 58
           R++GIA++ S  S    +W VDN +++GD++I++ + P       ++ +  +Q    T  
Sbjct: 15  RKIGIAVELSEESAFTVRWAVDNYIRQGDDIIILHVSPTAGLFGADWGYYPLQ----TQP 70

Query: 59  PLTPLGEFIN-SDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQ 117
           P T    F   +DL K  +    P  +               VK Y  D RE+LC   ++
Sbjct: 71  PYTTASIFSKVADLGKPLKEAGFPHTIH-------------TVKDY--DKRERLCLETQR 115

Query: 118 VPLDGLTMGNRGLGTLRRAIMGSVSNYVVNNASCPVTVVK 157
           + L  L MG            GSVS++ V++  C V VV+
Sbjct: 116 LNLTALIMGFGD---------GSVSDFCVHHCVCQVVVVR 146


>At2g21620 RD2 protein (RD2)
          Length = 187

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 85  KIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPLDGLTMGNRGLGTLRRAIMGSVSNY 144
           K+A  A +   V  + +V  GDA + +C+  E+V    + +G RG   +R  + GSVS Y
Sbjct: 94  KLAVEAYQVAMVKSVARVVEGDAGKVICKEAEKVKPAAVIVGTRGRSLVRSVLQGSVSEY 153

Query: 145 VVNNA-SCPVTVV 156
             +N  S PV +V
Sbjct: 154 CFHNCKSAPVIIV 166


>At2g07020 putative protein kinase
          Length = 620

 Score = 35.0 bits (79), Expect = 0.018
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 7   LGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLGEF 66
           + IA+D    S  A +W VDN++  G+ L LI ++ +       Q     G+     G+ 
Sbjct: 11  VAIAIDRDKGSQAALKWAVDNLLTPGETLTLIHVKVK-------QTLANNGTQPNKSGDD 63

Query: 67  INSDLPKKYEIKTDPEVLKIATTAIEQKKV----VVLVKVYWGDAREKLCEAIEQVPLDG 122
           +  +L   +      + +  A+  I   K+    VVL  V   DA E + E +++  +D 
Sbjct: 64  V-KELFLPFRCFCTRKDVSFASNFINLLKINCEEVVLENV---DAAEGIIEYVQENAIDI 119

Query: 123 LTMGNRGLGTLRRAIMGSVSNYVVNNA 149
           L +G   +  L+R     V+N V+  A
Sbjct: 120 LVLGASKITLLKRLKAVDVTNAVIKGA 146


>At4g31230 putative protein
          Length = 537

 Score = 31.6 bits (70), Expect = 0.20
 Identities = 11/36 (30%), Positives = 24/36 (66%)

Query: 7  LGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRP 42
          + +A+D    S  A +W VDN++++G  ++L+ ++P
Sbjct: 18 VAVAIDRDKNSQGALKWAVDNLLQKGQTVVLVHVKP 53


>At2g24370 putative protein kinase
          Length = 816

 Score = 30.4 bits (67), Expect = 0.44
 Identities = 11/35 (31%), Positives = 23/35 (65%)

Query: 7  LGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIR 41
          + +A+D    S  A +W VDN+++ G ++IL+ ++
Sbjct: 20 VAVAIDKDKSSQHALKWAVDNLLQRGQSVILVHVK 54


>At1g16760 hypothetical protein
          Length = 758

 Score = 30.0 bits (66), Expect = 0.57
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 7  LGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPE 43
          + IA+D    S  A +WT++N+   G  L LI + P+
Sbjct: 18 VAIAIDKDKSSQNAIKWTLENLATRGQTLALIHVLPK 54


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,544,768
Number of Sequences: 26719
Number of extensions: 141810
Number of successful extensions: 361
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 314
Number of HSP's gapped (non-prelim): 38
length of query: 163
length of database: 11,318,596
effective HSP length: 92
effective length of query: 71
effective length of database: 8,860,448
effective search space: 629091808
effective search space used: 629091808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)


Medicago: description of AC144539.1