BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144538.1 - phase: 0 /pseudo
(942 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g32890 Athila ORF 1, putative 276 5e-74
At4g08050 271 1e-72
At3g32000 unknown protein 261 1e-69
At1g37060 Athila retroelment ORF 1, putative 259 4e-69
At2g10670 pseudogene 255 7e-68
At4g07640 putative athila transposon protein 255 9e-68
At3g31340 Athila ORF 1, putative 237 2e-62
At2g06160 putative Athila retroelement ORF1 protein 234 2e-61
At3g30655 hypothetical protein, 3' partial 225 8e-59
At2g07480 F9A16.15 187 3e-47
At3g30630 hypothetical protein 184 2e-46
At3g31500 hypothetical protein 162 1e-39
At4g03790 putative athila-like protein 147 2e-35
At2g10620 putative Athila retroelement ORF1 protein 142 7e-34
At1g37070 hypothetical protein 142 7e-34
At1g38440 hypothetical protein 141 2e-33
At1g41690 hypothetical protein 137 3e-32
At1g36560 hypothetical protein 137 3e-32
At4g07370 136 5e-32
At4g07600 136 6e-32
>At3g32890 Athila ORF 1, putative
Length = 755
Score = 276 bits (705), Expect = 5e-74
Identities = 210/655 (32%), Positives = 320/655 (48%), Gaps = 78/655 (11%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W +L SIT+
Sbjct: 7 FHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITT 66
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFL++F ++TA+LR++I+ F+QK ES EA ERFK CPHHG K +
Sbjct: 67 WDDCKKAFLSKFFSNARTARLRNEISGFSQKTRESFCEAWERFKGYTNQCPHHGFTKASL 126
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQNHYQWTNERAVTTPTPSKK 502
+ T Y G+ +M +D ++ G NK+ E + L+E++AQ+ + +
Sbjct: 127 LSTLYRGVLLRIRMLLDTSSNGNFQNKDVEEGWELVENLAQSDGNYNEDCDRNEIKALND 186
Query: 503 EAGIYEVSEYNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTG--------- 553
+ + +S+ H+ V+ +++ N + EV I + G
Sbjct: 187 KLDMILLSQQKHVHFLVDDKQFQVQYGEGNQLE--------EVSYIINNQGGYKGYNNFK 238
Query: 554 -----VDCQLGSAANIEQLNYAQ------YNQGMRPNQNFYKNPQGSYGQTAPPGYTNNQ 602
+ + + AN Q Q YNQG P Q F QG+Y PPG+T Q
Sbjct: 239 TNNPNLSYRSTNVANPPQQQQGQNKPFVPYNQGFVPKQQF----QGNYQPPPPPGFTTQQ 294
Query: 603 R-------VAQKSSLEILLE---NCMMNQNKQLQELKNQTGSLNDSLSKLNTKVDSIATH 652
K ++ LLE + M K+L EL ++ L+ S + +N KV+++ T
Sbjct: 295 NQGPAAPDAEMKQMVQQLLEVQASSSMEIAKKLSELHHK---LDCSYNDMNAKVEALNTK 351
Query: 653 TKMLETQISQVAQQVAISSQTPGV--FPGQTETNPK--AHVNAISLGGNKLEETITKAKS 708
+ LE Q + S+ TP V PG++ NPK A +AI++ ++ T
Sbjct: 352 VRYLEGQ--------SASTSTPKVTGLPGKSIQNPKEYATAHAITICHDRELPTRHVPDF 403
Query: 709 VKGEIVKLLGEKNAIKTPLDKN-------KTLNPLRLTKLNLEAQFAK-FLNILKRICIK 760
+ G+ GE + T +K K P L L F K ++ K + K
Sbjct: 404 ITGDSDVQDGEASTQSTSEEKAAIIERMVKRFKPTPLPSSALPWTFRKAWMEKYKSVASK 463
Query: 761 --------IPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ--PQKL 810
+P E L+ +P K +R + ++ + H S K+ +KL
Sbjct: 464 QLDEIEAVMPLIEVLNLIPDPHKDVRNLILERIKMYHDSDDESDATPSRASDKRIVQEKL 523
Query: 811 RDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIP 870
DPGSF +PC IG+ LC LGASVSL+PLS+ +R+ + KP ++ L LADRS
Sbjct: 524 EDPGSFTLPCSIGELAFSDCLCDLGASVSLMPLSVARRLEFIQYKPCDLTLILADRSFRK 583
Query: 871 LAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
G ++D+PV I G+ +PTDFVV+D+E +H P+ILGRP LA+ GA+IDV+ G+I
Sbjct: 584 PFGMLKDLPVMINGVEVPTDFVVLDMEVEHKDPLILGRPLLASVGAVIDVREGKI 638
>At4g08050
Length = 1428
Score = 271 bits (694), Expect = 1e-72
Identities = 205/653 (31%), Positives = 317/653 (48%), Gaps = 73/653 (11%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W +L SIT+
Sbjct: 54 FHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSITT 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFL++F ++TA+LR++I F+QK GES EA ERFK CPHH K +
Sbjct: 114 WDDYKKAFLSKFFSNARTARLRNEIYGFSQKTGESFCEAWERFKGYTNQCPHHSFTKASL 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ +M +D A+ G NK+ E + L+E++AQ+ +Y +R V T
Sbjct: 174 LSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGWELVENLAQSDGNYNEDCDRTV-RGTAD 232
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQLGS 560
+ E+ N ++ QK V+ Q +V G+ + L
Sbjct: 233 SDDKHRKEIKALNDKLDRILLSQQKHVHFLVDDEQ-------YQVQDGEGNQLEEVYLPQ 285
Query: 561 AANIEQLNYAQYNQGMRPNQNFYKNPQGSYGQTAPPGYTNNQ---RVAQKSSLEILLENC 617
+ + YNQG P Q F QG+Y PPG+ Q A + ++ +++
Sbjct: 286 QKQGQNKPFVLYNQGFVPKQQF----QGNYQPPPPPGFVTQQNQCHAAPDAKMKQMVKQL 341
Query: 618 MMNQNKQLQELKNQTGSLNDSL----SKLNTKVDSIATHTKMLETQISQVAQQVAISSQT 673
+ Q E+ + L+ L + LN KV+++ T + LE Q + S+ +
Sbjct: 342 LQGQASSSMEIAKKLSELHHKLDCSYNDLNAKVEALNTKVRYLEGQ--------SASTFS 393
Query: 674 PGV--FPGQTETNPKAHVNAIS--------LGGNKLEETITK---------AKSVKGEIV 714
P V PG++ NPK + A + L + + IT+ + V+ +V
Sbjct: 394 PKVTRLPGKSIQNPKEYATAHAITICHDRELPTRHVLDLITRDNDVQEGEASTQVEASVV 453
Query: 715 KL-------------LGEKNAIKTPLDKNKTLNPLRLTKLN---LEAQFAKFLNI----L 754
+ EK AI + K PL L L +A ++ ++ L
Sbjct: 454 EFNHSAGSRHLTQSTSEEKAAIIERMVKRFKPTPLPLRALPWTFRKAWMERYKSVAAKQL 513
Query: 755 KRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ--PQKLRD 812
I +P E L+ + K +R + ++ + H S K+ +KL D
Sbjct: 514 DEIEAVMPLMEVLNLILDPHKVVRNLILERIKMYHDSDDESDATPSRAADKRIVQEKLED 573
Query: 813 PGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLA 872
PGSF +PC IG+ LC LGASV+L+PLS+ +R+ + KP ++ L LADRS+
Sbjct: 574 PGSFTLPCSIGEFAFSDCLCDLGASVNLMPLSMARRLEFIQYKPCDLTLILADRSSRKHF 633
Query: 873 GYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
G ++D+PV I G+ +PTDFVV+D+E +H P+ILGRPFLA+ GA+IDV+ G+I
Sbjct: 634 GMLKDLPVMINGVEVPTDFVVLDMEVEHKDPLILGRPFLASVGAVIDVKEGKI 686
>At3g32000 unknown protein
Length = 839
Score = 261 bits (667), Expect = 1e-69
Identities = 201/648 (31%), Positives = 310/648 (47%), Gaps = 59/648 (9%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N + +L LFPFSL D+A W +L SIT+
Sbjct: 54 FHGLPMEDPLDHLDEFDRLCNLTKINGVSENGFKLRLFPFSLGDKALIWEMNLPHDSITT 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
DD ++AFL++F +TA+LR++I+ F+QK GES EA ERFK+ CPHHG K +
Sbjct: 114 RDDCKKAFLSKFFSNDRTARLRNEISGFSQKIGESFCEAWERFKDYTNQCPHHGFTKASL 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ +M +D A+ G NK+ E + L++++AQ+ +Y +R V T
Sbjct: 174 LSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGWELVDNLAQSDGNYNEDCDRTVRG-TAD 232
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKIEKLNVN----AAQPSPASPTCEVCGITGHTG--- 553
+ E+ N ++ QK V+ Q + EV I + G
Sbjct: 233 SDDKHRKEIKALNDKLDRILLSQQKHVDFLVDDEQYQVQDGEGNQLEEVSYINNNQGGYK 292
Query: 554 -----------VDCQLGSAANIEQLNY------------AQYNQGMRPNQNFYKNPQGSY 590
+ + + AN + Y YNQG P Q F QG+Y
Sbjct: 293 GYNNFKTNNPNLSYRSTNVANPQDQVYPPQQQQGQNKPFVPYNQGFVPKQQF----QGNY 348
Query: 591 GQTAPPGYTNNQR-------VAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSKLN 643
Q PPG+ Q K ++ LL+ + + ++L L+ S + LN
Sbjct: 349 QQPPPPGFAPQQNQGPATPDAEMKQMVQQLLQGQASSSMEIAKKLSELHHKLDCSYNDLN 408
Query: 644 TKVDSIATHTKMLETQISQVA--QQVAISSQTPGVFPGQTETNPKAHVNAI--SLGGNKL 699
KV+++ T + LE Q + + + + + V G+ T + V S G L
Sbjct: 409 AKVEALNTKVRYLEGQSASTSAPKVTGLPGKDSDVQEGEAFTQVEVSVVEFNHSAGSRHL 468
Query: 700 EETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICI 759
++ ++ K+ I++ + K TPL P K +E + I
Sbjct: 469 IQSTSEEKAA---IIERM-VKRFKPTPLPSRAL--PWTFRKSWMERYKSVAAKQPDEIEA 522
Query: 760 KIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ--PQKLRDPGSFA 817
+P E L+ +P K +R + ++ + H S K+ +KL DPGSF+
Sbjct: 523 VMPLMEVLNLIPDPHKDVRNLILERIKMYHDSDDESDATPSRAADKRIVQEKLEDPGSFS 582
Query: 818 IPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIED 877
+PC IG+ LC LGA VSL+P S+ +R+ + KP ++ L LADRS+ G ++D
Sbjct: 583 LPCSIGEFAFSDCLCDLGAFVSLMPCSVARRLEFIQYKPCDLTLILADRSSRKPFGMLKD 642
Query: 878 IPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
+PV I G+ +PTDFVV+D+E +H P+ILGRPFLA+ GA+IDV+ G+I
Sbjct: 643 LPVMINGVEVPTDFVVLDMEVEHKDPLILGRPFLASVGAVIDVREGKI 690
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 259 bits (663), Expect = 4e-69
Identities = 209/707 (29%), Positives = 331/707 (46%), Gaps = 121/707 (17%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W SL GSITS
Sbjct: 54 FHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSITS 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
W+D ++AFLA+F S+TA+LR+ I+ F Q + E+ YEA ERFK CPHH
Sbjct: 114 WNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWERFKGYQTQCPHH------- 166
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+M +D A+ G +NK+ + + ++E++AQ+ +Y +R++ T + S
Sbjct: 167 ------------EMLLDTASNGNFLNKDVEDGWEVVENLAQSDGNYNEDYDRSIRTSSDS 214
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKI-------EKLNVNAAQPSPASPTCEVCGITG--- 550
E E+ N K+ + QK E L V + V G
Sbjct: 215 D-EKHRREMKAMNDKLDKLLLMQQKHIHFLGDDETLQVQDGETLQLEEVSYVQNQGGYNK 273
Query: 551 --------HTGVDCQLGSAANIEQLNYAQ-----------YNQGMR--PNQNFYKNPQGS 589
H + + + AN + Y YNQG P Q + QG+
Sbjct: 274 GFNNFKQNHPNLSYRSTNVANRQDQVYPSQQQNQPKPFVPYNQGQGYVPKQQY----QGN 329
Query: 590 YGQTAPP-GYTNNQR----VAQKSSLEILLENCMMNQNKQLQELKNQTGSLND----SLS 640
Y Q PP G+T Q+ S L+ +L+ + Q +L + +++ S +
Sbjct: 330 YQQQLPPPGFTQQQQQPALTTPDSDLKNMLQQILQGQATGAMDLSKRMAEIHNKVDCSYN 389
Query: 641 KLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAISL------ 694
+N KV+++ + + +E Q A G++ +N K + +AI+L
Sbjct: 390 DINIKVEALTSKIRYIEGQTGSTAAPKFTGPS------GKSMSNSKEYAHAITLRSGKEL 443
Query: 695 -----------------------GGNKLEETITK------AKSVKGEIVKLLGEKNAIKT 725
GN E+ I + + + L+ + A KT
Sbjct: 444 PTKESPNQNTEDSLDQDGEDFCQNGNSAEKAIEEPILHQPTRPLAPAASPLVEKPAAAKT 503
Query: 726 -------PLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICIKIPFAEALSRMPLYAKFLR 778
P K P R K+ ++ A LK + + +P + L+ +P K+++
Sbjct: 504 KENVFIPPPYKPPLPFPGRFKKVMIQKYKALLEKQLKNLEVTMPLVDCLALIPDSNKYVK 563
Query: 779 EIFSKKKAIDHKETIALTRESSAIVKKQ--PQKLRDPGSFAIPCVIGKETVDKALCHLGA 836
++ +++ + + + L+ E SAI++++ P+KL DPGSF +PC +G K LC LGA
Sbjct: 564 DMITERIK-EVQGMVVLSHECSAIIQQKIIPKKLGDPGSFTLPCALGPLAFSKCLCDLGA 622
Query: 837 SVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDI 896
SVSL+PL + K++G + KP + L LADRS G +ED+PV I + +PTDFVV+++
Sbjct: 623 SVSLMPLPVAKKLGFNKYKPCNISLILADRSVRISHGLLEDLPVMIGVVEVPTDFVVLEM 682
Query: 897 EEDHDVPIILGRPFLATAGAIIDVQSGRIVFQ-ASDAMIGFELENVM 942
+E+ P+ILGRPFLA A AIIDV+ G+I D + F++ N M
Sbjct: 683 DEEPKDPLILGRPFLARARAIIDVKKGKIDLNLGRDLKMTFDITNTM 729
>At2g10670 pseudogene
Length = 929
Score = 255 bits (652), Expect = 7e-68
Identities = 204/695 (29%), Positives = 338/695 (48%), Gaps = 71/695 (10%)
Query: 285 TNIG---WIESWSKRKGLGADLVRKYEDSETKIRLPKVRSL-ARPFSGSPTEDPNLHISS 340
TNIG + + ++R G+ ++R +++ KI+ + + F G P EDP H+
Sbjct: 44 TNIGAGDFPHNHNQRHGI---VLRPVQNNNFKIKSGLIAMVQGNKFHGLPMEDPLDHLDE 100
Query: 341 FLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITSWDDMRRAFLARFSPP 397
RL G K N ++ +L LFPFSL D+A W +L SIT+WDD + AFLA+F
Sbjct: 101 LERLCGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPKNSITTWDDCKMAFLAKFFSN 160
Query: 398 SKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMS 457
S+TA+LR++I+ F K ES EA ERFK CPHHG + +++T Y G+ +M
Sbjct: 161 SRTARLRNEISGFTLKQNESFCEAWERFKGYQTKCPHHGFSQASLLNTLYRGVLPKIRML 220
Query: 458 VDAAAGGALMNKNYTEAYALIEDMAQNHYQWTNERAVTTPTPSKKEAGIYEVSEYNHLAA 517
+D A+ G + K+ E + L+E++AQ+ + + + T S + + E L
Sbjct: 221 LDTASNGNFLKKDIEEGWELVENLAQSGGNYNEDYGRSIYTSSNTDDKHHR--EMKALND 278
Query: 518 KVEALTQKIEKLNVNAAQPSP------ASPTCEVCGITGHTGVDCQLGSAANIEQLNYAQ 571
K++ + Q +K ++ P + C + G +AA +
Sbjct: 279 KLDKIIQMQQKHVHFISEDEPFQVQEGENDQCAEIRYVHNQGPSLPSAAAAAEPTKPFVP 338
Query: 572 YNQ--GMRPNQNFYKNPQGSY-GQTAPPGYTNNQRVA---QKSSLEILLENCMMNQNKQL 625
YNQ G P Q F QG Y Q PPG+T +Q+ A Q S + +L+ + Q
Sbjct: 339 YNQSLGFVPKQQF----QGGYQQQQPPPGFTPHQQQAHAPQNSDIMTVLQQLIQGQATGA 394
Query: 626 QELKNQTGSLNDSLSK----LNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQT 681
E+ + +N+ + + LN+K +S++T + +E ++ + + P PG+
Sbjct: 395 MEIAKKLSKVNNKVDRQGVELNSKFESMSTRMRYVEGILASPS-----VNNNPCQLPGKA 449
Query: 682 ETNPKAH--VNAISLGGNKLEETITKAKSVKGEIVKLLGE---------KNAIKTPLDKN 730
NPK + +AI++ ++ T S + V L GE N I+ P+ +
Sbjct: 450 IQNPKQYSTAHAITITHDRELPTRYVPTSNTEDSVILEGEDFYQDDVLADNPIEEPILTS 509
Query: 731 KTLNPLRLTKLNLEAQFAKFLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAI--D 788
+ P + FAK K I +P +F + + +K +A+
Sbjct: 510 QPTRP----QAPPATPFAKKTEAAKTKDIDFVPPPYKPLLPFPGRFKKVLVAKYRALLEK 565
Query: 789 HKETIALTRESSAIVKKQPQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKR 848
H + I L + A++ + ++L T + LC LGASVSL+PLS+ K+
Sbjct: 566 HIKDIPLV-DCLALIHDEHKQL---------------TFNNCLCDLGASVSLMPLSVVKK 609
Query: 849 MGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGR 908
+G KP ++ L LADR++ G +ED+PV I G+ +PTDFVV++++ + P+ILGR
Sbjct: 610 LGFVHYKPCDLTLILADRTSKTPFGLLEDVPVMINGVEVPTDFVVLEMDGESKDPLILGR 669
Query: 909 PFLATAGAIIDVQSGRIVFQ-ASDAMIGFELENVM 942
PFLA+ GA+IDV+ G+I D + F++ + M
Sbjct: 670 PFLASVGAVIDVKQGKINLNLGEDVKMKFDIRDAM 704
>At4g07640 putative athila transposon protein
Length = 866
Score = 255 bits (651), Expect = 9e-68
Identities = 192/665 (28%), Positives = 317/665 (46%), Gaps = 98/665 (14%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N + +L LFPFSL D+A W +L SI +
Sbjct: 54 FYGLPMEDPLDHLDEFDRLCNLTKINGVSADGFKLRLFPFSLGDKAHIWEKNLPHDSIIT 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFL++F ++TA+LR++I+ F+QK GES EA ERFK CPHHG K +
Sbjct: 114 WDDCKKAFLSKFFSNARTARLRNEISGFSQKTGESFCEAWERFKGYTNQCPHHGFTKASM 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ +M +D A+ G NK+ E + L++++AQ+ +Y +R V S
Sbjct: 174 LSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGWELVDNLAQSDGNYNEDCDRTVRDTADS 233
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKIEKLNVNA--------------AQPSPASPTCEVC 546
+ +++AL K++++ +N Q + EV
Sbjct: 234 DDKH-----------RKEIKALNDKLDRILLNQQKHVHFLVDDEQFQVQDGEGNQLEEVS 282
Query: 547 GI--------------TGHTGVDCQLGSAAN------------IEQLNYAQYNQGMRPNQ 580
I T + + + + AN ++ + YNQG P Q
Sbjct: 283 YINNNQSGYKGYNNFKTNNPNLSYRSTNIANPQDQVYPPQQQQVQNKPFVPYNQGFVPKQ 342
Query: 581 NFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLS 640
F QG+Y PPG + + + + + E+ + L K+Q ++
Sbjct: 343 QF----QGNYQPPPPPG---GKALPTREEPKTVTEDSEDQDGEDLSLEKDQADKPHEQPL 395
Query: 641 KLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAISLGGNKLE 700
+ + + + L+ + V + T +FP + T PK
Sbjct: 396 DQSLEQPLDLSLEQPLDLPLDNVTRPT-----TRPIFPAASATAPKP------------- 437
Query: 701 ETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICIK 760
+ + ++ P K + P R K + A F +K + ++
Sbjct: 438 -------------ITVKNKEKVFVPPPYKPELPFPGRHKKALADKYRAMFAKNIKEVELR 484
Query: 761 IPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ--PQKLRDPGSFAI 818
IP +AL+ +P KFL+++ ++ + + + L+ SAI++K+ P+KL DPGSF +
Sbjct: 485 IPLVDALALIPDSHKFLKDLIVERIQ-EVQGMVVLSHGCSAIIQKKIIPKKLSDPGSFTL 543
Query: 819 PCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDI 878
PC +G ++ LC LGASVSL+ LS+ KR+G + K + + L LADRS G +++
Sbjct: 544 PCSLGPLAFNRCLCDLGASVSLMALSVAKRLGFTQYKSSNISLILADRSVRIPHGLLKNF 603
Query: 879 PVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI-VFQASDAMIGFE 937
+ I + IPTDFVV++++E+ P+ILGRPFLATAGA+IDV+ G+I + D + F+
Sbjct: 604 GITIGAVEIPTDFVVLEMDEEPKDPLILGRPFLATAGAMIDVKKGKIDLSLGKDFRMTFD 663
Query: 938 LENVM 942
+++ M
Sbjct: 664 VKDAM 668
>At3g31340 Athila ORF 1, putative
Length = 781
Score = 237 bits (605), Expect = 2e-62
Identities = 189/626 (30%), Positives = 290/626 (46%), Gaps = 88/626 (14%)
Query: 331 TEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITSWDDMR 387
+E+ H+ +F + + N + ++ LF FSL D A W SL+ ++ SW+D +
Sbjct: 107 SENHVYHLDNFEDICRITRMNGVPDDIIKCRLFIFSLADNAHRWLKSLDPINLRSWEDYK 166
Query: 388 RAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLIVHTFY 447
AFL ++ S+TA LR++I+ F Q ES EA ERFK+ R CPHHG + ++ TFY
Sbjct: 167 AAFLGQYFTQSRTAILRNKISSFQQGGTESFPEAWERFKDYYRECPHHGFSRATLISTFY 226
Query: 448 NGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQNHYQWTNERAVTTPTPSKKEAGIY 507
G+ KM++D A+ G M K TEA LI+++A ++ G
Sbjct: 227 QGVDKAYKMALDTASNGDFMTKTETEATKLIKNLAASNINH------NVDYDRSNRGGGG 280
Query: 508 EVSEYNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQLGSAANIEQL 567
E+ + L+ KVE L ++ +K+ S E G DC A + +
Sbjct: 281 ELKQLAELSVKVEQLLRRDQKVINFCEDSSKGMVHQEYSG-------DCSEDLQAEMNFV 333
Query: 568 NYAQYNQGMRPN--QNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQL 625
N +Y Q + + QNF +P + + S+L+ +LE
Sbjct: 334 NGIRYIQLRQAHKVQNF-----------SPTDFRIKGTIRDNSNLQQILEG--------- 373
Query: 626 QELKNQTGSLN---DSL-SKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQT 681
LK +N DS+ + LN K ++++H K LE Q+SQV V+ S + G G+
Sbjct: 374 --LKKNAADINVKVDSMYNDLNVKFATLSSHVKTLENQVSQV---VSASMRPAGAHSGKE 428
Query: 682 ETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIK--TPLDKNKTLNPLRLT 739
E E + K +V+ L E ++ PL + +L
Sbjct: 429 EPR---------------EIDVAKQVETNAVVVETLVEDKIVEDDEPLSEEPPPYVPKLP 473
Query: 740 KLNLEAQFAKFLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKA--IDHKETIA--- 794
E Q + YA + +K+A D E +A
Sbjct: 474 FPGRERQIQS------------------RKREEYALLVESQRQQKEAQLTDVVEVLAGKE 515
Query: 795 LTRESSAIVKKQ-PQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGE 853
+ SAI P+KL DPGSF +PC IGK ++ LC LGA V+L+PLS+ KR+GI
Sbjct: 516 MVSTCSAIPPATIPEKLGDPGSFVLPCRIGKSAFERCLCDLGAGVNLMPLSMSKRLGITN 575
Query: 854 LKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLAT 913
KP+ + L LADRS G E++ V++ YIPTDFVV++++++ P+ LGRPFL T
Sbjct: 576 FKPSRISLILADRSVRFPVGLAENVHVRVGDFYIPTDFVVLELDKEPHDPLTLGRPFLNT 635
Query: 914 AGAIIDVQSGRIVFQASDAMIGFELE 939
GAIIDV+ I Q D + F+++
Sbjct: 636 VGAIIDVRRSTINLQIGDFALEFDMK 661
>At2g06160 putative Athila retroelement ORF1 protein
Length = 750
Score = 234 bits (597), Expect = 2e-61
Identities = 193/688 (28%), Positives = 314/688 (45%), Gaps = 109/688 (15%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P ED H+ F RL K N ++ + LFPFSL D+ W +L SIT+
Sbjct: 54 FHGLPMEDSLDHLDEFERLCDLTKINGVSEDGFKFRLFPFSLGDKTHLWEKTLPQNSITT 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AF A+F S+TA+LR++I+ F QK ES EA ERFK CPH G ++ +
Sbjct: 114 WDDCKKAFFAKFFSNSRTARLRNEISGFTQKQNESFCEAWERFKGYQTKCPHPGFKQASL 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ +M +D A+ G +NK+ + + L+E++AQ+ +Y +++++T +
Sbjct: 174 LSTLYRGVLPKLRMLLDTASNGNFLNKDVEKGWELVENLAQSDGNYNENYDKSISTSS-- 231
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKIEKL--------------NVNAAQPSPASPTCEVC 546
E + +H +++AL KI+KL V Q E+
Sbjct: 232 -------ESDDKHH--REIKALNDKIDKLLQVQQKHVHFASEHEVFQIQEGENDQCAEIS 282
Query: 547 GITGHTG-------------VDCQLGSAANIEQLNYAQYNQGMRP--------NQNFYKN 585
+ G + + + AN + Y Q Q +P +Q F
Sbjct: 283 YVQNQDGYNKGYNNYRPNPNLSYRSTNVANPQDQVYPQQQQLNQPKPFVSYNQSQGFVPK 342
Query: 586 PQ---GSYGQTAPPGYTNNQRVA---QKSSLEILLENCMMNQNKQLQELKNQTGSLNDSL 639
PQ G Q PPG+T Q A Q+ + +L+ M Q + E + LN +
Sbjct: 343 PQFQGGYQQQQPPPGFTPQQYQASTPQELDIRNMLQKIMQGQGAGVMEAAKKLADLNIKI 402
Query: 640 SKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAISLGGNKL 699
+ K++S++T + L+ + + P G+ NPK + A ++
Sbjct: 403 DRY--KLESLSTRVRYLDGITASPP-----VTNNPCQVSGKAIQNPKEYATAHAIIIRHD 455
Query: 700 EETITKAKSVKGEIVKLLGEKNA--------------------IKTPLDKNKTL------ 733
E T+ S ++ E A ++ L++ T+
Sbjct: 456 RELSTQHVSTSNTEDSVIQEGEASVQIEVSVAEIDYAAQTFYQAQSDLEEKATIIERMVK 515
Query: 734 --NPLRLTKLNLEAQFAK-FLNILKRICIK--------IPFAEALSRMPLYAKFLREIFS 782
P L L F K + +I + + K +P E L + K +R +
Sbjct: 516 RFKPAPSPSLALPWTFRKAWKSIYESLAEKQLDEMESVMPLVEVLKLISDPHKDVRNLIL 575
Query: 783 KKKAI-----DHKETIALTRESSAIVKKQPQKLRDPGSFAIPCVIGKETVDKALCHLGAS 837
++ I D ++ I I++ +KL DPGSF +PC I + T LC LGAS
Sbjct: 576 ERLNIYQDSDDEEDVIMHQAAGERIIQ---EKLEDPGSFTLPCSISQLTFSNCLCDLGAS 632
Query: 838 VSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIE 897
VSL+PLS+ +++ + K ++ L LADR++ +ED+PV I G+ +PTDFVV++++
Sbjct: 633 VSLMPLSVARKLRFVQYKSCDITLILADRTSRRPFSILEDVPVMINGVEVPTDFVVLEMD 692
Query: 898 EDHDVPIILGRPFLATAGAIIDVQSGRI 925
E P+ILGR FLA+ GA+IDV+ G+I
Sbjct: 693 EKSKDPLILGRLFLASVGAVIDVRFGKI 720
>At3g30655 hypothetical protein, 3' partial
Length = 660
Score = 225 bits (574), Expect = 8e-59
Identities = 181/620 (29%), Positives = 296/620 (47%), Gaps = 81/620 (13%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL G K N ++ +L LFPFSL D+A W +L SIT+
Sbjct: 54 FHGLPMEDPLDHLDEFERLYGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPQNSITA 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFLA+F S+TA+LR++I+ F QK ES EA ERFK CPHHG ++ +
Sbjct: 114 WDDCKKAFLAKFFSNSRTARLRNEISGFTQKQNESFGEAWERFKGYQTKCPHHGFKQASL 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ ++ +D A+ G + K+ E + L+E+ AQ+ +Y +R++ T + S
Sbjct: 174 LSTLYRGVLPKIRILLDTASNGNFLKKDVEEGWELVENFAQSDGNYNEDYDRSIRTSSDS 233
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQK----IEKLNVNAAQPSPASPTCEVCGITGHTG--- 553
+ E+ N K+ + QK I + Q E+ + G
Sbjct: 234 NDKHD-REMKALNDKLEKIVQMQQKHVHFISEDEPFPVQEGEKDQWAEISYVQNQGGYNK 292
Query: 554 ----------VDCQLGSAANIEQLNYAQ---------------YNQGMRPNQNFYKNPQG 588
+ + + AN + YAQ NQG P Q F QG
Sbjct: 293 GYNYYRPNPNLSYRSTNVANPQDQVYAQQQQQQNQPKPFVPYNQNQGFIPKQQF----QG 348
Query: 589 SYGQTAP-PGYTNNQRVA---QKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLSK--- 641
Y Q P PG+T Q+ A Q S + I+L+ + Q E+ + +N+ + +
Sbjct: 349 GYQQQQPQPGFTPQQQHAPAPQNSDIMIMLQQLIQGQATGAMEIAKKLCEVNNKIDRQGV 408
Query: 642 -LNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPK--AHVNAISLGGNK 698
LN K +S++T + +E ++ + ++ P PG NPK A V+AI++ ++
Sbjct: 409 ELNNKSESMSTRMRYVEGILASPS-----VNKNPCQLPGNAIQNPKEYATVHAITITHDR 463
Query: 699 LEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKR-- 756
T S + V L GE + + + N T+ LT + Q + + +++
Sbjct: 464 ELPTRYVPTSSTEDSVILHGE-DFYQDDVLANNTIEEPILTSQSTRPQASPATHFVEKPE 522
Query: 757 -------ICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKET--------IALTRESSA 801
+ + P+ L P +F + + +K +A+ K+ +AL +
Sbjct: 523 AAKTKDTVFVPPPYKPPL---PFPGRFKKVLVAKYRALLEKQIKDMPLVAYLALIPDEHN 579
Query: 802 IVKKQ---PQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTE 858
+ +Q P+KL DPGSF +PC I + T LC LGASVS++PLS+ +++G + KP++
Sbjct: 580 AITRQKIVPEKLEDPGSFTLPCSIRQLTFSNCLCDLGASVSIMPLSVARKLGFVQYKPSD 639
Query: 859 MILKLADRSTIPLAGYIEDI 878
+ L LADR++ G +ED+
Sbjct: 640 LTLILADRTSRRPFGLLEDV 659
>At2g07480 F9A16.15
Length = 1012
Score = 187 bits (474), Expect = 3e-47
Identities = 175/588 (29%), Positives = 272/588 (45%), Gaps = 111/588 (18%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ +F RL K N +E+ +L LFPFSL D+A W +L V SI +
Sbjct: 49 FHGLPMEDPLDHLDNFDRLCSLTKINGVSEESFKLRLFPFSLGDKAHLWEKTLPVKSIDT 108
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFLA+F S+ A+LR +I+ FNQK+ ES EA ERFK CPHH E
Sbjct: 109 WDDCKKAFLAKFFSNSRKARLRSEISGFNQKNSESFSEAWERFKGYTTQCPHH--ESLPP 166
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQNHYQWTNERAVTTPTPSKK 502
++ L +M +D A+ G ++NK+ E + L+E++AQ+H + + T S
Sbjct: 167 QYSILRCLP-KIRMLLDTASNGNILNKDVAEGWELVENLAQSHRNYNEDYDRTNRGSSD- 224
Query: 503 EAGIYEVSEYNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQLGSAA 562
SE H +++ L +I+KL V A Q + V IT Q G
Sbjct: 225 -------SEDKH-KKEIKTLNDRIDKL-VLAQQRN-------VYYITEEELTQLQDGENL 268
Query: 563 NIEQLNYAQ----YNQGM------RPNQNFYKN-----------PQGSYGQT-------- 593
IE+++Y Q YN+G PN ++ N PQ Q
Sbjct: 269 TIEEVSYLQNQGGYNKGFNNYKPPHPNLSYRSNNVANPQDQVYPPQNQPTQAKPFVPYNQ 328
Query: 594 --------APPGYTN--NQRVAQKSSLEILLE-------NCMMNQNKQLQELKNQTGSLN 636
PPG+T Q AQ S ++ L + +C M +K+L EL T ++
Sbjct: 329 GYNQKQNFGPPGFTQQPQQPSAQDSEMKTLPQQLVQGHASCSMTMDKKLAEL---TTRID 385
Query: 637 DSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAISLGG 696
S + LN K+D++ T K +E I+ + + + G PG+ NPK + +AIS
Sbjct: 386 CSYNDLNIKIDALNTRVKSMEGHIASTS-----APKHLGQLPGKAVQNPKEYAHAISTVN 440
Query: 697 NKLEE-------TITKAKS---VKGEIVKLLGEK-----NAIKTPLD-KNKTLNPLRLTK 740
E + + +S ++ + L E+ N I P K P R+ +
Sbjct: 441 TSATEDSGIQEGEVLRPRSRQEIELDFFARLVERAHDPSNPIHIPSPYVPKPAFPERIAQ 500
Query: 741 LNLEAQFAK----FLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALT 796
++ E F K F+ +K + K+P + M + ++ + ++ + L+
Sbjct: 501 ID-EMIFQKHKMMFIKCIKELEEKVPLVDTPKEMIM-----------ERPQEAQQIVELS 548
Query: 797 RESSAIVKKQ--PQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLP 842
E SAI++K+ P+KL DPGSF +PC + + +LC LGAS+ P
Sbjct: 549 FECSAIIQKKVIPKKLGDPGSFTLPCSLAPLVFNNSLCDLGASMDEEP 596
>At3g30630 hypothetical protein
Length = 785
Score = 184 bits (468), Expect = 2e-46
Identities = 183/671 (27%), Positives = 290/671 (42%), Gaps = 99/671 (14%)
Query: 295 KRKGLGADLVRKYEDSETKIRLPKVRSL-ARPFSGSPTEDPNLHISSFLRLSGTIKEN-- 351
+RKG+ + +++ KI+ + + F G P ED H+ F RL K N
Sbjct: 25 QRKGIAPPTI---QNNNFKIKSGLISMIQGNKFHGLPMEDLLDHLDEFDRLCNLTKVNGV 81
Query: 352 -QEAVRLHLFPFSLRDRASAWFHSLEVGSITSWDDMRRAFLARFSPPSKTAKLRDQITRF 410
++ +L LFPF L D+A W ++ SI +W D ++AFLA+F +KTA+L ++I+ F
Sbjct: 82 SEDGFKLRLFPFFLGDKAHIWEKNMPHDSIITWVDCKKAFLAKFFSNAKTARLINEISSF 141
Query: 411 NQKDGESLYEA*ERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAAGGALMNKN 470
+QK GES EA ERFK CPHHG +K ++ T Y G+ +M +D A+ NK+
Sbjct: 142 SQKTGESFCEAWERFKGYTNQCPHHGFKKASLLSTLYRGVLPRIRMLLDTASNENFQNKD 201
Query: 471 YTEAYALIEDMAQ--NHYQWTNERAVTTPTPSKKEAGIYEVSEYNHLAAKVEALTQKIEK 528
E + LIE++AQ ++Y ER + T S + E+ N K+ QK
Sbjct: 202 VEEGWELIENLAQSNDNYNKDCERTIRGTTDS-DDKHRKEIKALNDKQDKILLSQQKHVH 260
Query: 529 LNVN----AAQPSPASPTCEVCGITGHTGVDCQLGSAANIEQLNYAQYNQGMRPNQNFYK 584
V+ Q + EV I +G N L+Y N +Q +
Sbjct: 261 FLVDDEQYQVQDGEGNQLEEVSYINNQSGYKGYNNFKTNNPNLSYRSTNIANPQDQVYPP 320
Query: 585 NPQ----GSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDSLS 640
Q G+Y Q PP + Q + + M Q Q + + S++ +
Sbjct: 321 QRQQAISGNYQQQPPPRFAPQQHQGPPA------PDANMKQMAQQLLQEQASSSMDCRYN 374
Query: 641 KLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGV--FPGQTETNPK--AHVNAISLGG 696
LN KV+++ T + LE Q + S+ P V PG+ N K A VNAI++
Sbjct: 375 DLNAKVEALNTKVRYLEGQ--------SASTSAPKVTGLPGKPIQNQKEYATVNAITICH 426
Query: 697 NKLEETITKAKSVKGEIVKL---LGEKNAIKTPLDKN--------KTLNPLRLTKLNLEA 745
++ T + VK +V+ G + I++ ++ K P L L
Sbjct: 427 DRELPT----RHVKVSVVEFNHSAGSHHLIQSTSEEKVAIIERMAKRFKPTPLPSRALPW 482
Query: 746 QFAK-----FLNI----LKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALT 796
+F K + ++ L I + +P E L+ + K +R + ++ + H
Sbjct: 483 KFRKAWMERYKSVAEKQLNEIEVVMPLMEVLNVIHDPHKDVRNLILERIKMYHDSDDECD 542
Query: 797 RESSAIVKKQ--PQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGEL 854
S K+ +KL DPGS +PC IG+ LC LGASVSL+PLS+ + +L
Sbjct: 543 ANPSRAADKRIVQEKLEDPGSCTLPCSIGELAFSNCLCDLGASVSLMPLSVARSGSAYKL 602
Query: 855 KPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATA 914
+ ++E+H +IL RPFLA+
Sbjct: 603 R-------------------------------------CARLKEEHKDHLILERPFLASV 625
Query: 915 GAIIDVQSGRI 925
GA+IDV+ +I
Sbjct: 626 GAVIDVREVKI 636
>At3g31500 hypothetical protein
Length = 591
Score = 162 bits (409), Expect = 1e-39
Identities = 128/509 (25%), Positives = 243/509 (47%), Gaps = 45/509 (8%)
Query: 456 MSVDAAAGGALMNKNYTEAYALIEDMAQNHYQWTNERAVTTPTPSKKEAGIYEVSEYNHL 515
M++D A+ G M K TEA LIE++A ++ + V ++ G E ++ L
Sbjct: 1 MALDTASNGEFMTKTETEATKLIENLAGSN----SNHNVDYDRSNRGGGG--ESKQFAEL 54
Query: 516 AAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQL-----------GSAANI 564
+AKVE L ++ +K +VN + S + G + ++ G + N+
Sbjct: 55 SAKVEQLMRRDQK-SVNFCEDSSKGMVHQEFSGDGSEDLQAEINFVNGYGNYQNGGSTNV 113
Query: 565 EQLNYAQY-----NQGMRPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMM 619
E Y +QG + ++N GQ PP T + + ++++++ +
Sbjct: 114 ENPQDQVYPTQAGSQGQKFQPYGFQNKGNYQGQFQPPAGTGHASSFGDNEMKLMMQQVLE 173
Query: 620 NQNKQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPG 679
+Q K ++ + S+ + L N K ++++H K LE Q+SQ+ V+ S + G G
Sbjct: 174 DQKKNAADINVKVDSMYNDL---NGKFATLSSHVKTLENQVSQI---VSASMRPDGTHSG 227
Query: 680 QTETNPKAHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKN--------AIKTPLDKNK 731
+ + K AI + E + K +V+ L E +++ P K
Sbjct: 228 KVKPKGKEQCYAIMIQEELREIVVAKQVETNVVVVETLVEDKIVEDDEPLSVEPPPYVPK 287
Query: 732 TLNPLRLTKLNLEAQFAKFLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHK- 790
P R ++ + ++A+F I+K++ +++PF + + +P Y +L+ I S K++I+
Sbjct: 288 LPFPGRERQIQRQKEYARFDEIMKQLYVRLPFLQLVLHVPSYRSYLKYILSNKRSIEEGV 347
Query: 791 ETIALTRESSAIVKKQPQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMG 850
+ I+ E + +V+ Q Q+ + + + GKE V+ ++ P ++ K++G
Sbjct: 348 KLISKGEEHAQLVESQRQQKEAQLTNVVEMLAGKEMVNTCS-------AIPPATIPKKLG 400
Query: 851 IGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPF 910
I KP+ + L LADRS G E++ ++ YIPT+FVV++++++ P+ LGRPF
Sbjct: 401 ITNFKPSRISLILADRSVQFPMGLAENVHARVGNFYIPTNFVVLELDKEPHDPLNLGRPF 460
Query: 911 LATAGAIIDVQSGRIVFQASDAMIGFELE 939
L T AIIDV+ I Q D + F+++
Sbjct: 461 LNTVEAIIDVRRSTINLQIGDYALEFDIK 489
>At4g03790 putative athila-like protein
Length = 1064
Score = 147 bits (372), Expect = 2e-35
Identities = 115/392 (29%), Positives = 187/392 (47%), Gaps = 57/392 (14%)
Query: 582 FYKNPQGSYGQTAPPGYT---NNQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLNDS 638
FY+ G+Y P G+ N A + ++ +++ + Q E+ + L+
Sbjct: 141 FYRR-LGNYQPQPPHGFAPQENQGPTAPDAEMKQMVQQLLQGQASSSMEIPKKLSELHHK 199
Query: 639 L----SKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGV--FPGQTETNPKAHVNA- 691
L + LN KV+++ T + LE Q + S+ P V PG++ NPK + A
Sbjct: 200 LDCNYNDLNAKVEALNTKVRYLEGQ--------SASTSVPKVTGLPGKSIQNPKEYATAH 251
Query: 692 -----------------ISLGGNKLEE--TITKAKSVKGEIVKLLGEKNAIKTPLDKN-- 730
+ +G + ++E T+ + E G + I++ ++
Sbjct: 252 AITICHDRELPTRPVLDLIIGESDVQEGEACTQIEVSVIEFNHSAGSHHLIQSTSEEKAA 311
Query: 731 ------KTLNPLRLTKLNLEAQFAK-FLNILKRICIK--------IPFAEALSRMPLYAK 775
K P L L F K ++ K + K +P E L+ +P + K
Sbjct: 312 IIERMVKRFKPTPLPSRALPWTFRKAWIERYKSVAAKQLDEIEAVMPLMEVLNLIPDHHK 371
Query: 776 FLREIFSKKKAIDHKETIALTRESSAIVKKQ--PQKLRDPGSFAIPCVIGKETVDKALCH 833
+R + +K + H S +V K+ +KL DPGSF +PC IG+ LC
Sbjct: 372 DVRNLILEKIKMYHDSDDESDATPSRVVDKRIVQEKLEDPGSFTLPCSIGELAFSDFLCD 431
Query: 834 LGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTDFVV 893
LGASVSL+PLS+ +R+ KP ++ L LADRS+ G ++D+PV I G+ +PTDFVV
Sbjct: 432 LGASVSLMPLSMGRRLEFIHYKPCDLTLILADRSSRKPFGMLKDLPVMINGVEVPTDFVV 491
Query: 894 VDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
+++E H P+ILGRPFLA+ GA+ID++ G+I
Sbjct: 492 LNMEVKHKDPLILGRPFLASVGAVIDIREGKI 523
Score = 55.8 bits (133), Expect = 1e-07
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W +L SIT+
Sbjct: 54 FHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSITT 113
Query: 383 WDDMRRAFLARFSP 396
W RR F SP
Sbjct: 114 WMIARRLFYQSSSP 127
>At2g10620 putative Athila retroelement ORF1 protein
Length = 451
Score = 142 bits (359), Expect = 7e-34
Identities = 122/439 (27%), Positives = 202/439 (45%), Gaps = 56/439 (12%)
Query: 512 YNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVD----CQLGSAANIEQL 567
YN L KVE L+ K++ L N+A S T ++ G + L S + +
Sbjct: 34 YNDLNVKVETLSTKVQYLEGNSASTSAQKQTSQLPGKAIQNPKEYAHAITLRSGKALPTI 93
Query: 568 NYAQ-YNQGMRPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQLQ 626
+ G RP++ KN +G G+ T + + ++ I+ E+ + + +
Sbjct: 94 EAPKTVTVGKRPSRKTSKNDRGRTGRERNSKGTKAKEMGKRFGGVIVTEDSVDHDGEDFS 153
Query: 627 ELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPK 686
K+Q K LE + Q +Q + T FP
Sbjct: 154 LTKDQAD--------------------KELEQPLDQSLEQ-PLDHFTRPPFP-------- 184
Query: 687 AHVNAISLGGNKLEETITKAKSVKGEIVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQ 746
IT +VK +VK ++ P K P R K
Sbjct: 185 ----------------ITAPTAVKPVVVK--NKEKVFVPPPYKPHPSFPGRHKKALAHKY 226
Query: 747 FAKFLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ 806
F +K + ++IP +AL+ + KFL+++ ++ + + + L+ E SAI++K+
Sbjct: 227 RVMFAKNIKEVELQIPLVDALALIMDSHKFLKDLIVERIQ-ELQGMVVLSDECSAIIQKK 285
Query: 807 --PQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLA 864
+KL DPGSF +PC +G +K LC LGAS SL+PLS+ KR+G + K + L LA
Sbjct: 286 IIHKKLSDPGSFTLPCSLGPLAFNKCLCDLGASASLMPLSVTKRLGFTQYKSCNISLILA 345
Query: 865 DRSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGR 924
DRS ++E+IP++I + IPTDFVV++++E+ +ILGRPFL T GA+I ++ G+
Sbjct: 346 DRSVRIPHDFLENIPIRIRAVEIPTDFVVLEMDEEPKDHLILGRPFLTTVGAMIYIKKGK 405
Query: 925 IVFQ-ASDAMIGFELENVM 942
I D + F++++ M
Sbjct: 406 INLNLGKDFRMTFDVKDTM 424
Score = 40.0 bits (92), Expect = 0.006
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 623 KQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTE 682
K++ EL N+ L+ S + LN KV++++T + LE + + Q S PG+
Sbjct: 21 KKIFELHNK---LDYSYNDLNVKVETLSTKVQYLEGNSASTSAQKQTSQ-----LPGKAI 72
Query: 683 TNPKAHVNAISLGGNKLEETITKAKSV 709
NPK + +AI+L K TI K+V
Sbjct: 73 QNPKEYAHAITLRSGKALPTIEAPKTV 99
>At1g37070 hypothetical protein
Length = 590
Score = 142 bits (359), Expect = 7e-34
Identities = 131/489 (26%), Positives = 209/489 (41%), Gaps = 113/489 (23%)
Query: 456 MSVDAAAGGALMNKNYTEAYALIEDMAQNH--YQWTNERAVTTPTPSKKEAGIYEVSEYN 513
M +D A+ G +NK+ E + L+E++AQ+ Y +R V S+ +
Sbjct: 1 MLLDTASNGNFLNKDVAEGWKLVENLAQSDGCYNEYYDRLVRGTGGSEDKK--------- 51
Query: 514 HLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQLGSAANIEQLNYAQYN 573
+ ++AL +K++KL + A +Q++Y
Sbjct: 52 --SKDIKALNEKLDKLLL------------------------------AQQKQIHYIT-- 77
Query: 574 QGMRPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQLQELKNQTG 633
++ ++ +G QT Y N+ EL N+ G
Sbjct: 78 -----DEEHFQMQEGGNDQTVELCYIQNKGA----------------------ELHNKIG 110
Query: 634 SLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTETNPKAHVNAIS 693
S + LN K +++ + K +E+Q + + + + P PG+ NPK + +
Sbjct: 111 C---SYNDLNVKFEALNSKIKYVESQFASTS-----ALEHPQQLPGKAVQNPKDYATGNA 162
Query: 694 LGGNKLEETITKAKSVKGE---IVKLLGEKNAIKTPLDKNKTLNPLRLTKLNLEAQFAKF 750
+ ++ +E+ ++ E I + G+ I P + LN KF
Sbjct: 163 ITIHQEDESPPSRQTPHTEENMIQEGGGDSTQIAAPATQQFIWTIKHTPLLNTHHPGKKF 222
Query: 751 LNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQPQ-K 809
K K ++E I+ KK Q K
Sbjct: 223 K-----------------------------IEKLKKDQNQEMISSASTQETYKKKIIQEK 253
Query: 810 LRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTI 869
L DPGSF +PC +G T ++ LC LGASVSL+PLS KR+GI E K + L LAD S
Sbjct: 254 LDDPGSFTLPCSLGPLTFNRCLCDLGASVSLMPLSTAKRLGIMEYKFCNLALLLADGSVA 313
Query: 870 PLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRIVFQA 929
G IE++PVKIE + IPTDFVV+D++E P+ILGRPFLA+AGA+IDV++G+I
Sbjct: 314 HPHGLIENLPVKIENVEIPTDFVVLDVDEKGKDPLILGRPFLASAGAVIDVRNGKINLNL 373
Query: 930 SDAMIGFEL 938
+ F++
Sbjct: 374 EGIKMKFDI 382
>At1g38440 hypothetical protein
Length = 263
Score = 141 bits (356), Expect = 2e-33
Identities = 92/275 (33%), Positives = 140/275 (50%), Gaps = 26/275 (9%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W +L SIT+
Sbjct: 7 FHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSITT 66
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFL++F ++TA+LR++I+ F+QK ES EA ERFK CPHHG K +
Sbjct: 67 WDDCKKAFLSKFFSNARTARLRNEISGFSQKTSESFCEAWERFKGYTNQCPHHGFTKASL 126
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQNH--YQWTNERAVTTPTPS 500
+ T Y G+ M +DAA+ G NK+ E + L+E++AQ++ Y +R V S
Sbjct: 127 LSTLYRGVLPCIIMLLDAASNGNFQNKDVEEGWELVENLAQSYGNYNEDCDRTVRGTADS 186
Query: 501 KKEAGIYEVSEYNHLAAKVEALTQKIEKLNVNAAQPSPASPTCEVCGITGHTGVDCQLGS 560
+ +++AL K++++ ++ + V + Q G
Sbjct: 187 NDKH-----------RKEIKALNDKLDRIFLSQQK--------HVHFLVDDKQFQVQDGE 227
Query: 561 AANIEQLNYAQYNQGMRPNQNFYK--NPQGSYGQT 593
+E+++Y NQG N +K NP SY T
Sbjct: 228 GNQLEEVSYINNNQGGYKGYNNFKTNNPNLSYRST 262
>At1g41690 hypothetical protein
Length = 371
Score = 137 bits (345), Expect = 3e-32
Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Query: 326 FSGSPTEDPNLHISSFLRLSGTIKEN---QEAVRLHLFPFSLRDRASAWFHSLEVGSITS 382
F G P EDP H+ F RL K N ++ +L LFPFSL D+A W +L GSIT+
Sbjct: 54 FHGLPMEDPLDHLDEFERLCSLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPQGSITT 113
Query: 383 WDDMRRAFLARFSPPSKTAKLRDQITRFNQKDGESLYEA*ERFKEMLRLCPHHGLEKWLI 442
WDD ++AFLA+F S+TA+LR++I+ F QK ES EA ERFK CPHHG ++ +
Sbjct: 114 WDDCKKAFLAKFFSYSRTARLRNEISGFTQKQSESFCEAWERFKGYQTKCPHHGFKQASL 173
Query: 443 VHTFYNGLSYTTKMSVDAAAGGALMNKNYTEAYALIEDMAQN--HYQWTNERAVTTPTPS 500
+ T Y G+ +M +D A+ G + K+ E + L+E AQ+ +Y +R++ T + S
Sbjct: 174 LSTLYRGVLPKIRMLLDTASNGNFLKKDVEEGWELVEKFAQSDGNYNEDYDRSIRTSSDS 233
>At1g36560 hypothetical protein
Length = 524
Score = 137 bits (345), Expect = 3e-32
Identities = 80/198 (40%), Positives = 121/198 (60%), Gaps = 6/198 (3%)
Query: 748 AKFLNILKRICIKIPFAEALSRMPLYAKFLREIFSK--KKAIDHKETIALTRESSAIVKK 805
AK LN ++ + +P E L+ +P K +R + + K D + T +A +
Sbjct: 58 AKQLNEIEAV---MPLMEVLNLIPNPHKDVRNLILEWIKMYHDSDDESDATPSRAADKRI 114
Query: 806 QPQKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLAD 865
+KL DPGSF +PC +G T +K LC LGASVSL+PLS+ KR+G + K + L LAD
Sbjct: 115 VQEKLEDPGSFTLPCSLGSLTFNKCLCDLGASVSLMPLSVAKRLGFNKYKYCNISLILAD 174
Query: 866 RSTIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
S G +ED+P+KI + +PTDF++++++E+ P+ILGRPFLATAGAIIDV+ G+I
Sbjct: 175 GSVRQPHGVLEDLPIKIGKVEVPTDFIILNMDEEPKDPLILGRPFLATAGAIIDVKQGKI 234
Query: 926 -VFQASDAMIGFELENVM 942
+ D + F++ + M
Sbjct: 235 DLNMGKDFKMKFDINDAM 252
>At4g07370
Length = 531
Score = 136 bits (343), Expect = 5e-32
Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 62/335 (18%)
Query: 623 KQLQELKNQTGSLNDSLSKLNTKVDSIATHTKMLETQISQVAQQVAISSQTPGVFPGQTE 682
K++ EL + L+ S + LN KV+++ + + LE + + SS PG++
Sbjct: 22 KKISELHQK---LDCSYNDLNAKVEALNSKVRYLE------GESASTSSPKVTGLPGKSI 72
Query: 683 TNPK-----------AHVNAISLGGNKLEETITKAKSVKGEIV----------------K 715
NPK A+ + N E+ + K V I+ K
Sbjct: 73 QNPKEERPKSVTEDSAYQDGEDFSLN--EDQVDKPTEVLEPILDRDTRPTNPLTSSAALK 130
Query: 716 LLGEKN---AIKTPLDKNKTLNPLRLTKLNLEAQFAKFLNILKRICIKIPFAEALSRMPL 772
L+ KN A P K P R K + A F +K++ ++IP A+AL+ +P
Sbjct: 131 LVAAKNNEIAFIPPPYKPPLPFPGRHKKEVEDKYRAMFAKNIKKVELRIPLADALTHIPD 190
Query: 773 YAKFLREIFSKKKAIDHKETIALTRESSAIVKKQP--QKLRDPGSFAIPCVIGKETVDKA 830
KFL+++ ++ K T+ L+ E SAI+++ +KL DPGSF +PC +G T +K
Sbjct: 191 SQKFLKDLIMERIQEVQKTTV-LSHECSAIIQENDVSEKLGDPGSFTLPCSLGSLTFNKC 249
Query: 831 LCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLAGYIEDIPVKIEGIYIPTD 890
LC LG SV+L+PLS+ KR ++L G +ED+P+KI + +PTD
Sbjct: 250 LCDLGPSVNLMPLSVAKRS-----------VRLPH-------GLLEDLPIKIRNVEVPTD 291
Query: 891 FVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRI 925
FVV++++E+ P+ILGRPFLAT G IIDV+ G+I
Sbjct: 292 FVVLNMDEEPKDPLILGRPFLATVGVIIDVKQGKI 326
>At4g07600
Length = 630
Score = 136 bits (342), Expect = 6e-32
Identities = 75/196 (38%), Positives = 125/196 (63%), Gaps = 4/196 (2%)
Query: 750 FLNILKRICIKIPFAEALSRMPLYAKFLREIFSKKKAIDHKETIALTRESSAIVKKQ--P 807
F +K + ++IP +AL+ + KFL+++ ++ + + + L+ E SAI++K+ P
Sbjct: 2 FAKNIKEVELRIPLVDALALILDTHKFLKDLIVERIQ-EVQGMVVLSHECSAIIQKKIVP 60
Query: 808 QKLRDPGSFAIPCVIGKETVDKALCHLGASVSLLPLSLFKRMGIGELKPTEMILKLADRS 867
+KL DPGSF +PC +G ++ LC LGA VS +PLS+ KR+G + K + L LADRS
Sbjct: 61 KKLSDPGSFTLPCFLGTVAFNRCLCDLGALVSPMPLSIAKRLGFTQYKSCNISLILADRS 120
Query: 868 TIPLAGYIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLATAGAIIDVQSGRIVF 927
G ++++P++I I TDFV+++++E+ P+IL RPFLATAGA+IDV+ G+I
Sbjct: 121 VRISHGLLKNLPIRIGAAEISTDFVILEMDEEPKDPLILRRPFLATAGAMIDVKKGKIDL 180
Query: 928 Q-ASDAMIGFELENVM 942
D + F++++ M
Sbjct: 181 NLGKDFRMTFDIKDAM 196
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.332 0.142 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,774,036
Number of Sequences: 26719
Number of extensions: 753085
Number of successful extensions: 2935
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2696
Number of HSP's gapped (non-prelim): 189
length of query: 942
length of database: 11,318,596
effective HSP length: 109
effective length of query: 833
effective length of database: 8,406,225
effective search space: 7002385425
effective search space used: 7002385425
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 65 (29.6 bits)
Medicago: description of AC144538.1