Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144503.4 - phase: 0 
         (366 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g51660 unknown protein                                             509  e-144
At3g21220 MAP kinase kinase 5                                         474  e-134
At1g73500 unknown protein                                             284  6e-77
At1g18350 MAP kinase kinase 5, putative                               276  1e-74
At3g06230 putative MAP kinase                                         209  1e-54
At1g32320 MAP kinase, putative                                        204  8e-53
At4g29810 MAP kinase kinase 2                                         202  3e-52
At5g56580 protein kinase MEK1 homolog                                 199  2e-51
At4g26070 MEK1                                                        199  2e-51
At5g40440 MAP kinase kinase 3 (ATMKK3)                                169  2e-42
At1g69220 serine/threonine kinase (SIK1)                              142  3e-34
At5g66850 MAP protein kinase like protein                             137  1e-32
At3g15220 putative MAP kinase                                         136  2e-32
At1g63700 putative protein kinase                                     135  3e-32
At1g53570 MEK kinase MAP3Ka, putative                                 134  8e-32
At1g09000 NPK1-related protein kinase 1S (ANP1)                       131  5e-31
At2g45490 putative protein kinase                                     129  3e-30
At4g08500 MEKK1/MAP kinase kinase kinase                              128  6e-30
At1g50230 hypothetical protein                                        126  2e-29
At3g06030 NPK1-related protein kinase 3                               126  2e-29

>At1g51660 unknown protein
          Length = 366

 Score =  509 bits (1310), Expect = e-144
 Identities = 260/374 (69%), Positives = 293/374 (77%), Gaps = 20/374 (5%)

Query: 1   MRPIQLPPPTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSG 60
           MRPIQ PP  S              SRP  RRR  LTLPLPQRD +LAVPLPLPP+ G  
Sbjct: 1   MRPIQSPPGVSVPV----------KSRP--RRRPDLTLPLPQRDVSLAVPLPLPPTSGGS 48

Query: 61  GGGNGSGSGSGGASQQL-------VIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALK 113
           GG +GS   SGG++             +S+L R NRIGSG+GGTVYKV+HR + R YALK
Sbjct: 49  GGSSGSAPSSGGSASSTNTNSSIEAKNYSDLVRGNRIGSGAGGTVYKVIHRPSSRLYALK 108

Query: 114 VIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIP 173
           VIYG+HEE+VRRQI REI+ILRDV+  NVVKCHEM+D N EIQVLLE+MD GSLEG H+ 
Sbjct: 109 VIYGNHEETVRRQICREIEILRDVNHPNVVKCHEMFDQNGEIQVLLEFMDKGSLEGAHVW 168

Query: 174 QENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPC 233
           +E QLAD++RQIL GLAYLH RHIVHRDIKPSNLLINS K VKIADFGV RIL QTMDPC
Sbjct: 169 KEQQLADLSRQILSGLAYLHSRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC 228

Query: 234 NSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLM 293
           NSSVGTIAYMSPERINTD+N G+YD YAGDIWSLGVSILEFY+GRFPF V RQGDWASLM
Sbjct: 229 NSSVGTIAYMSPERINTDLNQGKYDGYAGDIWSLGVSILEFYLGRFPFPVSRQGDWASLM 288

Query: 294 CAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQSPPNM 353
           CAICMSQPPEAP TASPEFR F+S CLQR+P +R +A +LL HPF++R   + N+SP N+
Sbjct: 289 CAICMSQPPEAPATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNL 348

Query: 354 HQLLPPP-PRSQSS 366
           HQLLPPP P S SS
Sbjct: 349 HQLLPPPRPLSSSS 362


>At3g21220 MAP kinase kinase 5
          Length = 348

 Score =  474 bits (1221), Expect = e-134
 Identities = 243/360 (67%), Positives = 276/360 (76%), Gaps = 19/360 (5%)

Query: 1   MRPIQLPPPTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSG 60
           M+PIQ P        +   SP  N    + R+R  L+LPLP RD  LAVPLPLPP   S 
Sbjct: 1   MKPIQSP--------SGVASPMKN----RLRKRPDLSLPLPHRDVALAVPLPLPPPSSSS 48

Query: 61  GGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHE 120
                S + S   S    +  SELER+NRIGSG+GGTVYKV+H    R +ALKVIYG+HE
Sbjct: 49  SAPASSSAISTNISAAKSL--SELERVNRIGSGAGGTVYKVIHTPTSRPFALKVIYGNHE 106

Query: 121 ESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLAD 180
           ++VRRQI REI+ILR VD  NVVKCH+M+DHN EIQVLLE+MD GSLEG HI QE +LAD
Sbjct: 107 DTVRRQICREIEILRSVDHPNVVKCHDMFDHNGEIQVLLEFMDQGSLEGAHIWQEQELAD 166

Query: 181 VARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTI 240
           ++RQIL GLAYLHRRHIVHRDIKPSNLLINS K VKIADFGV RIL QTMDPCNSSVGTI
Sbjct: 167 LSRQILSGLAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTI 226

Query: 241 AYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQ 300
           AYMSPERINTD+N G+YD YAGD+WSLGVSILEFY+GRFPFAV RQGDWASLMCAICMSQ
Sbjct: 227 AYMSPERINTDLNHGRYDGYAGDVWSLGVSILEFYLGRFPFAVSRQGDWASLMCAICMSQ 286

Query: 301 PPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQSPPNMHQLLPPP 360
           PPEAP TAS EFR FVS CLQ DP +RW+A +LL HPF+++         PN+ Q+LPPP
Sbjct: 287 PPEAPATASQEFRHFVSCCLQSDPPKRWSAQQLLQHPFILKATGG-----PNLRQMLPPP 341


>At1g73500 unknown protein
          Length = 310

 Score =  284 bits (726), Expect = 6e-77
 Identities = 147/306 (48%), Positives = 201/306 (65%), Gaps = 4/306 (1%)

Query: 38  LPLPQRDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGT 97
           + L +    L + LPLPP        + S + +   +    I   +LE+LN +G G+GG 
Sbjct: 1   MALVRERRQLNLRLPLPPISDRRFSTSSSSATTTTVAGCNGISACDLEKLNVLGCGNGGI 60

Query: 98  VYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNA--EI 155
           VYKV H+     YALK + G  +    RQ+ RE++ILR  D   VVKCH +++     E+
Sbjct: 61  VYKVRHKTTSEIYALKTVNGDMDPIFTRQLMREMEILRRTDSPYVVKCHGIFEKPVVGEV 120

Query: 156 QVLLEYMDGGSLEG-KHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQ 214
            +L+EYMDGG+LE  +    E +LA  A+QIL+GL+YLH   IVHRDIKP+NLL+NS+ +
Sbjct: 121 SILMEYMDGGTLESLRGGVTEQKLAGFAKQILKGLSYLHALKIVHRDIKPANLLLNSKNE 180

Query: 215 VKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEF 274
           VKIADFGV +IL +++D CNS VGT AYMSPER +++ + G  D YAGDIWS G+ +LE 
Sbjct: 181 VKIADFGVSKILVRSLDSCNSYVGTCAYMSPERFDSESSGGSSDIYAGDIWSFGLMMLEL 240

Query: 275 YMGRFP-FAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRL 333
            +G FP    G++ DWA+LMCA+C  +PP AP   S EFR FV  CL++D S+RWTA +L
Sbjct: 241 LVGHFPLLPPGQRPDWATLMCAVCFGEPPRAPEGCSEEFRSFVECCLRKDSSKRWTAPQL 300

Query: 334 LSHPFL 339
           L+HPFL
Sbjct: 301 LAHPFL 306


>At1g18350 MAP kinase kinase 5, putative
          Length = 307

 Score =  276 bits (706), Expect = 1e-74
 Identities = 150/315 (47%), Positives = 202/315 (63%), Gaps = 20/315 (6%)

Query: 29  QRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLN 88
           ++RR+ +L LP+P     L+V LP      S      +G           I  S++E+L+
Sbjct: 5   RKRRQINLRLPVPP----LSVHLPWFSFASSTAPVINNG-----------ISASDVEKLH 49

Query: 89  RIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEM 148
            +G GS G VYKV H+  G  YALK + G    +  RQ+ RE++ILR  D   VV+C  +
Sbjct: 50  VLGRGSSGIVYKVHHKTTGEIYALKSVNGDMSPAFTRQLAREMEILRRTDSPYVVRCQGI 109

Query: 149 YDHN--AEIQVLLEYMDGGSLEG-KHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPS 205
           ++     E+ +L+EYMDGG+LE  +    E QLA  +RQIL+GL+YLH   IVHRDIKP+
Sbjct: 110 FEKPIVGEVSILMEYMDGGNLESLRGAVTEKQLAGFSRQILKGLSYLHSLKIVHRDIKPA 169

Query: 206 NLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIW 265
           NLL+NSR +VKIADFGV +I+ +++D CNS VGT AYMSPER ++   +   D YAGDIW
Sbjct: 170 NLLLNSRNEVKIADFGVSKIITRSLDYCNSYVGTCAYMSPERFDSAAGENS-DVYAGDIW 228

Query: 266 SLGVSILEFYMGRFP-FAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDP 324
           S GV ILE ++G FP    G++ DWA+LMC +C  +PP AP   S EFR FV  CL+++ 
Sbjct: 229 SFGVMILELFVGHFPLLPQGQRPDWATLMCVVCFGEPPRAPEGCSDEFRSFVDCCLRKES 288

Query: 325 SRRWTASRLLSHPFL 339
           S RWTAS+LL HPFL
Sbjct: 289 SERWTASQLLGHPFL 303


>At3g06230 putative MAP kinase
          Length = 293

 Score =  209 bits (533), Expect = 1e-54
 Identities = 108/251 (43%), Positives = 168/251 (66%), Gaps = 13/251 (5%)

Query: 82  SELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVN 141
           + L+R++ +GSG+GGTV+KV  +     YALK +    +E+      REI+ILR V+   
Sbjct: 51  ANLDRISVLGSGNGGTVFKVKDKTTSEIYALKKV----KENWDSTSLREIEILRMVNSPY 106

Query: 142 VVKCHEMYDH-NAEIQVLLEYMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHR 200
           V KCH+++ + + E+ +L++YMD GSLE      E QLA ++RQ+L G  YLH   IVHR
Sbjct: 107 VAKCHDIFQNPSGEVSILMDYMDLGSLESLRGVTEKQLALMSRQVLEGKNYLHEHKIVHR 166

Query: 201 DIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDIN----DGQ 256
           DIKP+NLL +S+++VKIADFGV +I+ ++++ CNS VGT AYMSPER++++ +    + +
Sbjct: 167 DIKPANLLRSSKEEVKIADFGVSKIVVRSLNKCNSFVGTFAYMSPERLDSEADGVTEEDK 226

Query: 257 YDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFV 316
            + YAGDIWS G+++LE  +G +P       D A+++CA+C  +PP+AP   S + + F+
Sbjct: 227 SNVYAGDIWSFGLTMLEILVGYYPML----PDQAAIVCAVCFGEPPKAPEECSDDLKSFM 282

Query: 317 SRCLQRDPSRR 327
             CL++  S R
Sbjct: 283 DCCLRKKASER 293


>At1g32320 MAP kinase, putative
          Length = 305

 Score =  204 bits (518), Expect = 8e-53
 Identities = 119/295 (40%), Positives = 173/295 (58%), Gaps = 13/295 (4%)

Query: 51  LPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAY 110
           L +PP    G   + + S S       +   ++LE+L+ +G GSGGTVYK  HR     Y
Sbjct: 15  LSIPPLIYHGTAFSVASSSSSSPETSPIQTLNDLEKLSVLGQGSGGTVYKTRHRRTKTLY 74

Query: 111 ALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGK 170
           ALKV+      ++   +  E  IL+ ++   ++KC+ ++    ++  ++E M+ GSL   
Sbjct: 75  ALKVL----RPNLNTTVTVEADILKRIESSFIIKCYAVFVSLYDLCFVMELMEKGSLHDA 130

Query: 171 HIPQ----ENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRIL 226
            + Q    E  ++ +A +IL+GL YL +  IVH DIKPSNLLIN + +VKIADFG  RI+
Sbjct: 131 LLAQQVFSEPMVSSLANRILQGLRYLQKMGIVHGDIKPSNLLINKKGEVKIADFGASRIV 190

Query: 227 NQTMDPCNSSVGTIAYMSPERINTD-INDGQYDAYAGDIWSLGVSILEFYMGRFPFA-VG 284
                    S GT AYMSPER++ +    G    +AGD+WSLGV +LE Y+GR+P   VG
Sbjct: 191 ---AGGDYGSNGTCAYMSPERVDLEKWGFGGEVGFAGDVWSLGVVVLECYIGRYPLTKVG 247

Query: 285 RQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFL 339
            + DWA+L CAIC ++  + P + S EFRDFV RCL++D  +R T   LL H F+
Sbjct: 248 DKPDWATLFCAICCNEKVDIPVSCSLEFRDFVGRCLEKDWRKRDTVEELLRHSFV 302


>At4g29810 MAP kinase kinase 2
          Length = 363

 Score =  202 bits (513), Expect = 3e-52
 Identities = 120/272 (44%), Positives = 165/272 (60%), Gaps = 17/272 (6%)

Query: 79  IPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVD 138
           +  S+L+ +  IG GS G V  V H+  G+ +ALKVI  + +E++R+ I +E++I +   
Sbjct: 65  LSLSDLDMVKVIGKGSSGVVQLVQHKWTGQFFALKVIQLNIDEAIRKAIAQELKINQSSQ 124

Query: 139 DVNVVKCHEMYDHNAEIQVLLEYMDGGSLEG-----KHIPQENQLADVARQILRGLAYLH 193
             N+V  ++ +  N  I ++LEYMDGGSL       K IP ++ L+ + RQ+L+GL YLH
Sbjct: 125 CPNLVTSYQSFYDNGAISLILEYMDGGSLADFLKSVKAIP-DSYLSAIFRQVLQGLIYLH 183

Query: 194 R-RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDI 252
             RHI+HRD+KPSNLLIN R +VKI DFGV  ++  T    N+ VGT  YMSPERI    
Sbjct: 184 HDRHIIHRDLKPSNLLINHRGEVKITDFGVSTVMTNTAGLANTFVGTYNYMSPERI---- 239

Query: 253 NDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGD-WAS---LMCAICMSQPPEAPT-T 307
             G       DIWSLG+ +LE   G+FP+A   Q + W S   LM AI    PP  P+  
Sbjct: 240 -VGNKYGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAIVDQPPPALPSGN 298

Query: 308 ASPEFRDFVSRCLQRDPSRRWTASRLLSHPFL 339
            SPE   F+S CLQ+DP+ R +A  L+ HPFL
Sbjct: 299 FSPELSSFISTCLQKDPNSRSSAKELMEHPFL 330


>At5g56580 protein kinase MEK1 homolog
          Length = 356

 Score =  199 bits (507), Expect = 2e-51
 Identities = 121/273 (44%), Positives = 167/273 (60%), Gaps = 18/273 (6%)

Query: 79  IPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVD 138
           I   +LE +  IG GSGG V  V H+  G+ +A+KVI  + +E +R+QI +E++I +   
Sbjct: 65  ITAEDLETVKVIGKGSGGVVQLVRHKWVGKFFAMKVIQMNIQEEIRKQIVQELKINQASS 124

Query: 139 DV-NVVKCHEMYDHNAEIQVLLEYMDGGSL-----EGKHIPQENQLADVARQILRGLAYL 192
              +VV C+  + HN    ++LEYMD GSL     + K I  E  LA V +Q+L GL YL
Sbjct: 125 QCPHVVVCYHSFYHNGAFSLVLEYMDRGSLADVIRQVKTI-LEPYLAVVCKQVLLGLVYL 183

Query: 193 HR-RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTD 251
           H  RH++HRDIKPSNLL+N + +VKI+DFGV   L  +M   ++ VGT  YMSPERI+  
Sbjct: 184 HNERHVIHRDIKPSNLLVNHKGEVKISDFGVSASLASSMGQRDTFVGTYNYMSPERISGS 243

Query: 252 INDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQ----GDWASLMCAICMSQPPEAPTT 307
             D     Y+ DIWSLG+S+LE  +GRFP+           +  L+ AI  + PP AP+ 
Sbjct: 244 TYD-----YSSDIWSLGMSVLECAIGRFPYLESEDQQNPPSFYELLAAIVENPPPTAPSD 298

Query: 308 A-SPEFRDFVSRCLQRDPSRRWTASRLLSHPFL 339
             SPEF  FVS C+Q+DP  R ++  LLSHPF+
Sbjct: 299 QFSPEFCSFVSACIQKDPPARASSLDLLSHPFI 331


>At4g26070 MEK1
          Length = 354

 Score =  199 bits (506), Expect = 2e-51
 Identities = 119/273 (43%), Positives = 167/273 (60%), Gaps = 19/273 (6%)

Query: 79  IPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVD 138
           +  ++LE +  IG GS G V  V H++  + +ALKVI  + EES  R I +E++I     
Sbjct: 63  LSLADLEVIKVIGKGSSGNVQLVKHKLTQQFFALKVIQLNTEESTCRAISQELRINLSSQ 122

Query: 139 DVNVVKCHEMYDHNAEIQVLLEYMDGGSLE------GKHIPQENQLADVARQILRGLAYL 192
              +V C++ + HN  + ++LE+MDGGSL       GK +P EN L+ + +++LRGL Y+
Sbjct: 123 CPYLVSCYQSFYHNGLVSIILEFMDGGSLADLLKKVGK-VP-ENMLSAICKRVLRGLCYI 180

Query: 193 HR-RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTD 251
           H  R I+HRD+KPSNLLIN R +VKI DFGV +IL  T    NS VGT  YMSPERI+  
Sbjct: 181 HHERRIIHRDLKPSNLLINHRGEVKITDFGVSKILTSTSSLANSFVGTYPYMSPERIS-- 238

Query: 252 INDGQYDAYAGDIWSLGVSILEFYMGRFPFA-VGRQGDWAS---LMCAICMSQPPEAPTT 307
              G   +   DIWSLG+ +LE   G+FP+     +  W+S   L+ AI  + PP AP+ 
Sbjct: 239 ---GSLYSNKSDIWSLGLVLLECATGKFPYTPPEHKKGWSSVYELVDAIVENPPPCAPSN 295

Query: 308 A-SPEFRDFVSRCLQRDPSRRWTASRLLSHPFL 339
             SPEF  F+S+C+Q+DP  R +A  LL H F+
Sbjct: 296 LFSPEFCSFISQCVQKDPRDRKSAKELLEHKFV 328


>At5g40440 MAP kinase kinase 3 (ATMKK3)
          Length = 520

 Score =  169 bits (428), Expect = 2e-42
 Identities = 114/276 (41%), Positives = 154/276 (55%), Gaps = 31/276 (11%)

Query: 83  ELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNV 142
           E+     IGSG+   V + +H  N R  ALK I    E   R+Q+  EI+ L +      
Sbjct: 82  EMRVFGAIGSGASSVVQRAIHIPNHRILALKKI-NIFEREKRQQLLTEIRTLCEAP---- 136

Query: 143 VKCHE-MYD-HNA-------EIQVLLEYMDGGSLEG-----KHIPQENQLADVARQILRG 188
             CHE + D H A       +I + LEYM+GGSL       K IP E  L+ +  ++L+G
Sbjct: 137 --CHEGLVDFHGAFYSPDSGQISIALEYMNGGSLADILKVTKKIP-EPVLSSLFHKLLQG 193

Query: 189 LAYLHR-RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPER 247
           L+YLH  RH+VHRDIKP+NLLIN + + KI DFG+   L  +M  C + VGT+ YMSPER
Sbjct: 194 LSYLHGVRHLVHRDIKPANLLINLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPER 253

Query: 248 INTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTT 307
           I  D       +Y  DIWSLG+++ E   G FP+ +  +G   +LM  I     P  P  
Sbjct: 254 IRNDSY-----SYPADIWSLGLALFECGTGEFPY-IANEGP-VNLMLQILDDPSPTPPKQ 306

Query: 308 A-SPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRN 342
             SPEF  F+  CLQ+DP  R TA +LLSHPF+ ++
Sbjct: 307 EFSPEFCSFIDACLQKDPDARPTADQLLSHPFITKH 342


>At1g69220 serine/threonine kinase (SIK1)
          Length = 836

 Score =  142 bits (358), Expect = 3e-34
 Identities = 95/286 (33%), Positives = 146/286 (50%), Gaps = 21/286 (7%)

Query: 80  PFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDD 139
           P ++ E LN +G GS G+VYK          A+KVI     E    +I  EI++L+  + 
Sbjct: 245 PTTKYEFLNELGKGSYGSVYKARDLKTSEIVAVKVISLTEGEEGYEEIRGEIEMLQQCNH 304

Query: 140 VNVVKCHEMYDHNAEIQVLLEYMDGGSLEG-----KHIPQENQLADVARQILRGLAYLHR 194
            NVV+    Y     + +++EY  GGS+       +   +E Q+A + R+ L+GLAYLH 
Sbjct: 305 PNVVRYLGSYQGEDYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLAYLHS 364

Query: 195 RHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDIND 254
            + VHRDIK  N+L+  + +VK+ DFGV   L +TM   N+ +GT  +M+PE I  +  D
Sbjct: 365 IYKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQENRYD 424

Query: 255 GQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPE--- 311
           G+      D+W+LGVS +E   G  P +          M  + M     AP     E   
Sbjct: 425 GKV-----DVWALGVSAIEMAEGLPPRSS------VHPMRVLFMISIEPAPMLEDKEKWS 473

Query: 312 --FRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQSPPNMHQ 355
             F DFV++CL ++P  R TA+ +L H F+ R  +  +   P + +
Sbjct: 474 LVFHDFVAKCLTKEPRLRPTAAEMLKHKFVERCKTGASAMSPKIEK 519


>At5g66850 MAP protein kinase like protein
          Length = 533

 Score =  137 bits (344), Expect = 1e-32
 Identities = 116/368 (31%), Positives = 184/368 (49%), Gaps = 32/368 (8%)

Query: 8   PPTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNGSG 67
           P +   S  +S  P ++ S P   R     +   +RD     PLPLPP     G    S 
Sbjct: 87  PSSPLHSVDSSAPPRDSVSSPLHPRLS-TDVTNGRRDCCNVHPLPLPP-----GATCSSS 140

Query: 68  SGSGGASQQLVIPF------SELERLNRIGSGSGGTVYKVVHRINGRAYALKVI--YGHH 119
           S +   S Q  +        S+ ++   IG G+ G+VY   +   G   A+K +  +   
Sbjct: 141 SAASVPSPQAPLKLDSFPMNSQWKKGKLIGRGTFGSVYVASNSETGALCAMKEVELFPDD 200

Query: 120 EESVR--RQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQ--- 174
            +S    +Q+ +EI++L ++   N+V+            + LEY+  GS+  K+I     
Sbjct: 201 PKSAECIKQLEQEIKLLSNLQHPNIVQYFGSETVEDRFFIYLEYVHPGSIN-KYIRDHCG 259

Query: 175 ---ENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGR-ILNQTM 230
              E+ + +  R IL GLAYLH +  VHRDIK +NLL+++   VK+ADFG+ + +  Q  
Sbjct: 260 TMTESVVRNFTRHILSGLAYLHNKKTVHRDIKGANLLVDASGVVKLADFGMAKHLTGQRA 319

Query: 231 DPCNSSVGTIAYMSPERINTDI-NDGQYD-AYAGDIWSLGVSILEFYMGRFPFAVGRQGD 288
           D   S  G+  +M+PE +   +  D   D A+A DIWSLG +I+E + G+ P++   + +
Sbjct: 320 D--LSLKGSPYWMAPELMQAVMQKDSNPDLAFAVDIWSLGCTIIEMFTGKPPWS---EFE 374

Query: 289 WASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQ 348
            A+ M  +    PP  P + SPE +DF+  C QR+P+ R TAS LL H FL  +    + 
Sbjct: 375 GAAAMFKVMRDSPP-IPESMSPEGKDFLRLCFQRNPAERPTASMLLEHRFLKNSLQPTSP 433

Query: 349 SPPNMHQL 356
           S  ++ QL
Sbjct: 434 SNSDVSQL 441


>At3g15220 putative MAP kinase
          Length = 690

 Score =  136 bits (343), Expect = 2e-32
 Identities = 91/284 (32%), Positives = 144/284 (50%), Gaps = 18/284 (6%)

Query: 81  FSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDV 140
           FS++E    IG GS G VYK   +   +  A+KVI     E     I +EI +L      
Sbjct: 15  FSQIEL---IGRGSFGDVYKAFDKDLNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRCP 71

Query: 141 NVVKCHEMYDHNAEIQVLLEYMDGGS----LEGKHIPQENQLADVARQILRGLAYLHRRH 196
            + + +  Y H  ++ +++EYM GGS    L+  +   E  +A + R +L  + YLH   
Sbjct: 72  YITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSNNPLDETSIACITRDLLHAVEYLHNEG 131

Query: 197 IVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQ 256
            +HRDIK +N+L++    VK+ADFGV   L +T+    + VGT  +M+PE I    N   
Sbjct: 132 KIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQ---NSEG 188

Query: 257 YDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFV 316
           Y+  A DIWSLG++++E   G  P A         ++  I    PP+     S + ++FV
Sbjct: 189 YNEKA-DIWSLGITVIEMAKGEPPLADLHP---MRVLFIIPRETPPQLDEHFSRQVKEFV 244

Query: 317 SRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQSPPNMHQLLPPP 360
           S CL++ P+ R +A  L+ H F+     N  +SP  + ++   P
Sbjct: 245 SLCLKKAPAERPSAKELIKHRFI----KNARKSPKLLERIRERP 284


>At1g63700 putative protein kinase
          Length = 883

 Score =  135 bits (341), Expect = 3e-32
 Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 29/344 (8%)

Query: 9   PTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNGSGS 68
           P + GS T S +   +++R Q  R     LPLP     L +    P S       + S  
Sbjct: 334 PRAGGSTTGSPTRRLDDNRQQSHR-----LPLPP----LLISNTCPFSPTYSAATSPSVP 384

Query: 69  GSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRR--- 125
            S   ++  V P S  ++   +G GS G VY   +  +G   A+K +    ++   R   
Sbjct: 385 RSPARAEATVSPGSRWKKGRLLGMGSFGHVYLGFNSESGEMCAMKEVTLCSDDPKSRESA 444

Query: 126 -QIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQ-----ENQLA 179
            Q+ +EI +L  +   N+V+ +     + ++ + LEY+ GGS+  K + +     EN + 
Sbjct: 445 QQLGQEISVLSRLRHQNIVQYYGSETVDDKLYIYLEYVSGGSIY-KLLQEYGQFGENAIR 503

Query: 180 DVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGT 239
           +  +QIL GLAYLH ++ VHRDIK +N+L++   +VK+ADFG+ + +     P  S  G+
Sbjct: 504 NYTQQILSGLAYLHAKNTVHRDIKGANILVDPHGRVKVADFGMAKHITAQSGPL-SFKGS 562

Query: 240 IAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMS 299
             +M+PE I            A DIWSLG ++LE    + P++   Q +    M  I  S
Sbjct: 563 PYWMAPEVIKNSNGSN----LAVDIWSLGCTVLEMATTKPPWS---QYEGVPAMFKIGNS 615

Query: 300 QP-PEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRN 342
           +  P+ P   S E +DFV +CLQR+P+ R TA++LL H F VRN
Sbjct: 616 KELPDIPDHLSEEGKDFVRKCLQRNPANRPTAAQLLDHAF-VRN 658


>At1g53570 MEK kinase MAP3Ka, putative
          Length = 609

 Score =  134 bits (337), Expect = 8e-32
 Identities = 100/306 (32%), Positives = 162/306 (52%), Gaps = 18/306 (5%)

Query: 43  RDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVV 102
           R ++   PLP PP+  +       GS  GG  +     FS  ++   +GSG+ G VY   
Sbjct: 174 RSSSECHPLPRPPTSPTSPSAV-HGSRIGGGYETSPSGFSTWKKGKFLGSGTFGQVYLGF 232

Query: 103 HRINGRAYALKVIYGHHEESVRR----QIHREIQILRDVDDVNVVKCHEMYDHNAEIQVL 158
           +   G+  A+K +    ++   +    Q+++EI +L  +   N+V+ +        + V 
Sbjct: 233 NSEKGKMCAIKEVKVISDDQTSKECLKQLNQEINLLNQLCHPNIVQYYGSELSEETLSVY 292

Query: 159 LEYMDGGS----LEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQ 214
           LEY+ GGS    L+      E  + +  RQIL GLAYLH R+ VHRDIK +N+L++   +
Sbjct: 293 LEYVSGGSIHKLLKDYGSFTEPVIQNYTRQILAGLAYLHGRNTVHRDIKGANILVDPNGE 352

Query: 215 VKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEF 274
           +K+ADFG+ + +        S  G+  +M+PE +   ++   Y  +A DIWSLG +ILE 
Sbjct: 353 IKLADFGMAKHVT-AFSTMLSFKGSPYWMAPEVV---MSQNGY-THAVDIWSLGCTILEM 407

Query: 275 YMGRFPFAVGRQGDWASLMCAICMSQ-PPEAPTTASPEFRDFVSRCLQRDPSRRWTASRL 333
              + P++   Q +  + +  I  S+  PE P   S + ++F+  CLQR+P+ R TAS+L
Sbjct: 408 ATSKPPWS---QFEGVAAIFKIGNSKDTPEIPDHLSNDAKNFIRLCLQRNPTVRPTASQL 464

Query: 334 LSHPFL 339
           L HPFL
Sbjct: 465 LEHPFL 470


>At1g09000 NPK1-related protein kinase 1S (ANP1)
          Length = 666

 Score =  131 bits (330), Expect = 5e-31
 Identities = 87/264 (32%), Positives = 145/264 (53%), Gaps = 19/264 (7%)

Query: 90  IGSGSGGTVYKVVHRINGRAYALK--VIYGHHEESVRRQIH-----REIQILRDVDDVNV 142
           IG G+ GTVY  ++  +G   A+K  +I  +     + Q H      E+++L+++   N+
Sbjct: 75  IGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPNI 134

Query: 143 VKCHEMYDHNAEIQVLLEYMDGGSLEG---KHIP-QENQLADVARQILRGLAYLHRRHIV 198
           V+       +  + +LLE++ GGS+     K  P  E+ +    RQ+L GL YLH   I+
Sbjct: 135 VRYLGTVREDDTLNILLEFVPGGSISSLLEKFGPFPESVVRTYTRQLLLGLEYLHNHAIM 194

Query: 199 HRDIKPSNLLINSRKQVKIADFGVGRILNQ--TMDPCNSSVGTIAYMSPERINTDINDGQ 256
           HRDIK +N+L++++  +K+ADFG  + + +  TM    S  GT  +M+PE I   +  G 
Sbjct: 195 HRDIKGANILVDNKGCIKLADFGASKQVAELATMTGAKSMKGTPYWMAPEVI---LQTGH 251

Query: 257 YDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFV 316
             +++ DIWS+G +++E   G+ P++   +   A        S PP  P T S + +DF+
Sbjct: 252 --SFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPP-IPDTLSSDAKDFL 308

Query: 317 SRCLQRDPSRRWTASRLLSHPFLV 340
            +CLQ  P+ R TAS LL HPF++
Sbjct: 309 LKCLQEVPNLRPTASELLKHPFVM 332


>At2g45490 putative protein kinase
          Length = 288

 Score =  129 bits (323), Expect = 3e-30
 Identities = 88/282 (31%), Positives = 141/282 (49%), Gaps = 20/282 (7%)

Query: 68  SGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEES--VRR 125
           S +G   +Q  +   E+ R   +G G  G VY      +    ALKVI+    E   +  
Sbjct: 8   SDAGNTEKQWSLADFEIGR--PLGKGKFGRVYLAREAKSKYIVALKVIFKEQIEKYKIHH 65

Query: 126 QIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGK-----HIPQENQLAD 180
           Q+ RE++I   +   N+++    +  N  I ++LEY  GG L G      H+  E Q A 
Sbjct: 66  QLRREMEIQTSLRHPNILRLFGWFHDNERIFLILEYAHGGELYGVLKQNGHLT-EQQAAT 124

Query: 181 VARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTI 240
               + + LAY H + ++HRDIKP NLL++   ++KIADFG      Q+ +   +  GT+
Sbjct: 125 YIASLSQALAYCHGKCVIHRDIKPENLLLDHEGRLKIADFGWS---VQSSNKRKTMCGTL 181

Query: 241 AYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQ 300
            Y++PE +    +D     YA D W+LG+   EF  G  PF    Q D    +  I +S 
Sbjct: 182 DYLAPEMVENRDHD-----YAVDNWTLGILCYEFLYGNPPFEAESQKDTFKRILKIDLSF 236

Query: 301 PPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRN 342
           P       S E ++ +S+ L +DPS+R +  +++ HP++V+N
Sbjct: 237 P--LTPNVSEEAKNLISQLLVKDPSKRLSIEKIMQHPWIVKN 276


>At4g08500 MEKK1/MAP kinase kinase kinase
          Length = 608

 Score =  128 bits (321), Expect = 6e-30
 Identities = 89/261 (34%), Positives = 141/261 (53%), Gaps = 19/261 (7%)

Query: 90  IGSGSGGTVYKVVHRINGRAYALKVI----YGHHEESVRRQIHREIQILRDVDDVNVVKC 145
           +G GS G+VY+ +   +G  +A+K +     G   +   +Q+  EI++L  +   N+V+ 
Sbjct: 339 LGRGSFGSVYEGISG-DGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQLQHQNIVRY 397

Query: 146 HEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLAD-----VARQILRGLAYLHRRHIVHR 200
                  + + + LE +  GSL    + Q  QL D       RQIL GL YLH +  +HR
Sbjct: 398 RGTAKDGSNLYIFLELVTQGSL--LKLYQRYQLRDSVVSLYTRQILDGLKYLHDKGFIHR 455

Query: 201 DIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAY 260
           DIK +N+L+++   VK+ADFG+ ++     +   S  GT  +M+PE IN   +DG Y + 
Sbjct: 456 DIKCANILVDANGAVKLADFGLAKV--SKFNDIKSCKGTPFWMAPEVINRKDSDG-YGSP 512

Query: 261 AGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCL 320
           A DIWSLG ++LE   G+ P++     +    +  I     PE P T S + R F+ +CL
Sbjct: 513 A-DIWSLGCTVLEMCTGQIPYS---DLEPVQALFRIGRGTLPEVPDTLSLDARLFILKCL 568

Query: 321 QRDPSRRWTASRLLSHPFLVR 341
           + +P  R TA+ LL+HPF+ R
Sbjct: 569 KVNPEERPTAAELLNHPFVRR 589


>At1g50230 hypothetical protein
          Length = 269

 Score =  126 bits (317), Expect = 2e-29
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 17/256 (6%)

Query: 90  IGSGSGGTVYKVVHRINGRAYALKVIY--GHHEESVRRQIHREIQILRDVDDVNVVKCHE 147
           +G GS G VYK   +  G+  A+K I   G  ++ +   + +EI+ILR +   N+++  +
Sbjct: 12  VGEGSFGRVYKGRRKYTGQTVAMKFIMKQGKTDKDIH-SLRQEIEILRKLKHENIIEMLD 70

Query: 148 MYDHNAEIQVLLEYMDGGSLE----GKHIPQENQLADVARQILRGLAYLHRRHIVHRDIK 203
            +++  E  V+ E+  G   E     K +P+E Q+  +A+Q+++ L YLH   I+HRD+K
Sbjct: 71  SFENAREFCVVTEFAQGELFEILEDDKCLPEE-QVQAIAKQLVKALDYLHSNRIIHRDMK 129

Query: 204 PSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGD 263
           P N+LI +   VK+ DFG  R ++       S  GT  YM+PE     + +  YD    D
Sbjct: 130 PQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPEL----VKEQPYDRTV-D 184

Query: 264 IWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRD 323
           +WSLGV + E Y+G+ PF           +    +  P + P   S  F  F+   L ++
Sbjct: 185 LWSLGVILYELYVGQPPFYTNS----VYALIRHIVKDPVKYPDEMSTYFESFLKGLLNKE 240

Query: 324 PSRRWTASRLLSHPFL 339
           P  R T   L  HPF+
Sbjct: 241 PHSRLTWPALREHPFV 256


>At3g06030 NPK1-related protein kinase 3
          Length = 651

 Score =  126 bits (316), Expect = 2e-29
 Identities = 81/263 (30%), Positives = 144/263 (53%), Gaps = 19/263 (7%)

Query: 90  IGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVR-------RQIHREIQILRDVDDVNV 142
           IG G+ G VY  ++  +G   A+K +      + +       R++  E+Q+L+++   N+
Sbjct: 74  IGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNI 133

Query: 143 VKCHEMYDHNAEIQVLLEYMDGGS----LEGKHIPQENQLADVARQILRGLAYLHRRHIV 198
           V+       +  + +L+E++ GGS    LE      E  +    +Q+L GL YLH   I+
Sbjct: 134 VRYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLGLEYLHNNGIM 193

Query: 199 HRDIKPSNLLINSRKQVKIADFGVGRILNQ--TMDPCNSSVGTIAYMSPERINTDINDGQ 256
           HRDIK +N+L++++  +++ADFG  + + +  T++   S  GT  +M+PE I   +  G 
Sbjct: 194 HRDIKGANILVDNKGCIRLADFGASKKVVELATVNGAKSMKGTPYWMAPEVI---LQTGH 250

Query: 257 YDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFV 316
             +++ DIWS+G +++E   G+ P++   Q   A L      + PP  P   SPE +DF+
Sbjct: 251 --SFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPP-IPEDLSPEAKDFL 307

Query: 317 SRCLQRDPSRRWTASRLLSHPFL 339
            +CL ++PS R +A+ LL HPF+
Sbjct: 308 MKCLHKEPSLRLSATELLQHPFV 330


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.136    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,515,804
Number of Sequences: 26719
Number of extensions: 474289
Number of successful extensions: 9916
Number of sequences better than 10.0: 1133
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 4031
Number of HSP's gapped (non-prelim): 3056
length of query: 366
length of database: 11,318,596
effective HSP length: 101
effective length of query: 265
effective length of database: 8,619,977
effective search space: 2284293905
effective search space used: 2284293905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)


Medicago: description of AC144503.4