BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144459.10 + phase: 0
(167 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18990 unknown protein 92 1e-19
At4g01580 hypothetical protein 78 3e-15
At1g49475 putative protein 77 6e-15
At3g18960 unknown protein 74 4e-14
At5g66980 putative protein 51 3e-07
At5g18000 putative protein 49 2e-06
At3g06220 hypothetical protein 46 8e-06
At2g35310 Unknown protein 46 8e-06
At5g25465 unknown protein 46 1e-05
At4g33280 hypothetical protein 45 1e-05
At4g31640 unknown protein (At4g31640) 45 1e-05
At1g16640 Unknown protein 45 2e-05
At5g09780 putative protein 45 2e-05
At3g53310 unknown protein 44 3e-05
At4g31690 putative protein 43 9e-05
At4g31680 putative protein 43 9e-05
At4g31660 putative protein 43 9e-05
At3g46770 putative protein 43 9e-05
At4g34400 putative protein 42 1e-04
At5g25475 unknown protein 42 2e-04
>At3g18990 unknown protein
Length = 341
Score = 92.0 bits (227), Expect = 1e-19
Identities = 40/84 (47%), Positives = 60/84 (70%)
Query: 10 RIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFI 69
R+PD+F+++F +EL+ +TVPDG VW++ L+K ++F + WQEFV+ YSI G +
Sbjct: 21 RVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLL 80
Query: 70 SFKYEGNSKFSVIIFDATSVEISY 93
F+YEGNS FSV IF+ + EI+Y
Sbjct: 81 IFRYEGNSAFSVYIFNLSHSEINY 104
>At4g01580 hypothetical protein
Length = 190
Score = 77.8 bits (190), Expect = 3e-15
Identities = 37/89 (41%), Positives = 56/89 (62%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
M RIP F+ G++L+ V T+ P G ++LK+ GE ++F W EF E +SI G
Sbjct: 43 MMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102
Query: 68 FISFKYEGNSKFSVIIFDATSVEISYPFE 96
F+ F+Y+ NS F VIIF+A++ E +YP +
Sbjct: 103 FLLFEYKKNSSFRVIIFNASACETNYPLD 131
>At1g49475 putative protein
Length = 250
Score = 76.6 bits (187), Expect = 6e-15
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
M ++P F+ RFG +L + T+ P G + +K+ G+ V+F W EF E +S+ G
Sbjct: 47 MMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGH 105
Query: 68 FISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPK--------TNYPSSRKRSKVET 119
F+ F YEG+S F V+IFD ++ EI YP + N E T + SS +V
Sbjct: 106 FLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVD 165
Query: 120 CERLRKKVK 128
+ L KK K
Sbjct: 166 MDELLKKKK 174
>At3g18960 unknown protein
Length = 209
Score = 73.9 bits (180), Expect = 4e-14
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
M +IP F+ G++L+ V T+ P G ++LK+ GE ++F W EF E +SI G
Sbjct: 43 MMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102
Query: 68 FISFKYEGNSKFSVIIFDATSVEISYPFE 96
F+ F+Y+ NS F VIIF+ ++ E YP +
Sbjct: 103 FLLFEYKENSSFRVIIFNVSACETKYPLD 131
>At5g66980 putative protein
Length = 334
Score = 51.2 bits (121), Expect = 3e-07
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 11 IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGEN----VFFCNKWQEFVEYYSIGYG 66
IP FI L A + GR+W +E K VFF WQ F S+ +G
Sbjct: 25 IPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSLEFG 84
Query: 67 CFISFKYEGNSKFSVIIF 84
F+ F Y+G+S+FSV IF
Sbjct: 85 DFLVFSYDGDSRFSVTIF 102
>At5g18000 putative protein
Length = 307
Score = 48.5 bits (114), Expect = 2e-06
Identities = 30/121 (24%), Positives = 62/121 (50%), Gaps = 8/121 (6%)
Query: 7 LMQRIPDEFITRFGNELNNVATIT-VPDGRVWKMELKKRGENVFFCNK-WQEFVEYYSIG 64
+M+ IP I ++ ++ + VP GR W++++ K + ++ W +FV +G
Sbjct: 33 MMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLG 92
Query: 65 YGCFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNG------EPKTNYPSSRKRSKVE 118
+++F +E N F+V IF+A E+ P +T +++ E K+ Y +K ++E
Sbjct: 93 ENEYLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKREERKSIYKDVKKEEEIE 152
Query: 119 T 119
+
Sbjct: 153 S 153
>At3g06220 hypothetical protein
Length = 175
Score = 46.2 bits (108), Expect = 8e-06
Identities = 21/77 (27%), Positives = 37/77 (47%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
++ IP + L A +T GRVWK+ + + E V+ W+ FV + G
Sbjct: 23 LKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGE 82
Query: 68 FISFKYEGNSKFSVIIF 84
F++F ++G + V I+
Sbjct: 83 FLTFVFDGYKSYEVSIY 99
>At2g35310 Unknown protein
Length = 288
Score = 46.2 bits (108), Expect = 8e-06
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 8 MQRIPDEFITRFGN-ELNNVATITVPDGRVWKMELKKRGENVFFCNK--WQEFVEYYSIG 64
M+ +P +F+ F N EL+ I G W++E+ K +F K W++FV ++G
Sbjct: 33 MRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICKN-PRFYFMEKSGWEKFVSDNALG 91
Query: 65 YGCFISFKYEGNSKFSVIIFDATSVEISYPFETPS 99
F++F ++GN +F+V IF E+ P ++ S
Sbjct: 92 ASEFLTFTHKGNMRFTVNIFMQDGKEMLQPPQSMS 126
>At5g25465 unknown protein
Length = 280
Score = 45.8 bits (107), Expect = 1e-05
Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 26/168 (15%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNK-WQEFVEYYSIGYG 66
M+ P+EF+ + +V G W++ L++ +++F + W EFV+ +G
Sbjct: 34 MRSFPEEFVKSTPGAFEHRVVFSVRWGNSWQLWLEREEKDLFMIEEDWDEFVDDNHLGPN 93
Query: 67 CFISFKYEGNSKFSVIIFDATSVEI----------SYPFETPSTNGEPKTNYPSSRKRSK 116
+ F+++ V IF EI + PF + K +S S
Sbjct: 94 DNVFFRHDDKMFLEVQIFKNDGNEIIDAPPEVEPETEPFHPTTPKNSHKETTTASASASA 153
Query: 117 VETCERLRKK-----VKNMSKYASKRVEDAAKELNPNNPYFRSKIVKG 159
E + R+ +KN Y LNP NPYF + KG
Sbjct: 154 SEFSDNWRETHGCADIKNPELYL----------LNPKNPYFVKTLTKG 191
>At4g33280 hypothetical protein
Length = 461
Score = 45.4 bits (106), Expect = 1e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 7 LMQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVF-FCNKWQEFVEYYSIGY 65
L+Q IP +F T +L + T+ P G + + +++ E F W +FV+ +S+
Sbjct: 104 LLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEE 163
Query: 66 GCFISFKYEGNSKFSVIIFDATSV 89
+ FK+ G S+F V++FD ++
Sbjct: 164 NDLLVFKFHGVSEFEVLVFDGQTL 187
>At4g31640 unknown protein (At4g31640)
Length = 352
Score = 45.4 bits (106), Expect = 1e-05
Identities = 32/113 (28%), Positives = 52/113 (45%), Gaps = 8/113 (7%)
Query: 10 RIPDEFITRF---GNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYG 66
+IP +F ++ +E N V + P R WK+++ E W+EFVE + + G
Sbjct: 27 KIPVKFFSKHIEGKHEGNTVYLRSYPSRRTWKVKM----EGHKLTEGWKEFVEAHDLRVG 82
Query: 67 CFISFKYEGNSKFSVIIFDATSVEISY-PFETPSTNGEPKTNYPSSRKRSKVE 118
F+ FK++G+ F V + E+ Y P + N E SSR +E
Sbjct: 83 DFVVFKHKGDMLFHVTAIGPSCCEVQYAPSRSHDRNEESDEIGESSRNEKIIE 135
>At1g16640 Unknown protein
Length = 134
Score = 45.1 bits (105), Expect = 2e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 34 GRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFSVIIF 84
GR W + +KKRGE VF W+ FV+ ++ G ++ F Y+ + F VII+
Sbjct: 47 GRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIY 97
>At5g09780 putative protein
Length = 308
Score = 44.7 bits (104), Expect = 2e-05
Identities = 39/147 (26%), Positives = 71/147 (47%), Gaps = 15/147 (10%)
Query: 11 IPDEFITRFG-NELNNVATITVPDGRVWKMELKKRGENVFFCNK--WQEFVEYYSIGYGC 67
IP +F+ F NEL+ V G WK+++ K +F K W++FV ++G
Sbjct: 36 IPYDFVINFSDNELSGDMKFRVQWGNSWKVKISKN-PRFYFMEKSGWEKFVIDNALGDHE 94
Query: 68 FISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPKTNYPSSRKRSKVETCERLRKKV 127
F++F ++G F+V IF+ E+ P + + ++ SS S+V+T + ++++
Sbjct: 95 FLTFTHKGQMSFTVKIFNKDGKEMMQP-------PQSRASFASS---SRVKTEQDVKREE 144
Query: 128 KNM-SKYASKRVEDAAKELNPNNPYFR 153
+ + S + R A E N Y R
Sbjct: 145 EVLVSSDSRSRGPTTAAETNRGGSYKR 171
>At3g53310 unknown protein
Length = 286
Score = 44.3 bits (103), Expect = 3e-05
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 11 IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
IP F+ + L + G++W + LKK + W +F E + + G F++
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 71 FKYEGNSKFSVIIFD 85
F Y+G+ F V +FD
Sbjct: 86 FVYDGHRTFEVSVFD 100
>At4g31690 putative protein
Length = 461
Score = 42.7 bits (99), Expect = 9e-05
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 21 NELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFS 80
+E V T R W E+K G + W+EFVE + + G F+ F++EG+ F
Sbjct: 41 HEGKTVTLRTDASERTW--EVKMEGHRL--TEGWKEFVEAHDLRIGDFVVFRHEGDMVFH 96
Query: 81 VIIFDATSVEISYPFETPSTNGEPKTNYPSSRKRSK 116
V + EI YP + GE S K +
Sbjct: 97 VTALGPSCCEIQYPQSSRHEEGEESGENEISEKEGE 132
>At4g31680 putative protein
Length = 478
Score = 42.7 bits (99), Expect = 9e-05
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 7 LMQRIPDEFITRFGNELNNVATITV---PDGRVWKMELKKRGENVFFCNKWQEFVEYYSI 63
L+Q IP +F + + T+ + R W E+K G + W+EFVE + +
Sbjct: 33 LLQNIPVKFFSEHIEGKHEGETVKLRADASKRTW--EVKMDGNRL--TEGWKEFVEAHDL 88
Query: 64 GYGCFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPKTN---YPSSRKRSKVETC 120
F+ F++EG+ F V + EI YP GE SS K S+ E
Sbjct: 89 RIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGEVGMIESSFKISEREVE 148
Query: 121 ERLRKKVKNMS 131
E L+K+ S
Sbjct: 149 ENLQKEYDQSS 159
>At4g31660 putative protein
Length = 344
Score = 42.7 bits (99), Expect = 9e-05
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 21 NELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFS 80
NE V T + W+++++ R V W+EF + G I F++EG+ F
Sbjct: 41 NEGRTVELRTDASEKTWQVKIQGRRLTV----GWKEFASAHDFRVGDIIVFRHEGSLVFH 96
Query: 81 VIIFDATSVEISYPFETPSTNGEPKTNYPSSRKRSKVETCERLRKKVKNMSKYASKR 137
V + EI Y PS N + + S ++ K E L + NM K+ K+
Sbjct: 97 VTALGPSCCEIQY---VPSCNNQENISNLSMKQSIKTELESSLDEDKVNMGKFPRKK 150
>At3g46770 putative protein
Length = 276
Score = 42.7 bits (99), Expect = 9e-05
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 26 VATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFSVIIFD 85
V +V G +W+ME+K G VF + W++ V+ ++ F+ F+++G F +++
Sbjct: 54 VTVKSVSSGNIWRMEMKANGNTVFLRDGWKKIVKDENVTEPIFLEFEFDGYGVFHFCVYE 113
Query: 86 ATSV 89
S+
Sbjct: 114 YGSM 117
>At4g34400 putative protein
Length = 389
Score = 42.4 bits (98), Expect = 1e-04
Identities = 44/174 (25%), Positives = 61/174 (34%), Gaps = 24/174 (13%)
Query: 11 IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
IP + + + P G WK+ + + + V F W +FV ++ G F++
Sbjct: 31 IPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPKFVRDNTLNDGDFLT 90
Query: 71 FKYEGNSKFSVIIF----------DATSVE-------ISYPFETPST--NGEPKTNYPSS 111
F Y G F V IF + T +E IS E T E K P
Sbjct: 91 FAYNGAHIFEVSIFRGYDACKEISEVTELEEEEEDSVISLSSEDTDTGAKSEMKNTVPEG 150
Query: 112 RK--RSKVETCERLRKKVKNMSKYASKRVE---DAAKELNPNNPYFRSKIVKGK 160
R +SKVE E + S Y+ E D E P KGK
Sbjct: 151 RDKGKSKVEVVEDSDDDEEEDSVYSESSEETETDTDSEFKVAKPTIPKSQKKGK 204
>At5g25475 unknown protein
Length = 282
Score = 41.6 bits (96), Expect = 2e-04
Identities = 41/165 (24%), Positives = 67/165 (39%), Gaps = 19/165 (11%)
Query: 8 MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNK-WQEFVEYYSIGYG 66
M+ IP++F+ R + +V W++ L++ +F + W EFV+ +G
Sbjct: 34 MRIIPEDFVRRTRGAFEHRVVFSVRWENSWQLWLEREKNELFMIEEDWNEFVDDNHLGPN 93
Query: 67 CFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPKTN--YPSSRKRSKVET----- 119
+ K++ V IF VEI + P EP+T +P+ +K K T
Sbjct: 94 DNLFIKHDETMNLEVQIFKNNGVEI---IDVP-LGVEPETEPFHPTPKKPHKETTPASSF 149
Query: 120 -----CERLRKKVKNMSKYASKRVEDAAKE-LNPNNPYFRSKIVK 158
C K S V++ + LNP NPYF + K
Sbjct: 150 ASGSGCS-ANGGTNGRGKQRSSDVKNPERYLLNPENPYFVQAVTK 193
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,053,712
Number of Sequences: 26719
Number of extensions: 170069
Number of successful extensions: 627
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 566
Number of HSP's gapped (non-prelim): 68
length of query: 167
length of database: 11,318,596
effective HSP length: 92
effective length of query: 75
effective length of database: 8,860,448
effective search space: 664533600
effective search space used: 664533600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC144459.10