BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144375.7 - phase: 0 
         (123 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g20693 unknown protein                                             123  3e-29
At1g20696 unknown protein                                             119  4e-28
At3g51880 high mobility group protein 2-like                          117  1e-27
At2g17560 putative HMG protein                                         99  4e-22
At4g35570 HMG delta protein                                            84  2e-17
At5g23420 unknown protein                                              75  8e-15
At2g34451 putative HMG protein                                         65  6e-12
At4g23800 98b like protein                                             57  3e-09
At1g63980 unknown protein                                              47  2e-06
At4g11080 98b like protein                                             47  2e-06
At3g28730 recombination signal sequence recognition protein, put...    47  2e-06
At3g50550 unknown protein                                              44  2e-05
At2g34210 putative transcription elongation factor                     40  3e-04
At1g49900 Cys2/His2-type zinc finger protein, putative                 40  3e-04
At2g11910 unknown protein                                              39  5e-04
At1g02040 hypothetical protein                                         39  6e-04
At1g69070 hypothetical protein                                         38  0.001
At5g61470 putative protein                                             37  0.002
At3g07220 unknown protein                                              37  0.002
At2g21420 Mutator-like transposase                                     37  0.002

>At1g20693 unknown protein
          Length = 144

 Score =  123 bits (308), Expect = 3e-29
 Identities = 64/117 (54%), Positives = 82/117 (69%), Gaps = 9/117 (7%)

Query: 4   KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
           K A  DP+KPKRP S FF+FM DFR  F+KENP NK V+ VGKAAG+KW+S+SD+EK   
Sbjct: 29  KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 88

Query: 61  -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
                K+K+EY K I AYNKK+        +S  KS SE+ND+DD +D +EEEE++D
Sbjct: 89  VAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEEEDDD 144


>At1g20696 unknown protein
          Length = 141

 Score =  119 bits (298), Expect = 4e-28
 Identities = 61/117 (52%), Positives = 82/117 (69%), Gaps = 9/117 (7%)

Query: 4   KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
           K A  DP+KPKRP S FF+FM DFRV +++E+P NK V+ VGKA GEKW+S+SD+EK   
Sbjct: 26  KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPY 85

Query: 61  -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
                K+K+EY K + AYNKK+        +S  KS SE+ND+DD +D +EEEE++D
Sbjct: 86  VAKADKRKVEYEKNMKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEEEDDD 141


>At3g51880 high mobility group protein 2-like
          Length = 178

 Score =  117 bits (293), Expect = 1e-27
 Identities = 66/131 (50%), Positives = 80/131 (60%), Gaps = 24/131 (18%)

Query: 4   KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
           KKAK DP+KPKR  S FF+F+ DFRV F+KENP+ K VS VGKA G+KW+SMS AEK   
Sbjct: 44  KKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPY 103

Query: 61  -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDD------------D 103
                K+K EY K + AYNK +      S     KS SE+ND+D+              D
Sbjct: 104 EEKAAKRKAEYEKQMDAYNKNLEEGSDES----EKSRSEINDEDEASGEEELLEKEAAGD 159

Query: 104 DNEEEEEEDDE 114
           D EEEEEEDD+
Sbjct: 160 DEEEEEEEDDD 170


>At2g17560 putative HMG protein
          Length = 138

 Score = 99.4 bits (246), Expect = 4e-22
 Identities = 51/120 (42%), Positives = 75/120 (62%), Gaps = 13/120 (10%)

Query: 2   ARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK- 60
           A KK K DP++PKRP S FF+F+ DFR  F   NP+NK V+ VGKAAG +W++M+D +K 
Sbjct: 24  AGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKA 83

Query: 61  -------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDD 113
                   +K EY+K +  YN K+A     SG +  + +S+ +  + D+  +EEE E+DD
Sbjct: 84  PYVAKAESRKTEYIKNVQQYNLKLA-----SGTNREEDDSDKSKSEVDEAVSEEEAEDDD 138


>At4g35570 HMG delta protein
          Length = 125

 Score = 83.6 bits (205), Expect = 2e-17
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 25/117 (21%)

Query: 5   KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
           K   DP++PK+P SPFF+F+ DFR  F   NPDNK V  VG+AAG+KW++M++ E+    
Sbjct: 26  KKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFV 85

Query: 61  ----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDD 113
                KK EY   +  YN ++A    ++G                 DD ++E+  DD
Sbjct: 86  AKSQSKKTEYAVTMQQYNMELANGNKTTG-----------------DDEKQEKAADD 125


>At5g23420 unknown protein
          Length = 241

 Score = 75.1 bits (183), Expect = 8e-15
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 7/113 (6%)

Query: 4   KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKKKK 63
           KK+ S  +KPKRP + FF+FMSDFR  F+ E+ +        K  GEKW+S+++ EKK  
Sbjct: 106 KKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTEEEKKVY 164

Query: 64  MEYVKAIHA-YNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDEV 115
           ++    + A YNK +      S  +  +   E    DD DD  E++ ++DDEV
Sbjct: 165 LDKAAELKAEYNKSL-----ESNDADEEEEDEEKQSDDVDDAEEKQVDDDDEV 212


>At2g34451 putative HMG protein
          Length = 151

 Score = 65.5 bits (158), Expect = 6e-12
 Identities = 35/113 (30%), Positives = 58/113 (50%), Gaps = 22/113 (19%)

Query: 3   RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK-- 60
           +K  K     PK+P + FF F+ DFR ++++ENPD K +  +GK  GEKW++M+  EK  
Sbjct: 53  KKPVKLQTKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVK 112

Query: 61  ------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEE 107
                 +K+ E+ +A+  Y K++               S  +D+ + D D  E
Sbjct: 113 YYDIATEKREEFHRAMTEYTKRM--------------ESGAHDESETDSDYSE 151


>At4g23800 98b like protein
          Length = 456

 Score = 56.6 bits (135), Expect = 3e-09
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 9/89 (10%)

Query: 3   RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKK- 61
           +K    DP+KPK+P S +FLF  D R +  +E P     +V       KW+ +S+ EK+ 
Sbjct: 369 KKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTA-LISLKWKELSEEEKQV 427

Query: 62  ------KKME-YVKAIHAYNKKVAGKKSS 83
                 K ME Y K + AYNKK A   SS
Sbjct: 428 YNGKAAKLMEAYKKEVEAYNKKSAATTSS 456



 Score = 53.1 bits (126), Expect = 3e-08
 Identities = 34/110 (30%), Positives = 60/110 (53%), Gaps = 17/110 (15%)

Query: 3   RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKKK 62
           + K + DP KPK P S F ++ ++ R   R+EN   K V  V K  GE+W+++SD   KK
Sbjct: 245 KNKKEKDPLKPKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSD---KK 298

Query: 63  KMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
           K  Y        +KVA K     ++++++  E     +++  ++++EEE+
Sbjct: 299 KAPY--------EKVAKKNK---ETYLQAMEEYKRTKEEEALSQKKEEEE 337



 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 28/81 (34%), Positives = 40/81 (48%), Gaps = 2/81 (2%)

Query: 2   ARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKK 61
           A KK K D  + KRP S + L+  D     +KENP+  +        G KW+S+S  +KK
Sbjct: 127 ANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEADF-KETSNILGAKWKSLSAEDKK 185

Query: 62  KKME-YVKAIHAYNKKVAGKK 81
              E Y     AY + +A +K
Sbjct: 186 PYEERYQVEKEAYLQVIAKEK 206


>At1g63980 unknown protein
          Length = 391

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 41/77 (52%), Gaps = 9/77 (11%)

Query: 46  KAAGEKWRSMSDAEKKKKMEYVKA--------IHAYNKKVAGKKSSSGKSFVKSNSELND 97
           KA+  K  S +D E    M   KA        I    KK+AG +   GK     NS+ +D
Sbjct: 212 KASERKMFSENDQENLYNMVQDKATAGKQGLGIKDRPKKIAGVRYE-GKKTSFDNSDDDD 270

Query: 98  DDDDDDDNEEEEEEDDE 114
           DDDDDDD E+EEE++DE
Sbjct: 271 DDDDDDDEEDEEEDEDE 287



 Score = 37.7 bits (86), Expect = 0.001
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 28  RVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKKKKMEYVKAIHAYNKKVAGKKSSSGKS 87
           R  F + + +N Y  V  KA   K + +   ++ KK+  V+          GKK+S   S
Sbjct: 216 RKMFSENDQENLYNMVQDKATAGK-QGLGIKDRPKKIAGVR--------YEGKKTSFDNS 266

Query: 88  FVKSNSELNDDDDDDDDNEEEEEEDDE 114
               + + +DD++D++++E+E E DD+
Sbjct: 267 DDDDDDDDDDDEEDEEEDEDESEADDD 293



 Score = 25.8 bits (55), Expect = 5.6
 Identities = 9/17 (52%), Positives = 14/17 (81%)

Query: 100 DDDDDNEEEEEEDDEVR 116
           +DDD ++E+E EDD V+
Sbjct: 90  NDDDSDKEDESEDDAVK 106


>At4g11080 98b like protein
          Length = 446

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 28/83 (33%), Positives = 46/83 (54%), Gaps = 13/83 (15%)

Query: 3   RKKAKS--DPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAE- 59
           +KKAK   DP KPK+P S + ++ ++ R   + EN   K V  V K AGE+W+++S+ + 
Sbjct: 234 KKKAKKIKDPLKPKQPISAYLIYANERRAALKGEN---KSVIEVAKMAGEEWKNLSEEKK 290

Query: 60  -------KKKKMEYVKAIHAYNK 75
                  KK K  Y++ +  Y +
Sbjct: 291 APYDQMAKKNKEIYLQEMEGYKR 313



 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 3   RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPD------NKYVSVVGKAAGEKWRSMS 56
           +K    DP+KPK+P S +FLF  D R    +E+P         ++S+     GE+ + + 
Sbjct: 362 KKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVY 421

Query: 57  DAEKKKKME-YVKAIHAYNK 75
           +++  + ME Y K +  YNK
Sbjct: 422 NSKAAELMEAYKKEVEEYNK 441



 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 4   KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKKKK 63
           KK K D ++ KRP +P+ L+  D     +K+NP+  +        G KW+ +S  EKK  
Sbjct: 120 KKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPEADF-KETSNILGAKWKGISAEEKKPY 178

Query: 64  MEYVKA 69
            E  +A
Sbjct: 179 EEKYQA 184


>At3g28730 recombination signal sequence recognition protein,
           putative
          Length = 646

 Score = 47.0 bits (110), Expect = 2e-06
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)

Query: 3   RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEKKK 62
           + K K DP+ PKR  S F  F    R   +KE+P   +   VGK  G+KWR MS  +K+ 
Sbjct: 552 KPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAF-GEVGKVLGDKWRQMSADDKEP 610

Query: 63  KMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDN 105
                   +    +V  ++     S  K+   +N D  +D D+
Sbjct: 611 --------YEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645


>At3g50550 unknown protein
          Length = 95

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 1/43 (2%)

Query: 74  NKKVAGKKSSSGKS-FVKSNSELNDDDDDDDDNEEEEEEDDEV 115
           ++ ++G  S S +  +  SNS+ +DDD++DDD+EEEEEE+D +
Sbjct: 40  DRNLSGDDSESSEDDYTDSNSDSDDDDEEDDDDEEEEEEEDSL 82



 Score = 32.7 bits (73), Expect = 0.046
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 91  SNSELNDDDDDDDDNE-EEEEEDDE 114
           S+ E ++DDDDDDD + E  +EDDE
Sbjct: 13  SDEEYDEDDDDDDDTDGESSDEDDE 37



 Score = 31.2 bits (69), Expect = 0.13
 Identities = 11/19 (57%), Positives = 15/19 (78%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDD D E  +E+D+E
Sbjct: 20  DDDDDDDTDGESSDEDDEE 38



 Score = 27.3 bits (59), Expect = 1.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 94  ELNDDDDDDDDNEEEEEEDDEVRFFS 119
           E +DDDDD D    +E++++E R  S
Sbjct: 19  EDDDDDDDTDGESSDEDDEEEDRNLS 44


>At2g34210 putative transcription elongation factor
          Length = 990

 Score = 40.0 bits (92), Expect = 3e-04
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 16/79 (20%)

Query: 45  GKAAGEKWRSMSDAEKKKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDD 104
           G++  ++ RS SD++ ++                 KK SSG +F+    E++DD +DDDD
Sbjct: 34  GRSGKKRGRSNSDSDGRR---------------GSKKKSSGSAFIDWEVEVDDDVEDDDD 78

Query: 105 NEEEEEEDDEVRFFSF-LC 122
           + + E+   +++F  F LC
Sbjct: 79  DVDVEDGKQQLKFGDFSLC 97



 Score = 26.6 bits (57), Expect = 3.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 93  SELNDDDDDDDDNEEEEEEDDE 114
           S+ +DDD   +D+ E E+ED+E
Sbjct: 2   SQYSDDDYSHEDDSEMEDEDEE 23


>At1g49900 Cys2/His2-type zinc finger protein, putative
          Length = 917

 Score = 40.0 bits (92), Expect = 3e-04
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 79  GKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
           G + S  K   KS S  +DDDDDDDD +E++++DD+
Sbjct: 625 GIEQSKSKPKPKSCSYYDDDDDDDDDGDEDDDDDDD 660


>At2g11910 unknown protein
          Length = 168

 Score = 39.3 bits (90), Expect = 5e-04
 Identities = 15/43 (34%), Positives = 29/43 (66%)

Query: 72  AYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
           A +++++ K+     S ++ N + +D DDDDDD + +E++DDE
Sbjct: 49  AVDQRLSVKEGYKRGSRIEENKDASDSDDDDDDEDADEDDDDE 91



 Score = 37.4 bits (85), Expect = 0.002
 Identities = 14/23 (60%), Positives = 20/23 (86%)

Query: 92  NSELNDDDDDDDDNEEEEEEDDE 114
           + E  D+DD+D+DNE+EEE+DDE
Sbjct: 131 DDEEGDNDDEDEDNEDEEEDDDE 153



 Score = 33.9 bits (76), Expect = 0.020
 Identities = 15/35 (42%), Positives = 23/35 (64%)

Query: 79  GKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDD 113
           G K  S     K  S+ +DDDDD+D +E++++EDD
Sbjct: 59  GYKRGSRIEENKDASDSDDDDDDEDADEDDDDEDD 93



 Score = 31.2 bits (69), Expect = 0.13
 Identities = 12/33 (36%), Positives = 22/33 (66%)

Query: 82  SSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
           +  G S  + + +   D+DD+D++ E+EEEDD+
Sbjct: 120 NGGGGSDDEDDDDEEGDNDDEDEDNEDEEEDDD 152



 Score = 26.6 bits (57), Expect = 3.3
 Identities = 11/43 (25%), Positives = 22/43 (50%)

Query: 67  VKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEE 109
           VK  +    ++   K +S       + + ++DDDD+DD  +E+
Sbjct: 56  VKEGYKRGSRIEENKDASDSDDDDDDEDADEDDDDEDDANDED 98


>At1g02040 hypothetical protein
          Length = 324

 Score = 38.9 bits (89), Expect = 6e-04
 Identities = 18/43 (41%), Positives = 27/43 (61%)

Query: 72  AYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
           A +KKV G  +S  K   +      DDDD+D+D +EEE+E+D+
Sbjct: 170 ASHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDEDEEEDEEDK 212


>At1g69070 hypothetical protein
          Length = 901

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 30/145 (20%), Positives = 66/145 (44%), Gaps = 32/145 (22%)

Query: 1   MARKKAKSDPSKP----KRPQSPFFLFMSDFRVRFR-KENPDNKYVSVVGKAAGEKWRSM 55
           +   +A    +KP    +  + P+ L ++D  +  R + +   K    + +   EK  ++
Sbjct: 231 LVNSEAMESLTKPFVAEENTRDPYLLSLNDMSMEIRARPSERTKTPEEIAQKEREKLEAL 290

Query: 56  SDAEKKKKMEYVKAIHAYNKKVAGKKSSS----------GKSFV---------------- 89
            + E+KK+M+  + +   ++++ G++S+           G SF                 
Sbjct: 291 EE-ERKKRMQETEELSDGDEEIGGEESTKRLTVISGDDLGDSFSVEEDKPKRGWIDDVLE 349

Query: 90  KSNSELNDDDDDDDDNEEEEEEDDE 114
           + ++  N + D+D+D+E EEEEDD+
Sbjct: 350 REDNVDNSESDEDEDSESEEEEDDD 374



 Score = 31.6 bits (70), Expect = 0.10
 Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 80  KKSSSGKSFVKSNSELN---DDDDDDDDNEEEEEEDDEVR 116
           +K    + + +S+ EL    +D+++DDD E+++EED E+R
Sbjct: 385 RKGHHLEDWEQSDDELGAELEDEEEDDDEEDDDEEDAELR 424


>At5g61470 putative protein
          Length = 304

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 15/55 (27%), Positives = 37/55 (67%), Gaps = 3/55 (5%)

Query: 65  EYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDD---DNEEEEEEDDEVR 116
           EY++ + + +  V+ +K    +++++ +S+ N +D DD+   ++E+E+ EDD+V+
Sbjct: 134 EYLQNLKSIDSLVSTRKRKDTENYIEIDSDENHEDSDDEYVVEDEDEDNEDDDVK 188


>At3g07220 unknown protein
          Length = 320

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)

Query: 73  YNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
           Y+   +G  S SGK  V+S  EL + DD+DDD++++EE+D
Sbjct: 140 YHNYQSGPGSGSGKKGVRSR-ELYEYDDEDDDDDDDEEDD 178


>At2g21420 Mutator-like transposase
          Length = 468

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 29  VRFRKENPDNKY-VSVVGKAAGEKWRSMSDAEKKKKMEYVKAIHAYNKK-------VAGK 80
           V ++K NPD  Y V +   A  +KWR     +    +E  +  +    +       V GK
Sbjct: 321 VDYKKLNPDPLYDVKLKSLANKKKWRQC--VQCSNLVELFEGCNHITCRCGFEFCYVCGK 378

Query: 81  KSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
           + +          + +DDDDDDDD+++++++DD+
Sbjct: 379 EWNQRGCLSPGCDDDDDDDDDDDDDDDDDDDDDD 412



 Score = 36.2 bits (82), Expect = 0.004
 Identities = 12/19 (63%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD++++++EDDE
Sbjct: 403 DDDDDDDDDDDDDDDEDDE 421



 Score = 35.4 bits (80), Expect = 0.007
 Identities = 12/18 (66%), Positives = 18/18 (99%)

Query: 96  NDDDDDDDDNEEEEEEDD 113
           +DDDDDDDD+++E++EDD
Sbjct: 406 DDDDDDDDDDDDEDDEDD 423



 Score = 33.9 bits (76), Expect = 0.020
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++++DD+
Sbjct: 397 DDDDDDDDDDDDDDDDDDD 415



 Score = 33.9 bits (76), Expect = 0.020
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++++DD+
Sbjct: 396 DDDDDDDDDDDDDDDDDDD 414



 Score = 33.9 bits (76), Expect = 0.020
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++++DD+
Sbjct: 399 DDDDDDDDDDDDDDDDDDD 417



 Score = 33.9 bits (76), Expect = 0.020
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++++DD+
Sbjct: 398 DDDDDDDDDDDDDDDDDDD 416



 Score = 33.5 bits (75), Expect = 0.027
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD++++E+++D+
Sbjct: 405 DDDDDDDDDDDDDEDDEDD 423



 Score = 33.5 bits (75), Expect = 0.027
 Identities = 10/19 (52%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++E+D++
Sbjct: 404 DDDDDDDDDDDDDDEDDED 422



 Score = 32.3 bits (72), Expect = 0.059
 Identities = 9/19 (47%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD+++++++D++
Sbjct: 401 DDDDDDDDDDDDDDDDDED 419



 Score = 32.3 bits (72), Expect = 0.059
 Identities = 9/19 (47%), Positives = 19/19 (99%)

Query: 96  NDDDDDDDDNEEEEEEDDE 114
           +DDDDDDDD++++++++D+
Sbjct: 402 DDDDDDDDDDDDDDDDEDD 420



 Score = 28.9 bits (63), Expect = 0.66
 Identities = 11/23 (47%), Positives = 19/23 (81%), Gaps = 3/23 (13%)

Query: 96  NDDDDDDDDNEEE---EEEDDEV 115
           +DDDDDD+D+E++   + +DD+V
Sbjct: 411 DDDDDDDEDDEDDGYIDSDDDDV 433



 Score = 25.0 bits (53), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 96  NDDDDDDDDNEEEEEEDDEVRFFSF 120
           +DDDD D D+ ++  E D + F  F
Sbjct: 428 SDDDDVDGDDNDDGSELDGINFEDF 452


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.310    0.128    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,440,144
Number of Sequences: 26719
Number of extensions: 167757
Number of successful extensions: 8308
Number of sequences better than 10.0: 739
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 2345
Number of HSP's gapped (non-prelim): 2995
length of query: 123
length of database: 11,318,596
effective HSP length: 87
effective length of query: 36
effective length of database: 8,994,043
effective search space: 323785548
effective search space used: 323785548
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 53 (25.0 bits)