BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142526.10 + phase: 0
(401 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23860 unknown protein 454 e-128
At3g02260 unknown protein 41 0.001
At4g22140 receptor like protein (fragment) 40 0.002
At4g39100 ES43 like protein 38 0.011
At5g22260 putative protein 37 0.025
At1g66170 hypothetical protein 34 0.12
At3g08020 unknown protein 33 0.28
At3g47990 unknown protein 32 0.62
At2g36250 chloroplast division protein AtFtsZ2-1 (AtFtsZ2-1) 32 0.62
At3g55400 methionyl-tRNA synthetase (AtcpMetRS) 32 0.81
At1g10610 similar to PDR5-like ABC transporter emb|CAA94437 32 0.81
At2g47850 unknown protein 31 1.1
At2g27280 unknown protein 30 1.8
At4g30790 putative protein 30 2.4
At5g66640 putative protein 30 3.1
At5g35210 putative protein 30 3.1
At2g33620 AT-hook DNA-binding protein (AHP1) 30 3.1
At5g07070 serine/threonine protein kinase-like protein 29 4.0
At4g16920 disease resistance RPP5 like protein 29 4.0
At4g18070 unknown protein 29 5.2
>At4g23860 unknown protein
Length = 452
Score = 454 bits (1167), Expect = e-128
Identities = 229/423 (54%), Positives = 285/423 (67%), Gaps = 37/423 (8%)
Query: 14 ADLVLGGDEGRECTYNKGYMKRQAIFSCITCTPDGNAGVCTACSLSCHDGHQIVELWTKR 73
ADLVLGGDEG ECT+ KGYMKRQAIFSCITCTP+GNAG+CTAC LSCHDGH+++ELWTKR
Sbjct: 30 ADLVLGGDEGDECTFPKGYMKRQAIFSCITCTPEGNAGICTACCLSCHDGHELLELWTKR 89
Query: 74 NFRCDCGNSKFGEFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQC 133
NFRCDCGNSKFG CK+ PSKDIEN ENSYNHNFKGLYCTC RPYPDP+ EEQ+EMIQC
Sbjct: 90 NFRCDCGNSKFGTLACKLLPSKDIENSENSYNHNFKGLYCTCDRPYPDPNVEEQVEMIQC 149
Query: 134 CLCEDWFHEEHLGLESSD----EIPRDEEGEPLYEDFMCKACSEVCFFLKLYPEVILVAG 189
CLCEDWFHEEHLGL SD +IPRDEE EP+YEDF+C+ CS C FL LYPE + V
Sbjct: 150 CLCEDWFHEEHLGLTPSDSVGSQIPRDEESEPIYEDFICQNCSPACSFLTLYPENLWVVA 209
Query: 190 K-----QPNATAQ-VSKDKGILEDTP-----STCGFEKPLGDTSYNSPKIDVAQASVGSE 238
K NA ++ + DK ++ P T + +G S + Q G+E
Sbjct: 210 KVDSTGSANACSETIELDKNHMDSEPGQPENGTDAEKSVVGKCSETISDSEPGQPENGTE 269
Query: 239 S-------ISNRAGLPPGGSCNSST---------CTEGASLHVN-----CLLGVNIVAAS 277
+ S + G +ST C+E N C++ ++ +
Sbjct: 270 AEKSVVQKCSEKIDESEAGQPENSTEAEKFVVRKCSEKIDGSENVPAAGCVIRTDL-NSC 328
Query: 278 PVIHGKAMFLSKNWRDALCKCKNCLEYYHQKRIAFLLDKEDSIVEYEKMAKQKREEKLQQ 337
P K +FL+KNWR+ LC+C+ CLE Y Q+++++LLD ED+IVEYEK AK+KR EKL++
Sbjct: 329 PEFEKKPLFLTKNWRNILCRCEKCLEMYKQRKVSYLLDAEDTIVEYEKKAKEKRTEKLEK 388
Query: 338 QEGAELSLFNKLGHVEKVEILKGIEDMKDGLRTFLESADSSKPISAADIHQFFDDIKNKR 397
QEG L L N L HV KVE+L GI+D +DGL+ +ESA SK I++ADI Q F +KNKR
Sbjct: 389 QEGEALDLLNNLDHVSKVELLHGIKDFQDGLQGLMESAGPSKAITSADIEQMFSKLKNKR 448
Query: 398 RRV 400
+R+
Sbjct: 449 KRM 451
>At3g02260 unknown protein
Length = 5079
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 26 CTYNKG---YMKRQAIFSCITCTPDGNAGVCTACSLSCHDGHQIVELWTKRNFRCDCG 80
CT+ +M++ F C TC + G C+ C+ CH GH++V + R F CDCG
Sbjct: 1575 CTFTSSGSNFMEQHWYF-CYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSR-FFCDCG 1630
>At4g22140 receptor like protein (fragment)
Length = 201
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 86 EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHL 145
++YC+ + + ++ + +YC C PY D M+QC C+DW+H +
Sbjct: 93 DYYCRF----EYKAATGAFTPDRVAVYCKCEMPYNPDDL-----MVQCEGCKDWYHPACV 143
Query: 146 GLESSDEIPRDEEGEPLYEDFMCKACS 172
G+ EE + L + F+C CS
Sbjct: 144 GMTI-------EEAKKL-DHFVCAECS 162
>At4g39100 ES43 like protein
Length = 228
Score = 37.7 bits (86), Expect = 0.011
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 86 EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHL 145
+F+C+ + + +++ + ++C C PY D M+QC C +WFH +
Sbjct: 119 DFFCRF----EYNSTTGAFDPDRVTVFCKCEMPYNPDDL-----MVQCEECSEWFHPSCI 169
Query: 146 GLESSDEIPRDEEGEPLYEDFMCKACS 172
G +E +P ++F C+ CS
Sbjct: 170 GTTI------EEAKKP--DNFYCEECS 188
>At5g22260 putative protein
Length = 672
Score = 36.6 bits (83), Expect = 0.025
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 16/75 (21%)
Query: 109 KGLYCTCARPYPDPDAEEQIEMIQCC-LCEDWFHEEHLGLESSDEIPRDEEGEPLYEDFM 167
K + C C EE E + CC +CE W H +G++ ++E+PR F+
Sbjct: 613 KRIECECGA------TEEDGERMVCCDICEVWQHTRCVGVQHNEEVPR---------IFL 657
Query: 168 CKACSEVCFFLKLYP 182
C++C + L P
Sbjct: 658 CQSCDQHLIPLSFLP 672
>At1g66170 hypothetical protein
Length = 653
Score = 34.3 bits (77), Expect = 0.12
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 121 DPDAEEQIEMIQCCLCEDWFHEEHLGLESSDEIPRDEEGEPLYEDFMCKACSEVCFFLKL 180
D D E MI C +CE W H G++ SD +P PL F+C C E F +
Sbjct: 564 DDDGER---MISCDVCEVWQHTRCCGIDDSDTLP------PL---FVCSNCCEE--FAEQ 609
Query: 181 YPEVILVAGKQPNATAQVSKDKGILEDTPSTCGFEKPLG 219
+V+ QP S++ +LE G ++ LG
Sbjct: 610 QRKVL-----QPKYEFPSSENVFLLESADDFFGDQRCLG 643
>At3g08020 unknown protein
Length = 764
Score = 33.1 bits (74), Expect = 0.28
Identities = 20/72 (27%), Positives = 31/72 (42%), Gaps = 7/72 (9%)
Query: 109 KGLYC-TCARPYPDPDAEEQIEMIQCCLCEDWFHEEHLGLESSDEIPRDEEGEPLYEDFM 167
KG YC C + Y D E M+ C +C+ W H G+ + +G+ Y+
Sbjct: 282 KGNYCPVCLKVYRD---SESTPMVCCDICQRWVHCHCDGISDDKYMQFQVDGKLQYK--- 335
Query: 168 CKACSEVCFFLK 179
C C C+ +K
Sbjct: 336 CATCRGECYQVK 347
>At3g47990 unknown protein
Length = 341
Score = 32.0 bits (71), Expect = 0.62
Identities = 19/67 (28%), Positives = 27/67 (39%), Gaps = 7/67 (10%)
Query: 42 ITCTPDGNAGVCTACSLSCHDGHQIVELWTKRNFRCDC------GNSKFGEFYCKIFPSK 95
+ PD + G C C H GH++ L NF +C N K C +FP
Sbjct: 208 LKAVPD-DCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDL 266
Query: 96 DIENVEN 102
D+ + N
Sbjct: 267 DLSALSN 273
>At2g36250 chloroplast division protein AtFtsZ2-1 (AtFtsZ2-1)
Length = 478
Score = 32.0 bits (71), Expect = 0.62
Identities = 18/67 (26%), Positives = 31/67 (45%), Gaps = 3/67 (4%)
Query: 177 FLKLYPEVILVAGKQPNATAQVSKDKGILEDTPSTCGFEKPLGDTSYNSPKIDVAQASVG 236
FL L+PE+ ++ G+ T+ + + P FE+P ++YN +I V G
Sbjct: 73 FLNLHPEISMLRGE---GTSTIVNPRKETSSGPVVEDFEEPSAPSNYNEARIKVIGVGGG 129
Query: 237 SESISNR 243
+ NR
Sbjct: 130 GSNAVNR 136
>At3g55400 methionyl-tRNA synthetase (AtcpMetRS)
Length = 616
Score = 31.6 bits (70), Expect = 0.81
Identities = 16/49 (32%), Positives = 25/49 (50%), Gaps = 9/49 (18%)
Query: 86 EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCC 134
EFY ++F + DI Y +++GLYC Y D E+++ CC
Sbjct: 172 EFYARVFANGDI------YRADYEGLYCVNCEEYKD---EKELLENNCC 211
>At1g10610 similar to PDR5-like ABC transporter emb|CAA94437
Length = 421
Score = 31.6 bits (70), Expect = 0.81
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 123 DAEEQIEMIQCCLCEDWFHEEHLGLESSDE----------IPRDEEGEPLYEDFMCKACS 172
D IE + CC C + ++++ LE+S+E RD+ + C+A S
Sbjct: 34 DPSRFIEWVGCC-CSGCYIDKNIKLENSEEGGTGRKKKASFCRDDHNKHRIRTLACEALS 92
Query: 173 EVCFFLKLYPEV 184
F+ LYP +
Sbjct: 93 RFPLFMPLYPGI 104
>At2g47850 unknown protein
Length = 553
Score = 31.2 bits (69), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 210 STCGFEKPLGDTSYNSPKIDVAQASVGSESISNRAGLPPGGSCNSST 256
STC F+ P+G YN +A A V +S+ G +SST
Sbjct: 439 STCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSST 485
>At2g27280 unknown protein
Length = 764
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 31/53 (57%), Gaps = 3/53 (5%)
Query: 292 RDALCKCKNCLEYYHQ--KRIAFLLDKEDSIVEYEKMAKQKREEKLQQQEGAE 342
RD + K K+ ++Y K +AF +E E EK+ +Q++ EKL++Q AE
Sbjct: 165 RDDVTKKKDLSDFYFNIGKNVAFGA-REVEAKEAEKLEEQRKAEKLEEQRKAE 216
>At4g30790 putative protein
Length = 1148
Score = 30.0 bits (66), Expect = 2.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 279 VIHGKAMFLSKNWRDALCKCKNCLEYYHQKRIAFLLDKE--DSIVEYEKMAKQKREEKLQ 336
V+ K FLSK+ + L KC+N Q R KE ++ ++ KQ +EK+
Sbjct: 953 VLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLGKQANKEKIS 1012
Query: 337 --QQEGAELSLF--NKLGHVEKV 355
+ E E++ F N+ GH E +
Sbjct: 1013 FGRLEVHEIAAFVLNQAGHYEAI 1035
>At5g66640 putative protein
Length = 451
Score = 29.6 bits (65), Expect = 3.1
Identities = 23/86 (26%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 56 CSLSCHDGHQIVELWTKRNFRCDCGNSKFGEFYCKIFPSK---DIENVENSYNHNF-KGL 111
C CH + E+ K F DC + C + K + E + H F K
Sbjct: 99 CCFHCHRPFVMHEILKKGKFHIDCYKEYYRNRNCYVCQQKIPVNAEGIRKFSEHPFWKEK 158
Query: 112 YCTCARPYPDPDAEEQIEMIQCCLCE 137
YC P D D +CC CE
Sbjct: 159 YC----PIHDEDG-----TAKCCSCE 175
>At5g35210 putative protein
Length = 1606
Score = 29.6 bits (65), Expect = 3.1
Identities = 29/110 (26%), Positives = 43/110 (38%), Gaps = 22/110 (20%)
Query: 45 TPDGNAGVCTACSLSCHDGHQIVELWTKRNFRCDCGNSKFGEFYCKIFPSKDIENVENSY 104
TPD + +LSC +W K+N D G F +++I S
Sbjct: 1057 TPDSSVSKSKQKTLSCG------VIWRKKNVE-DTGVD---------FRNQNILLAGRSD 1100
Query: 105 NHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHLGLESSDEIP 154
+ + + C PY + I C CE WFH E + L+ S +IP
Sbjct: 1101 KPSLEPVCGICLLPY-----NPGLTYIHCTKCEKWFHTEAVKLKDS-QIP 1144
>At2g33620 AT-hook DNA-binding protein (AHP1)
Length = 351
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/72 (27%), Positives = 28/72 (38%)
Query: 225 SPKIDVAQASVGSESISNRAGLPPGGSCNSSTCTEGASLHVNCLLGVNIVAASPVIHGKA 284
+P V+Q S G + + G PPG S S + V V A + K
Sbjct: 121 APSFTVSQPSSGGDGGEKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKI 180
Query: 285 MFLSKNWRDALC 296
M L+ N A+C
Sbjct: 181 MALTHNGPRAVC 192
>At5g07070 serine/threonine protein kinase-like protein
Length = 456
Score = 29.3 bits (64), Expect = 4.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 282 GKAMFLSKNW-----RDALCKCKNCLEYYHQKRIAFLLDKEDSIVEYEKMAKQKREEKLQ 336
GKA F +W + LCK L+ H+ RI KE S KQK+ EK++
Sbjct: 225 GKADFKCPSWFAPEVKRLLCKM---LDPNHETRITIAKIKESSWFRKGLHLKQKKMEKME 281
Query: 337 QQEGAE 342
+Q+ E
Sbjct: 282 KQQVRE 287
>At4g16920 disease resistance RPP5 like protein
Length = 1304
Score = 29.3 bits (64), Expect = 4.0
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 266 NCLLGVNIVAASPVIHGKAMFLSKNWR------DALCKCKNCLEYYHQKRIAFLLDKEDS 319
+C++ +++A + SKN+ + L + NC +Y+ QK I D + S
Sbjct: 48 SCIIADALISAIREARISIVIFSKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPS 107
Query: 320 -----IVEYEKMAKQKREEKLQQQEGAELSLFNKLGHVEKVEILKGIED 363
I E+ K+ K+ E+K Q+ + + ++ ++ G D
Sbjct: 108 HVRKQIGEFGKVFKKTCEDKPADQKQRWVKALTDISNIAGEDLRNGPND 156
>At4g18070 unknown protein
Length = 262
Score = 28.9 bits (63), Expect = 5.2
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 325 KMAKQKREEKLQQQEGAELSLFNKLGHVEKVEILKGIEDMKDGLRTFLESADSS 378
K AK+K+EE+ QQQ + L H + + G ++ DG+ +E DSS
Sbjct: 9 KAAKKKQEEEQQQQGSSTLINLKSNNHDSRSQ---GDKESDDGVNERIEITDSS 59
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,126,073
Number of Sequences: 26719
Number of extensions: 471515
Number of successful extensions: 1432
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1415
Number of HSP's gapped (non-prelim): 35
length of query: 401
length of database: 11,318,596
effective HSP length: 101
effective length of query: 300
effective length of database: 8,619,977
effective search space: 2585993100
effective search space used: 2585993100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC142526.10