BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141863.3 - phase: 0
(773 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g35590 CACTA-element, putative 551 e-157
At3g30790 hypothetical protein 521 e-148
At3g30680 hypothetical protein 515 e-146
At3g32230 hypothetical protein 469 e-132
At2g13010 pseudogene 427 e-120
At4g03900 putative transposon protein 414 e-115
At5g59640 serine/threonine-specific protein kinase - like 344 9e-95
At1g36470 hypothetical protein 315 5e-86
At2g12210 putative TNP2-like transposon protein 314 1e-85
At2g10010 putative TNP2-like transposon protein 267 2e-71
At4g08000 putative transposon protein 266 2e-71
At3g31920 hypothetical protein 244 2e-64
At4g03730 putative transposon protein 231 9e-61
At4g08070 231 1e-60
At2g10140 putative protein 189 4e-48
At2g15070 En/Spm-like transposon protein 176 4e-44
At1g31560 putative protein 170 2e-42
At4g07750 putative transposon protein 169 4e-42
At1g35280 hypothetical protein 166 5e-41
At1g34660 hypothetical protein 165 8e-41
>At1g35590 CACTA-element, putative
Length = 1180
Score = 551 bits (1420), Expect = e-157
Identities = 323/799 (40%), Positives = 435/799 (54%), Gaps = 59/799 (7%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + GP++P+A +DVFLQPLI++LK LW G Y++S QNF L+A L
Sbjct: 391 MCMNTEYLFLTILNYGPNHPRASLDVFLQPLIEELKELWCTGVDAYEVSLSQNFNLKAVL 450
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAY MLSGW+THG+ +CP CME+TK+F L G K+ WFDCHR FLPH HP RR
Sbjct: 451 LWTISDFPAYNMLSGWTTHGKLSCPVCMESTKSFYLPIGRKTCWFDCHRRFLPHGHPSRR 510
Query: 120 LKNGFKKD-ERVFVGPPPKITSEEVW---TRVCDYPKVTDY---GRAVPIPRYGVDHHWT 172
K F K + PP +T E+V+ + PK D G + YG +H+W
Sbjct: 511 NKKDFLKGRDASSEYPPESLTGEQVYYERLASVNPPKTKDVGGNGHEKKMRGYGKEHNWH 570
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K SI W+L YWKD LRHN+DVMH EKN DNI NT++ VKGK+KDN +R D++ YC R
Sbjct: 571 KESILWELSYWKDLNLRHNIDVMHTEKNFLDNIMNTLLGVKGKSKDNIMSRLDIEKYCSR 630
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWLK-DLRMPDGYSSNIGRCADVNTGRLH 291
L + GK P Y L+ Q + + Q +K D+R PDGYSS++ C D+ G+
Sbjct: 631 PGLHI--DSTGK--APFPPYTLTEQAKQSLFQCVKHDVRFPDGYSSDLASCVDLENGKFS 686
Query: 292 GMKSHDSHIFMENFIPIAFSSLPKH------------------------VLDPLIEISQF 327
GMKSHD HIFME +P F+ L ++ I F
Sbjct: 687 GMKSHDCHIFMERLLPFIFAELLDRNVHLALSGTILTIFYGEIFLCNYLTSTYILGIGAF 746
Query: 328 FKNLCASTLRVDELEKMEKNMPIIICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYR 387
F++LC+ TL+ ++ +++N+ +IIC LE+IFPP FFD MEHLP+H YEA LGGPVQYR
Sbjct: 747 FRDLCSRTLQTSRVQILKQNIVLIICNLEKIFPPSFFDVMEHLPIHRPYEAELGGPVQYR 806
Query: 388 WMYPFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLTPSN-TR-NEVQ 445
WMYPFERF K KN SIV Y E YF HYF D + T S TR +E +
Sbjct: 807 WMYPFERFFKKLKGKAKNKRYAASSIVKSYINDEIAYFSEHYFTDHIQTKSRLTRFDEGE 866
Query: 446 VNDLRDPSTLSVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYA 505
V+ P ++F GR +G + W+ +K+ ++AH +VL N + + YL A Y
Sbjct: 867 VHVYHVPGVPNIFMQVGRPSGAMHVEWL-SEKDYQNAHAYVLRNYSMFEDYLS---AKYP 922
Query: 506 EFGEGSTVGSIHEYFPAWFKQRV-YNAEPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKF 564
E E + W K+ V Y + ++++ QGPL + YF GY F
Sbjct: 923 SLSEKELYVRRAEEYHLWVKEYVTYWNTNSPFPTWVQEIVQGPLNKVKTWPMYFTRGYLF 982
Query: 565 HTHSWTEGKKTINSGVYVKG---VTDGGEDDFYGVIKHIYELSYN---DNKVVLFYCDWF 618
HT + G+KT N GV VKG E DFYG + + EL Y + ++ LF C W+
Sbjct: 983 HTQTHGAGRKTCNYGVCVKGENYADSSDEADFYGTLTDVIELEYEGIVNLRITLFKCKWY 1042
Query: 619 DPS-PRWTKINKLCNTVDIRVDKKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGWSVAIK 677
DP R T+ N VD+ +KY +Y+PFI+A QV Y+PYP T K W +K
Sbjct: 1043 DPKIGRGTRRNH-GGVVDVLSTRKYNKYEPFILASQADQVCYIPYPYTKKPKNIWLSVLK 1101
Query: 678 TKPRGRIETE-ERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSI------L 730
PRG I + E + Q +D V + D V + V +D I
Sbjct: 1102 VNPRGNISGQYENTDPTLLQTEDDEPVLQTTIEDLVIDYPVGDVTPIILDYDIGDAEPED 1161
Query: 731 EMRNEVEDENEDVVDDNNE 749
E R + +ED ++D NE
Sbjct: 1162 EFRCNLSSSDEDEIEDENE 1180
>At3g30790 hypothetical protein
Length = 953
Score = 521 bits (1343), Expect = e-148
Identities = 291/698 (41%), Positives = 403/698 (57%), Gaps = 56/698 (8%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
M M +LFLS +VPGP +PK +DVFLQPLI +LK+LW G T+D S KQNF +RA L
Sbjct: 291 MYMQSEFLFLSILVPGPKHPKRALDVFLQPLIHELKKLWYEGVHTFDYSSKQNFNMRAVL 350
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
MWTI+DFPAYGMLSGW+THGR +CP+CM T AF L+ G K WFD HR FLP +HP+RR
Sbjct: 351 MWTISDFPAYGMLSGWTTHGRLSCPYCMGRTDAFQLKKGRKPCWFDYHRRFLPLHHPYRR 410
Query: 120 LKNGFKKDERVFVGPPPKITSEEVWTRVCDYPKVTDYGRA------VPIP-RYGVDHHWT 172
K F+K++ V + PP ++ +++ ++ Y R +P YG H+W
Sbjct: 411 NKKLFRKNKIVRLPPPSYVSGTDLFKQIDYYGAQETCKRGGNWLTTANMPDEYGSTHNWH 470
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K+SIFW LPYWKD LRH LDVMHIEKN FDNI NT+++V+GKTKD+ K+R DL+ C R
Sbjct: 471 KQSIFWQLPYWKDLFLRHCLDVMHIEKNFFDNIMNTLLNVQGKTKDSLKSRLDLEEICSR 530
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWL-KDLRMPDGYSSNIGRCADVNTGRLH 291
+L + +GKL P + + LS + K + +W+ +++ PDGY S RC + +
Sbjct: 531 PELHVTR--DGKL--PVSKFRLSNEAKKALFEWVVAEVKFPDGYVSKFSRCVEQGQ-KFS 585
Query: 292 GMKSHDSHIFMENFIP-IAFSSLPKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPI 350
GMKSHD H+FM+ +P + LP ++ + + I FFK+LC TL +E+++KN+P+
Sbjct: 586 GMKSHDCHVFMQRLLPFVLVELLPTNIHEAIAGIGVFFKDLCTRTLTTYTIEQLDKNIPV 645
Query: 351 IICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVE 410
++C LE++F P FFD MEHLP+HL +E LGGPVQ+RWMY FE+FM K KNLA+VE
Sbjct: 646 LLCNLEKLFLPVFFDVMEHLPIHLLHEVALGGPVQFRWMYLFEQFMKSLKGKAKNLARVE 705
Query: 411 GSIVAIYTAKETTYFIGHYFVDRLLTPSNTRNEVQVNDLRD----PSTLSVFNLDGRHAG 466
GSIVA +ET++F +YF + T + P F GR AG
Sbjct: 706 GSIVAGSLTEETSHFTSYYFSPSVRTKKTRPRRYDDGGVAPTYNVPDVTDTFAQIGRLAG 765
Query: 467 KVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYAEFGEGSTVGSIHEYFPAWFKQ 526
K+ + W+ D + E P LEE Y + + F W K
Sbjct: 766 KLKEVWLFDSQ------------IREACPELEE--KEYETYKDRD--------FAGWLKY 803
Query: 527 RVYNA---EPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKFHTHSWTEGKKTINSGVYVK 583
V N EP + L +L Q P YF GY FHT+ + + T N G++V+
Sbjct: 804 YVTNGCGNEPLQ--LWLHELVQEPRSKITTASMYFTRGYTFHTYPYGSRRATANYGIHVE 861
Query: 584 GVTDGGEDDFYGVIKHIYELSYN---DNKVVLFYCDWFDP-SPRWTKINKLCNTVDIRVD 639
GE +FYG+I+ I E+ Y + K V+F CDWFDP R + N L VD+ +
Sbjct: 862 -----GETEFYGIIQQILEVEYPGLLNLKCVIFKCDWFDPVIDRGVRKNNL-GVVDVNAN 915
Query: 640 KKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGWSVAIK 677
K Y +++PFI+A RQV ++ YP ++ W +K
Sbjct: 916 KTYSKFEPFILASQARQVSFLSYPRVRSQREVWLSLLK 953
>At3g30680 hypothetical protein
Length = 1116
Score = 515 bits (1326), Expect = e-146
Identities = 310/779 (39%), Positives = 414/779 (52%), Gaps = 83/779 (10%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + GP++P+A +DVFLQPLI++LK LW G YD+S QNF L+A L
Sbjct: 391 MCMNTEYLFLTILNSGPNHPRASLDVFLQPLIEELKELWCTGVDAYDVSLSQNFNLKAVL 450
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAY MLSGW+THG+ +CP CME+TK+F L +G K+ WFDCHR FLPH HP RR
Sbjct: 451 LWTISDFPAYSMLSGWTTHGKLSCPVCMESTKSFYLPNGRKTCWFDCHRRFLPHGHPSRR 510
Query: 120 LKNGFKKDERVFVG-PPPKITSEEVWTR---VCDYPKVTDYG---RAVPIPRYGVDHHWT 172
K F K PP +T E+V+ + PK D G + YG +H+W
Sbjct: 511 NKKDFLKGRDASSEYPPESLTGEQVYYERLASVNPPKTKDVGGNGHEKKMRGYGKEHNWH 570
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K SI W+L YWKD LRHN+DVMH EKN DNI NT++ VKGK+KDN +R D++
Sbjct: 571 KESILWELSYWKDLNLRHNIDVMHTEKNFLDNIMNTLLGVKGKSKDNIMSRLDIE----- 625
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGRLHG 292
Y S G D G
Sbjct: 626 -----------------------------------------KYCSRPGLHIDST-----G 639
Query: 293 MKSHDSHIFMENFIPIAFSSL-PKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPII 351
MKSHD H+FME +P F+ L ++V L I FF++LC+ TL+ ++ +++N+ +I
Sbjct: 640 MKSHDCHVFMERLLPFIFAELLDRNVHLALSGIGAFFRDLCSRTLQTSRVQILKQNIVLI 699
Query: 352 ICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVEG 411
IC LE+IFPP FFD MEHLP+HL YEA LGGPVQYRWMYPFERF K KN G
Sbjct: 700 ICNLEKIFPPSFFDVMEHLPIHLPYEAELGGPVQYRWMYPFERFFKKLKGKAKNKRYAAG 759
Query: 412 SIVAIYTAKETTYFIGHYFVDRLLTPSN-TR-NEVQVNDLRDPSTLSVFNLDGRHAGKVL 469
SIV Y E YF HYF D + T S TR NE +V P ++F GR +G +
Sbjct: 760 SIVESYINDEIAYFSEHYFADHIQTKSRLTRFNEGEVPVYHVPGVPNIFMQVGRPSGAMH 819
Query: 470 QYWMVDQKEMRSAHVHVLINCAEVKPY---LEEFI-AFYAEFGEGSTVGSIHEYFPAWFK 525
W+ +K+ ++AH +VL NC KP+ E+++ A Y E E + W K
Sbjct: 820 VDWL-SEKDYQNAHAYVLRNCDYFKPFESMFEDYLSAKYPSLSEKELYVRRAEEYHLWVK 878
Query: 526 QRV-YNAEPTDEVIRLRQLSQGPLQCANEFHTYFVNGYKFHTHSWTEGKKTINSGVYVKG 584
+ V Y + ++++ QGPL + YF GY FHT + G+KT N GV VKG
Sbjct: 879 EYVTYWNTNSPFPTWVQEIVQGPLNKVKTWPMYFTRGYLFHTQTHGAGRKTCNYGVCVKG 938
Query: 585 ---VTDGGEDDFYGVIKHIYELSYN---DNKVVLFYCDWFDPS-PRWTKINKLCNTVDIR 637
E DFYG + + EL Y + ++ LF C W+DP R T+ N VD+
Sbjct: 939 ENYADSSDEADFYGTLTDVIELEYEGIVNLRITLFKCKWYDPKIGRGTRRNH-GGVVDVL 997
Query: 638 VDKKYKEYDPFIMAHNVRQVYYVPYPPTLPRKRGWSVAIKTKPRGRIETE-ERNEEVAYQ 696
+KY +Y+PFI+A QV Y+PYP T K W +K PRG I + E + Q
Sbjct: 998 STRKYNKYEPFILASQADQVCYIPYPYTKKPKNIWLSVLKVNPRGNISGQYENTDPTLLQ 1057
Query: 697 ADDMTHVNEIIEVDQVTSWQDSQVEGDQVDPSI------LEMRNEVEDENEDVVDDNNE 749
+D V + D V + + V +D I E R + +ED ++D +E
Sbjct: 1058 TEDDEAVLQTTIEDLVIDYPVADVTLIILDYDIGDAEPEDEFRCNLSSSDEDEIEDEDE 1116
>At3g32230 hypothetical protein
Length = 1169
Score = 469 bits (1206), Expect = e-132
Identities = 286/773 (36%), Positives = 404/773 (51%), Gaps = 81/773 (10%)
Query: 16 GPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAALMWTINDFPAYGMLSG 74
GP +PK +DVFLQPLI +LK LW G T+D S KQNF +RA LMWTI+DFPAYGMLSG
Sbjct: 456 GPKHPKRALDVFLQPLIHELKNLWYEGVQTFDYSSKQNFNMRAMLMWTISDFPAYGMLSG 515
Query: 75 WSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRRLKNGFKKDERVFVGP 134
W+THGR +CP+CM+ T AF L+ G KS +L N F + + G
Sbjct: 516 WTTHGRLSCPYCMDRTDAFQLKHGRKSFVRLPPPVYLSGNDLFENID---------YYGS 566
Query: 135 PPKITSEEVWTRVCDYPKVTDYGRAVPIPRYGVDHHWTKRSIFWDLPYWKDNLLRHNLDV 194
W + P YG H+W K+SIFW LPYWKD LLRHNLD
Sbjct: 567 QETCKRGGNWHTPANMPD-----------GYGSAHNWHKQSIFWQLPYWKDLLLRHNLD- 614
Query: 195 MHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLELKPQPNGKLLKPKANYNL 254
GKTKD+ K+R DL C R DL + +GKL PK + L
Sbjct: 615 -------------------GKTKDSMKSRLDLAEICNRPDLHITR--DGKLPVPK--FRL 651
Query: 255 SAQEAKLVCQWLK-DLRMPDGYSSNIGRCADVNTGRLHGMKSHDSHIFMENFIPIAFSSL 313
+ + K + +W+K +++ PDGY S RC + + GMKSHD H+F++ +P F L
Sbjct: 652 TTEGKKALFEWVKAEVKFPDGYLSKFSRCVEQGQ-KFSGMKSHDCHVFIQRLLPFVFLEL 710
Query: 314 -PKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPIIICQLEQIFPPGFFDSMEHLPV 372
P +V D + FF++LC TL D ++++++N+P+++C LE++FPP FFD MEHL +
Sbjct: 711 LPANVHDAIE--GAFFRDLCTRTLTTDGIQQLDENIPMLLCNLEKVFPPTFFDVMEHLSI 768
Query: 373 HLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVD 432
HL +EA LGGPVQ+RWMYPFERFM K KNLA+VEGSIVA +ETT+F +YF
Sbjct: 769 HLPHEAALGGPVQFRWMYPFERFMKTLKGKAKNLARVEGSIVAGSLTEETTHFTSYYFSP 828
Query: 433 RLLT----PSNTRNEVQVNDLRDPSTLSVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLI 488
+ T P + P +F+ GR AGK+ + W D +R+AH ++L
Sbjct: 829 TVRTKKTRPRRYDDGGVAPSYNVPDVPDIFSQIGRLAGKLKEVWWEDHTYLRAAHNYILR 888
Query: 489 NCAEVKP----YLEEFIAFYAEFGEGSTVGSIHEYFPAWFKQRVYNAEPTDEV-IRLRQL 543
N ++P + + Y + E F W K V N + + + L +L
Sbjct: 889 NLDYIQPLERIFDTQIREAYPDLEEKDYETYKDRDFAGWLKYYVENGCGNEPLPLWLHEL 948
Query: 544 SQGPLQCANEFHTYFVNGYKFHTHSWTEGKKTINSGVYVKGVTDGGEDDFYGVIKHIYEL 603
Q P YF GY FHT+S + T N G+YV G+ DFYGV++ I E+
Sbjct: 949 VQEPRGKITTAPMYFTPGYTFHTYSHGSRRATTNYGIYV----PSGDSDFYGVLQQIIEV 1004
Query: 604 SYN---DNKVVLFYCDWFDPSP-RWTKINKLCNTVDIRVDKKYKEYDPFIMAHNVRQVYY 659
Y + K +LF CDW+DP R ++N L VD+ +++Y +++P+++A QV +
Sbjct: 1005 EYPGLLNLKCILFKCDWYDPIIWRGVRVNNL-GVVDVNANRRYGKFEPYVLASQAEQVSF 1063
Query: 660 VPYPPTLPRKRGWSVAIKTKPRGRIETEERNEEVAYQADDMTHVNEIIEVDQVTSWQDSQ 719
+PYP R+ W +K PRGRI + DD+ E V +V S
Sbjct: 1064 LPYPHLRVRREIWLSVVKFNPRGRI---------IWVVDDLVMQQE--RVGEVFIPNIST 1112
Query: 720 VEGDQVDPS--ILEMRNEVEDENEDVVDDNNEGDHQDNQVDDGDVDEYNYASD 770
+ +DP LE +V DE ++ + D +D+ D + DE ++ D
Sbjct: 1113 EDVSHIDPQNRQLEQVQDVSDEEVEINEFEESDDGEDSNDGDSNEDENSHEED 1165
>At2g13010 pseudogene
Length = 1040
Score = 427 bits (1099), Expect = e-120
Identities = 227/524 (43%), Positives = 320/524 (60%), Gaps = 44/524 (8%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
MCM ++FLS +VPGP +PK +DVFLQPLI +LK+LW G T+D S KQNF +RA L
Sbjct: 541 MCMQSEFMFLSILVPGPKHPKRALDVFLQPLIHELKKLWYEGVHTFDYSSKQNFNMRAML 600
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
MWTI+DFPAY MLSGW+ HGR P K WF+CHR FLP +HP+RR
Sbjct: 601 MWTISDFPAYRMLSGWTMHGRLYVP-----------TKDRKPCWFNCHRRFLPLHHPYRR 649
Query: 120 LKNGFKKDERVFVGPPPKITSEEVWTRVCDY------PKVTDYGRAVPIP-RYGVDHHWT 172
K F+K++ V + PP ++ +++ ++ Y + ++ +P YG H+W
Sbjct: 650 NKKLFRKNKIVRLLPPSYVSGTDLFEQIDYYGAQETCKRGGNWHTTANMPDEYGSTHNWY 709
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K+SIFW LPYWKD LLRHNL VMHIEKN FDNI NT+++++GKTKD K+R DL C +
Sbjct: 710 KQSIFWQLPYWKDLLLRHNLYVMHIEKNFFDNIMNTLLNLQGKTKDTLKSRLDLAEICSK 769
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWL-KDLRMPDGYSSNIGRCADVNTGRLH 291
+L + +GKL P + + LS + K + +W+ +++ PDGY S RC + +
Sbjct: 770 PELHVTR--DGKL--PVSKFRLSNEAKKALFEWVVAEVKFPDGYVSKFSRCVEQGQ-KFS 824
Query: 292 GMKSHDSHIFMENFIP-IAFSSLPKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPI 350
GMKSHD H+FM+ +P + LP ++ + + I FFK+LC TL D +E+++KN+P+
Sbjct: 825 GMKSHDCHVFMQRLLPFVLVELLPTNIHEAIAGIGVFFKDLCTRTLTTDTIEQLDKNIPV 884
Query: 351 IICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVE 410
++C LE++F P FFD MEHLP+HL +E LGGPVQ+RWMYPFERFM K KNLA+VE
Sbjct: 885 LLCNLEKLFSPAFFDVMEHLPIHLPHEVALGGPVQFRWMYPFERFMKSLKGKAKNLARVE 944
Query: 411 GSIVAIYTAKETTYFIGHYFVDRLLTPSNTRNEVQVNDLRDPSTLSVFNLD--------- 461
GSIVA +ET++F +YF +PS + + D +N+
Sbjct: 945 GSIVAGSLTEETSHFTSYYF-----SPSVRTKKTRPRCYDDGGVAPTYNVPDVPDTFAQI 999
Query: 462 GRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYA 505
GR AGK+ + W D R+AH ++L N Y+++F + A
Sbjct: 1000 GRLAGKLKEVWWDDHTLSRAAHNYILRNV----DYIQKFERYKA 1039
>At4g03900 putative transposon protein
Length = 817
Score = 414 bits (1064), Expect = e-115
Identities = 217/448 (48%), Positives = 277/448 (61%), Gaps = 32/448 (7%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + GP++P+A +DVFLQPLI++LK LW G YD+S QNF L+A L
Sbjct: 391 MCMNTEYLFLTILNSGPNHPRASLDVFLQPLIEELKELWCTGVDAYDVSLSQNFNLKAVL 450
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAY MLSGW+THG+ +CP CME+TK+F L +G K+ WFDCHR FLPH HP RR
Sbjct: 451 LWTISDFPAYSMLSGWTTHGKLSCPVCMESTKSFYLPNGRKTCWFDCHRRFLPHGHPSRR 510
Query: 120 LKNGFKKDERVFVG-PPPKITSEEVWTR---VCDYPKVTDYG---RAVPIPRYGVDHHWT 172
K F K PP +T E+V+ + PK D G + YG +H+W
Sbjct: 511 NKKDFLKGRDASSEYPPESLTGEQVYYERLASVNPPKTKDVGGNGHEKKMRGYGKEHNWH 570
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K SI W+L YWKD LRHN+DVMH EKN DNI NT++ VKGK+KDN +R D++ YC R
Sbjct: 571 KESILWELSYWKDLNLRHNIDVMHTEKNFLDNIMNTLLGVKGKSKDNIMSRLDIEKYCSR 630
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWLK-DLRMPDGYSSNIGRCADVNTGRLH 291
L + GK P Y L+ + + + Q +K D+R PDG
Sbjct: 631 PGLHI--DSTGKA--PFPPYKLTEEAKQSLFQCVKHDVRFPDG----------------- 669
Query: 292 GMKSHDSHIFMENFIPIAFSSL-PKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPI 350
MKSHD H+FME +P F+ L ++V L I FF++LC+ TL+ ++ +++N+ +
Sbjct: 670 -MKSHDCHVFMERLLPFIFAELLDRNVHLALSGIRAFFRDLCSRTLQTSRVQILKQNIVL 728
Query: 351 IICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVE 410
IIC LE+IFPP FFD MEHLP+HL YEA LGGPVQYRWMYPFERF K KN
Sbjct: 729 IICNLEKIFPPSFFDVMEHLPIHLPYEAELGGPVQYRWMYPFERFFKKLKGKAKNKRYAA 788
Query: 411 GSIVAIYTAKETTYFIGHYFVDRLLTPS 438
GSIV Y E YF HYF D + T S
Sbjct: 789 GSIVESYINDEIAYFSEHYFADHIQTKS 816
>At5g59640 serine/threonine-specific protein kinase - like
Length = 986
Score = 344 bits (883), Expect = 9e-95
Identities = 173/325 (53%), Positives = 220/325 (67%), Gaps = 8/325 (2%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
MCM + ++FL+ +VPGP++PK +D+FLQPLI++LK LWV G YDIS KQNF L+ L
Sbjct: 277 MCMKQEFMFLTILVPGPNHPKRSLDIFLQPLIEELKDLWVNGVEAYDISTKQNFLLKVVL 336
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
MWTI+DFPAYGMLSGW+THGR ACP+C + T AF L++G K+ WFDCHR FLP NH +R
Sbjct: 337 MWTISDFPAYGMLSGWTTHGRLACPYCSDQTGAFWLKNGRKTCWFDCHRCFLPVNHSYRG 396
Query: 120 LKNGFKKDERVFVGPPPKITSEEVWTRVCDYPKVTDY-GRAVPIPRYGVDHHWTKRSIFW 178
K FKK + V P +T EE++ VC PK D G + YG H+W K+SI W
Sbjct: 397 NKKDFKKGKVVEDSKPEILTGEELYNEVCCLPKTVDCGGNHGRLEGYGKTHNWHKQSILW 456
Query: 179 DLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLELK 238
+L YWKD LRHNLDVMHIEKNV DN T+++V+GKTKDN K+R DLQ C RKDL L
Sbjct: 457 ELSYWKDLKLRHNLDVMHIEKNVLDNFIKTLLNVQGKTKDNIKSRLDLQENCNRKDLHLT 516
Query: 239 PQPNGKLLKPKANYNLSAQEAKLVCQWL-KDLRMPDGYSSNIGRCADVNTGRLHGMKSHD 297
P+ GK PK + L ++ +WL KD++ DGYSS++ C D+ +L GMKSHD
Sbjct: 517 PE--GKAPIPK--FRLKPDAKEIFLRWLEKDVKFSDGYSSSLANCVDLPGRKLTGMKSHD 572
Query: 298 SHIFMENFIPIAFSSL-PKHVLDPL 321
H+ M+ PIAF+ L K V D L
Sbjct: 573 CHVLMQRLFPIAFAELMDKSVHDAL 597
Score = 112 bits (279), Expect = 1e-24
Identities = 71/212 (33%), Positives = 107/212 (49%), Gaps = 14/212 (6%)
Query: 457 VFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLEEFIAFYAEFGEGSTVGSI 516
+F+ GR +GK + W+ D K+ AH ++L NC +++P+ F G + +
Sbjct: 620 IFSQAGRDSGKESEIWLQD-KDYHIAHRYILRNCDQLRPFERLFDESLIAANPGISEKDL 678
Query: 517 HEY----FPAWFKQRVYNAEPTDEVIR-LRQLSQGPLQCANEFHTYFVNGYKFHTHSWTE 571
+E + +W K+ V + + L + GP+ + YF GY FHT+ +
Sbjct: 679 NELREKQYSSWLKKYVEDTWKDNSYPEWLLSIVHGPMVKVTCWPMYFCRGYIFHTYDHGK 738
Query: 572 GKKTINSGVYVKGVTDGG---EDDFYGVIKHIYELSYN---DNKVVLFYCDWFDPS-PRW 624
KK N GV VKG T E DFYG+++ IYEL Y D KVV+F CDW+D R
Sbjct: 739 NKKNANYGVCVKGTTSSSSNEEADFYGILREIYELHYPGHVDLKVVVFKCDWYDSKVGRG 798
Query: 625 TKINKLCNTVDIRVDKKYKEYDPFIMAHNVRQ 656
+ NK +DI + Y+EYDPF++A Q
Sbjct: 799 IRRNK-SGIIDINAKRHYEEYDPFVLASQADQ 829
>At1g36470 hypothetical protein
Length = 753
Score = 315 bits (808), Expect = 5e-86
Identities = 163/358 (45%), Positives = 219/358 (60%), Gaps = 22/358 (6%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + GP++P+A +DVFLQPLI++LK W G YD+S QNF L+A L
Sbjct: 223 MCMNTEYLFLTILNSGPNHPRASLDVFLQPLIEELKEFWSTGVDAYDVSLSQNFNLKAVL 282
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAY ML GW+THG+ +CP CME+TK+F L +G K+ WFDCHR FLPH HP RR
Sbjct: 283 LWTISDFPAYNMLLGWTTHGKLSCPVCMESTKSFYLPNGRKTCWFDCHRRFLPHGHPSRR 342
Query: 120 LKNGFKKD-ERVFVGPPPKITSEEVW---TRVCDYPKVTDY---GRAVPIPRYGVDHHWT 172
+ F K + PP +T E+V+ + PK D G + YG +H+W
Sbjct: 343 NRKDFLKGRDASSEYPPESLTGEQVYYERLASVNPPKTKDVGGNGHEKKMRGYGKEHNWH 402
Query: 173 KRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKR 232
K SI W+L YWKD LRHN+DVMH EKN DNI NT+M VKGK+KDN +R D++ +C R
Sbjct: 403 KESILWELSYWKDLNLRHNIDVMHTEKNFLDNIMNTLMRVKGKSKDNIMSRLDIEKFCSR 462
Query: 233 KDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWLK-DLRMPDGYSSNIGRCADVNTGRLH 291
L + +GK P Y L+ + + + Q +K D+R PDGYSS++ C D++ G+
Sbjct: 463 PGLHI--DSSGK--APFPAYTLTEEAKQSLLQCVKYDIRFPDGYSSDLASCVDLDNGKFS 518
Query: 292 GMKSHDSHIFMENFIPIAFS---------SLPKHVLDPLIEISQFFKNLCASTLRVDE 340
GMKSHD H+FME +P F+ +L ++L+ IS CA T E
Sbjct: 519 GMKSHDCHVFMERLLPFIFAELLDRNVHLALSGNILEHYFSISYLGSRDCARTFEQGE 576
Score = 79.7 bits (195), Expect = 6e-15
Identities = 52/169 (30%), Positives = 78/169 (45%), Gaps = 10/169 (5%)
Query: 590 EDDFYGVIKHIYELSYN---DNKVVLFYCDWFDPSPRWTKINKLCNTVDIRVDKKYKEYD 646
E DFYG + I EL Y + ++ LF C W+DP VDI +KY +Y+
Sbjct: 584 EADFYGTLTDIIELEYEGIVNLRITLFKCKWYDPKIGRGTRRSHSGVVDILSTRKYNKYE 643
Query: 647 PFIMAHNVRQVYYVPYPPTLPRKRGWSVAIKTKPRGRIETE-ERNEEVAYQADD-----M 700
PFI+ QV Y+PYP T K W +K PRG I E E N+ Q ++ +
Sbjct: 644 PFILGSQADQVCYIPYPYTKKPKNIWLNVLKVNPRGNISGEYENNDPTLLQTENDDDVLL 703
Query: 701 THVNEIIEVDQVTSWQDSQVEGDQVDPSIL-EMRNEVEDENEDVVDDNN 748
T + +++ V + ++ D D E R + +ED V+D +
Sbjct: 704 TTIEDLVLETPVANLNPIILDYDVGDAEPEDEFRCNLSSLDEDEVEDED 752
>At2g12210 putative TNP2-like transposon protein
Length = 889
Score = 314 bits (805), Expect = 1e-85
Identities = 201/532 (37%), Positives = 278/532 (51%), Gaps = 51/532 (9%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
+CM K + LS ++PGP P IDV+L+PLI+DL LW GELTYD K F L+A L
Sbjct: 346 LCMKKENIMLSLLIPGPQQPGNSIDVYLEPLIEDLNHLWKKGELTYDAFSKTTFTLKAML 405
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAYG L+G G+ CP C + T + L+ K F CHR L H +R
Sbjct: 406 LWTISDFPAYGNLAGCKVKGKMGCPLCGKGTDSMWLKYSRKHV-FMCHRKGLAPTHSYRN 464
Query: 120 LKNGFKKDERVFVGPPPKI-TSEEVWTRVCDYPKVTDYGRAVPIPR-------------- 164
K F D ++ G +I T EV + ++ D+G A R
Sbjct: 465 KKAWF--DGKIEHGRKARILTGREVSQTLKNFKN--DFGNAKESGRKRKRNDCIESVTDS 520
Query: 165 ------------YGVDH----HWTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNT 208
VD W KRSIF+ L YW+D +RHNLDVMH+E+NV +I +T
Sbjct: 521 DDESSESEEDEELEVDEDELSRWKKRSIFFKLSYWEDLPVRHNLDVMHVERNVGASIVST 580
Query: 209 VMDVKGKTKDNEKARKDLQIYCKRKDLELKPQPNGK-LLKPKANYNLSAQEAKLVCQWLK 267
++ GK+KD ARKDLQ RKDL P GK P A ++LS E K C+ L
Sbjct: 581 LLHC-GKSKDGLNARKDLQDLGVRKDLH--PNAQGKRTYLPAAPWSLSKSEKKTFCKRLF 637
Query: 268 DLRMPDGYSSNIGRCADVNTGRLHGMKSHDSHIFMENFIPIAFSSL-PKHVLDPLIEISQ 326
+ + PDGY SNI R + ++ G+KSHD H+ M+ +P+A L PK +I +
Sbjct: 638 EFKGPDGYCSNISRGVSLEDCKIMGLKSHDYHVLMQQLLPVALMGLLPKGPRTAIIRLCS 697
Query: 327 FFKNLCASTLRVDELEKMEKNMPIIICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQY 386
FF +LC + ++ + ME + +C E+ FPP FFD M HL VHL EA LGGPV +
Sbjct: 698 FFNHLCQRVIDIEVISVMEAEIVETLCMFERFFPPTFFDIMVHLTVHLGREARLGGPVHF 757
Query: 387 RWMYPFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLTPSNTRNEVQV 446
RWMYPFER+M K V+N A+ EG I Y A+E F D L ++ + +
Sbjct: 758 RWMYPFERYMKVLKDFVRNPARPEGCIAESYLAEECMRFCS----DFLKKTTSVEEKPER 813
Query: 447 NDLRDPSTLSVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLE 498
N + +++ L+GR + M+ + + AH+ V+ N A PY+E
Sbjct: 814 NTEYENNSI----LEGRPISAGTSF-MLTEVDKNIAHLAVIQNMAAFDPYVE 860
>At2g10010 putative TNP2-like transposon protein
Length = 619
Score = 267 bits (682), Expect = 2e-71
Identities = 162/405 (40%), Positives = 217/405 (53%), Gaps = 42/405 (10%)
Query: 24 IDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAALMWTINDFPAYGMLSGWSTHGRFA 82
IDV+L+PLI+DL LW GELTYD K F L+A L+WTI+DFPAYG L+G G+
Sbjct: 223 IDVYLEPLIEDLNNLWKNGELTYDAFSKSTFTLKAMLLWTISDFPAYGNLAGCKVKGKMG 282
Query: 83 CPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRRLKNGFKKDERVFVGPPPKI-TSE 141
CP C +NT + L+ K + CHR L H +R K F D +V G +I T
Sbjct: 283 CPLCGKNTDSMWLKFSRKHVYM-CHRKGLAPTHIYREKKTWF--DGKVEHGRKTRILTGH 339
Query: 142 EVWTRVCDYPKVTDYGR-----------AVPIPRYGVD-------------------HHW 171
EV+ + ++ D+G P Y D + W
Sbjct: 340 EVYQNLKNFK--NDFGNVKKSGMKRKRTVYKEPVYDSDDVSSESEEDEEVEVDEDELYRW 397
Query: 172 TKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCK 231
KRSIF+ LPYW+D +RHNLDVMH EKNV +I +T++ GK+KD ARKDLQ
Sbjct: 398 KKRSIFFTLPYWEDLPVRHNLDVMHTEKNVAHSIVSTLLHC-GKSKDGLNARKDLQHLGL 456
Query: 232 RKDLELKPQPNGK-LLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGRL 290
R L P GK P A ++LS E K+ + L D + PDGY SNI R V ++
Sbjct: 457 RH--ALHPTTQGKRTYLPAAPWSLSKNEKKIFWKRLFDFKGPDGYCSNISRGVSVGECKI 514
Query: 291 HGMKSHDSHIFMENFIPIAFSS-LPKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMP 349
G+KSHD H+ M+ +P+A LPK ++ + FF LC + ++ + +E +
Sbjct: 515 SGLKSHDYHVMMQQLLPVALRGLLPKGPRTAILRLCAFFNYLCQRVIDIEVISVLETEIV 574
Query: 350 IIICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFER 394
+C ++ FPP FFD M HL +HL EA LGGPV +RWMYPFER
Sbjct: 575 ETLCMFKRFFPPTFFDIMVHLTIHLGREARLGGPVHFRWMYPFER 619
>At4g08000 putative transposon protein
Length = 609
Score = 266 bits (681), Expect = 2e-71
Identities = 133/275 (48%), Positives = 173/275 (62%), Gaps = 14/275 (5%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + P++P+A +DVFLQPLI++LK LW G YD+S QNF L+A L
Sbjct: 245 MCMNTKYLFLTILNVEPNHPRASLDVFLQPLIEELKELWSTGVDAYDVSLSQNFNLKAVL 304
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAY MLSGW THG+F+CP CME+TK+F L +G K+ WFDCHR FLPH HP RR
Sbjct: 305 LWTISDFPAYSMLSGWITHGKFSCPICMESTKSFYLPNGRKTCWFDCHRRFLPHGHPSRR 364
Query: 120 LKNGFKKDERVFVGPPPK-ITSEEVW---------TRVCDYPKVTDYGRAVPIPRYGVDH 169
K F K PPK +T E+V+ T+ D V G +P YG +H
Sbjct: 365 NKKDFLKGRDSSSEYPPKSLTGEQVYYERLASVNPTKTKD---VGGNGHEKKMPGYGKEH 421
Query: 170 HWTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIY 229
+W K SI W+L YW D LRHN+DVMH EKN D+I NT+M VK K+KDN +R D++I+
Sbjct: 422 NWHKESILWELSYWNDLNLRHNIDVMHTEKNFLDDIMNTLMSVKDKSKDNIMSRLDIEIF 481
Query: 230 CKRKDLELKPQPNGKLLKPKANYNLSAQEAKLVCQ 264
C R DL + Q G + + L +++ Q
Sbjct: 482 CSRSDLHIDSQGIGAFFRDLCSRTLQKSRVQILKQ 516
Score = 130 bits (326), Expect = 4e-30
Identities = 61/115 (53%), Positives = 76/115 (66%)
Query: 324 ISQFFKNLCASTLRVDELEKMEKNMPIIICQLEQIFPPGFFDSMEHLPVHLAYEAILGGP 383
I FF++LC+ TL+ ++ +++N+ +IIC LE+IFPP FFD MEHLP+HL YE LGGP
Sbjct: 494 IGAFFRDLCSRTLQKSRVQILKQNIVLIICNLEKIFPPSFFDVMEHLPIHLPYEPELGGP 553
Query: 384 VQYRWMYPFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLTPS 438
VQYRWMYPFERF K KN GSIV Y E YF +YF D + T S
Sbjct: 554 VQYRWMYPFERFFKKFKGKAKNKRYAAGSIVESYINDEIAYFSEYYFADHIQTKS 608
>At3g31920 hypothetical protein
Length = 725
Score = 244 bits (622), Expect = 2e-64
Identities = 152/400 (38%), Positives = 214/400 (53%), Gaps = 35/400 (8%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
MCM + L+ ++ GP P IDV+L PLIDDLK LW G YD +K++F LRA
Sbjct: 354 MCMKAENIMLTLLIHGPTAPSNNIDVYLAPLIDDLKDLWSEGIHVYDSFKKESFTLRAMF 413
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+W+I+D+PA G L+G G+ AC C ++T L+ K + R P HP+RR
Sbjct: 414 LWSISDYPALGTLAGCKVKGKQACNVCGKDTPFRWLKFSRKHVYLRNRRRLRP-GHPYRR 472
Query: 120 LKNGFKKDERVFVGPPPKI-TSEEVWTRVCDYPKVTDYGRAVPIPRYGVDHHWTKRSIFW 178
+ F D V G +I T EE++ + +A+ + I
Sbjct: 473 RRGWF--DNTVEEGTTSRIQTGEEIFEAL----------KAL-------------KMILG 507
Query: 179 DLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLELK 238
DL D +RHN+DVMH+EKNV D I + +M K+KD ARKDL+ R +L +
Sbjct: 508 DLWRETDMPVRHNIDVMHVEKNVSDAIVSMLMQ-SVKSKDGLNARKDLEDMGTRSNLHPQ 566
Query: 239 PQPNGKLLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGRLHGMKSHDS 298
+ L P A Y LS E + C+ L R PDGY +NI C ++ + G+KSHD
Sbjct: 567 LRVKRTYLPPAA-YWLSKDEKRRFCKRLARFRGPDGYCANISNCVSMDPPVIGGLKSHDH 625
Query: 299 HIFMENFIPIAFSSLPKHVLDPLIEISQ---FFKNLCASTLRVDELEKMEKNMPIIICQL 355
H+ ++N +P+A L V P + IS+ +F LC + ++L +E + +CQL
Sbjct: 626 HVLLQNLLPVALRGLLPRV--PRVAISRLCHYFNRLCQRVIDPEKLMSLESELVETMCQL 683
Query: 356 EQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERF 395
E+ FPP FD M HLP+HLA E LGGPV +RWMYPFER+
Sbjct: 684 ERYFPPSLFDIMFHLPIHLARETRLGGPVHFRWMYPFERY 723
>At4g03730 putative transposon protein
Length = 696
Score = 231 bits (590), Expect = 9e-61
Identities = 112/238 (47%), Positives = 150/238 (62%), Gaps = 11/238 (4%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
MC+ + + FLS +VPGP +PK +D++LQPLI +L LW+ GE YD S+K+ F +R AL
Sbjct: 77 MCIKREFFFLSVLVPGPKHPKKNLDIYLQPLIKELVSLWIDGEEAYDKSKKKKFTMRVAL 136
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
W I+DF YGMLS W THG +CP+C++NT +F L + K SWFDCH FLP H + +
Sbjct: 137 TWAISDFSTYGMLSVWMTHGLLSCPYCLDNTISFWLPNERKHSWFDCHGMFLPLGHMYMQ 196
Query: 120 LKNGFKKDERVFVGPPPKITSEEVWTRVCDYPKVTDYGRAVPIPRYGVDHHWTKRSIFWD 179
F+ + V PP +T C + + + I YG+ H+W KRSIFW+
Sbjct: 197 NVQAFRGGKEVRDDPP--------FTVDCGGNEHEKFAQT--IDGYGIHHNWVKRSIFWE 246
Query: 180 LPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLEL 237
LPYW++ +LRHNLD MHI+KN FDN+ NTV+ V KTKD K+R DL C R L L
Sbjct: 247 LPYWENLILRHNLDFMHIKKNFFDNLINTVLKVLEKTKDKIKSRMDLATLCNRSGLHL 304
Score = 148 bits (374), Expect = 1e-35
Identities = 116/358 (32%), Positives = 172/358 (47%), Gaps = 48/358 (13%)
Query: 300 IFMENFIPIAFSSLPKHVLDPLIEISQFFKNLCASTLRVDEL--EKMEKNMPII------ 351
IF E +P + + +H LD + FF NL + L+V E +K++ M +
Sbjct: 243 IFWE--LPYWENLILRHNLDFMHIKKNFFDNLINTVLKVLEKTKDKIKSRMDLATLCNRS 300
Query: 352 -----------------ICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFER 394
+C LE+IFPP FFD MEHLP HL EA+L GPVQYRWMY FER
Sbjct: 301 GLHLTRDGTILQILGLKLCNLEKIFPPSFFDVMEHLPDHLPDEALLSGPVQYRWMYLFER 360
Query: 395 FMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLTPSNTRNEVQVN-DLR--- 450
+M KR VKN A + GSIVA +E +YF P ++V V+ ++R
Sbjct: 361 YMYHLKRKVKNCAHIAGSIVAQCVNEEIANTSANYFGH----PEIKDDDVPVSGEIRFTY 416
Query: 451 -DPSTLSVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKP---YLEEFIAFYAE 506
P S+F +GR +GK+ W D + +L+NC + EE++
Sbjct: 417 FYPDVSSLFYHEGRVSGKLTNGWFND-NDYTVLQTFLLLNCDAFELCEWMFEEYMTEQIL 475
Query: 507 FGEGSTVGSIHE-YFPAWFKQRVYNAEPTDEV-IRLRQLSQGPLQCANEFHTYFVNGYKF 564
+ + + YF W K + +A + + + + QG + + Y GY
Sbjct: 476 RISPKEMEKVKDNYFAEWCKDYINDATKSYQFPLWMLDFVQGSNRNYTSWPIYHSRGYCL 535
Query: 565 HTHSWTEGKKTINSGVYVKGVTDGGEDDFYGVIKHIYELSYN---DNKVVLFYCDWFD 619
HTH++ + KKT N GVYV+G T+ D+YG+I+ I + Y+ K ++F C WFD
Sbjct: 536 HTHNYGKDKKTQNYGVYVRGTTN---TDYYGLIEEIMMIQYHGVVGLKALVFKCRWFD 590
>At4g08070
Length = 767
Score = 231 bits (589), Expect = 1e-60
Identities = 138/334 (41%), Positives = 192/334 (57%), Gaps = 22/334 (6%)
Query: 171 WTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYC 230
W KRSIF+ L YW+D +RHNLDVMH+E+NV +I +T++ GK+KD ARKDL++
Sbjct: 450 WKKRSIFFRLSYWQDLPVRHNLDVMHVERNVAASIVSTLLHC-GKSKDGLNARKDLEVLG 508
Query: 231 KRKDLELKPQPNGK-LLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGR 289
RKDL PQ GK P A ++LS E KL C+ L D + PDGY S+I R + +
Sbjct: 509 IRKDLH--PQTKGKRTYLPAALWSLSKSEKKLFCKRLFDFKGPDGYCSDIARGVSLEDCK 566
Query: 290 LHGMKSHDSHIFMENFIPIAFSSL-PKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNM 348
+ G+KSHD H+ M+ +PIA L PK + + +FF +LC + +++L +ME +
Sbjct: 567 VTGLKSHDYHVLMQQLLPIALRGLLPKGPRVAIGRLCKFFNHLCQRVIDMEQLLEMEAEI 626
Query: 349 PIIICQLEQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAK 408
+C E+ FPP FFD MEHL VHL EA LGGPV +RWMYPFER+M K V+N +
Sbjct: 627 VETLCLFERFFPPSFFDIMEHLTVHLGREARLGGPVHFRWMYPFERYMKVLKDFVRNTTR 686
Query: 409 VEGSIVAIYTAKETTYFIGHYFVDRLLTPSNTRNEVQVNDLRDPSTLSVFN--LDGR--H 464
EG I Y A+E F +F + +V + D +T N L GR
Sbjct: 687 PEGCIAECYLAEECIQFYSEFF----------KKTTKVQEKADRNTEFENNSILGGRPIS 736
Query: 465 AGKVLQYWMVDQKEMRSAHVHVLINCAEVKPYLE 498
AG + + + E + AH+ V+ N A V+PY+E
Sbjct: 737 AGTFIS---LTEMERKIAHLAVIQNMAVVEPYVE 767
>At2g10140 putative protein
Length = 663
Score = 189 bits (481), Expect = 4e-48
Identities = 94/185 (50%), Positives = 122/185 (65%), Gaps = 8/185 (4%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLW-VGELTYDISRKQNFKLRAAL 59
MCM YLFL+ + GP++P+A +DVFLQPLI++LK LW G TYD+S QNF L+A L
Sbjct: 322 MCMNTKYLFLTILNSGPNHPRASLDVFLQPLIEELKELWCTGVDTYDVSLSQNFNLKAVL 381
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+W I+DFPAY MLSGW+THG+ +CP CME+TK+F L +G K+ WFDCHR FLPH+HP RR
Sbjct: 382 LWAISDFPAYSMLSGWTTHGKLSCPVCMESTKSFYLPNGRKTCWFDCHRRFLPHSHPSRR 441
Query: 120 LKNGFKKD-ERVFVGPPPKITSEEVW---TRVCDYPKVTDY---GRAVPIPRYGVDHHWT 172
K F K + PP +T E+V+ + PK D G + YG +H+W
Sbjct: 442 NKKDFLKGRDASREYPPGSLTGEQVYYERLASVNPPKTKDVGGNGHEKKMRGYGKEHNWD 501
Query: 173 KRSIF 177
K SIF
Sbjct: 502 KESIF 506
Score = 103 bits (257), Expect = 4e-22
Identities = 62/183 (33%), Positives = 103/183 (55%), Gaps = 12/183 (6%)
Query: 215 KTKD--NEKARKDLQIYCKRKDLELKPQPNGKLLKPKANYNLSAQEAKLVCQWLK-DLRM 271
KTKD K ++ Y K + + + GK P Y L + + + Q++K D+R
Sbjct: 478 KTKDVGGNGHEKKMRGYGKEHNWDKESIFTGKT--PFPAYTLIEEGKQSLFQFVKHDVRF 535
Query: 272 PDGYSSNIGRCADVNTGRLHGMKSHDSHIFMENFIPIAFSS-LPKHVLDPLIEISQFFKN 330
PDG+SS++ C D+ G+ GMKSHD H+FME +P F+ L ++V L I FF++
Sbjct: 536 PDGHSSDLASCVDLENGKFSGMKSHDCHVFMERLLPFIFAELLDRNVHLALSGIGAFFRD 595
Query: 331 LCASTLRVDELEKMEKNMPIIICQLEQIFPPGF------FDSMEHLPVHLAYEAILGGPV 384
LC+ TL++ ++ +++N+ +IIC LE+IFPP F + S+ H ++ + +GG +
Sbjct: 596 LCSRTLQISRVQILKQNIVLIICNLEKIFPPSFLMLWNIYLSISHTKLNWVALSNIGGYI 655
Query: 385 QYR 387
R
Sbjct: 656 HLR 658
>At2g15070 En/Spm-like transposon protein
Length = 672
Score = 176 bits (446), Expect = 4e-44
Identities = 150/503 (29%), Positives = 217/503 (42%), Gaps = 114/503 (22%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
MCM + L+ ++ GP P IDV+L PLI+DLK L G YD K+NF LRA L
Sbjct: 279 MCMKAKNIMLTLLIHGPKAPSNNIDVYLAPLINDLKDLSSDGIQVYDSFFKENFTLRAML 338
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+W+ ++ + T G A G K D RP +N +R
Sbjct: 339 LWS---------INDYPTLGTLA---------------GCKDFKNDFGRPLERNN---KR 371
Query: 120 LKNGFKKDERVFVGPPPKITSEEVWTRVCDYPKVTDYGRAVPIPRYGVDHH---WTKRSI 176
++ +D+ YG D H W KRSI
Sbjct: 372 KRSDLCEDDE-----------------------------------YGEDTHQWRWKKRSI 396
Query: 177 FWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVMDVKGKTKDNEKARKDLQIYCKRKDLE 236
++LPYWKD +RHN+DVMH+EKNV D I +T+M K+KD ARK+L+ R +L
Sbjct: 397 LFELPYWKDLPVRHNIDVMHVEKNVSDVIVSTLMQ-SAKSKDGLNARKNLEDMGIRSNLH 455
Query: 237 LKPQPNGKLLKPKANYNLSAQEAKLVCQWLKDLRMPDGYSSNIGRCADVNTGRLHGMKSH 296
++ + L A + LS E K C+ L R PDGY +NI C V+ + G+KSH
Sbjct: 456 IQLRGKRTYLL-HAAFWLSKDEKKRFCKRLARFRGPDGYCANISNCVSVDPPVIGGLKSH 514
Query: 297 DSHIFMENFIPIAFSS-LPKHVLDPLIEISQFFKNLCASTLRVDELEKMEKNMPIIICQL 355
D H+ ++N +P+A LPK + + +F LC + ++L +E + +CQL
Sbjct: 515 DHHVLLQNLLPVALRGLLPKRPRVAISRLGHYFNRLCQRVIDPEKLISLEYELVETMCQL 574
Query: 356 EQIFPPGFFDSMEHLPVHLAYEAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVEGSIVA 415
ER+M K VKN A +E +
Sbjct: 575 -------------------------------------ERYMKTLKAYVKNFATLEACMAE 597
Query: 416 IYTAKETTYFIGHYFVDRLLTPSNTRNEVQVNDLRDPSTLSVFNLDGRHAGKVLQYWMVD 475
Y A E F + + L P V N+ D ++L L+GR K Q +
Sbjct: 598 GYLAGECMAFCLKFLQNSLSVP----EVVNRNEGVDSNSLV---LEGRPLHKATQVTLT- 649
Query: 476 QKEMRSAHVHVLINCAEVKPYLE 498
KE AH +VL+N A + PY++
Sbjct: 650 SKERDIAHRYVLMNMAVMDPYVK 672
>At1g31560 putative protein
Length = 1431
Score = 170 bits (431), Expect = 2e-42
Identities = 116/305 (38%), Positives = 154/305 (50%), Gaps = 41/305 (13%)
Query: 2 CMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAALM 60
CM + LS ++PGP P IDV+L+P I+DL LW GELTYD K F L+A L
Sbjct: 278 CMKNENIMLSLLIPGPQQPGNSIDVYLEPFIEDLNHLWKKGELTYDAFSKTTFTLKAMLF 337
Query: 61 WTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRRL 120
WTI+DFPAYG L+G G+ CP C + T + L+ K F CHR L H ++
Sbjct: 338 WTISDFPAYGNLAGCKVKGKMGCPLCGKGTDSMWLKYSRKHV-FMCHRKGLAPTHSYKNK 396
Query: 121 KNGFKKDERVFVGPPPKI-TSEEVWTRVCDYPKVTDYGRAVPIPR--------------- 164
K F D +V G +I T EV + ++ D+G A R
Sbjct: 397 KAWF--DGKVEHGRKARILTGREVSHNLKNFK--NDFGNAKESGRKRKRNDCIESVTDSD 452
Query: 165 -----------YGVDH----HWTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTV 209
VD W KRSIF+ L YW++ +RHNLDVMH+E+NV +I +T+
Sbjct: 453 NESSESEEDEEVEVDEDELSRWKKRSIFFKLSYWENLPVRHNLDVMHVERNVGASIVSTL 512
Query: 210 MDVKGKTKDNEKARKDLQIYCKRKDLELKPQPNGKLLK-PKANYNLSAQEAKLVCQWLKD 268
+ GK+KD +RKDLQ RKDL P GK P A ++LS E K C+ L +
Sbjct: 513 LHC-GKSKDGLNSRKDLQDLGVRKDLH--PNAQGKRTNLPAAPWSLSKSEKKTFCKHLFE 569
Query: 269 LRMPD 273
+ PD
Sbjct: 570 FKGPD 574
Score = 67.0 bits (162), Expect = 4e-11
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 74/252 (29%)
Query: 377 EAILGGPVQYRWMYPFERFMGDSKRAVKNLAKVEGSIVAIYTAKETTYFIGHYFVDRLLT 436
EA LGGP+ +RWMYPFER+M K V+N K + I Y A+E F D L
Sbjct: 576 EARLGGPIHFRWMYPFERYMKVLKDFVRNSVKPDVCIAESYLAEECMQFCS----DFLKK 631
Query: 437 PSNTRNEVQVNDLRDPSTLSVFNLDGRHAGKVLQYWMVDQKEMRSAHVHVLINCAEVKPY 496
++ + + N + +++ L+GR + M+ + + AH+ V+ N A + PY
Sbjct: 632 TTSVEEKPERNTEYENNSI----LEGRPISAGTSF-MLTEVDKNIAHLAVIQNMAALDPY 686
Query: 497 LEEFIAFYAEFGEGSTVGSIHEYFPAWFKQRVYNAEPTDEVIRLRQLSQGPLQCANEFHT 556
++ A +
Sbjct: 687 VD----------------------------------------------------ARSYTG 694
Query: 557 YFVNGYKFHTHSWTEGKKTINSGVYVKGVT---DGGED--------DFYGVIKHIYELSY 605
Y VNG +FHT S +++ NSGVY + T +D +Y + I L Y
Sbjct: 695 YIVNGQRFHTRSLE--RESQNSGVYYEATTICRSSAKDTSQVVDLVSYYRTVTDIILLDY 752
Query: 606 NDNKVVLFYCDW 617
N V +F C W
Sbjct: 753 NVFYVPIFRCQW 764
>At4g07750 putative transposon protein
Length = 569
Score = 169 bits (429), Expect = 4e-42
Identities = 112/296 (37%), Positives = 160/296 (53%), Gaps = 38/296 (12%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
+CM K + L+ ++PGP P IDV+L+PLI+DL LW GELTYD K F L+A L
Sbjct: 277 LCMKKENIMLTLLIPGPQQPGNNIDVYLEPLIEDLCHLWDNGELTYDAYSKSTFDLKAML 336
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DFPAYG L+G G+ CP C +NT + L+ K + CH LP H FR
Sbjct: 337 LWTISDFPAYGNLAGCKVKGKMGCPLCGKNTDSMWLKFSRKHVYM-CHIKGLPPTHHFRM 395
Query: 120 LKNGFKKDERVFVGPPPKITS-EEVWTRVCDY--------PKVTDYGRAVPI-------- 162
K+ F D + G +I S +E++ + ++ + R V I
Sbjct: 396 KKSWF--DGKAENGRKRRILSGQEIYQNLKNFKNNFGTLKQSASKRKRTVNIEADSDSDD 453
Query: 163 --------PRYGVDH----HWTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVM 210
+ VD W K+SIF+ LPYW++ L+RHNLDVMH+E+NV +I +T++
Sbjct: 454 QSSESEEDEQDQVDEEELSRWKKKSIFFKLPYWQELLVRHNLDVMHVERNVAASIISTLL 513
Query: 211 DVKGKTKDNEKARKDLQIYCKRKDLELKPQPNGK-LLKPKANYNLSAQEAKLVCQW 265
K+KD ARKDL++ RKDL P+ GK P A ++LS +E + +W
Sbjct: 514 HC-WKSKDGLNARKDLEVLGIRKDLH--PKTKGKRTYLPAALWSLS-KEIECTARW 565
>At1g35280 hypothetical protein
Length = 557
Score = 166 bits (420), Expect = 5e-41
Identities = 119/303 (39%), Positives = 154/303 (50%), Gaps = 40/303 (13%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
+CM K + LS ++PGP P IDV+L+PLI+DL LW GELTYD K F L+A L
Sbjct: 171 LCMKKENIMLSLLIPGPQQPGNSIDVYLEPLIEDLNHLWKKGELTYDAFSKTTFTLKAML 230
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPFRR 119
+WTI+DF AYG L+G G+ CP C + T + L+ K F CHR L H +R
Sbjct: 231 LWTISDFSAYGNLAGCKVKGKMGCPLCGKGTDSMWLKYSRKHV-FMCHRKGLAPTHSYRN 289
Query: 120 LKNGFKKDERVFVGPPPKI-TSEEVWTRV----CDYPKVTDYGR---------------- 158
K F D ++ G +I T EV + D+ + GR
Sbjct: 290 KKAWF--DGKIEHGRKARILTGREVSQTLKNFKNDFRNAKESGRKRKRNDCIESVTDSDD 347
Query: 159 ----AVPIPRYGVD----HHWTKRSIFWDLPYWKDNLLRHNLDVMHIEKNVFDNIFNTVM 210
+ VD W KRSIF+ L YW+D +RHNLDVMH+E+NV +I +T++
Sbjct: 348 ESSESEEDEELEVDKDELSRWKKRSIFFKLSYWEDLPVRHNLDVMHVERNVGASIVSTLL 407
Query: 211 DVKGKTKDNEKARKDLQIYCKRKDLELKPQPNGK-LLKPKANYNLSAQEAK---LVCQWL 266
GK+KD ARKDLQ RKDL P GK P A ++LS E K VC L
Sbjct: 408 HC-GKSKDGLNARKDLQDLGVRKDLH--PNAQGKRTYLPAAPWSLSKSERKHSASVCLSL 464
Query: 267 KDL 269
K L
Sbjct: 465 KVL 467
>At1g34660 hypothetical protein
Length = 501
Score = 165 bits (418), Expect = 8e-41
Identities = 71/118 (60%), Positives = 91/118 (76%), Gaps = 1/118 (0%)
Query: 1 MCMTKPYLFLSCIVPGPDNPKAGIDVFLQPLIDDLKRLWV-GELTYDISRKQNFKLRAAL 59
+CM + +LFLS +VPGP++P+ +DVFLQPLI +L+ LW G + YD+S K NF +RA L
Sbjct: 359 LCMKREFLFLSILVPGPEHPRRSLDVFLQPLIHELQLLWSEGVVAYDVSLKNNFVMRAVL 418
Query: 60 MWTINDFPAYGMLSGWSTHGRFACPHCMENTKAFTLESGGKSSWFDCHRPFLPHNHPF 117
MWTI+DFPAYGMLSGW+THGR +CP+C + AF L+ G KS WFDCHR FLP NH +
Sbjct: 419 MWTISDFPAYGMLSGWTTHGRLSCPYCQDTIDAFQLKHGKKSCWFDCHRRFLPKNHSY 476
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,117,772
Number of Sequences: 26719
Number of extensions: 962888
Number of successful extensions: 3601
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 2963
Number of HSP's gapped (non-prelim): 346
length of query: 773
length of database: 11,318,596
effective HSP length: 107
effective length of query: 666
effective length of database: 8,459,663
effective search space: 5634135558
effective search space used: 5634135558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC141863.3