BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140913.6 - phase: 0 
         (831 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g64110 unknown protein                                            1107  0.0
At4g28000 putative protein                                            933  0.0
At1g02890 hypothetical protein                                        469  e-132
At4g24850 unknown protein (At4g24850)                                 410  e-114
At4g02470                                                             410  e-114
At1g50140 hypothetical protein, 5' partial                            379  e-105
At3g19740 ATPase, putative                                            379  e-105
At1g62130 hypothetical protein                                        283  3e-76
At4g27680 unknown protein                                             256  5e-68
At5g53540 26S proteasome regulatory particle chain RPT6-like pro...   253  3e-67
At3g27120 spastin protein, putative                                   226  5e-59
At1g80350 CAD ATPase (AAA1)                                           216  5e-56
At2g34560 katanin like protein                                        199  7e-51
At2g27600 putative AAA-type ATPase                                    190  2e-48
At3g09840 putative transitional endoplasmic reticulum ATPase          183  3e-46
At3g53230 CDC48 - like protein                                        182  7e-46
At5g03340 transitional endoplasmic reticulum ATPase                   182  9e-46
At3g01610 putative cell division control protein                      166  6e-41
At5g43010 26S proteasome AAA-ATPase subunit RPT4a (gb|AAF22524.1)     162  9e-40
At1g45000 26S proteasome AAA-ATPase subunit RPT4a like protein        159  6e-39

>At1g64110 unknown protein
          Length = 824

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 587/834 (70%), Positives = 675/834 (80%), Gaps = 18/834 (2%)

Query: 6   MLISA-ALSVGVGVGLGLASGQTMFK-PNTYSSSSNALTPDKIENEMLRLVVDGRESNVT 63
           ML+SA  + VGVGVGLGLASGQ + K     SSS+NA+T DK+E E+LR VVDGRES +T
Sbjct: 1   MLLSALGVGVGVGVGLGLASGQAVGKWAGGNSSSNNAVTADKMEKEILRQVVDGRESKIT 60

Query: 64  FDNFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKAL 123
           FD FPYYLSEQTRVLLTSAAYVHLKH + SKYTRNL+PASR ILLSGPAELYQQ+LAKAL
Sbjct: 61  FDEFPYYLSEQTRVLLTSAAYVHLKHFDASKYTRNLSPASRAILLSGPAELYQQMLAKAL 120

Query: 124 THYFEAKLLLFDVTDFSLKIQSRYGSSNCETS-FTRSTSETALARLSDLFGSFALFPQRE 182
            H+F+AKLLL DV DF+LKIQS+YGS N E+S F RS SE+AL +LS LF SF++ PQRE
Sbjct: 121 AHFFDAKLLLLDVNDFALKIQSKYGSGNTESSSFKRSPSESALEQLSGLFSSFSILPQRE 180

Query: 183 ENQ--GKIHRQSSGSDLRQMEAEGSYS--KLRRNASASANISSIGLQSNPTNSAPGKHIT 238
           E++  G + RQSSG D++    EGS +  KLRRN+SA+ANIS++   SN   SAP K  +
Sbjct: 181 ESKAGGTLRRQSSGVDIKSSSMEGSSNPPKLRRNSSAAANISNLASSSNQV-SAPLKRSS 239

Query: 239 GWPFDEKILIQTLYKVLLYVSKTYPIVLYMRDADKLLCRSQRIYKLFQTMLTKLSGPILI 298
            W FDEK+L+Q+LYKVL YVSK  PIVLY+RD +  L RSQR Y LFQ +L KLSGP+LI
Sbjct: 240 SWSFDEKLLVQSLYKVLAYVSKANPIVLYLRDVENFLFRSQRTYNLFQKLLQKLSGPVLI 299

Query: 299 IGSRILD-SGNECKRVDEMLTSLFPYNIEIKPPEDESRLVSWKSQFEADMKKIQIQDNKN 357
           +GSRI+D S  + + +DE L+++FPYNI+I+PPEDE+ LVSWKSQ E DM  IQ QDN+N
Sbjct: 300 LGSRIVDLSSEDAQEIDEKLSAVFPYNIDIRPPEDETHLVSWKSQLERDMNMIQTQDNRN 359

Query: 358 HIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIIVSAISYHIMKNKEPEYRNGKLIIPC 417
           HIMEVL+ NDL C DL+SI   DT VLSNYIEEI+VSA+SYH+M NK+PEYRNGKL+I  
Sbjct: 360 HIMEVLSENDLICDDLESISFEDTKVLSNYIEEIVVSALSYHLMNNKDPEYRNGKLVISS 419

Query: 418 NSLSHALGIFQAGKFGDRDSLKLEAQAVTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPT 477
            SLSH   +F+ GK G R+ LK + +  +S K+ +  ++KPE KTES    V T +    
Sbjct: 420 ISLSHGFSLFREGKAGGREKLKQKTKEESS-KEVKAESIKPETKTES----VTTVSSKEE 474

Query: 478 SVRKTDGENSVPASKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVML 537
             ++   E   P +    PDNEFEKRIRPEVIPA EI VTF DIGALDE K+SLQELVML
Sbjct: 475 PEKEAKAEKVTPKAPEVAPDNEFEKRIRPEVIPAEEINVTFKDIGALDEIKESLQELVML 534

Query: 538 PLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGED 597
           PLRRPDLF GGLLKPCRGILLFGPPGTGKTMLAKAIA EAGASFINVSMSTITSKWFGED
Sbjct: 535 PLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGED 594

Query: 598 EKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSED 657
           EKNVRALFTLA+KVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMS+WDGL +K  +
Sbjct: 595 EKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGE 654

Query: 658 RILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELAT 717
           RILVLAATNRPFDLDEAIIRRFERRIMVGLP+ ENRE ILRTLLAKEKV   LD+KELA 
Sbjct: 655 RILVLAATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAM 714

Query: 718 MTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERV 777
           MTEGY+GSDLKNLCTTAAYRPVRELIQQE  KD++KKK  E   + +  + KE    ERV
Sbjct: 715 MTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAGEEDEGKE----ERV 770

Query: 778 ITLRPLNMQDFKMAKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 831
           ITLRPLN QDFK AK+QVAASFAAEGAGM EL+QWN+LYGEGGSRKKEQL+YFL
Sbjct: 771 ITLRPLNRQDFKEAKNQVAASFAAEGAGMGELKQWNELYGEGGSRKKEQLTYFL 824


>At4g28000 putative protein
          Length = 726

 Score =  933 bits (2412), Expect = 0.0
 Identities = 511/833 (61%), Positives = 612/833 (73%), Gaps = 109/833 (13%)

Query: 1   MEQKGMLISAALSVGVGVGLGLASGQTMFK-PNTYSSSSNALTPDKIENEMLRLVVDGRE 59
           MEQK +L SA L VGVG+G+GLASGQ++ K  N   S+ + LT +KIE E++R +VDGRE
Sbjct: 1   MEQKSVLFSA-LGVGVGLGIGLASGQSLGKWANGSISAEDGLTGEKIEQELVRQIVDGRE 59

Query: 60  SNVTFDNFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVL 119
           S+VTFD FPYYLSE+TR+LLTSAAYVHLK +++SK+TRNLAP S+ ILLSGPA+  Q  +
Sbjct: 60  SSVTFDEFPYYLSEKTRLLLTSAAYVHLKQSDISKHTRNLAPGSKAILLSGPADTEQVWM 119

Query: 120 AKALTHYFEAKLLLFDVTDFSLKIQSRYGSSNCETSFTRSTSETALARLSDLFGSFALFP 179
            +  T                              +  R TS   L   S  F   +  P
Sbjct: 120 RQERT-----------------------------WTLRRHTSGNDLH--SRGFDVTSQPP 148

Query: 180 QREENQGKIHRQSSGSDLRQMEAEGSYSKLRRNASASANISSIGLQSNPTNSAPGKHITG 239
           + + N       S+ SD+  + +  S + +  ++  SAN+                    
Sbjct: 149 RLKRN------ASAASDMSSISSR-SATSVSASSKRSANLC------------------- 182

Query: 240 WPFDEKILIQTLYKVLLYVSKTYPIVLYMRDADKLLCRSQRIYKLFQTMLTKLSGPILII 299
             FDE++ +Q+LYKVL+ +S+T PI++Y+RD +K LC+S+R YKLFQ +LTKLSGP+L++
Sbjct: 183 --FDERLFLQSLYKVLVSISETNPIIIYLRDVEK-LCQSERFYKLFQRLLTKLSGPVLVL 239

Query: 300 GSRILDSGNECKRVDEMLTSLFPYNIEIKPPEDESRLVSWKSQFEADMKKIQIQDNKNHI 359
           GSR+L+  ++C+ V E +++LFPYNIEI+PPEDE++L+SWK++FE DMK IQ QDNKNHI
Sbjct: 240 GSRLLEPEDDCQEVGEGISALFPYNIEIRPPEDENQLMSWKTRFEDDMKVIQFQDNKNHI 299

Query: 360 MEVLAANDLDCHDLDSICVADTMVLSNYIEEIIVSAISYHIMKNKEPEYRNGKLIIPCNS 419
            EVLAANDL+C DL SIC ADTM LS++IEEI+VSAISYH+M NKEPEY+NG+L+I  NS
Sbjct: 300 AEVLAANDLECDDLGSICHADTMFLSSHIEEIVVSAISYHLMNNKEPEYKNGRLVISSNS 359

Query: 420 LSHALGIFQAGKFGDRDSLKLEAQAVTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSV 479
           LSH L I Q G+    DSLKL+                                      
Sbjct: 360 LSHGLNILQEGQGCFEDSLKLDTNI----------------------------------- 384

Query: 480 RKTDGENSVPASKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPL 539
                      SK   PDNEFEKRIRPEVIPANEIGVTF+DIG+LDETK+SLQELVMLPL
Sbjct: 385 ----------DSKEVAPDNEFEKRIRPEVIPANEIGVTFADIGSLDETKESLQELVMLPL 434

Query: 540 RRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEK 599
           RRPDLF+GGLLKPCRGILLFGPPGTGKTM+AKAIANEAGASFINVSMSTITSKWFGEDEK
Sbjct: 435 RRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEK 494

Query: 600 NVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRI 659
           NVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFM++WDGL S + DRI
Sbjct: 495 NVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRI 554

Query: 660 LVLAATNRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMT 719
           LVLAATNRPFDLDEAIIRRFERRIMVGLPS E+RE ILRTLL+KEK    LDF+ELA MT
Sbjct: 555 LVLAATNRPFDLDEAIIRRFERRIMVGLPSVESREKILRTLLSKEKTE-NLDFQELAQMT 613

Query: 720 EGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKKKKDAEGQ-NSQDAQDAKEEVEQERVI 778
           +GYSGSDLKN CTTAAYRPVRELI+QE  KD +++K  E + NS++  +AKEEV +ER I
Sbjct: 614 DGYSGSDLKNFCTTAAYRPVRELIKQECLKDQERRKREEAEKNSEEGSEAKEEVSEERGI 673

Query: 779 TLRPLNMQDFKMAKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 831
           TLRPL+M+D K+AKSQVAASFAAEGAGMNEL+QWNDLYGEGGSRKKEQLSYFL
Sbjct: 674 TLRPLSMEDMKVAKSQVAASFAAEGAGMNELKQWNDLYGEGGSRKKEQLSYFL 726


>At1g02890 hypothetical protein
          Length = 1240

 Score =  469 bits (1207), Expect = e-132
 Identities = 267/652 (40%), Positives = 385/652 (58%), Gaps = 116/652 (17%)

Query: 220  SSIGLQSNPTNSAPGKHITGWPFDEKILIQTLYKVLLYVSKTYPIVLYMRDADKLLCRSQ 279
            SS+ L+S+ ++ A           +K+ I  +++V    S+   ++L+++D +K +  + 
Sbjct: 665  SSLRLESSSSDDA-----------DKLAINEIFEVAFNESERGSLILFLKDIEKSVSGNT 713

Query: 280  RIYKLFQTMLTKLSGPILII---------------------------------------G 300
             +Y   ++ L  L   I++I                                       G
Sbjct: 714  DVYITLKSKLENLPENIVVIASQTQLDNRKEKSHPGGFLFTKFGSNQTALLDLAFPDTFG 773

Query: 301  SRILDSGNECKRVDEMLTSLFPYNIEIKPPEDESRLVSWKSQFEADMKKIQIQDNKNHIM 360
             R+ D   E  +  + +T LFP  + I+ PEDE+ LV WK + E D + ++ Q N   I 
Sbjct: 774  GRLQDRNTEMPKAVKQITRLFPNKVTIQLPEDEASLVDWKDKLERDTEILKAQANITSIR 833

Query: 361  EVLAANDLDCHDLDSICVADTMVLSNYIEEIIVSAISYHIMKNKEPEYRNGKLIIPCNSL 420
             VL+ N L C D++ +C+ D  + S+ +E+++  A ++H+M   EP  ++ KLII   S+
Sbjct: 834  AVLSKNQLVCPDIEILCIKDQTLPSDSVEKVVGFAFNHHLMNCSEPTVKDNKLIISAESI 893

Query: 421  SHALGIFQAGKFGDRDSLKLEAQAVTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVR 480
            ++ L +                  + +E K    ++K                       
Sbjct: 894  TYGLQLLHE---------------IQNENKSTKKSLKDV--------------------- 917

Query: 481  KTDGENSVPASKAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLR 540
                          V +NEFEK++  +VIP ++IGV+FSDIGAL+  KD+L+ELVMLPL+
Sbjct: 918  --------------VTENEFEKKLLSDVIPPSDIGVSFSDIGALENVKDTLKELVMLPLQ 963

Query: 541  RPDLF-EGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEK 599
            RP+LF +G L KP +GILLFGPPGTGKTMLAKA+A EAGA+FIN+SMS+ITSK     EK
Sbjct: 964  RPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK----GEK 1019

Query: 600  NVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRI 659
             V+A+F+LA+K++P++IFVDEVDSMLG+R   GEHEAMRK+KNEFM NWDGL +K ++R+
Sbjct: 1020 YVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERV 1079

Query: 660  LVLAATNRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMT 719
            LVLAATNRPFDLDEA+IRR  RR+MV LP + NR  IL  +LAKE++   +D + +A MT
Sbjct: 1080 LVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMT 1139

Query: 720  EGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVIT 779
            +GYSGSDLKNLC TAA+ P+RE+    ++K+ K++  A+ +N    Q             
Sbjct: 1140 DGYSGSDLKNLCVTAAHLPIREI----LEKEKKERSVAQAENRAMPQLYSS-------TD 1188

Query: 780  LRPLNMQDFKMAKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 831
            +RPLNM DFK A  QV AS A++ + MNEL+QWN+LYGEGGSRKK  LSYF+
Sbjct: 1189 VRPLNMNDFKTAHDQVCASVASDSSNMNELQQWNELYGEGGSRKKTSLSYFM 1240



 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 34/101 (33%), Positives = 60/101 (58%), Gaps = 8/101 (7%)

Query: 37  SSNALTPDKIENEMLRL-VVDGRESNVTFDNFPYYLSEQTRVLLTSAAYVHLKHA-EVSK 94
           S++ LT  +   + LR  +++ ++  V+F+NFPY+LS  T+ +L  + Y H+K+  E ++
Sbjct: 421 SASVLTRRQAHKDSLRGGILNPQDIEVSFENFPYFLSGTTKDVLMISTYAHIKYGKEYAE 480

Query: 95  YTRNLAPASRTILLSGPAELYQQVLAKALTHYFEAKLLLFD 135
           Y  +L  A         +E+YQ++LAKAL     AKL++ D
Sbjct: 481 YASDLPTACPR------SEIYQEMLAKALAKQCGAKLMIVD 515


>At4g24850 unknown protein (At4g24850)
          Length = 442

 Score =  410 bits (1055), Expect = e-114
 Identities = 231/506 (45%), Positives = 313/506 (61%), Gaps = 71/506 (14%)

Query: 330 PEDESRLVSWKSQFEADMKKIQIQDNKNHIMEVLAANDLDCHDLDS----ICVADTMVLS 385
           P+DE RL  WK Q + D +  +++ N NH+  VL    L C  L++    +C+ D  +  
Sbjct: 2   PQDEKRLTLWKHQMDRDAETSKVKSNFNHLRMVLRRRGLGCEGLETTWSRMCLKDLTLQR 61

Query: 386 NYIEEIIVSAISYHIMKNKEPEYRNGKLIIPCNSLSHALGIFQAGKFGDRDSLKLEAQAV 445
           + +E+II  A   HI  +K P+    K+ +   S+                         
Sbjct: 62  DSVEKIIGWAFGNHI--SKNPDTDPAKVTLSRESI------------------------- 94

Query: 446 TSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRIR 505
                                       E    + + D + S  + K  V +N FEKR+ 
Sbjct: 95  ----------------------------EFGIGLLQNDLKGSTSSKKDIVVENVFEKRLL 126

Query: 506 PEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLF-EGGLLKPCRGILLFGPPGT 564
            +VI  ++I VTF DIGAL++ KD L+ELVMLPL+RP+LF +G L KPC+GILLFGPPGT
Sbjct: 127 SDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGT 186

Query: 565 GKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSM 624
           GKTMLAKA+A EA A+FIN+SMS+ITSKWFGE EK V+A+F+LA+K+SP++IFVDEVDSM
Sbjct: 187 GKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSM 246

Query: 625 LGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIRRFERRIM 684
           LG+R    EHEA RKIKNEFM +WDGLT++  +R+LVLAATNRPFDLDEA+IRR  RR+M
Sbjct: 247 LGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIRRLPRRLM 306

Query: 685 VGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQ 744
           VGLP   NR  IL+ +LAKE +   LD  E+A+MT GYSGSDLKNLC TAA+RP++E+++
Sbjct: 307 VGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILE 366

Query: 745 QEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKMAKSQVAASFAAEGA 804
           +E     K+++DA           K          LR LN++DF+ A   V+AS ++E A
Sbjct: 367 KE-----KRERDAA------LAQGKVPPPLSGSSDLRALNVEDFRDAHKWVSASVSSESA 415

Query: 805 GMNELRQWNDLYGEGGSRKKEQLSYF 830
            M  L+QWN L+GEGGS K++  S++
Sbjct: 416 TMTALQQWNKLHGEGGSGKQQSFSFY 441


>At4g02470
          Length = 371

 Score =  410 bits (1053), Expect = e-114
 Identities = 205/341 (60%), Positives = 264/341 (77%), Gaps = 12/341 (3%)

Query: 492 KAEVPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGG-LL 550
           K  V +NEFEK++  +VIP ++IGV+F DIGAL+  K++L+ELVMLPL+RP+LF+ G L 
Sbjct: 42  KDVVTENEFEKKLLSDVIPPSDIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLT 101

Query: 551 KPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAK 610
           KP +GILLFGPPGTGKTMLAKA+A EAGA+FIN+SMS+ITSKWFGE EK V+A+F+LA+K
Sbjct: 102 KPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASK 161

Query: 611 VSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFD 670
           ++P++IFVDEVDSMLG+R   GEHEAMRK+KNEFM NWDGL +K  +R+LVLAATNRPFD
Sbjct: 162 IAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFD 221

Query: 671 LDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNL 730
           LDEA+IRR  RR+MV LP A NR  IL  +LAKE++   +D + +A MT+GYSGSDLKNL
Sbjct: 222 LDEAVIRRLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNL 281

Query: 731 CTTAAYRPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKM 790
           C TAA+ P+RE+    ++K+ K+K  A+ +N       +          +R L M DFK 
Sbjct: 282 CVTAAHFPIREI----LEKEKKEKTAAQAEN-------RPTPPLYSCTDVRSLTMNDFKA 330

Query: 791 AKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 831
           A  QV AS +++ + MNEL+QWN+LYGEGGSRKK  LSYF+
Sbjct: 331 AHDQVCASVSSDSSNMNELQQWNELYGEGGSRKKTSLSYFM 371


>At1g50140 hypothetical protein, 5' partial
          Length = 601

 Score =  379 bits (973), Expect = e-105
 Identities = 231/614 (37%), Positives = 339/614 (54%), Gaps = 103/614 (16%)

Query: 243 DEKILIQTLYKVLLYVSKTYPIVLYMRDADKLLCRS------QRIYKLFQTMLTKLSGPI 296
           D  I ++ L +VL  +    P+++Y  D+ + L R+      +      + M  KLSGPI
Sbjct: 64  DGYIAMEALNEVLQSIQ---PLIVYFPDSTQWLSRAVPKTRRKEFVDKVKEMFDKLSGPI 120

Query: 297 LII-GSRILDSGNE-------------------CKRVDEMLTSLFPYNIEIKPPEDESRL 336
           ++I G   +++G++                    K  +  +  LF   + + PP++E  L
Sbjct: 121 VMICGQNKIETGSKEREKFPLPLKGLTEGFTGRGKSEENEIYKLFTNVMRLHPPKEEDTL 180

Query: 337 VSWKSQFEADMKKIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVLSNYIEEIIVSAI 396
             +K Q   D + +  + N N +++ L  ++L C DL  +     ++     E+ I  A 
Sbjct: 181 RLFKKQLGEDRRIVISRSNINELLKALEEHELLCTDLYQVNTDGVILTKQKAEKAIGWAK 240

Query: 397 SYHIMKNKEPEYRNGKLIIPCNSLSHALGIFQAGKFGDRDSLKLEAQAVTSEKKEEGAAV 456
           ++++     P  + G+L +P                  R+SL++   ++   +K E  ++
Sbjct: 241 NHYLASCPVPLVKGGRLSLP------------------RESLEI---SIARLRKLEDNSL 279

Query: 457 KPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRIRPEVIPANEIGV 516
           KP    ++                              +  +E+E+     V+   EIGV
Sbjct: 280 KPSQNLKN------------------------------IAKDEYERNFVSAVVAPGEIGV 309

Query: 517 TFSDIGALDETKDSLQELVMLPLRRPDLF-EGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
            F DIGAL++ K +L ELV+LP+RRP+LF  G LL+PC+GILLFGPPGTGKT+LAKA+A 
Sbjct: 310 KFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALAT 369

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHE 635
           EAGA+FI+++ ST+TSKWFG+ EK  +ALF+ A K++P IIFVDE+DS+LG R    EHE
Sbjct: 370 EAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHE 429

Query: 636 AMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREN 695
           A R+++NEFM+ WDGL SK   RIL+L ATNRPFDLD+A+IRR  RRI V LP AENR  
Sbjct: 430 ATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLK 489

Query: 696 ILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKKKK 755
           IL+  L  E +     F++LA  TEGYSGSDLKNLC  AAYRPV+EL+Q+E       +K
Sbjct: 490 ILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEE-------QK 542

Query: 756 DAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKMAKSQVAASFAAEGAGMNELRQWNDL 815
            A  + S                 LR L++ DF  +K++V+ S A +   MNELR+WN+ 
Sbjct: 543 GARAEASPG---------------LRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQ 587

Query: 816 YGEGGSRKKEQLSY 829
           YGEGGSR K    +
Sbjct: 588 YGEGGSRTKSPFGF 601


>At3g19740 ATPase, putative
          Length = 439

 Score =  379 bits (972), Expect = e-105
 Identities = 211/506 (41%), Positives = 297/506 (57%), Gaps = 68/506 (13%)

Query: 325 IEIKPPEDESRLVSWKSQFEADMKKIQIQDNKNHIMEVLAANDLDCHDLDSICVADTMVL 384
           + + PP++E  L+ +  Q   D + +  + N N +++ L  N+L C DL  +     ++ 
Sbjct: 1   MNLVPPKEEENLIVFNKQLGEDRRIVMSRSNLNELLKALEENELLCTDLYQVNTDGVILT 60

Query: 385 SNYIEEIIVSAISYHIMKNKEPEYRNGKLIIPCNSLSHALGIFQAGKFGDRDSLKLEAQA 444
               E++I  A ++++     P  + G+LI+P                  R+S+++  + 
Sbjct: 61  KQRAEKVIGWARNHYLSSCPSPSIKEGRLILP------------------RESIEISVKR 102

Query: 445 VTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRI 504
           + ++          E  +  P   +K    +                   +  +EFE   
Sbjct: 103 LKAQ----------EDISRKPTQNLKRFLFLQN-----------------IAKDEFETNF 135

Query: 505 RPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLF-EGGLLKPCRGILLFGPPG 563
              V+   EIGV F DIGAL+  K +L ELV+LP+RRP+LF  G LL+PC+GILLFGPPG
Sbjct: 136 VSAVVAPGEIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPG 195

Query: 564 TGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDS 623
           TGKT+LAKA+A EAGA+FI+++ ST+TSKWFG+ EK  +ALF+ A+K++P IIFVDEVDS
Sbjct: 196 TGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDS 255

Query: 624 MLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIRRFERRI 683
           +LG R    EHEA R+++NEFM+ WDGL SK   RIL+L ATNRPFDLD+A+IRR  RRI
Sbjct: 256 LLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRRI 315

Query: 684 MVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELI 743
            V LP AENR  IL+  L  E +  G +F +LA  TEGYSGSDLKNLC  AAYRPV+EL+
Sbjct: 316 YVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAYRPVQELL 375

Query: 744 QQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKMAKSQVAASFAAEG 803
           Q+E        KD+    S D               LRPL++ DF  +K++V+ S A + 
Sbjct: 376 QEE-------NKDSVTNASPD---------------LRPLSLDDFIQSKAKVSPSVAYDA 413

Query: 804 AGMNELRQWNDLYGEGGSRKKEQLSY 829
             MNELR+WN+ YGEGG+R K    +
Sbjct: 414 TTMNELRKWNEQYGEGGTRTKSPFGF 439


>At1g62130 hypothetical protein
          Length = 372

 Score =  283 bits (724), Expect = 3e-76
 Identities = 164/358 (45%), Positives = 213/358 (58%), Gaps = 67/358 (18%)

Query: 495 VPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLL---- 550
           V +N FE     ++IP +EIGVTF DIGAL+  KD+L+ELVMLP + P+LF  G L    
Sbjct: 61  VTENTFEIS---DIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKML 117

Query: 551 -----------------KPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKW 593
                            +PC GILLFGP GTGKTMLAKA+A EAGA+ IN+SMS    +W
Sbjct: 118 TLWIGGFLISLLLYFSTQPCNGILLFGPSGTGKTMLAKAVATEAGANLINMSMS----RW 173

Query: 594 FGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTS 653
           F E EK V+A+F+LA+K+SP+IIF+DEV+SML        H    K KNEF+ NWDGL +
Sbjct: 174 FSEGEKYVKAVFSLASKISPSIIFLDEVESML--------HRYRLKTKNEFIINWDGLRT 225

Query: 654 KSEDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFK 713
             ++R+LVLAATNRPFDLDEA+IRR   R+MVGLP A +R  IL+ +L+KE +    D  
Sbjct: 226 NEKERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDID 285

Query: 714 ELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEVE 773
           E+A+MT GYSG+DLK      A                + +    G    D         
Sbjct: 286 EVASMTNGYSGNDLKERDAAVA----------------EGRVPPAGSGGSD--------- 320

Query: 774 QERVITLRPLNMQDFKMAKSQVAASFAAEGAGMNELRQWNDLYGEGGSRKKEQLSYFL 831
                 LR L M+DF+ A   V+ S +++   M  LRQWN+ YGEGGSR+ E  S ++
Sbjct: 321 ------LRVLKMEDFRNALELVSMSISSKSVNMTALRQWNEDYGEGGSRRNESFSQYV 372


>At4g27680 unknown protein
          Length = 398

 Score =  256 bits (653), Expect = 5e-68
 Identities = 132/253 (52%), Positives = 175/253 (68%), Gaps = 2/253 (0%)

Query: 495 VPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFE-GGLLKPC 553
           V  N +E  I  +VI  + I V F  IG L+  K +L ELV+LPL+RP+LF  G LL P 
Sbjct: 60  VQTNPYEDVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQ 119

Query: 554 RGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSP 613
           +G+LL+GPPGTGKTMLAKAIA E+GA FINV +S + SKWFG+ +K V A+F+LA K+ P
Sbjct: 120 KGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQP 179

Query: 614 TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDE 673
            IIF+DEV+S LGQR R  +HEAM  +K EFM+ WDG ++    R++VLAATNRP +LDE
Sbjct: 180 AIIFIDEVESFLGQR-RSTDHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDE 238

Query: 674 AIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTT 733
           AI+RR  +   +G+P    R  IL+  L  E+V   +DF  +A + EGY+GSD+  LC  
Sbjct: 239 AILRRLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKK 298

Query: 734 AAYRPVRELIQQE 746
           AAY P+RE++  E
Sbjct: 299 AAYFPIREILDAE 311


>At5g53540 26S proteasome regulatory particle chain RPT6-like
           protein
          Length = 403

 Score =  253 bits (646), Expect = 3e-67
 Identities = 131/260 (50%), Positives = 180/260 (68%), Gaps = 4/260 (1%)

Query: 495 VPDNEFEKRIRPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFE-GGLLKPC 553
           +  N++E  I  +VI    I V F  IG L+  K +L ELV+LPL+RP+LF  G LL P 
Sbjct: 63  IQTNQYEDVIACDVINPLHIDVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQ 122

Query: 554 RGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSP 613
           +G+LL+GPPGTGKTMLAKAIA E+ A FINV +S + SKWFG+ +K V A+F+LA K+ P
Sbjct: 123 KGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQP 182

Query: 614 TIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDE 673
            IIF+DEVDS LGQR R  ++EAM  +K EFM+ WDG T+    R++VLAATNRP +LDE
Sbjct: 183 AIIFIDEVDSFLGQR-RSTDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDE 241

Query: 674 AIIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTT 733
           AI+RRF +   +G+P  + R  IL+ +L  E V   +++  +A + E Y+GSD+  LC  
Sbjct: 242 AILRRFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKK 301

Query: 734 AAYRPVRELIQQEIQKDSKK 753
           AAY P+RE++  E +K+ K+
Sbjct: 302 AAYFPIREIL--EAEKEGKR 319


>At3g27120 spastin protein, putative
          Length = 327

 Score =  226 bits (575), Expect = 5e-59
 Identities = 131/289 (45%), Positives = 183/289 (62%), Gaps = 14/289 (4%)

Query: 496 PDNEFEKRIR---PEVIP--ANEI-----GVTFSDIGALDETKDSLQELVMLPLRRPDLF 545
           PD E  +++R   P +I   +NEI      V + DI  L+  K  + E+V+ PL RPD+F
Sbjct: 17  PDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIF 76

Query: 546 EGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALF 605
           +G    P +G+LLFGPPGTGKTM+ KAIA EA A+F  +S S++TSKW GE EK VRALF
Sbjct: 77  KG-CRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALF 135

Query: 606 TLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAAT 665
            +A+   P +IFVDE+DS+L QR   GEHE+ R++K +F+   +G  S SE +IL++ AT
Sbjct: 136 GVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSE-QILLIGAT 194

Query: 666 NRPFDLDEAIIRRFERRIMVGLPSAENRENILRTLLAKEKVH--GGLDFKELATMTEGYS 723
           NRP +LDEA  RR  +R+ + LPS+E R  I++ LL K+ +      D   +  +TEGYS
Sbjct: 195 NRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYS 254

Query: 724 GSDLKNLCTTAAYRPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEV 772
           GSD+KNL   A   P+RE +++ I   +  K D      QD +DA +EV
Sbjct: 255 GSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQEV 303


>At1g80350 CAD ATPase (AAA1)
          Length = 523

 Score =  216 bits (549), Expect = 5e-56
 Identities = 132/374 (35%), Positives = 205/374 (54%), Gaps = 32/374 (8%)

Query: 453 GAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKA---EVPDNEFEKRIRPEVI 509
           GA  K      S     K  A         +G+     SK    E PD +    +  +V+
Sbjct: 171 GATSKSTAGARSSTAGKKGAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERDVL 230

Query: 510 PANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTML 569
            +   GV + D+  L E K  L+E V+LPL  P+ F+G + +P +G+L+FGPPGTGKT+L
Sbjct: 231 DSTP-GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQG-IRRPWKGVLMFGPPGTGKTLL 288

Query: 570 AKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRT 629
           AKA+A E G +F NVS +T+ SKW GE E+ VR LF LA   +P+ IF+DE+DS+   R 
Sbjct: 289 AKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRG 348

Query: 630 RVGEHEAMRKIKNEFMSNWDGL--TSKSEDR----ILVLAATNRPFDLDEAIIRRFERRI 683
             GEHE+ R++K+E +   DG+  T+ +ED     ++VLAATN P+D+DEA+ RR E+RI
Sbjct: 349 GSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRI 408

Query: 684 MVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELI 743
            + LP  E+R+ ++   L   +V   ++ +++A  TEGYSG DL N+C  A+   +R  I
Sbjct: 409 YIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKI 468

Query: 744 QQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKMAKSQVAASFAAEG 803
             + + + K               +K+++  +      P+ M DF+ A  +V  S ++  
Sbjct: 469 AGKTRDEIKNM-------------SKDDISND------PVAMCDFEEAIRKVQPSVSSSD 509

Query: 804 AGMNELRQWNDLYG 817
              +E  +W   +G
Sbjct: 510 IEKHE--KWLSEFG 521


>At2g34560 katanin like protein
          Length = 384

 Score =  199 bits (505), Expect = 7e-51
 Identities = 117/309 (37%), Positives = 174/309 (55%), Gaps = 9/309 (2%)

Query: 441 EAQAVTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEF 500
           E      ++ E+G++    G   + +  V T  +  T++   +     P      P    
Sbjct: 22  EEDVSNKDQPEDGSSNGNNGDVNNNSSPV-TNQDGNTALANGNVIREKPKKSMFPPFESA 80

Query: 501 EKRIRPEVIPANEI----GVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGI 556
           E R   E +  + I     + +  I  L+  K  L+E V++P++ P  F G LL P +GI
Sbjct: 81  ETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNG-LLTPWKGI 139

Query: 557 LLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTII 616
           LLFGPPGTGKTMLAKA+A E   +F N+S S++ SKW G+ EK +R LF LA   +P+ I
Sbjct: 140 LLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTI 199

Query: 617 FVDEVDSMLGQRTRVG--EHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEA 674
           F+DE+D+++ QR   G  EHEA R++K E +   DGL  K+ + + VLAATN P++LD A
Sbjct: 200 FLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGL-QKTNELVFVLAATNLPWELDAA 258

Query: 675 IIRRFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTA 734
           ++RR E+RI+V LP  E R  +   L+  +     L    L   +EGYSGSD++ LC  A
Sbjct: 259 MLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEA 318

Query: 735 AYRPVRELI 743
           A +P+R  +
Sbjct: 319 AMQPLRRTL 327


>At2g27600 putative AAA-type ATPase
          Length = 435

 Score =  190 bits (483), Expect = 2e-48
 Identities = 113/295 (38%), Positives = 168/295 (56%), Gaps = 8/295 (2%)

Query: 449 KKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRIRPEV 508
           + EE  AV  EG +    P    +A + T  +    +        E P+    +      
Sbjct: 65  RAEEIRAVLDEGGS---GPGSNGDAAVATRPKTKPKDGEGGGKDGEDPEQSKLRAGLNSA 121

Query: 509 IPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTM 568
           I   +  + +SD+  L+  K +LQE V+LP++ P  F G   +P R  LL+GPPGTGK+ 
Sbjct: 122 IVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSY 180

Query: 569 LAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR 628
           LAKA+A EA ++F +VS S + SKW GE EK V  LF +A + +P+IIFVDE+DS+ G R
Sbjct: 181 LAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTR 240

Query: 629 TRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIRRFERRIMVGLP 688
               E EA R+IK E +    G+   +++++LVLAATN P+ LD+AI RRF++RI + LP
Sbjct: 241 GEGNESEASRRIKTELLVQMQGV-GHNDEKVLVLAATNTPYALDQAIRRRFDKRIYIPLP 299

Query: 689 SAENRENILRTLLAKEKVHG--GLDFKELATMTEGYSGSDLKNLCTTAAYRPVRE 741
            A+ R+++ +  L  +  H     DF+ L   TEG+SGSD+        + PVR+
Sbjct: 300 EAKARQHMFKVHLG-DTPHNLTEPDFEYLGQKTEGFSGSDVSVCVKDVLFEPVRK 353


>At3g09840 putative transitional endoplasmic reticulum ATPase
          Length = 809

 Score =  183 bits (465), Expect = 3e-46
 Identities = 103/314 (32%), Positives = 174/314 (54%), Gaps = 11/314 (3%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V+++DIG L+  K  LQE V  P+  P+ FE   + P +G+L +GPPG GKT+LAKAIAN
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHE 635
           E  A+FI+V    + + WFGE E NVR +F  A + +P ++F DE+DS+  QR      +
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596

Query: 636 ---AMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSA 690
              A  ++ N+ ++  DG+ +K    + ++ ATNRP  +D A++R  R ++ I + LP  
Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKK--TVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 654

Query: 691 ENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKD 750
           ++R NI +  L K  +   +D   LA  T+G+SG+D+  +C  A    +RE I+++I+K+
Sbjct: 655 DSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKE 714

Query: 751 SKKKKDAEGQNSQDAQDAKEEVEQ---ERVITLRPLNMQDFKMAKSQVAASFAAEGAGMN 807
            ++ ++ E    +D  D   E++    E  +     ++ D  + K Q  A    +  G  
Sbjct: 715 KRRSENPEAM-EEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG 773

Query: 808 ELRQWNDLYGEGGS 821
              ++ +  G G +
Sbjct: 774 SEFRFENSAGSGAT 787



 Score =  171 bits (434), Expect = 1e-42
 Identities = 102/250 (40%), Positives = 153/250 (60%), Gaps = 9/250 (3%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V + D+G + +    ++ELV LPLR P LF+   +KP +GILL+GPPG+GKT++A+A+AN
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHE 635
           E GA F  ++   I SK  GE E N+R  F  A K +P+IIF+DE+DS+  +R +    E
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-NGE 322

Query: 636 AMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSAENR 693
             R+I ++ ++  DGL  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P    R
Sbjct: 323 VERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380

Query: 694 ENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQ-EIQKDSK 752
             +LR      K+   +D + ++  T GY G+DL  LCT AA + +RE +   +++ DS 
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS- 439

Query: 753 KKKDAEGQNS 762
              DAE  NS
Sbjct: 440 --IDAEILNS 447


>At3g53230 CDC48 - like protein
          Length = 815

 Score =  182 bits (462), Expect = 7e-46
 Identities = 95/258 (36%), Positives = 156/258 (59%), Gaps = 6/258 (2%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V++ DIG L+  K  LQE V  P+  P+ FE   + P +G+L +GPPG GKT+LAKAIAN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR-TRVGE- 633
           E  A+FI++    + + WFGE E NVR +F  A + +P ++F DE+DS+  QR   VG+ 
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597

Query: 634 HEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSAE 691
             A  ++ N+ ++  DG+ +K    + ++ ATNRP  +D A++R  R ++ I + LP  E
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKK--TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEE 655

Query: 692 NRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDS 751
           +R  I ++ L K  V   +D + LA  T+G+SG+D+  +C  +    +RE I+++I+K+ 
Sbjct: 656 SRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKER 715

Query: 752 KKKKDAEGQNSQDAQDAK 769
           K+ +  E     + + A+
Sbjct: 716 KRAESPEAMEEDEEEIAE 733



 Score =  171 bits (433), Expect = 2e-42
 Identities = 100/249 (40%), Positives = 152/249 (60%), Gaps = 7/249 (2%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V + D+G + +    ++ELV LPLR P LF+   +KP +GILL+GPPG+GKT++A+A+AN
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHE 635
           E GA F  ++   I SK  GE E N+R  F  A K +P+IIF+DE+DS+  +R +    E
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-HGE 323

Query: 636 AMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSAENR 693
             R+I ++ ++  DGL  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P    R
Sbjct: 324 VERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381

Query: 694 ENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDSKK 753
             +LR      K+   +D + ++  T GY G+DL  LCT AA + +RE  + ++     +
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIRE--KMDVIDLDDE 439

Query: 754 KKDAEGQNS 762
           + DAE  NS
Sbjct: 440 EIDAEILNS 448


>At5g03340 transitional endoplasmic reticulum ATPase
          Length = 810

 Score =  182 bits (461), Expect = 9e-46
 Identities = 103/311 (33%), Positives = 169/311 (54%), Gaps = 9/311 (2%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V++ DIG L+  K  LQE V  P+  P+ FE   + P +G+L +GPPG GKT+LAKAIAN
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR-TRVGE- 633
           E  A+FI+V    + + WFGE E NVR +F  A + +P ++F DE+DS+  QR    G+ 
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596

Query: 634 HEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSAE 691
             A  ++ N+ ++  DG+ +K    + ++ ATNRP  +D A++R  R ++ I + LP  +
Sbjct: 597 GGAADRVLNQLLTEMDGMNAKK--TVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDED 654

Query: 692 NRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQEIQKDS 751
           +R NI +  L K  V   +D   LA  T+G+SG+D+  +C  A    +RE I+++I+ + 
Sbjct: 655 SRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENER 714

Query: 752 KKKKDAEGQNSQDAQDAKEEVEQ---ERVITLRPLNMQDFKMAKSQVAASFAAEGAGMNE 808
           ++ ++ E        D   E+     E  +     ++ D  + K Q  A    +  G   
Sbjct: 715 RRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGS 774

Query: 809 LRQWNDLYGEG 819
             +++   G G
Sbjct: 775 EFRFDSTAGVG 785



 Score =  171 bits (434), Expect = 1e-42
 Identities = 102/250 (40%), Positives = 153/250 (60%), Gaps = 9/250 (3%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           V + D+G + +    ++ELV LPLR P LF+   +KP +GILL+GPPG+GKT++A+A+AN
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHE 635
           E GA F  ++   I SK  GE E N+R  F  A K +P+IIF+DE+DS+  +R +    E
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-NGE 322

Query: 636 AMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSAENR 693
             R+I ++ ++  DGL  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P    R
Sbjct: 323 VERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380

Query: 694 ENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQ-EIQKDSK 752
             +LR      K+   +D + ++  T GY G+DL  LCT AA + +RE +   +++ DS 
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS- 439

Query: 753 KKKDAEGQNS 762
              DAE  NS
Sbjct: 440 --IDAEILNS 447


>At3g01610 putative cell division control protein
          Length = 703

 Score =  166 bits (419), Expect = 6e-41
 Identities = 113/381 (29%), Positives = 187/381 (48%), Gaps = 39/381 (10%)

Query: 447 SEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRIRP 506
           +EK  E   V  +G+++      + EA++  S+    G   +     + P          
Sbjct: 64  AEKNVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGP---------- 113

Query: 507 EVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGK 566
                     TF D G + +  D L+  V+ P+  P+ F+   +KP  GIL  GPPG GK
Sbjct: 114 ----------TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGK 163

Query: 567 TMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLG 626
           T LA AIANEAG  F  +S + + S   G  E+N+R LF+ A + +P+I+F+DE+D+ +G
Sbjct: 164 TKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDA-IG 222

Query: 627 QRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDR--------ILVLAATNRPFDLDEAIIR- 677
            +    + E  ++I  + ++  DG  +K +          +LV+ ATNRP  LD A+ R 
Sbjct: 223 SKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRS 282

Query: 678 -RFERRIMVGLPSAENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAY 736
            RFE  I +  P  + R  IL  +  K ++ G  D K +A +T G+ G+DL+++   A  
Sbjct: 283 GRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGR 342

Query: 737 RPVRELIQQEIQKDSKKKKDAEGQNSQDAQDAKEEVEQERVITLRPLNMQDFKMAKSQVA 796
           + ++ ++     + S++  D E   S       EE E E++     + M DF+ A + V 
Sbjct: 343 KAIKRILD---SRKSEQSGDGEDDKSWLRMPWPEE-ELEKLF----VKMSDFEEAVNLVQ 394

Query: 797 ASFAAEGAGMNELRQWNDLYG 817
           AS   EG  +    +W+D+ G
Sbjct: 395 ASLTREGFSIVPDVKWDDVGG 415



 Score =  147 bits (372), Expect = 2e-35
 Identities = 94/302 (31%), Positives = 163/302 (53%), Gaps = 18/302 (5%)

Query: 445 VTSEKKEEGAAVKPEGKTESPAPAVKTEAEIPTSVRKTDGENSVPASKAEVPDNEFEKRI 504
           +   +K E +    + K+    P  + E E    V+ +D E +V   +A +    F    
Sbjct: 348 ILDSRKSEQSGDGEDDKSWLRMPWPEEELE-KLFVKMSDFEEAVNLVQASLTREGFS--- 403

Query: 505 RPEVIPANEIGVTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGT 564
              ++P     V + D+G LD  +      ++ P+++PD+++   +    G LL+GPPG 
Sbjct: 404 ---IVP----DVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGC 456

Query: 565 GKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSM 624
           GKT++AKA ANEAGA+F+++  + + +K+ GE E  +R LF  A   +P +IF DEVD++
Sbjct: 457 GKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDAL 516

Query: 625 LGQRTRVGEHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERR 682
              R + G    + ++ N+F+   DG   ++   + V+ ATNRP  +D A +R  RF   
Sbjct: 517 TTSRGKEGAW-VVERLLNQFLVELDGGERRN---VYVIGATNRPDVVDPAFLRPGRFGNL 572

Query: 683 IMVGLPSAENRENILRTLLAKEKVHGGLDFKELA-TMTEGYSGSDLKNLCTTAAYRPVRE 741
           + V LP+A+ R +IL+ +  K+ +   +D   +A    EG+SG+DL +L   A ++ V E
Sbjct: 573 LYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEE 632

Query: 742 LI 743
           +I
Sbjct: 633 MI 634


>At5g43010 26S proteasome AAA-ATPase subunit RPT4a (gb|AAF22524.1)
          Length = 399

 Score =  162 bits (409), Expect = 9e-40
 Identities = 92/262 (35%), Positives = 156/262 (59%), Gaps = 12/262 (4%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           +++S +G L +    L+E + LPL  P+LF    +KP +G+LL+GPPGTGKT+LA+AIA+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVG--- 632
              A+F+ V  S I  K+ GE  + +R +F  A +  P IIF+DE+D++ G+R   G   
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255

Query: 633 EHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSA 690
           + E  R +  E ++  DG  +    ++ ++ ATNRP  LD A++R  R +R+I + LP+ 
Sbjct: 256 DREIQRTLM-ELLNQLDGFDNLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 312

Query: 691 ENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRE----LIQQE 746
           ++R +IL+   A    HG +D++ +  + EG++G+DL+N+CT A    +R     +I ++
Sbjct: 313 QSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHED 372

Query: 747 IQKDSKKKKDAEGQNSQDAQDA 768
             K  +K  +A+   S    +A
Sbjct: 373 FMKAVRKLSEAKKLESSSHYNA 394


>At1g45000 26S proteasome AAA-ATPase subunit RPT4a like protein
          Length = 399

 Score =  159 bits (402), Expect = 6e-39
 Identities = 91/262 (34%), Positives = 154/262 (58%), Gaps = 12/262 (4%)

Query: 516 VTFSDIGALDETKDSLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIAN 575
           +++S +G L +    L+E + LPL  P+LF    +KP +G+LL+GPPGTGKT+LA+AIA+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195

Query: 576 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVG--- 632
              A+F+ V  S I  K+ GE  + +R +F  A +  P IIF+DE+D++ G+R   G   
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255

Query: 633 EHEAMRKIKNEFMSNWDGLTSKSEDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSA 690
           + E  R +  E ++  DG       ++ ++ ATNRP  LD A++R  R +R+I + LP+ 
Sbjct: 256 DREIQRTLM-ELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 312

Query: 691 ENRENILRTLLAKEKVHGGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRE----LIQQE 746
           ++R  IL+   +    HG +D++ +  + EG++G+DL+N+CT A    +R     +I ++
Sbjct: 313 QSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHED 372

Query: 747 IQKDSKKKKDAEGQNSQDAQDA 768
             K  +K  +A+   S    +A
Sbjct: 373 FMKAVRKLSEAKKLESSSHYNA 394


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.315    0.132    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,595,140
Number of Sequences: 26719
Number of extensions: 751342
Number of successful extensions: 3124
Number of sequences better than 10.0: 171
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2696
Number of HSP's gapped (non-prelim): 276
length of query: 831
length of database: 11,318,596
effective HSP length: 108
effective length of query: 723
effective length of database: 8,432,944
effective search space: 6097018512
effective search space used: 6097018512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)