BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.8 - phase: 0
(122 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g30560 hypothetical protein 151 7e-38
At1g35940 hypothetical protein 147 2e-36
At3g31440 hypothetical protein 144 8e-36
At3g31980 hypothetical protein 144 1e-35
At3g13250 hypothetical protein 143 2e-35
At3g42100 putative protein 142 3e-35
At5g34960 putative protein 139 3e-34
At5g32630 putative protein 137 1e-33
At2g07620 putative helicase 136 2e-33
At2g14470 pseudogene 129 3e-31
At1g52960 hypothetical protein 122 4e-29
At4g03690 hypothetical protein 121 9e-29
At3g43350 putative protein 115 4e-27
At3g51700 unknown protein 112 6e-26
At1g54430 hypothetical protein 111 1e-25
At3g30420 hypothetical protein 110 2e-25
At5g37110 putative helicase 107 1e-24
At5g28780 putative protein 103 3e-23
At2g14300 pseudogene; similar to MURA transposase of maize Muta... 103 3e-23
At5g28670 putative protein 100 2e-22
>At3g30560 hypothetical protein
Length = 1473
Score = 151 bits (382), Expect = 7e-38
Identities = 69/117 (58%), Positives = 94/117 (79%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR+++G+ + + V IPR+ LTPSD R+PFK KRRQFP+SV+FAM INKSQGQSL
Sbjct: 1357 GDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSL 1416
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+VG+YLP P+FSHGQLYVA+S+V S+GGLK+LI D + +NVV++E+FRN+
Sbjct: 1417 GNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRNL 1473
>At1g35940 hypothetical protein
Length = 1678
Score = 147 bits (370), Expect = 2e-36
Identities = 70/116 (60%), Positives = 92/116 (78%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM INKSQGQSLE
Sbjct: 1562 TQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLE 1621
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
H+G+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D +NVV++EVF+N+
Sbjct: 1622 HIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQNI 1677
>At3g31440 hypothetical protein
Length = 536
Score = 144 bits (364), Expect = 8e-36
Identities = 68/113 (60%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM INKSQGQSLEHVG
Sbjct: 423 VEAKVITGDRIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHVG 482
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D + +N+V++EVF+N+
Sbjct: 483 LYLPKPVFSHGQLYVALSRVTSKKGLKILILDKNGKLQKQTTNIVFKEVFQNI 535
>At3g31980 hypothetical protein
Length = 1099
Score = 144 bits (362), Expect = 1e-35
Identities = 66/121 (54%), Positives = 94/121 (77%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
V + G + LE RVI+G + +KV I + ++PSD ++PF+ +RRQFPI+V+FAM INKSQ
Sbjct: 977 VTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQ 1036
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
GQSL+ VG+YLP P+FSHGQLYVA+S+VTS+ GLK+LI D + + NVV++E+F+N
Sbjct: 1037 GQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1096
Query: 122 V 122
+
Sbjct: 1097 I 1097
>At3g13250 hypothetical protein
Length = 1419
Score = 143 bits (361), Expect = 2e-35
Identities = 67/113 (59%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
+E +VI+G I + V+IP +++TPSD ++PFK +RRQFP+SV+F M INKSQGQSLE VG
Sbjct: 1307 VEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVG 1366
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D + +NVV++EVF+N+
Sbjct: 1367 LYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQNI 1419
>At3g42100 putative protein
Length = 1752
Score = 142 bits (359), Expect = 3e-35
Identities = 68/113 (60%), Positives = 91/113 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ +VI+ I + V IP ++LTPSD ++PFK +RRQFP+SV+FAM INKSQGQSLE VG
Sbjct: 1639 VQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEQVG 1698
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D + +NVV++EVF+N+
Sbjct: 1699 LYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVVFKEVFQNI 1751
>At5g34960 putative protein
Length = 1033
Score = 139 bits (350), Expect = 3e-34
Identities = 68/116 (58%), Positives = 89/116 (76%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I V IP ++LTP+D ++PFK +RRQFP+SV+FAM IN SQGQSLE
Sbjct: 917 TQIVEAKVITGDIIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLE 976
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
HVG+YLP +FSHGQLYVA+S+VTS+ GLK LI D D +NVV++EVF+N+
Sbjct: 977 HVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVVFKEVFQNI 1032
>At5g32630 putative protein
Length = 856
Score = 137 bits (346), Expect = 1e-33
Identities = 65/113 (57%), Positives = 89/113 (78%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ +VI+G I + + IP ++LTPSD ++PFK +RRQFP+S +FAM INKSQGQSLE G
Sbjct: 743 VQAKVITGDIIGDIILIPLINLTPSDTKLPFKMRRRQFPLSDAFAMTINKSQGQSLEQAG 802
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+YLP +FSHGQLYVA+S+VTS+ GLKILI D D D +NVV++E+F+N+
Sbjct: 803 LYLPKLVFSHGQLYVALSRVTSKSGLKILILDKDGDIQKQTTNVVFKELFQNI 855
>At2g07620 putative helicase
Length = 1241
Score = 136 bits (343), Expect = 2e-33
Identities = 64/121 (52%), Positives = 92/121 (75%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
V + G + LE RVI+G + +KV I + ++PSD ++PF+ +RRQFPI+V+FAM I KSQ
Sbjct: 1119 VTQMGNHILEARVITGDRVRDKVIIIKAQISPSDTKLPFRMRRRQFPIAVAFAMRIKKSQ 1178
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRN 121
GQSL+ V +YLP P+FSHGQLYVA+S+VTS+ GLK+LI D + + NVV++E+F+N
Sbjct: 1179 GQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1238
Query: 122 V 122
+
Sbjct: 1239 L 1239
>At2g14470 pseudogene
Length = 1265
Score = 129 bits (325), Expect = 3e-31
Identities = 60/97 (61%), Positives = 79/97 (80%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T +E +VI+G I + IP ++LTP++ ++PFK +RRQFP+SV+F M INKS+GQSLE
Sbjct: 1166 TQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEGQSLE 1225
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDD 103
HVG+YLP P+FSHGQLYVA+S+VTS+ GLKILI D D
Sbjct: 1226 HVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKD 1262
>At1g52960 hypothetical protein
Length = 924
Score = 122 bits (306), Expect = 4e-29
Identities = 56/87 (64%), Positives = 73/87 (83%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ R I+G+ + + V IPR+ +TPSD R+PFK +RRQFP+SV+FAM INKSQGQ+LE VG
Sbjct: 836 IQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTINKSQGQTLESVG 895
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLK 96
+YLP P+FSHGQLYVAIS+VTS+ G K
Sbjct: 896 LYLPRPVFSHGQLYVAISRVTSKTGTK 922
>At4g03690 hypothetical protein
Length = 570
Score = 121 bits (303), Expect = 9e-29
Identities = 57/117 (48%), Positives = 86/117 (72%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR ++G+ + + V I + LTPS +R+PFK +R+QFP+SV+FAM+INKSQ QSL
Sbjct: 453 GDKLVQGRPLTGTRVGKLVLILMMPLTPSAHRLPFKMRRKQFPLSVAFAMMINKSQRQSL 512
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+VG+ L P+FSHGQLYVA+S+V S+ LK+LI D +NV+++E+F+N+
Sbjct: 513 ANVGINLLKPVFSHGQLYVAMSRVKSKARLKVLITDSKGKQKKETTNVIFKEIFQNL 569
>At3g43350 putative protein
Length = 830
Score = 115 bits (289), Expect = 4e-27
Identities = 53/87 (60%), Positives = 71/87 (80%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ R I+G+ + + V IPR+ +TP D R+PFK +R+QF +SV+FAM INKSQGQ+LE VG
Sbjct: 742 IQARFITGNRVGKIVLIPRMLITPLDTRLPFKMRRKQFALSVAFAMTINKSQGQTLESVG 801
Query: 70 VYLPSPIFSHGQLYVAISQVTSRGGLK 96
+YLP P+FSHGQLYVAIS+VTS+ G K
Sbjct: 802 LYLPRPVFSHGQLYVAISRVTSKTGTK 828
Score = 115 bits (287), Expect = 7e-27
Identities = 52/83 (62%), Positives = 70/83 (83%)
Query: 10 LEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVG 69
++ R I+G+ + + V IPR+ +TPSD R+PFK +R+QF +SV+FAM INKSQGQ+LE VG
Sbjct: 626 IQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRKQFALSVAFAMTINKSQGQTLESVG 685
Query: 70 VYLPSPIFSHGQLYVAISQVTSR 92
+YLP P+FSHGQLYVAIS+VTS+
Sbjct: 686 LYLPRPVFSHGQLYVAISRVTSK 708
Score = 69.7 bits (169), Expect = 3e-13
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 52 SFAMIINKSQGQSLEHVGVYLPSPIFSHGQLYVAISQVTSR 92
+FAM INKSQGQ+LE VG+YLP P+FSHGQLYVAIS+VTS+
Sbjct: 552 AFAMTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSK 592
>At3g51700 unknown protein
Length = 344
Score = 112 bits (279), Expect = 6e-26
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 7 TYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLE 66
T+ LE +I+G+N EKV IPR+ + + P K +RRQFP+ ++FAM I++SQ Q+L
Sbjct: 219 TFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLS 278
Query: 67 HVGVYLPSPIFSHGQLYVAISQVTSRGGLKILIND-DDDDDIDVASNVVYREVF 119
VG+YLP + HGQ YVAIS+V SR GLK+LI D D D + NVV++E+F
Sbjct: 279 KVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNVVFKELF 332
>At1g54430 hypothetical protein
Length = 1639
Score = 111 bits (277), Expect = 1e-25
Identities = 56/118 (47%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Query: 6 GTYQLEGRVISGSNID-EKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQS 64
G L+ ++S + + +KV IPR+ L+P D++ PF +RRQFP+ + +AM INKSQGQ+
Sbjct: 1515 GDKVLKAEILSDTTKERKKVLIPRIILSPQDSKHPFTLRRRQFPVRMCYAMTINKSQGQT 1574
Query: 65 LEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
L V +YLP P+FSHGQLYVA+S+VTS GL +L + + +N+VYREVF +
Sbjct: 1575 LNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL-DTSKKKEGKYVTNIVYREVFNGL 1631
>At3g30420 hypothetical protein
Length = 837
Score = 110 bits (274), Expect = 2e-25
Identities = 52/101 (51%), Positives = 73/101 (71%), Gaps = 1/101 (0%)
Query: 22 EKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSLEHVGVYLPSPIFSHGQ 81
+KV IPR+ L+P D++ PF +RRQFP+ + +AM +NKSQGQ+L V +YLP P+FSHGQ
Sbjct: 730 KKVLIPRIILSPQDSKHPFTLRRRQFPVRMCYAMTVNKSQGQTLNRVALYLPKPVFSHGQ 789
Query: 82 LYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
LYVA+S+VTS GL +L + + +N+VYREVF +
Sbjct: 790 LYVALSRVTSPKGLTVL-DTSKKKEGKYVTNIVYREVFNGL 829
>At5g37110 putative helicase
Length = 1307
Score = 107 bits (268), Expect = 1e-24
Identities = 51/96 (53%), Positives = 69/96 (71%)
Query: 2 VEEGGTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQ 61
+ + G + L+ +++G V IPRL L PSD ++PF+ +R Q P++V FAM INKSQ
Sbjct: 1197 ITQMGPFILQAMILTGDRAGHLVLIPRLKLAPSDTKLPFRMRRTQLPLAVCFAMTINKSQ 1256
Query: 62 GQSLEHVGVYLPSPIFSHGQLYVAISQVTSRGGLKI 97
GQSL+ VG++L P FSHGQLYVAIS+VTS+ LKI
Sbjct: 1257 GQSLKRVGIFLLRPCFSHGQLYVAISRVTSKTRLKI 1292
>At5g28780 putative protein
Length = 337
Score = 103 bits (256), Expect = 3e-23
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G +E ++++G++ + V IPR L+P + PF +R+QFP+ V +AM I K+QGQSL
Sbjct: 216 GEQVIEAQIVTGTHAGKMVSIPRFILSPPQSEHPFTLRRQQFPMRVCYAMTIIKNQGQSL 275
Query: 66 EHVGVYLPSPIFSHGQLYVAISQVTSRGGLKILINDDDDDDIDVASNVVYREVFRNV 122
+ +YLP+P+FSH QLYVA+S+VTS GL IL DD + D N+VY+E + ++
Sbjct: 276 KSDVLYLPNPVFSHVQLYVALSRVTSPIGLTILHGDDQKN--DEVKNIVYKEFYNDL 330
>At2g14300 pseudogene; similar to MURA transposase of maize Mutator
transposon
Length = 1230
Score = 103 bits (256), Expect = 3e-23
Identities = 46/75 (61%), Positives = 61/75 (81%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR+++G+ + + V IPR+SLTPSD R+PFK KRR FP+SV+FAM INKSQGQSL
Sbjct: 1156 GDKLVQGRILTGTRVGKLVIIPRMSLTPSDRRLPFKMKRRHFPLSVAFAMTINKSQGQSL 1215
Query: 66 EHVGVYLPSPIFSHG 80
+VG+YLP +FSHG
Sbjct: 1216 GNVGMYLPKAVFSHG 1230
>At5g28670 putative protein
Length = 647
Score = 100 bits (248), Expect = 2e-22
Identities = 45/76 (59%), Positives = 62/76 (81%)
Query: 6 GTYQLEGRVISGSNIDEKVFIPRLSLTPSDNRIPFKFKRRQFPISVSFAMIINKSQGQSL 65
G ++GR+++G+ + + V IPR+ LTPSD+R+PF +RRQF +SV+FAMIINKSQGQSL
Sbjct: 572 GDKLVQGRLLTGTRVGKLVLIPRMPLTPSDSRLPFTMQRRQFSLSVAFAMIINKSQGQSL 631
Query: 66 EHVGVYLPSPIFSHGQ 81
+VG+YL P+FSHGQ
Sbjct: 632 PNVGIYLLKPVFSHGQ 647
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.140 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,761,088
Number of Sequences: 26719
Number of extensions: 108952
Number of successful extensions: 478
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 436
Number of HSP's gapped (non-prelim): 41
length of query: 122
length of database: 11,318,596
effective HSP length: 87
effective length of query: 35
effective length of database: 8,994,043
effective search space: 314791505
effective search space used: 314791505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Medicago: description of AC140549.8