BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.10 - phase: 0
(184 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11730 putative GTP-binding protein (ATFP8) 253 4e-68
At4g17530 ras-related small GTP-binding protein RAB1c 249 5e-67
At1g02130 GTP-binding protein, ara-5 245 8e-66
At5g47201 ras-related small GTP-binding protein-like 244 2e-65
At3g09900 putative Ras-like GTP-binding protein 163 4e-41
At3g46060 GTP-binding protein ara-3 162 9e-41
At5g59840 GTP-binding protein ara-3 162 1e-40
At5g03520 GTP-binding protein - like 161 2e-40
At3g53610 GTPase AtRAB8 160 5e-40
At4g17170 GTP-binding RAB2A like protein 135 9e-33
At4g17160 GTP-binding RAB2A like protein 135 9e-33
At3g07410 GTP-binding protein like 134 2e-32
At4g35860 GTP-binding protein GB2 134 3e-32
At2g43130 Ras-related GTP-binding protein (ARA-4) 130 5e-31
At4g39990 GTP-binding protein GB3 128 2e-30
At5g65270 GTP-binding protein 125 1e-29
At4g18800 ras-like GTP-binding protein 124 2e-29
At5g47520 GTP-binding protein-like 124 3e-29
At1g09630 putative RAS-related protein, RAB11C 124 3e-29
At1g06400 unknown protein 124 3e-29
>At3g11730 putative GTP-binding protein (ATFP8)
Length = 205
Score = 253 bits (646), Expect = 4e-68
Identities = 137/199 (68%), Positives = 153/199 (76%), Gaps = 20/199 (10%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
DYLFKLL+IGDSSVGKSCLLLRFADD+Y D+YISTIGVDF K ++
Sbjct: 6 DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
TITSSYYRGAHGIIIVYD T++ESFNNVKQWL EIDRYAN SV KLL+GNK D+
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSK-SAA 166
++K+V T T +A ADELGIPFLETSAKDSINVEQAFLT+A EIK KMGSQ +K S
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185
Query: 167 ESVQMKGQPIQQNT-NCCG 184
+VQMKGQPIQQN CCG
Sbjct: 186 GTVQMKGQPIQQNNGGCCG 204
>At4g17530 ras-related small GTP-binding protein RAB1c
Length = 202
Score = 249 bits (637), Expect = 5e-67
Identities = 129/196 (65%), Positives = 150/196 (75%), Gaps = 19/196 (9%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
DYLFKLL+IGDS VGKSCLLLRFADDSY D+YISTIGVDF K ++
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
TITSSYYRGAHGII+ YDVTD+ESFNNVKQWL+EIDRYA+ +V+KLLVGNKCDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
T K+V T TAKAFADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP G S
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG-SKPP 184
Query: 168 SVQMKGQPIQQNTNCC 183
+VQ++GQP+ Q + CC
Sbjct: 185 TVQIRGQPVNQQSGCC 200
>At1g02130 GTP-binding protein, ara-5
Length = 203
Score = 245 bits (626), Expect = 8e-66
Identities = 125/196 (63%), Positives = 149/196 (75%), Gaps = 18/196 (9%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
DYLFKLL+IGDS VGKSCLLLRF+DDSY ++YISTIGVDF K ++
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
TITSSYYRGAHGIIIVYDVTD ESFNNVKQWL EIDRYA+ +V+KLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
T+N+ + TAKAFADE+GIPF+ETSAKD+ NVEQAF+ M+A IK +M SQP G+ +
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185
Query: 168 SVQMKGQPIQQNTNCC 183
+VQ++GQP+ Q CC
Sbjct: 186 TVQIRGQPVAQKNGCC 201
>At5g47201 ras-related small GTP-binding protein-like
Length = 202
Score = 244 bits (622), Expect = 2e-65
Identities = 127/196 (64%), Positives = 149/196 (75%), Gaps = 19/196 (9%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
DYLFKLL+IGDS VGKSCLLLRFADDSY D+YISTIGVDF K ++
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
TITSSYYRGAHGII+ YDVTD+ESFNNVKQWL+EIDRYA+ +V+KLLVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
T K+V T TAKAFADELGIPFLETSAK++ NVE+AF+ M A IK +M SQP G +
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG-AKPP 184
Query: 168 SVQMKGQPIQQNTNCC 183
+VQ++GQP+ Q + CC
Sbjct: 185 TVQIRGQPVNQQSGCC 200
>At3g09900 putative Ras-like GTP-binding protein
Length = 218
Score = 163 bits (413), Expect = 4e-41
Identities = 91/204 (44%), Positives = 131/204 (63%), Gaps = 27/204 (13%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFAKPPSCRL------------ 53
DYL KLL+IGDS VGKSCLLLRF+DD++ ++I+TIG+DF K + L
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDF-KIRTVELDGKRIKLQIWDT 71
Query: 54 -------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD 106
TIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ SV+K+LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKAD 131
Query: 107 LTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKM-----GSQPT 160
+ ++K V T +A ADE GI F ETSAK + NVEQ FL++A +IK ++ ++P
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQ 191
Query: 161 GSK-SAAESVQMKGQPIQQNTNCC 183
G K + ++ + + + CC
Sbjct: 192 GIKITKQDANKASSSSTNEKSACC 215
>At3g46060 GTP-binding protein ara-3
Length = 216
Score = 162 bits (410), Expect = 9e-41
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 26/204 (12%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFAKPPSCRL------------ 53
DYL KLL+IGDS VGKSCLLLRF+D S+ ++I+TIG+DF K + L
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDF-KIRTIELDGKRIKLQIWDT 71
Query: 54 -------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD 106
TIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ +V+K+LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 107 LTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSA 165
+ ++K V T +A ADE GI F ETSAK ++NVE+ F ++ +IK ++ + ++ A
Sbjct: 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPA 191
Query: 166 AESVQMKGQ-----PIQQNTNCCG 184
+ Q Q + CCG
Sbjct: 192 TIKISQTDQAAGAGQATQKSACCG 215
>At5g59840 GTP-binding protein ara-3
Length = 216
Score = 162 bits (409), Expect = 1e-40
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 26/204 (12%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFAKPPSCRL------------ 53
DYL KLL+IGDS VGKSCLLLRF+D S+ ++I+TIG+DF K + L
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDF-KIRTIELDGKRIKLQIWDT 71
Query: 54 -------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD 106
TIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ +V+K+LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 107 LTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSA 165
+ ++K V +A ADE GI F ETSAK ++NVE+ F ++A +IK ++ + ++ A
Sbjct: 132 MDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEPA 191
Query: 166 AESVQMKGQ-----PIQQNTNCCG 184
+ Q Q + CCG
Sbjct: 192 TIKISQTDQAAGAGQATQKSACCG 215
>At5g03520 GTP-binding protein - like
Length = 216
Score = 161 bits (408), Expect = 2e-40
Identities = 87/202 (43%), Positives = 128/202 (63%), Gaps = 26/202 (12%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFAKPPSCRL------------ 53
DYL KLL+IGDS VGKSCLLLRF+DD++ ++I+TIG+DF K + L
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDF-KIRTVELDGKRIKLQIWDT 71
Query: 54 -------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD 106
TIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ +V+K+LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKAD 131
Query: 107 LTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKM-----GSQPT 160
+ ++K V T +A ADE GI F ETSAK ++NVE F+++A +IK ++ ++P
Sbjct: 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQ 191
Query: 161 GSKSAAESVQMKGQPIQQNTNC 182
G K + +++ C
Sbjct: 192 GIKITKQDTAASSSTAEKSACC 213
>At3g53610 GTPase AtRAB8
Length = 216
Score = 160 bits (404), Expect = 5e-40
Identities = 87/204 (42%), Positives = 125/204 (60%), Gaps = 26/204 (12%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFAKPPSCRL------------ 53
DYL KLL+IGDS VGKSCLLLRF+D S+ ++I+TIG+DF K + L
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDF-KIRTIELDGKRIKLQIWDT 71
Query: 54 -------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD 106
TIT++YYRGA GI++VYDVTD SFNN++ W+ I+++A+ SV+K+LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD 131
Query: 107 LTDNK-LVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSA 165
+ ++K V +A ADE G+ F ETSAK ++NVE+ F ++A +IK ++ ++
Sbjct: 132 MDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQ 191
Query: 166 AESVQMKGQ-----PIQQNTNCCG 184
+ Q Q + CCG
Sbjct: 192 TIKINQSDQGAGTSQATQKSACCG 215
>At4g17170 GTP-binding RAB2A like protein
Length = 211
Score = 135 bits (341), Expect = 9e-33
Identities = 81/207 (39%), Positives = 114/207 (54%), Gaps = 29/207 (14%)
Query: 7 YLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL----- 53
YLFK +IIGD+ VGKSCLLL+F D + + TIGV+F KP ++
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 54 -----TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDLT 108
+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN +++ +L+GNKCDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 109 DNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKM--GSQPTGSKSAA 166
+ V T + FA E G+ F+E SAK + NVE+AF+ AA I K+ G ++S
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 167 ESVQMKGQP---------IQQNTNCCG 184
V G P Q CCG
Sbjct: 185 IKVGYGGIPGPSGGRDGSTSQGGGCCG 211
>At4g17160 GTP-binding RAB2A like protein
Length = 205
Score = 135 bits (341), Expect = 9e-33
Identities = 79/209 (37%), Positives = 114/209 (53%), Gaps = 39/209 (18%)
Query: 7 YLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL----- 53
Y FK +IIGD+ VGKSCLLL+F D + + TIGV+F KP ++
Sbjct: 5 YRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAG 64
Query: 54 -----TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDLT 108
++T SYYRG G ++VYD+T E+FN++ WL E ++A+ +++ +L+GNKCDL
Sbjct: 65 QESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLE 124
Query: 109 DNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGS----------- 157
D + V T + FA E G+ F+E SAK + NVE+AF+ AA I ++
Sbjct: 125 DKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEANEPGI 184
Query: 158 --QPTGSKSAAESVQMKGQPIQQNTNCCG 184
P G K A+ S Q +G CCG
Sbjct: 185 TPGPFGGKDASSSQQRRG--------CCG 205
>At3g07410 GTP-binding protein like
Length = 217
Score = 134 bits (338), Expect = 2e-32
Identities = 72/168 (42%), Positives = 108/168 (63%), Gaps = 18/168 (10%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
+YLFK+++IGDS+VGKS LL RF+ D +D +TIGV+F K ++
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+TS+YYRGA G +IVYD+T ++F +VK+WL E++ + + +V+++LVGNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKM 155
D + V KA A+E G+ F+ETSA D+ NV++AF + EI N +
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNV 177
>At4g35860 GTP-binding protein GB2
Length = 211
Score = 134 bits (337), Expect = 3e-32
Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 29/208 (13%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL---- 53
DYLFK +IIGD+ VGKSCLLL+F D + + TIGV+F +P ++
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTA 63
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN ++S +L+GNKCDL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDL 123
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAA-----------EIKNKMG 156
+ V + FA E G+ FLE SA+ + NVE+AF+ AA ++ N+
Sbjct: 124 AHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSNESS 183
Query: 157 SQPTGSKSAAESVQMKGQPIQQNTNCCG 184
G + + I Q CCG
Sbjct: 184 GIKIGYGRTQGAAGGRDGTISQGGGCCG 211
>At2g43130 Ras-related GTP-binding protein (ARA-4)
Length = 214
Score = 130 bits (326), Expect = 5e-31
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 18/194 (9%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
+YLFK++IIGDS+VGKS LL R+A + ++ +TIGV+F K ++
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+TS+YYRGA G ++VYD+T +F NV +WL E++ +++ +V+K+L+GNKCDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
+ V K+ A+ G+ F+ETSA DS NV+ AF + EI + + + S S E
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 189
Query: 168 SVQMKGQPIQQNTN 181
+ + + +N N
Sbjct: 190 ELTVNRVSLVKNEN 203
>At4g39990 GTP-binding protein GB3
Length = 224
Score = 128 bits (321), Expect = 2e-30
Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 28/206 (13%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL---- 53
DY+FK+++IGDS+VGKS LL RFA D + +TIGV+F K ++
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+TS+YYRGA G ++VYD+T E+F ++ +WL E+ +A+ ++ +L+GNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
D + V T AK FA++ G+ FLETSA ++ NVE +F T+ +I N + + S+ +
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 168 S----------VQMKGQPIQQNTNCC 183
+ + GQ I T+ C
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTSTC 220
>At5g65270 GTP-binding protein
Length = 226
Score = 125 bits (315), Expect = 1e-29
Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 22/188 (11%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL---- 53
DY+FK+++IGDS+VGKS +L R+A D + +TIGV+F K ++
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+TS+YYRGA G ++VYD+T ++F+++ +WL E+ +A+ ++ +L+GNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
D + + T AK FA++ G+ FLETSA ++ NVE AF T+ EI N + + AA
Sbjct: 135 VDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKK----SLAAS 190
Query: 168 SVQMKGQP 175
Q G P
Sbjct: 191 EDQENGNP 198
>At4g18800 ras-like GTP-binding protein
Length = 214
Score = 124 bits (312), Expect = 2e-29
Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 24/205 (11%)
Query: 3 DFSDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL- 53
D DYLFK+++IGDS VGKS LL RF + + STIGV+FA K ++
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIW 67
Query: 54 ---------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNK 104
ITS+YYRGA G ++VYDVT +F NV++WL E+ + + ++ +LVGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 105 CDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKS 164
DL V T AK+FA+ + F+ETSA +S NVE AF + +I + + + +
Sbjct: 128 SDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGE 187
Query: 165 AAESVQMKGQPIQ------QNTNCC 183
+ +V KG+ I + T CC
Sbjct: 188 DSGNVPSKGEKIDVDVSAVKKTGCC 212
>At5g47520 GTP-binding protein-like
Length = 221
Score = 124 bits (311), Expect = 3e-29
Identities = 72/176 (40%), Positives = 107/176 (59%), Gaps = 18/176 (10%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDF--------AKPPSCRL---- 53
DYLFK+++IGDS+VGKS LL RFA D + STIGV+F K ++
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
+TS+YYRGA G ++VYD++ ++F+++ +WL+E+ +++ +V +LVGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSK 163
D + V T KA A+ G+ F+ETSA DS NV AF T+ EI N + + S+
Sbjct: 132 KDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
>At1g09630 putative RAS-related protein, RAB11C
Length = 217
Score = 124 bits (311), Expect = 3e-29
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 19/190 (10%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL---- 53
DYLFK+++IGDS VGKS LL RF + + STIGV+FA + ++
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 69
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
ITS+YYRGA G ++VYDVT +F NV +WL E+ +A+ ++ +L+GNK DL
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDL 129
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
+ V T A+++A++ G+ F+ETSA +++NVE+AF T+ +E+ + + S
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTA 189
Query: 168 SVQMK-GQPI 176
+ +K GQ I
Sbjct: 190 NANIKEGQTI 199
>At1g06400 unknown protein
Length = 216
Score = 124 bits (311), Expect = 3e-29
Identities = 73/189 (38%), Positives = 105/189 (54%), Gaps = 18/189 (9%)
Query: 6 DYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFA--------KPPSCRL---- 53
DYLFKL++IGDS VGKS LL RF + ++ STIGV+FA K ++
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTA 70
Query: 54 ------TITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCDL 107
ITS+YYRGA G +++YDVT +F N +WL E+ + + ++ +L+GNKCDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDL 130
Query: 108 TDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTGSKSAAE 167
V T AKAFA+ + F+ETSA D+ NVE AF + +I + + +
Sbjct: 131 RHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESA 190
Query: 168 SVQMKGQPI 176
+ KG+ I
Sbjct: 191 DLPGKGETI 199
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,954,226
Number of Sequences: 26719
Number of extensions: 152710
Number of successful extensions: 646
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 105
length of query: 184
length of database: 11,318,596
effective HSP length: 93
effective length of query: 91
effective length of database: 8,833,729
effective search space: 803869339
effective search space used: 803869339
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC140549.10