BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140034.3 + phase: 0 
         (199 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g17930 unknown protein                                              56  1e-08
At2g25010 unknown protein                                              52  2e-07
At1g48120 serine/threonine phosphatase PP7, putative                   47  7e-06
At4g25960 P-glycoprotein-2 (pgp2)                                      29  1.4
At1g67220 hypothetical protein                                         29  1.4
At1g10680 putative P-glycoprotein-2 emb|CAA71277                       29  1.4
At3g53140 caffeic acid O-methyltransferase - like protein              27  7.1

>At1g17930 unknown protein
          Length = 478

 Score = 55.8 bits (133), Expect = 1e-08
 Identities = 43/173 (24%), Positives = 77/173 (43%), Gaps = 22/173 (12%)

Query: 2   PMGEMTVTLDDFACLTHLPIEGRMLDYEKKMPKHEGAALLMTYLGVSQHEAEKICNQEYG 61
           P GEMT+TLD+ + +  L ++G+ +   K+  +      L     + + E         G
Sbjct: 84  PCGEMTITLDEVSLILGLAVDGKPVVGVKEKDEDPSQVCLRLLGKLPKGELS-------G 136

Query: 62  GYISYPRLRDFYTSYLGRANVLAGTEDPEELEELARVRTYCVRWYLMYLVGCLLFDDRSN 121
             ++   L++ +      A +       +E+E       Y  R YL+Y+VG  +F     
Sbjct: 137 NRVTAKWLKESFAECPKGATM-------KEIE-------YHTRAYLIYIVGSTIFATTDP 182

Query: 122 KRIELIYLTTMADGYAGMRNYSWGGMTLAYLYGELADACRPGHRALGGSVTLL 174
            +I + YL    D +     Y+WG   LA+LY ++ +A +     +GG +TLL
Sbjct: 183 SKISVDYLILFED-FEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLL 234


>At2g25010 unknown protein
          Length = 509

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 21/175 (12%)

Query: 1   MPMGEMTVTLDDFACLTHLPIEGRMLDYEKKMPKHEGAALLMTYLGVSQHEAEKICNQEY 60
           +P+GEMT+TLD+ A +  L I+G  +   K      G  + M   G    +     N+E 
Sbjct: 92  LPLGEMTITLDEVALVLGLEIDGDPIVGSK-----VGDEVAMDMCGRLLGKLPSAANKE- 145

Query: 61  GGYISYPRLRDFYTSYLGRANVLAGTEDPEELE-ELARVRTYCVRWYLMYLVGCLLFDDR 119
              ++  R++    ++L R      +E PE+   ++ +  T   R YL+YL+G  +F   
Sbjct: 146 ---VNCSRVK---LNWLKR----TFSECPEDASFDVVKCHT---RAYLLYLIGSTIFATT 192

Query: 120 SNKRIELIYLTTMADGYAGMRNYSWGGMTLAYLYGELADACRPGHRALGGSVTLL 174
              ++ + YL    D +     Y+WG   LA LY  L +A       + G +TLL
Sbjct: 193 DGDKVSVKYLPLFED-FDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLL 246


>At1g48120 serine/threonine phosphatase PP7, putative
          Length = 1338

 Score = 47.0 bits (110), Expect = 7e-06
 Identities = 45/174 (25%), Positives = 74/174 (41%), Gaps = 23/174 (13%)

Query: 1   MPMGEMTVTLDDFACLTHLPIEGRMLDYEKKMPKHEGAALLMTYLGVSQHEAEKICNQEY 60
           +P GE+TVTL D   L  L ++G  +    K   +  A L    LG      +      +
Sbjct: 101 LPAGEITVTLQDVNILLGLRVDGPAVTGSTK---YNWADLCEDLLGHRPGPKDL-----H 152

Query: 61  GGYISYPRLRDFYTSYLGRANVLAGTEDPEELEELARVRTYCVRWYLMYLVGCLLFDDRS 120
           G ++S   LR+ + +            DP+E+      R +     ++ L+   L+ D+S
Sbjct: 153 GSHVSLAWLRENFRNL---------PADPDEVTLKCHTRAF-----VLALMSGFLYGDKS 198

Query: 121 NKRIELIYLTTMADGYAGMRNYSWGGMTLAYLYGELADACRPGHRALGGSVTLL 174
              + L +L  + D +  +   SWG  TLA LY EL  A +     + G + LL
Sbjct: 199 KHDVALTFLPLLRD-FDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLL 251


>At4g25960 P-glycoprotein-2 (pgp2)
          Length = 1233

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 24/72 (33%), Positives = 36/72 (49%), Gaps = 14/72 (19%)

Query: 40  LLMTY-LGVSQHEAEKICNQEYGGYISYPRLRDFYTSYLGRANVLAGTEDPEELEELARV 98
           +L TY L +S H +EK+  Q YGG        D   +YL +AN+LAG    E +  +  V
Sbjct: 818 VLATYPLVISGHISEKLFMQGYGG--------DLNKAYL-KANMLAG----ESVSNIRTV 864

Query: 99  RTYCVRWYLMYL 110
             +C    ++ L
Sbjct: 865 AAFCAEEKILEL 876


>At1g67220 hypothetical protein
          Length = 1357

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 30/139 (21%), Positives = 56/139 (39%), Gaps = 27/139 (19%)

Query: 62   GYISYPRLRDFYTSY-------LGRANVLAGTEDPEELEELARVRTYCVRWYLMYLVGCL 114
            GY+ Y +LR F TSY       +G+  ++      ++  +  ++R    +WY+  L    
Sbjct: 932  GYLEYCKLRGFTTSYIWACPPKIGQDYIMYSHPKTQQTPDTKKLR----KWYVSML---- 983

Query: 115  LFDDRSNKRIELIYLTTMADGYAGMRNYSWGGMTLAYLYGE---------LADACRPGHR 165
                ++ ++  ++ +T + D +            L Y  G          + D  R G+ 
Sbjct: 984  ---QKAAEQRVVMNVTNLYDRFFDSTEEYMTAARLPYFEGSFWSNRAEIMIQDIEREGNN 1040

Query: 166  ALGGSVTLLTVRKLKFYIY 184
             L   V LL+ RK+K   Y
Sbjct: 1041 ELQKKVKLLSRRKVKTMSY 1059


>At1g10680 putative P-glycoprotein-2 emb|CAA71277
          Length = 1227

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 21/120 (17%)

Query: 40  LLMTY-LGVSQHEAEKICNQEYGGYISYPRLRDFYTSYLGRANVLAGTEDPEELEELARV 98
           +L TY L +S H +EKI  Q YGG +S         +YL +AN+LAG    E +  +  V
Sbjct: 810 VLATYPLIISGHISEKIFMQGYGGNLS--------KAYL-KANMLAG----ESISNIRTV 856

Query: 99  RTYCVRWYLMYLVGCLLFD--DRSNKRIELIYLTTMADGYAGMRNYSWGGMTLAYLYGEL 156
             +C    ++ L    L +  +RS +R ++  +      Y   + + +    LA  YG +
Sbjct: 857 VAFCAEEKVLDLYSKELLEPSERSFRRGQMAGIL-----YGVSQFFIFSSYGLALWYGSI 911


>At3g53140 caffeic acid O-methyltransferase - like protein
          Length = 359

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 13/74 (17%)

Query: 15  CLTHLPIEGRMLDYEKKMPKH-----------EGAALLMT-YLGVSQHEAEKICNQEYGG 62
           C   LP+ G+++  E  +PK            EG   +MT Y    +H  E+    E G 
Sbjct: 278 CYNALPVGGKLIACEPVLPKETDESHRTRALLEGDIFVMTIYRTKGKHRTEEEF-IELGL 336

Query: 63  YISYPRLRDFYTSY 76
              +P  R FY  Y
Sbjct: 337 SAGFPTFRPFYIDY 350


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.142    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,513,188
Number of Sequences: 26719
Number of extensions: 184366
Number of successful extensions: 481
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 8
length of query: 199
length of database: 11,318,596
effective HSP length: 94
effective length of query: 105
effective length of database: 8,807,010
effective search space: 924736050
effective search space used: 924736050
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)