BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140025.16 - phase: 0 
         (801 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g20390 hypothetical protein                                        424  e-118
At3g31530 hypothetical protein                                        318  1e-86
At2g15410 putative retroelement pol polyprotein                       315  8e-86
At2g15100 putative retroelement pol polyprotein                       309  3e-84
At1g37200 hypothetical protein                                        240  3e-63
At2g14400 putative retroelement pol polyprotein                       219  5e-57
At2g06320 putative retroelement pol polyprotein                       201  1e-51
At1g37060 Athila retroelment ORF 1, putative                          198  9e-51
At2g13060 pseudogene                                                  189  7e-48
At2g13230 pseudogene                                                  187  2e-47
At1g36830 hypothetical protein                                        174  2e-43
At2g11940 putative retroelement gag/pol polyprotein                   171  1e-42
At2g13330 F14O4.9                                                     152  7e-37
At2g12040 T10J7.2                                                     121  2e-27
At2g07410 putative retroelement pol polyprotein                       112  8e-25
At4g04060 putative transposon protein                                 103  4e-22
At2g10690 putative retroelement pol polyprotein                        99  7e-21
At2g07660 putative retroelement pol polyprotein                        99  7e-21
At2g11680 putative retroelement pol polyprotein                        99  9e-21
At4g07610                                                              98  2e-20

>At1g20390 hypothetical protein
          Length = 1791

 Score =  424 bits (1089), Expect = e-118
 Identities = 272/793 (34%), Positives = 405/793 (50%), Gaps = 49/793 (6%)

Query: 19   LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
            L +     W+ + +EAF+ +K+YL  PPILV P  G  L LY++V D +V  VL ++D  
Sbjct: 1036 LKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRG 1095

Query: 79   GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
              ++  I+Y SK   + ETRY ++ K   A+  +A++LR Y  +HT  +++   P++   
Sbjct: 1096 --EQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQ-PLRVAL 1152

Query: 139  EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
                 +G++ +W + LSEYDI F+ + A+K  +LAD L   PL   +        EE   
Sbjct: 1153 HSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEE--- 1209

Query: 199  LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
                                W L  DG+ +A G GIG  +VS     +  + R+ F  TN
Sbjct: 1210 --------------------WSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATN 1249

Query: 259  NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
            N+AEYE  I G+  A  M+I  +  + DS L+  Q+ GE+E  + K+  Y    + +   
Sbjct: 1250 NVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKD 1309

Query: 319  FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVP-IIKVQRLERPS-----HVFAIGD 372
            F   +L  IPR +N  ADALA L+    +   +D+  II V+ +++PS      V  +  
Sbjct: 1310 FENFKLSKIPRGDNAPADALAALA----LTSDSDLRRIIPVESIDKPSIDSTDAVEIVNT 1365

Query: 373  VIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRL---ASRFLLDGDILYKR 429
            +      +  D   W  +I+ +L     PS     DK T RRL   A+++ L  + L K 
Sbjct: 1366 IRSSNAPDPADPTDWRVEIRDYLSDGTLPS-----DKWTARRLRIKAAKYTLMKEHLLKV 1420

Query: 430  NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARK 489
            +    +L C+   E  ++M + H+G  G H+ G  ++ KL + G+YW  M  DC     K
Sbjct: 1421 SAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAK 1480

Query: 490  CHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 549
            C +CQ +A  IH P   L    +P+PF  W +D++G +   AS   RFILV  DYFTKWV
Sbjct: 1481 CEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVGPMP--ASRQKRFILVMTDYFTKWV 1538

Query: 550  EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 609
            EA SY  +    V  F+   IICR+G+P +IITDNG+   +   +  C  +KI  + S+P
Sbjct: 1539 EAESYATIRANDVQNFVWKFIICRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTP 1598

Query: 610  YRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYG 668
              PQ NG  EA NK I   ++K +   K  W + L   L  YRTT RS+T  TPF+  YG
Sbjct: 1599 RYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYG 1658

Query: 669  MEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAF 728
            MEA+ P EV   SLR  M  K  E    +   D+L+ +EE R  A+ R Q+YQ      +
Sbjct: 1659 MEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHY 1717

Query: 729  DKKVHPREFKVGELVLKRRVSQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
            ++KVH R F VG+LVL++      +   GK   N+EG Y V K    G   L  M G  +
Sbjct: 1718 NQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAV 1777

Query: 788  PNPVNADIVKKYF 800
            P   N+  +K+Y+
Sbjct: 1778 PRTWNSMHLKRYY 1790


>At3g31530 hypothetical protein
          Length = 831

 Score =  318 bits (814), Expect = 1e-86
 Identities = 214/696 (30%), Positives = 336/696 (47%), Gaps = 109/696 (15%)

Query: 17  DCLSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQD 76
           D L +N+   W   C+EAF  +K YL  PPIL  PV G P  LY++V D +V   L ++D
Sbjct: 241 DVLRRNKKFEWTTRCEEAFQELKKYLATPPILAKPVIGEPQYLYVAVSDTAVSGELVRED 300

Query: 77  ETGKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKY 136
              +K   I+Y+S+ FT  E+RY  + K   A+  +A++LR Y  +H+  ++  M P++ 
Sbjct: 301 RGEQK--LIFYVSQTFTSAESRYPQMEKLALAVVMSAQKLRPYFQSHSIIVMGSM-PLRV 357

Query: 137 IFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEI 196
           I      +G++A+W + LSEYDI ++ +   K  +LAD                     I
Sbjct: 358 ILHSPSQSGRLAKWTIELSEYDIEYQNKTCAKSQVLADF--------------------I 397

Query: 197 MYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFEC 256
           + L +K+  E  +D      + W L  DG+ +  G G+G  + S  G           E 
Sbjct: 398 VELPTKEARENPLD------TTWLLHVDGSSSKQGSGVGIRLTSPTG-----------EA 440

Query: 257 TNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLL 316
           TNN+AEYEA + G+  A  ++I     + DS L+ NQ  GE+ T   K+  Y  + + L 
Sbjct: 441 TNNVAEYEALVAGLNLAWGLKIGKTRAFCDSQLIANQFNGEYTTQDKKMEAYLIHVQNLA 500

Query: 317 TYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQR----LERPSHVFAIGD 372
             F + EL  IPR EN  ADALA L+S    +    +P+  +++    L +  HV  I  
Sbjct: 501 KNFDEFELTRIPRGENTSADALAALASTSDTSLKRVIPVEFIEKPSIELGKEEHVLPIQI 560

Query: 373 VIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
             DQ   +  +   W   I  ++   + PS   K   + L+  A+RF+L    LYK    
Sbjct: 561 SADQDDPDDCN-SEWMEPIISYISEGKLPS--DKWKARKLKAQAARFVLVDTKLYKWRLS 617

Query: 433 MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
             L+ CV+     ++M ++H G+                                     
Sbjct: 618 GPLMTCVEAEAICKIMKEIHSGS------------------------------------- 640

Query: 493 CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
              +A  IH P   L+ I+SP+PF  W +D+IG + P  S   + +LV  DYF+KW+EA 
Sbjct: 641 ---HAPTIHQPAELLSSIASPYPFMRWSMDIIGPMHP--SKQKKLVLVLTDYFSKWIEAE 695

Query: 553 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
           SY ++    V  F+  +I+CR+G+P +I+TDNG+   +   Q  C+++ I    S+P  P
Sbjct: 696 SYASIKDAQVENFVLKHILCRHGIPYEIVTDNGSQFISTRFQGFCDKWGIRLSKSTPRYP 755

Query: 613 QMNGAVEAANKNIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 672
           Q NG  EAAN+                   L   L  +RTT R +T  TPF+ +YG E V
Sbjct: 756 QGNGQAEAANE-------------------LEGVLWLHRTTPRRATRETPFASIYGTECV 796

Query: 673 LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEE 708
           +P E+ +PSLR  +  + ++ +  Q+  D+L+LI+E
Sbjct: 797 IPAEMIVPSLRRSLSPE-NDPDNTQTPLDELDLIDE 831


>At2g15410 putative retroelement pol polyprotein
          Length = 1787

 Score =  315 bits (806), Expect = 8e-86
 Identities = 201/605 (33%), Positives = 296/605 (48%), Gaps = 66/605 (10%)

Query: 254  FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYAR 313
            F  +NN AEYEA I G+  A  + +K +  Y DS LV +Q  G +E  + ++  Y    R
Sbjct: 1190 FPASNNEAEYEALIAGLRLAHGIEVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVR 1249

Query: 314  RLLTYFTKVELHHIPRDENQMADALATLSSMFRVN-------HWNDVPIIKVQ-RLERPS 365
             L   F   EL  IPR +N  ADALA L+S    +          DVP IK+Q  + +PS
Sbjct: 1250 ELSYNFEVFELTKIPRSDNAPADALAVLASTSDPDLRRVIPVECIDVPSIKIQGTITKPS 1309

Query: 366  HVFAIGDVIDQAGENVVDYKP--------------------------------------- 386
                I    +Q    +V   P                                       
Sbjct: 1310 EYTVIDLTAEQLSIVMVILPPATDRSEDAGPSGNLVCSSDPGQSSGCDRSDDSNRSADSD 1369

Query: 387  ------WYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVD 440
                  W  +I+ ++  R  P    K   + LR  ++++ L  + L + +   VLL C+D
Sbjct: 1370 SPASTNWIEEIRSYIADRIVPK--DKWAARRLRARSAQYTLPHEHLLRWSATGVLLSCLD 1427

Query: 441  EHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKI 500
            + EA+Q+M ++H+G  G H+ G  ++ K+ + G YW  M  DC +   +C KCQ +A  I
Sbjct: 1428 DEEAQQVMREIHEGAGGNHSGGRALALKIRKHGQYWPTMNADCEKFVARCEKCQGHAPFI 1487

Query: 501  HVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQ 560
            H+P   L     P+PF  W +D+I      AS   ++ILV  DYFTKW EA SY  +  +
Sbjct: 1488 HIPSEVLQTAMPPYPFMRWAMDIIRPF--PASRQKKYILVMTDYFTKWFEAESYARIQSK 1545

Query: 561  VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEA 620
             V  F+  NIIC +G+P +I+TDNGT   +   +  C ++KI    S+P  PQ NG  EA
Sbjct: 1546 EVQNFVWKNIICHHGLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEA 1605

Query: 621  ANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 679
             NK I   ++K +   K  W + L   L  YRTT R ST  TPFSL YGMEA+ P E  +
Sbjct: 1606 TNKTILDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGL 1665

Query: 680  PSLR---VIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 736
            P++R   +I +  L++    Q   D L+ +EE+R  A+ R Q+YQ      ++KKV  R 
Sbjct: 1666 PTVRRSMLINDPTLND----QMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRL 1721

Query: 737  FKVGELVLKRRVSQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADI 795
            F  G+LVL++      +   GK   ++EGPY++ K    G   L  MDG  +P   N+  
Sbjct: 1722 FAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSAN 1781

Query: 796  VKKYF 800
            +K+Y+
Sbjct: 1782 LKRYY 1786



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 53   EGRPLILYLSVFDESVGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWA 112
            EG  L LY++V   +V  VL ++D    ++H I+Y+SK     E RY  L K   A+  +
Sbjct: 1055 EGETLYLYIAVSTSAVSGVLVREDRG--EQHPIFYVSKTLDGAELRYPTLEKLAFAVVIS 1112

Query: 113  AKRLRHYLVNHTTWLISRMDPIKYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIK 168
            A++LR Y  ++T  +++   P++ I      +G++A+W + LSEYDI +K +   K
Sbjct: 1113 ARKLRPYFKSYTVEVLTN-QPLRTILHSPSQSGRLAKWAVELSEYDIAYKNRTCAK 1167


>At2g15100 putative retroelement pol polyprotein
          Length = 1329

 Score =  309 bits (792), Expect = 3e-84
 Identities = 222/786 (28%), Positives = 376/786 (47%), Gaps = 98/786 (12%)

Query: 26   VWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDETGKKEHAI 85
            +WN+ C+EAF  +K YL EP +L     G  L LY++V + +V  V  + + + K+   I
Sbjct: 630  IWNESCEEAFKQLKRYLSEPSVLAKREFGEQLFLYIAVSESAVTGVQVRVERSDKR--PI 687

Query: 86   YYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVTG 145
            +Y+       +TRY M+ K   A+  AA++LR Y  +H   +++ + P++ I      +G
Sbjct: 688  FYV-------KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSL-PLRTILHSPTQSG 739

Query: 146  KIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCE 205
            ++ +W + LSE+D+ F+A+ ++  ++                ++ F      +++S++  
Sbjct: 740  RLGKWAIELSEFDLEFRARTSLNSTMDTSR------------QWGFIK---TWVRSRN-- 782

Query: 206  EPLIDEGPDPNSKWG--LVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTNNMAEY 263
               + + P  N   G     D  + AY      ++  + G    F    +    N+ A  
Sbjct: 783  ---LSDAPTANRYSGEYEAKDACMEAYLN----LVREVSGRFEQFELTRIPRAENSAANA 835

Query: 264  EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVE 323
             A +    E    R+  ++     ++ +++I           +  R   RRL     +  
Sbjct: 836  LAALASTFEVTLPRVIPVETISQPSIRLDEI---------SFVTTRAMRRRLDAQSAENG 886

Query: 324  LHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVD 383
            LH +  DE +++DA+                         P+ +     + D     + D
Sbjct: 887  LHQLGDDE-EISDAV------------------------HPTEIVENQSLPDNHNAPLPD 921

Query: 384  YKP------WYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLR 437
              P      W   I+ ++L+   P  A K   + L+   +RF +  DILY+R +      
Sbjct: 922  QPPHDWGADWREPIRDYILNGTLP--AEKWAARKLKATCARFCIANDILYRRIFSAPDAV 979

Query: 438  CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYA 497
            C+   +   +M +VHDGT G H  G +++ K+ + GYYW  +  DC  +ARKC +CQ +A
Sbjct: 980  CIFGEQTRTVMKEVHDGTCGNHTGGRSLAFKVRKYGYYWPTLVADCEAYARKCEQCQKHA 1039

Query: 498  DKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 557
              I  P   L  +S+P+PF  W +D++G +                  T+ VEAA+Y+N+
Sbjct: 1040 PLILQPAELLTTVSAPYPFMKWLMDIVGPLHVS---------------TRGVEAAAYSNI 1084

Query: 558  TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 617
            T   V  FI  +IICR+G+P +I+TDNG+   +   +  CEE++I   +S+P  PQ NG 
Sbjct: 1085 THVQVWNFIWKDIICRHGLPYEIVTDNGSQFISEQFEVFCEEWQIRLSHSTPRYPQGNGQ 1144

Query: 618  VEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 676
             EA NK I   ++K +  YK  W   L   L   RTT R +T  TPFSL+YGMEAV+P E
Sbjct: 1145 AEAMNKTIISNLKKKLNAYKGAWFGELQNVLWAVRTTPRRATDETPFSLIYGMEAVIPAE 1204

Query: 677  VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 736
            +++PS R I   + +E E  +   D ++ I+E+R  A+AR Q+Y       ++  V  R 
Sbjct: 1205 IKVPSARRIRNPQ-NETENNEMIIDVIDTIDERRNRALARMQNYHNAGARYYNSNVRNRS 1263

Query: 737  FKVGELVLKRRVSQQPDPR--GKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 794
            F+VG LVL RRV Q    +  GK   ++EGPY +      G   L +M+G  +    N+ 
Sbjct: 1264 FEVGTLVL-RRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSM 1322

Query: 795  IVKKYF 800
             +K+++
Sbjct: 1323 HLKRFY 1328


>At1g37200 hypothetical protein
          Length = 1564

 Score =  240 bits (612), Expect = 3e-63
 Identities = 168/555 (30%), Positives = 259/555 (46%), Gaps = 91/555 (16%)

Query: 76   DETGKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIK 135
            D  G+K   IYY+SK   D ET Y  + K   A+  +A++LR YL +H   ++    PI+
Sbjct: 927  DHEGQKP--IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPI-VVMTSQPIR 983

Query: 136  YIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEE 195
             I      + ++A+W + LSEYDI ++ + + K  +LAD +   PL D            
Sbjct: 984  TILHSTTQSSRLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADL----------- 1032

Query: 196  IMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFE 255
                           +G + N KW L  DG+ N  G G G  + S  G  I  + R+ F 
Sbjct: 1033 ---------------DGTNSNKKWLLHVDGSSNRQGSGEGIQLTSPTGEVIEQSFRLGFN 1077

Query: 256  CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRL 315
             +NN +EYEA I GI+ A  MRI+ +  + DS LV +Q  GE+E    ++  Y +  + L
Sbjct: 1078 ASNNESEYEALIDGIKLAQGMRIRDIHAHSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 1137

Query: 316  LTYFTKVELHHIPRDENQMADALATLSSMFR--VNHWNDVPIIKVQRLERPSHVFAI--- 370
               F   EL  IPR EN   DALA L+S     V       II V+ +E PS    +   
Sbjct: 1138 TQQFESFELTRIPRGENTSTDALAALASTLDPFVKR-----IIPVEGIEHPSIDLTVKHA 1192

Query: 371  ------------------------------GDVIDQA----GENVVDYKPWYYDIKQFLL 396
                                          G   ++A     E +  Y+P  Y+  +  +
Sbjct: 1193 GMETSATCNFTRVTRSTTAAARALAAAAEAGAAEEEAKLRTPEQLASYEPEPYNDWRIPI 1252

Query: 397  SREYPSGASKQDKKTLRRL---ASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHD 453
                  G +  DK   R+L   ++R+ +    L KR+     + C    + + LM  +H+
Sbjct: 1253 IDYIERGITPPDKWETRKLKAQSARYCIMEGRLMKRSVAGPYMVCTYGQQTKDLMKSMHE 1312

Query: 454  GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSP 513
            G  G+H +G T+   +L           DC  H+ +C KCQ +A  +H PP  ++ ISSP
Sbjct: 1313 GQCGSHYSGRTLRCIMLA----------DCIAHSLRCDKCQRHAPTLHQPPEEMSSISSP 1362

Query: 514  WPFSMWGIDMIGRIEPKASNGH---RFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNI 570
            +PF  W +D++  +E  AS G    + +LV  DY TKW+E  ++  VT++ V  F+  NI
Sbjct: 1363 YPFMKWSMDVVRPME--ASGGKKRLKNLLVLTDYSTKWIEGKAFQQVTEKQVEVFLLENI 1420

Query: 571  ICRYGVPSKIITDNG 585
            + R+G+P +I+TDNG
Sbjct: 1421 VYRHGIPYEIVTDNG 1435



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 34/98 (34%), Positives = 52/98 (52%), Gaps = 2/98 (2%)

Query: 704  NLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPD-PRGKWTPNY 762
            + I+E+R  AM + Q+YQ      ++  +  R F+VGELVL++  S   +   GK   N+
Sbjct: 1465 DFIDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNW 1524

Query: 763  EGPYVVKKAFSGGALILTHM-DGVELPNPVNADIVKKY 799
            EGPY + +    G   L  + +GV    P NA  +KKY
Sbjct: 1525 EGPYRITEVVRDGIYKLVKVFNGVPELRPWNAMHLKKY 1562


>At2g14400 putative retroelement pol polyprotein
          Length = 1466

 Score =  219 bits (558), Expect = 5e-57
 Identities = 164/535 (30%), Positives = 254/535 (46%), Gaps = 74/535 (13%)

Query: 289  LVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMF--R 346
            +++NQ  G++E   +++  Y    + L   F K EL  IPR +N  ADALA L+S     
Sbjct: 790  IIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKFELIRIPRGQNTTADALAALASTSDPE 849

Query: 347  VNHWNDVPIIKVQRLERPSHVFAI----------GD-------VIDQAGENVVDYKPWYY 389
            VN    V  I  + ++     F +          GD       V  +  +     KP   
Sbjct: 850  VNSIIPVECISERSIKEEKEAFVVTRSRAAARDRGDTAVELPPVKRRKSKEATVPKPAVQ 909

Query: 390  DIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGD--------ILYKRNYDMVLLRCVDE 441
            +     L  E  S A K + +T   +    L   +         LY+R      L  +  
Sbjct: 910  ENIGIELIEEVISDA-KIEAETEPWVDEDILAPNEHPEPEALNSLYRRGVSDPYLLSIFG 968

Query: 442  HEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIH 501
               E +M +VH+G  G+H++G  M+ K+ +  YYW  M  DC ++A++C +CQ++A  IH
Sbjct: 969  PVVEIVMSEVHEGLCGSHSSGRAMAFKIKKMCYYWPTMITDCVKYAQRCKRCQLHAPLIH 1028

Query: 502  VPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 561
             P    + IS+P+PF  W +D+IG +  +++ G +++LV  DYF+KW+EA +        
Sbjct: 1029 QPSELFSSISAPYPFMRWSMDIIGPLH-RSTRGVQYLLVLTDYFSKWIEAEA-------- 1079

Query: 562  VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 621
                    I+  +G+                        K+ +  S+   PQ NG  EAA
Sbjct: 1080 --------ILLNWGI------------------------KVSY--STLRYPQGNGQAEAA 1105

Query: 622  NKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIP 680
            NK I   ++K +   K  W++ L   L  YRTT R STG TPFSLVYGM+AV+P E+ +P
Sbjct: 1106 NKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTGETPFSLVYGMKAVVPAELNVP 1165

Query: 681  SLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVG 740
             LR   EA L+E E      D L+ I E+R  A+ + Q+YQ      ++ KV  R F VG
Sbjct: 1166 GLR-RTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAARYYNSKVKSRPFFVG 1224

Query: 741  ELVLKRRV-SQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 794
            + VLKR   +++ +  GK   N+EGPY+V +    G   L  ++   +  P N +
Sbjct: 1225 DYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLEDRPVQRPWNVN 1279



 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 27/70 (38%), Positives = 42/70 (59%), Gaps = 2/70 (2%)

Query: 19  LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
           L  N+  +W+++C+EAF  +K YL  PP+L  P     L LY+SV + +V  VL ++D  
Sbjct: 723 LKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVSNHAVSGVLIREDRG 782

Query: 79  GKKEHAIYYL 88
            +K   IYY+
Sbjct: 783 EQK--PIYYI 790


>At2g06320 putative retroelement pol polyprotein
          Length = 466

 Score =  201 bits (511), Expect = 1e-51
 Identities = 143/438 (32%), Positives = 215/438 (48%), Gaps = 12/438 (2%)

Query: 367 VFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDIL 426
           +F+IG    Q    V    PWY D   +L     P   +  ++K   R    +  D   L
Sbjct: 20  LFSIGKEFHQLNA-VEGGSPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYL 78

Query: 427 YKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQ 485
           Y    D +    V E E E ++   HD  +G H AT  T+S K+L+AG++W  M  D  +
Sbjct: 79  YTLCKDKIYRSYVSEDEVEGILLHCHDSAYGGHFATFKTVS-KILQAGFWWPTMFKDAQE 137

Query: 486 HARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 545
              KC  CQ   +         N I     F +WGID +G     +S G+++ILV +DY 
Sbjct: 138 FVSKCDSCQRKGNISRRNEMPQNPILEVDIFDVWGIDFMGPFP--SSYGNKYILVVVDYV 195

Query: 546 TKWVEA-ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEH 604
           +KWVEA AS TN  K VV K  K  I  R+GV   +I+D G +  N V + L ++  ++H
Sbjct: 196 SKWVEAIASPTNDAK-VVLKLFKTIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKH 254

Query: 605 HNSSPYRPQMNGAVEAANKNIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPF 663
             ++PY PQ +G VE +N+ IK I++K V  T KDW   L  AL  Y+T  ++  G TPF
Sbjct: 255 KVATPYHPQTSGQVEISNREIKTILEKTVGITRKDWSTKLDDALWAYKTAFKTPIGTTPF 314

Query: 664 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQAR 723
           +L+      L +E+E  ++  +           + R  QL+ ++E R++A    + Y+ R
Sbjct: 315 NLLCVKSCHLHVELEYKAMWAVKLLNFDIKTAEEKRLIQLSELDEIRLEAYESSKIYKER 374

Query: 724 MKTAFDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMD 783
            K   DKK+  ++F+VG+ VL      +  P GK    + GP+ + +    GA+ L    
Sbjct: 375 TKLFHDKKIITKDFQVGDQVLLFNSRLKIFP-GKLKSRWSGPFCITEVRPYGAVTLAGKS 433

Query: 784 GVELPNPVNADIVKKYFA 801
           GV     VN   +KKY A
Sbjct: 434 GV---FTVNGQRLKKYLA 448


>At1g37060 Athila retroelment ORF 1, putative
          Length = 1734

 Score =  198 bits (504), Expect = 9e-51
 Identities = 141/417 (33%), Positives = 206/417 (48%), Gaps = 39/417 (9%)

Query: 386  PWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAE 445
            PWY D   +L+S E P   S  +KK   +  + F  D   LY    D +   CV E E E
Sbjct: 1334 PWYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIE 1393

Query: 446  QLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPP 504
             ++   H   +G H AT  TMS K+L+AG++W +M  D  +   KC   +          
Sbjct: 1394 GILLHCHGFAYGGHFATFKTMS-KILQAGFWWPSMFKDAQEFISKCDSFE---------- 1442

Query: 505  HALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA-ASYTNVTKQVVA 563
                       F +WGID +G     +S G+++ILVAIDY +KWVEA AS+TN   +VV 
Sbjct: 1443 ----------NFDVWGIDFMGPF--PSSYGNKYILVAIDYVSKWVEAIASHTN-DARVVL 1489

Query: 564  KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 623
            K  K  I  R+GVP  +I+D G +  N   + L ++  ++H  S        G VE +N+
Sbjct: 1490 KLFKTIIFPRFGVPRIVISDGGKHFINKGFENLLKKHGVKHKTS--------GQVEISNR 1541

Query: 624  NIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 682
             IK I++K V +T KDW   L   L  YRT  ++  G TPF+L+YG    LP+E+E  ++
Sbjct: 1542 EIKAILEKTVGSTRKDWSAKLNDTLWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAM 1601

Query: 683  RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 742
              +           + R  QLN + + R++A    + Y+ R K+  DKK+  R+FKVG+ 
Sbjct: 1602 WAVKLLNFDIKTAEEKRLIQLNDLNKIRLEAYESSKIYKERTKSFHDKKIVSRDFKVGDQ 1661

Query: 743  VLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 799
            VL      +  P GK    + GP+ V      GA+ L   +G      VN   +KKY
Sbjct: 1662 VLLFNSRLRLFP-GKLKSRWSGPFSVTAVRPYGAITLAGKNG---DFTVNGQRLKKY 1714



 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 31/182 (17%)

Query: 19   LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
            L K     ++DEC  AF  IK  L+  PI+  P    P  +                   
Sbjct: 1176 LCKETEFAFDDECLTAFKLIKEALITAPIVQAPNWDFPFEIIT----------------- 1218

Query: 79   GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
                           D + RY    K   A+ +A ++ R YLV     + +    +++I+
Sbjct: 1219 -------------MDDAQVRYATTEKELLAVVFAFEKFRSYLVGSKVTIYTDHAALRHIY 1265

Query: 139  EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
             K     ++ RW +LL E+D+    +K I+  + ADHL+   ++D   I+   P+E++M 
Sbjct: 1266 AKKDTKPRLLRWILLLQEFDMEIVDKKGIENGV-ADHLSRMRIEDEVLIDDSMPEEQLMA 1324

Query: 199  LK 200
            ++
Sbjct: 1325 IQ 1326


>At2g13060 pseudogene
          Length = 930

 Score =  189 bits (479), Expect = 7e-48
 Identities = 117/368 (31%), Positives = 186/368 (49%), Gaps = 18/368 (4%)

Query: 383 DYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEH 442
           DY PWY DI  +L +   P   +  +KK   R   R+  D   LYK +YD +  RC+   
Sbjct: 135 DY-PWYADIVNYLAADVEPDNFTDYNKKRFLREIRRYQWDEPYLYKHSYDGIYRRCIAAT 193

Query: 443 EAEQLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQI---YAD 498
           E   ++   H  ++G H AT  T+S K+L+A ++W  M  D  +   +C  CQ     + 
Sbjct: 194 EVPSILSHCHSSSYGGHFATFKTVS-KVLQADFWWPTMFRDTQKFISQCDPCQRRGKISK 252

Query: 499 KIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 558
           +  +PP+    +     F  WGID +G   P  SN + +ILV +DY +KWVEA +     
Sbjct: 253 RNEMPPNFRLEVEV---FDRWGIDFMGPFPP--SNKNLYILVDVDYVSKWVEAIASLKND 307

Query: 559 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 618
             VV K  K+ I  R+GVP  +I+D   +  N +++ L  ++ ++H  ++PY PQ +G V
Sbjct: 308 SAVVMKLFKSIIFPRFGVPRIVISDGDKHFINKILEKLLLQYGVQHRVATPYHPQTSGQV 367

Query: 619 EAANKNIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 677
           E +N+ IK I++K V    K+W   L  AL  Y+T  ++  G TPF L+YG    LP+E+
Sbjct: 368 EVSNRQIKEILEKTVGKAKKEWSYKLYDALWAYKTAFKTPLGTTPFHLLYGKACHLPVEL 427

Query: 678 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 737
           E  +   +           +S  D++      R+ A    + Y+ R K   DKK+  R F
Sbjct: 428 EHKAAWAVKMMNFDIKSAGESELDEI------RIHAYDNSKLYKERTKAYHDKKILTRTF 481

Query: 738 KVGELVLK 745
           +  + +L+
Sbjct: 482 EPNDQILR 489



 Score = 36.6 bits (83), Expect = 0.057
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 150 WQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYL 199
           W +LL E+DI  + +K ++  + ADHL+   +DD  PI  DF  EE +Y+
Sbjct: 13  WILLLQEFDIEVRDKKGVENGV-ADHLSRIRIDDDVPIN-DFLPEENIYM 60


>At2g13230 pseudogene
          Length = 353

 Score =  187 bits (476), Expect = 2e-47
 Identities = 123/368 (33%), Positives = 194/368 (52%), Gaps = 29/368 (7%)

Query: 303 AKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQR-- 360
           A L   +D+A++    F + +L  IPR EN  ADALA L+S   +N    +P+  +++  
Sbjct: 3   AYLALVQDHAKQ----FHEFKLTRIPRGENTSADALAALASTSDLNMRRVIPVEFIEKPS 58

Query: 361 --LERPSHVFAIGDVIDQAGENVVDYKP-------WYYDIKQFLLSREYPSGASKQDKKT 411
             L++  H F I  V     E+  D  P       W   I+ F+  R+      K + + 
Sbjct: 59  IELDKVEHAFPIQVVAGY--EDASDNSPSLGCDSEWIEPIRNFISKRKVR--LDKWEARK 114

Query: 412 LRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLR 471
           L+  A+RF+L  + L+K      L+ CV++  A ++M +VH G+ G ++ G  ++ K+ R
Sbjct: 115 LKAEAARFVLVEEKLFKWRLSGPLMTCVEKEAARKVMKEVHGGSCGNNSGGRALAIKIKR 174

Query: 472 AGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKA 531
            GY+W  M  DC        KCQ  A  IH+P   L+ I+SP+P   W +D+IG +   A
Sbjct: 175 LGYFWPTMIKDC-------EKCQRNAPTIHLPAELLSSIASPYPLMRWSMDIIGPMH--A 225

Query: 532 SNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNN 591
           S   + +LV  DYF+K  EA SY ++ +  V  F+  +I+CR+GVP +I+TDNG+   + 
Sbjct: 226 SKQKKLVLVLTDYFSKLREAESYASIKEAQVESFMWKHILCRHGVPYEIVTDNGSQFIST 285

Query: 592 VVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYK-DWHEMLPYALHGY 650
             Q  C+++ I    S+P   Q NG  +AANK I   ++K +T  K  W + L   L  +
Sbjct: 286 RFQGFCDKWGIRLSKSTPRYLQGNGQADAANKTILDGLKKRLTAKKGSWVDELEGVLWSH 345

Query: 651 RTTVRSST 658
           RTT R +T
Sbjct: 346 RTTPRRAT 353


>At1g36830 hypothetical protein
          Length = 243

 Score =  174 bits (440), Expect = 2e-43
 Identities = 96/230 (41%), Positives = 145/230 (62%), Gaps = 7/230 (3%)

Query: 521 IDMIGRIEPKASNGHRFI---LVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVP 577
           +D++G +E  AS G + +   LV  DY TKW+EA ++  VT++ V  F+  NI+C++G+P
Sbjct: 1   MDVVGPME--ASGGKKKLKNLLVLTDYSTKWIEAKAFQQVTEKQVEDFLWENIVCQHGIP 58

Query: 578 SKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYK 637
            +IITDNGTNL +  ++A C+++KI    S+P+ PQ NG  EAANK I   ++K++ + K
Sbjct: 59  YEIITDNGTNLTSRKIKAFCDKWKIRLTTSTPHYPQGNGQAEAANKAILSNIKKILDSKK 118

Query: 638 D-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWC 696
             W ++L   L  YRTT R ST  TPFSL YG+EAV+P+   IPS+R       S+    
Sbjct: 119 SMWSDVLHGVLWAYRTTPRKSTQETPFSLAYGLEAVIPIVTIIPSVRRTASHANSDMN-T 177

Query: 697 QSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKR 746
           Q   D ++ I+E+R  AM R Q+YQ  +   ++  +  R F+VGELVL++
Sbjct: 178 QMLRDNMDFIDERRDQAMIRVQNYQQAVTRYYNSNIKIRRFEVGELVLRK 227


>At2g11940 putative retroelement gag/pol polyprotein
          Length = 1212

 Score =  171 bits (433), Expect = 1e-42
 Identities = 144/550 (26%), Positives = 238/550 (43%), Gaps = 115/550 (20%)

Query: 288  ALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSM--- 344
            A   +   G++E    ++  Y D  R L   F K EL  +PR EN  ADALA L+S    
Sbjct: 740  ATTASDYSGDYEAKDNRMEAYLDLLRELAEKFEKFELIKVPRAENSAADALAALASTPEI 799

Query: 345  ---------------FRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQ----------AGE 379
                            R+   N V     ++LE  ++   +  + D+          A E
Sbjct: 800  TVRRIISVETIAQPNIRIEEINFVTRAMRRQLEVQANNPELQQLHDEDEIPEAVPLVADE 859

Query: 380  NVVDYK-------PWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
            +  +Y         W   I+ ++ +   P+   K + + L+   +RF L  DILY+R   
Sbjct: 860  DSTEYNLPHDWGADWREPIRNYIFNGVLPT--DKWEARKLKATCARFCLADDILYRRIIS 917

Query: 433  MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
                 C+   +   ++ ++HDGT G H+ G +++ KL + GY+W  M  DC  +A +  +
Sbjct: 918  APDAICIFGEQTRTVIKEIHDGTCGNHSGGRSLAFKLKKYGYFWPTMVADCEAYAHRSRR 977

Query: 493  CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
                           +   SP PF  W +D++G +   ++ G RF+L+      +WVEAA
Sbjct: 978  -------------TFHFGISPLPFMKWSMDIVGPLH-VSTRGVRFLLL------EWVEAA 1017

Query: 553  SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
            +Y+ +T+  V  FI   IICR+G+P +I+TDNG    +   +A   E++I  + S+P  P
Sbjct: 1018 AYSYITQVQVRHFIWKEIICRHGLPYEIVTDNGPQFISEQFKAFYAEWQIRLNRSTPRYP 1077

Query: 613  QMNGAVEAANKNIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 672
            Q  G VEA                                                   V
Sbjct: 1078 Q--GNVEA---------------------------------------------------V 1084

Query: 673  LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 732
            +P E+++P  R I   K +EA   +   D ++ I+E+R  A+ R Q+Y       ++  V
Sbjct: 1085 IPAEIKVPRTRRIRNPK-NEAANNKMMVDVIDTIDERRNRALVRMQNYHNAAAQYYNSNV 1143

Query: 733  HPREFKVGELVLKRRVSQQPDPR--GKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNP 790
              R F VG LVL RR+ Q    +  GK   ++EGPY +      G  ++ +M+G  +   
Sbjct: 1144 RSRSFDVGTLVL-RRIHQNTAEKGAGKLGISWEGPYKITHIVRNGDCLI-NMEGKTVRRA 1201

Query: 791  VNADIVKKYF 800
             NA  +K+++
Sbjct: 1202 WNAAHLKRFY 1211



 Score =  116 bits (290), Expect = 6e-26
 Identities = 59/160 (36%), Positives = 99/160 (61%), Gaps = 3/160 (1%)

Query: 22  NQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDETGKK 81
           N+  VW++ C+EAF  +K+YL EP +L  P  G  L LY+SV + ++  VL + + +   
Sbjct: 583 NKGFVWDERCEEAFRQLKSYLSEPLVLAKPEFGERLFLYISVSENAISGVLVRVERS--D 640

Query: 82  EHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 141
           E  I+Y+SK F+D ETRY M+ K   A+  AA++LR Y  +H   +++ + P++ I    
Sbjct: 641 ERPIFYVSKSFSDVETRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSL-PLRTILHSP 699

Query: 142 VVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPL 181
             +G++A+W + LSE+++ F A+ ++K  +LAD L   PL
Sbjct: 700 NQSGRLAKWAIELSEFNLEFHARTSLKSQVLADFLIELPL 739


>At2g13330 F14O4.9
          Length = 889

 Score =  152 bits (384), Expect = 7e-37
 Identities = 96/325 (29%), Positives = 147/325 (44%), Gaps = 59/325 (18%)

Query: 19  LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
           L K +   WN +C++AF  +K YL EPPIL  P +G PL LY                  
Sbjct: 502 LRKGKEFDWNKDCEQAFKQLKAYLTEPPILAKPEKGEPLYLY------------------ 543

Query: 79  GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
                         T+ + R   + K    +  + ++LR Y  +H   ++    PI+ I 
Sbjct: 544 --------------TNRDKRCPAMEKLALTVVMSVRKLRLYFQSHPI-VVMTSQPIRTIL 588

Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
                +G++A+W + L EYDI ++ + ++K  +LAD +   PL D               
Sbjct: 589 HSLTQSGRLAKWAIELREYDIEYRTRTSLKAQVLADFVIKLPLADL-------------- 634

Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
                       +G + N KW L  DG+ N  G G+G  + S  G  I  + ++ F  +N
Sbjct: 635 ------------DGTNSNKKWLLHVDGSSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASN 682

Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
           N +EYEA I GI+ A +  I+ +  Y DS LV +Q  GE+E    ++  Y +  + L   
Sbjct: 683 NESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDERMEAYLELVKTLAQQ 742

Query: 319 FTKVELHHIPRDENQMADALATLSS 343
           F   +L  IPR EN  AD LA L+S
Sbjct: 743 FESFKLTRIPRGENTSADTLAALAS 767


>At2g12040 T10J7.2
          Length = 976

 Score =  121 bits (303), Expect = 2e-27
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 22/243 (9%)

Query: 516 FSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYG 575
           F  WGI+ +G I P  SN + +ILV +DY +KWVEA +       VV K  K  I   +G
Sbjct: 569 FDCWGINFMGPIPP--SNKNLYILVVVDYVSKWVEAIASPKNDSAVVMKLFKCIIFPHFG 626

Query: 576 VPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTT 635
           VP  +I+D G +  N ++  L  ++ ++H  ++PY PQ +G VE +N+ IK I++K V  
Sbjct: 627 VPRIVISDGGKHFINKILTKLLLQYGVQHRVATPYHPQTSGQVEVSNRQIKEILEKTV-- 684

Query: 636 YKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEW 695
                              ++  G TPF L+YG    LP+E+E  +   +          
Sbjct: 685 -----------------AFKTPLGTTPFHLLYGKACHLPVELEHKAAWTVKMLNFDIKSA 727

Query: 696 CQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQP-DP 754
            + R  QLN ++E ++ A    + Y+ R K   DKK+  R F+  +   K+    +P   
Sbjct: 728 GERRLIQLNELDEIQIHAYDNSKLYKERTKAYHDKKILTRTFEPKDQKKKKTRETKPFKG 787

Query: 755 RGK 757
           RGK
Sbjct: 788 RGK 790



 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 61/181 (33%), Positives = 93/181 (50%), Gaps = 4/181 (2%)

Query: 19  LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
           L K     +  EC +AF  IK  L+  PI+ PP    P  +     D +VG VLGQ+ + 
Sbjct: 203 LCKEVKFEFTQECHDAFQQIKQALISAPIVQPPDWDLPFEVMCDASDFAVGAVLGQRKD- 261

Query: 79  GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
            KK HAIYY S+   D +  Y    K   A+ +A ++ R YLV     + +    +KY+ 
Sbjct: 262 -KKLHAIYYASRTLDDAKRNYATTEKEFLAVVFAFEKFRSYLVGLKVIVHTDHAALKYLM 320

Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
           +      ++ RW +LL E+DI  + +K ++  + ADHL+   +DD  PI  DF  EE +Y
Sbjct: 321 QNKDAKPRLLRWILLLQEFDIEVRDKKGVEKCV-ADHLSRIRIDDDVPIN-DFLPEENIY 378

Query: 199 L 199
           +
Sbjct: 379 M 379


>At2g07410 putative retroelement pol polyprotein
          Length = 411

 Score =  112 bits (280), Expect = 8e-25
 Identities = 68/202 (33%), Positives = 112/202 (54%), Gaps = 9/202 (4%)

Query: 531 ASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNN 590
           +S G+++ILVA+DY +KWVEA        +VV K  K  I  R+GV   +I+D   +  N
Sbjct: 6   SSYGNKYILVAVDYVSKWVEAIVSPTNDAKVVLKLFKTIIFTRFGVHMVVISDGRKHFIN 65

Query: 591 NVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMV-TTYKDWHEMLPYALHG 649
              + L ++  ++H  ++ Y PQ +G VE +N+ IK I++K V  T KD    L  AL  
Sbjct: 66  KAFENLLKKHGVKHKVATSYHPQTSGQVEISNREIKAILEKTVGVTRKDLSAKLDDALWA 125

Query: 650 YRTTVRSS----TGATPFSLVYGMEAVLPLEVEIPSLRVI--MEAKLSEAEWCQSRYDQL 703
           Y+T  +++     G TPF+L+Y     LP+E+E  ++  +  M   +  AE  + R  QL
Sbjct: 126 YKTAFKTAFKTPIGTTPFNLLYAKSGHLPIELEFKAMWAVKLMNFDIKTAE--EERLIQL 183

Query: 704 NLIEEKRMDAMARGQSYQARMK 725
           N ++E R++A    ++Y+ + K
Sbjct: 184 NDLDEIRLEAYESSKNYKGKRK 205


>At4g04060 putative transposon protein
          Length = 375

 Score =  103 bits (257), Expect = 4e-22
 Identities = 54/148 (36%), Positives = 85/148 (56%), Gaps = 18/148 (12%)

Query: 462 GHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGI 521
           G  M R ++  GY+W  M  +C  H+ +C KCQ +A  +H  P  ++ ISSP+PF  W +
Sbjct: 186 GRLMKRSVV--GYFWPTMLANCIAHSLRCDKCQRHAPTLHQLPKEMSSISSPYPFMKWSM 243

Query: 522 DMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKII 581
           D++G +E  AS G + +   +              VT++ V  F+  NI+CR+G+P +II
Sbjct: 244 DVVGPME--ASGGKKKLKNLL--------------VTEKQVEDFLWENIVCRHGIPYEII 287

Query: 582 TDNGTNLNNNVVQALCEEFKIEHHNSSP 609
           TDNGTNL +  ++A C++ KI    S+P
Sbjct: 288 TDNGTNLTSGKIKAFCDKCKIRLTISTP 315



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 33/94 (35%), Positives = 47/94 (49%), Gaps = 11/94 (11%)

Query: 276 MRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMA 335
           M I+ +  + DS LVI+Q  GE+E    ++  Y +  + L   F   EL  IPR EN  A
Sbjct: 1   MGIRDIHAHSDSQLVISQFHGEYEAKDERMEAYLELVKTLTQQFESFELTMIPRGENTSA 60

Query: 336 DALATLSSMFRVNHWNDVPIIK----VQRLERPS 365
           DALA L+       +   P +K    V+ +E PS
Sbjct: 61  DALAALA-------YTSDPFVKRIIPVEGIEHPS 87


>At2g10690 putative retroelement pol polyprotein
          Length = 622

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 19  LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
           L K     ++++C +AF  IK  L+  PI   P    P  +    FD +VG VL Q+ + 
Sbjct: 312 LCKETEFNFDEDCLKAFHLIKETLVSAPIFQAPNWDHPFEIMCDAFDYAVGAVLDQKIDD 371

Query: 79  GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
             K H IYY S+   + +TRY  + K   A+ +A +++R YLV     +      +++I+
Sbjct: 372 --KLHVIYYASRTMDEAQTRYATIEKELLAVVFAFEKIRSYLVGFKVKVYIDHAALRHIY 429

Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
            K     ++ RW +LL E+D+    +K ++  + ADHL+   ++D  PI+   P+E++M+
Sbjct: 430 AKKETKSRLLRWILLLQEFDMEIIDKKGVENGV-ADHLSRMRIEDSVPIDDTMPEEQLMF 488



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 615 NGAVEAANKNIKRIVQKMVTTYK-DWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVL 673
           +G VE +N+ +K I+ K+V   K DW   L   L  YRT  ++  G TPF ++YG    L
Sbjct: 525 SGQVEVSNRQMKDILTKVVGVSKRDWSTKLDETLWAYRTAYKTPIGRTPFQMLYGKSCHL 584

Query: 674 PLEVEIPSL 682
           P+EVE  ++
Sbjct: 585 PVEVEYKAI 593


>At2g07660 putative retroelement pol polyprotein
          Length = 949

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 22/340 (6%)

Query: 438 CVDEHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQI 495
           CV    A  E+++ + H   F  H   + M R L R  Y+W+ M  D  +   KC  CQ+
Sbjct: 544 CVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMRKDVARWVAKCPTCQL 602

Query: 496 YADKIHVPPHAL-NVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
              +  VP   L N+  S W +    +D + R+     + H  + V +D  TK     + 
Sbjct: 603 VKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSAHFMAI 662

Query: 555 TNVT-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQ 613
           ++    +++A+   + I+  +G+P  I++D  T   +    A  +      + S+ Y PQ
Sbjct: 663 SDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQ 722

Query: 614 MNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 672
            +G  E   + ++ +++  V  +  +W + L      Y  + ++S G +P+  +YG    
Sbjct: 723 TDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACR 782

Query: 673 LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 732
            PL         + E +L          +++  ++ K  +A  R +SY        +K+ 
Sbjct: 783 TPL-----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRR 830

Query: 733 HPREFKVGELVLKRRVSQQP----DPRGKWTPNYEGPYVV 768
              EF+VG+LV  + ++ +       R K +P Y GPY V
Sbjct: 831 KELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKV 870



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 33/101 (32%), Positives = 48/101 (46%), Gaps = 6/101 (5%)

Query: 21  KNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDETGK 80
           K+    W+DEC+++F  +K  L+  P+LV P EG P  +Y       +GCVL Q      
Sbjct: 414 KDTAFNWSDECEKSFLELKAMLINAPVLVLPEEGEPYTVYTDASIVGLGCVLMQ------ 467

Query: 81  KEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLV 121
           K   I Y S++    E  Y        A+ +A K  R YL+
Sbjct: 468 KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLI 508


>At2g11680 putative retroelement pol polyprotein
          Length = 301

 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 56/182 (30%), Positives = 94/182 (50%), Gaps = 3/182 (1%)

Query: 19  LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
           L K    ++ +EC  AF S K  L+  PI+  P    P  +     D +VG VLGQ+ + 
Sbjct: 67  LCKEAEFIFEEECLTAFKSTKEALVSAPIVQAPNRDYPFEIMCDDSDYAVGAVLGQKID- 125

Query: 79  GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
            +K H IYY S    D + RY    K   A+ +A ++ R YLV     + +    +++I+
Sbjct: 126 -RKLHVIYYASGTMDDTQVRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHIY 184

Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
            K     ++ RW +LL E+D+    +K I+  + ADHL+   ++D  PI+   P+E++M 
Sbjct: 185 AKKDTKPRLLRWILLLQEFDMEIVDKKGIENGV-ADHLSRMRIEDEVPIDDSMPEEQLMA 243

Query: 199 LK 200
           ++
Sbjct: 244 IQ 245


>At4g07610
          Length = 276

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 55/168 (32%), Positives = 85/168 (49%), Gaps = 2/168 (1%)

Query: 437 RCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIY 496
           R V E E E ++   H  T+G + T      K+L+AG++W  M  +  +   KC  C   
Sbjct: 74  RYVSEDEVEGILLHCHCSTYGGNFTTFKTVSKILQAGFWWPTMFKEAQEFVLKCDSCHRK 133

Query: 497 ADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 556
            +         N I     F +WGID IG     +S G+++ILVA+DY +KW+EA +   
Sbjct: 134 GNISKRNEMPQNPILEVELFDVWGIDFIGPFP--SSYGNKYILVAVDYVSKWIEATASPT 191

Query: 557 VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEH 604
              +VV K  K  I  R+GVP  +I+D G +  N V + L ++  ++H
Sbjct: 192 NDAKVVLKLFKTIIFSRFGVPRVVISDGGKHFINKVFENLLKKHGVKH 239


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.137    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,761,094
Number of Sequences: 26719
Number of extensions: 824817
Number of successful extensions: 2078
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1790
Number of HSP's gapped (non-prelim): 201
length of query: 801
length of database: 11,318,596
effective HSP length: 107
effective length of query: 694
effective length of database: 8,459,663
effective search space: 5871006122
effective search space used: 5871006122
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)