BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140022.13 + phase: 0
(213 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17860 Unknown protein (F2H15.9) 163 7e-41
At1g73260 putative trypsin inhibitor (At1g73260) 97 8e-21
At1g73330 unknown protein 47 6e-06
At1g72290 drought induced protein, putative 40 7e-04
At3g04320 putative trypsin inhibitor 39 0.002
At3g04330 putative trypsin inhibitor 35 0.029
At3g29080 hypothetical protein 31 0.55
At5g17640 putative protein 29 2.1
At4g29060 unknown protein 29 2.1
At4g11580 putative protein 27 6.1
At1g47620 hypothetical protein 27 6.1
At1g47630 hypothetical protein 27 8.0
>At1g17860 Unknown protein (F2H15.9)
Length = 196
Score = 163 bits (412), Expect = 7e-41
Identities = 92/189 (48%), Positives = 122/189 (63%), Gaps = 20/189 (10%)
Query: 24 DASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLIARSPNETCPLNVVV 83
+A+ E V D GK + GV+YYI PV GRG G + ++ ETCP +V+
Sbjct: 23 EAAVEPVKDINGKSLLTGVNYYILPV----IRGRG------GGLTMSNLKTETCPTSVIQ 72
Query: 84 --VEGFRGQGVTFTPVNPKKGVIRVSTDLNIKTSLNTSCEESTIWTLDDFDSSTGQWFVT 141
E +G V F+P + K I VSTD+NIK S ++IW L +FD +T QWF++
Sbjct: 73 DQFEVSQGLPVKFSPYD-KSRTIPVSTDVNIKFS------PTSIWELANFDETTKQWFIS 125
Query: 142 TGGVLGNPGKDTVDNWFKIEKYEDDYKFVFCPTVCNFCKVMCRNVGIFRDSNGNQRVALT 201
T GV GNPG+ TVDNWFKI+K+E DYK FCPTVCNFCKV+CR+VG+F +G +R+AL+
Sbjct: 126 TCGVEGNPGQKTVDNWFKIDKFEKDYKIRFCPTVCNFCKVICRDVGVF-VQDGKRRLALS 184
Query: 202 DVPYKVRFQ 210
DVP KV F+
Sbjct: 185 DVPLKVMFK 193
>At1g73260 putative trypsin inhibitor (At1g73260)
Length = 215
Score = 96.7 bits (239), Expect = 8e-21
Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 30 VVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLIARSPNETCPLNVVVVEGFRG 89
VVD +G + YY+ PV GRG G + +A + CP ++V
Sbjct: 30 VVDIDGNAM-FHESYYVLPV----IRGRG------GGLTLAGRGGQPCPYDIVQESSEVD 78
Query: 90 QG--VTFTPVNPKKGVIRVSTDLNIKTSLN-TSCEESTIWTLDDFDSSTGQWFVTTGGVL 146
+G V F+ K + S +LNI+T + T C +ST W + +FD Q+FV G
Sbjct: 79 EGIPVKFSNWRLKVAFVPESQNLNIETDVGATICIQSTYWRVGEFDHERKQYFVVAGPKP 138
Query: 147 GNPGKDTVDNWFKIEKY-EDDYKFVFCPTVCNFCKVMCRNVGIFRDSNGNQRVALTDVPY 205
G+D++ ++FKIEK ED YKFVFCP C+ C +VGIF D G +R+AL+D P+
Sbjct: 139 EGFGQDSLKSFFKIEKSGEDAYKFVFCPRTCDSGNPKCSDVGIFIDELGVRRLALSDKPF 198
Query: 206 KVRFQ 210
V F+
Sbjct: 199 LVMFK 203
>At1g73330 unknown protein
Length = 209
Score = 47.4 bits (111), Expect = 6e-06
Identities = 60/218 (27%), Positives = 86/218 (38%), Gaps = 35/218 (16%)
Query: 3 SICILLAVLFALSTQPLLGEADASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVV 62
+I I L P L D V D+ G+ +R G Y+I VP P G G
Sbjct: 4 TISITTIFLVVALAAPSLARPD---NHVEDSVGRLLRPGQTYHI--VPANPETGGG---- 54
Query: 63 GSGFVLIARSPNETCPLNVVVVEGFRGQGVTFTPVNPKKGVIRVSTDLNIKTSLNTS--- 119
I + E CPL++ G+ P+ K + V +I
Sbjct: 55 ------IFSNSEEICPLDIFQSNNPLDLGL---PIKFKSELWFVKEMNSITIEFEAPNWF 105
Query: 120 -C-EESTIWTLDDFDSSTGQWFVTTGGVLGNPGKDTVDNWFKIEKYEDD-YKFVFCPTVC 176
C +ES W + + ++TGG G F+I + + YK V+C
Sbjct: 106 LCPKESKGWRVVYSEEFKKSLIISTGGSSNPSG-------FQIHRVDGGAYKIVYCT--- 155
Query: 177 NFCKVMCRNVGIFRDSNGNQRVALT-DVPYKVRFQPSA 213
N C NVGIF D +G +R+ALT D V+FQ +A
Sbjct: 156 NISTTTCMNVGIFTDISGARRLALTSDEALLVKFQKAA 193
>At1g72290 drought induced protein, putative
Length = 215
Score = 40.4 bits (93), Expect = 7e-04
Identities = 39/140 (27%), Positives = 61/140 (42%), Gaps = 17/140 (12%)
Query: 28 EQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLIARSPNETCPLNV--VVVE 85
E V DT G + Y+I+PV T + G G V A + CPL + ++
Sbjct: 25 EPVKDTAGNPLNTREQYFIQPVKTESKN-------GGGLVPAAITVLPFCPLGITQTLLP 77
Query: 86 GFRGQGVTFTPVNPKKGVIRVSTDLNI--KTSLNTSCEE-STIWTLDDFDSSTGQWFVTT 142
G V+F + S+ +NI K+++ C+E S W +DD S+ + +
Sbjct: 78 YQPGLPVSFVLALGVGSTVMTSSAVNIEFKSNIWPFCKEFSKFWEVDDSSSAPKEPSILI 137
Query: 143 GGVLGNPGKDTVDNWFKIEK 162
GG +G+ FKIEK
Sbjct: 138 GGKMGDRNSS-----FKIEK 152
>At3g04320 putative trypsin inhibitor
Length = 244
Score = 39.3 bits (90), Expect = 0.002
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 1 MKSICILLAVLFALSTQPLLGEADASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPC 60
MK+ +++ ++ G + V D EG V+ V YYI + T C
Sbjct: 42 MKTFQLMMISFLFVAITTTSGVVSEGNDVVYDGEGDPVKPNVPYYISFM--TSDYNMWIC 99
Query: 61 VVGSGFVLIARSPNETCPLNVVVVEG---FRGQGVTFTPVNPKKGVIRVSTDLNIKTSLN 117
+ G + PN +CP ++V V F N K V+R S L IK
Sbjct: 100 RMQYG----STDPN-SCPQQPLMVTHPNLAAPTPVMFVLAN-KSDVVRESAKLKIKFVGP 153
Query: 118 TSCEESTIWTLDDFDSSTGQWFVTTGGVLGNPGKDTVDNWFKIEKYEDDYKFVF 171
C +S W + +SS G+ F+ G+ D+ F I K + YKF F
Sbjct: 154 RQCGKSGFWKVVQRNSSEGEVFLN-----GSKSMSHNDSTFAIHKTNEYYKFTF 202
>At3g04330 putative trypsin inhibitor
Length = 202
Score = 35.0 bits (79), Expect = 0.029
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 92 VTFTPVNPKKGVIRVSTDLNIKTSLNTSCEESTIWTLDDFDSSTGQWFVTTGGVLGNPGK 151
V F N + V+R S L IK C ES W + SS G+ V+ N +
Sbjct: 87 VMFVLSNKSETVVRESAKLKIKFVDPRPCGESGFWRVVQRTSSEGE-------VVLNGSE 139
Query: 152 DTVDN--WFKIEKYEDDYKFVF 171
T DN F IE+ + YKF F
Sbjct: 140 STSDNASTFAIEQTNEYYKFTF 161
>At3g29080 hypothetical protein
Length = 445
Score = 30.8 bits (68), Expect = 0.55
Identities = 25/84 (29%), Positives = 37/84 (43%), Gaps = 12/84 (14%)
Query: 57 RGPCVVGSGFVLIARSPNETCPLNVVVVEGFRGQGVTFTPVNPKKGVIRVSTDLN---IK 113
RG C G A S +E P V+ EG G G +G I + D +K
Sbjct: 251 RGDCPA-EGAAAAAASVDEVGPPGVIGGEGLEGIGA--------EGNIGLEVDFGLSIVK 301
Query: 114 TSLNTSCEESTIWTLDDFDSSTGQ 137
S SC + I L++F++++GQ
Sbjct: 302 VSATLSCIVAVIPDLEEFETASGQ 325
>At5g17640 putative protein
Length = 432
Score = 28.9 bits (63), Expect = 2.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 19 LLGEADASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLIARSPNE 75
+L A+ E ++DT+ + + P + G G CV G GFV+ +R E
Sbjct: 322 ILISAEKGGEFLIDTDKQMLTVAATPIPSPQSSGDFSGLGQCVSGGGFVMSSRVQGE 378
>At4g29060 unknown protein
Length = 953
Score = 28.9 bits (63), Expect = 2.1
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 24 DASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLIARSPNETCPLNVVV 83
D SPE+ TE A + + P+P T + +V + + + + P +
Sbjct: 419 DDSPEKEEQTETLAAAAEAEEVVPPIPETKSEEE---IVENSIPPNSATDEVSSPEALAS 475
Query: 84 VEGFRGQGVTFTPVNPKKGVIRVSTDLNIKTSLNTSCEES 123
E + Q V TPV+ K V T+ + + S NT+ ES
Sbjct: 476 EEVEKEQVVAETPVDEVKTPAPVVTEASSEESGNTATAES 515
>At4g11580 putative protein
Length = 333
Score = 27.3 bits (59), Expect = 6.1
Identities = 12/36 (33%), Positives = 17/36 (46%)
Query: 149 PGKDTVDNWFKIEKYEDDYKFVFCPTVCNFCKVMCR 184
P ++DN+ + KF+ CP C CK CR
Sbjct: 278 PIAKSIDNYVITAATQKLEKFITCPHDCMICKDRCR 313
>At1g47620 hypothetical protein
Length = 520
Score = 27.3 bits (59), Expect = 6.1
Identities = 13/45 (28%), Positives = 20/45 (43%)
Query: 105 RVSTDLNIKTSLNTSCEESTIWTLDDFDSSTGQWFVTTGGVLGNP 149
+V +++NI + TIW D + +W TGGV P
Sbjct: 405 KVKSNINIMIFIYAMGRMKTIWGEDAMEFKPERWISETGGVRHEP 449
>At1g47630 hypothetical protein
Length = 552
Score = 26.9 bits (58), Expect = 8.0
Identities = 13/45 (28%), Positives = 20/45 (43%)
Query: 105 RVSTDLNIKTSLNTSCEESTIWTLDDFDSSTGQWFVTTGGVLGNP 149
+V ++LNI + TIW D + +W TGG+ P
Sbjct: 236 KVKSNLNIMIFIYAMGRMKTIWGEDAMEFKPERWISETGGLRHEP 280
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,252,709
Number of Sequences: 26719
Number of extensions: 238600
Number of successful extensions: 452
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 439
Number of HSP's gapped (non-prelim): 12
length of query: 213
length of database: 11,318,596
effective HSP length: 95
effective length of query: 118
effective length of database: 8,780,291
effective search space: 1036074338
effective search space used: 1036074338
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC140022.13