BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139747.5 + phase: 0 /pseudo
(1608 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 781 0.0
At1g48710 hypothetical protein 781 0.0
At1g58140 hypothetical protein 777 0.0
At3g60170 putative protein 728 0.0
At2g15650 putative retroelement pol polyprotein 703 0.0
At1g32590 hypothetical protein, 5' partial 688 0.0
At3g59720 copia-type reverse transcriptase-like protein 682 0.0
At3g25450 hypothetical protein 667 0.0
At2g05390 putative retroelement pol polyprotein 624 e-178
At1g31210 putative reverse transcriptase 599 e-171
At1g37110 590 e-168
At2g16000 putative retroelement pol polyprotein 573 e-163
At2g20460 putative retroelement pol polyprotein 571 e-162
At2g21460 putative retroelement pol polyprotein 566 e-161
At3g45520 copia-like polyprotein 566 e-161
At1g70010 hypothetical protein 565 e-160
At2g13930 putative retroelement pol polyprotein 559 e-159
At4g03810 putative retrotransposon protein 528 e-149
At5g35820 copia-like retrotransposable element 517 e-146
At2g19840 copia-like retroelement pol polyprotein 472 e-133
>At3g61330 copia-type polyprotein
Length = 1352
Score = 781 bits (2016), Expect = 0.0
Identities = 428/1118 (38%), Positives = 619/1118 (55%), Gaps = 81/1118 (7%)
Query: 503 KIRVKCCFCDKYGHNESICHV--KKKFIKQNNLYLSSERSHLNRSESSQKAEKAKKTCFY 560
K VKC C K+GH S C KKF E++H +K ++
Sbjct: 276 KSSVKCYNCGKFGHYASECKAPSNKKF---------EEKAHY----VEEKIQEEDMLLMA 322
Query: 561 CNKSDHKRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*VLPQGARTKPWYLDSGCSRH 620
K D +++N WYLDSG S H
Sbjct: 323 SYKKDEQKEN--------------------------------------HKWYLDSGASNH 344
Query: 621 MTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTI----GNLNSAKIENVQYVEGLKHNL 676
M G ++ F ++ G V G+ K +++GKG I N + I NV Y+ +K N+
Sbjct: 345 MCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNI 404
Query: 677 LSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKD 736
LS+ QL + G+++ K N +R SN + + ++VL + + A+ M +++
Sbjct: 405 LSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEE 464
Query: 737 KWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSSFKTIEFIST 796
W+WH R GH++ + LS+ ++VRGLP I+ +++CE C+ GKQ K SF
Sbjct: 465 SWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRA 523
Query: 797 QKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQ 856
QKPLEL+H D+ P++ SL Y + +DDFSR TWV FLK K E FE F+ F V+
Sbjct: 524 QKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVE 583
Query: 857 NEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVERKNRTLQEMAR 916
E G I T+RSD GGEF + F + ++NGI+ + R+PQQNGVVERKNRT+ EMAR
Sbjct: 584 KESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMAR 643
Query: 917 TMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYI 976
+ML + WAEA+ + Y+LNR + V KTP E W KP +S+ +FG +
Sbjct: 644 SMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHA 703
Query: 977 LNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE---YDEHSK-- 1031
EK K D KS+K IF+GY SKGY++YN T+ IS +I+FDE +D +S
Sbjct: 704 HVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEE 763
Query: 1032 -----PKENEDTEAPTLQNVPVQNTENTVEKEDDQNVQDQSLQSPPRSWRMVGDHPTDQI 1086
P ED PT + P + +++ S + PR +R + Q
Sbjct: 764 DYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPR-FRSI------QE 816
Query: 1087 IGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVP 1146
+ T+ F + ++ EP +AI +W M EE+ ++N W L
Sbjct: 817 LYEVTENQENLTLF-----CLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 1147 NNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRIL 1206
IG +WV++ K + +G+V R KARLVA+GY+Q+ GIDYDE FAPVARLE +R++
Sbjct: 872 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLI 931
Query: 1207 LAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAP 1266
++ AA K+ QMDVKSAFLNG L EEVY+ QP G+I K + + V +L K LYGLKQAP
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991
Query: 1267 RAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNL 1326
RAW R+ + E F + + L+ K D+LI +YVDD+IF + EEF
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKE 1051
Query: 1327 MQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSS 1386
M EFEM+ +G + ++LG+++KQ NGIFI+QE Y K++LKK+K++++ + TPM
Sbjct: 1052 MTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIK 1111
Query: 1387 LDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRY 1446
L K E G+ + ++ ++GSL YLT +RPDI++AVG+ +R+ +H A KRI RY
Sbjct: 1112 LSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRY 1171
Query: 1447 LVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIE 1506
+ GT + GL Y S + LV Y D+D+ GD +RKSTSG ++G W +KQ +
Sbjct: 1172 IKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVT 1231
Query: 1507 LSTTEAEYVSAASCCSQILWVRNQLEDYSL-RYTSVPIYCDNTSAINLSKNPIQHSRSKH 1565
LST EAEYV+A SC +W+RN L++ SL + I+ DN SAI L+KNP+ H RSKH
Sbjct: 1232 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1291
Query: 1566 IEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVR 1603
I+ ++H+IR+ V KK++ L +V T +Q+AD FTKPL R
Sbjct: 1292 IDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKR 1329
Score = 110 bits (274), Expect = 9e-24
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 23/332 (6%)
Query: 7 SSNRP---PLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWST 63
S+N P P+ SNY W +M+ L + +D+W ++ G P + + +
Sbjct: 3 SNNVPFQVPVLTKSNYDNWSLRMKAILGA--HDVWEIVEKGFIEPENEGSLSQTQKDGLR 60
Query: 64 DEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGV 123
D + + + KA + L + E+V E T+AKE W+ L+ ++G VK+ R+
Sbjct: 61 DSRKR---DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLR 117
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+FE +M E E + + ++R T+ N ++ G+ + K+LR L + +VT I
Sbjct: 118 GEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
+ KDL++M +E L+GSL+A+E KK K + + E+ + +
Sbjct: 178 ETKDLEAMTIEQLLGSLQAYE--------EKKKKKEDIAEQVLNMQITKEENGQSYQRRG 229
Query: 244 VHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNIS---IKTEADKSQVTCYGCNKTGH 300
+ + R R R + K+ DKS V CY C K GH
Sbjct: 230 GGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGH 289
Query: 301 FKNECPDIKKVQRKPPFKKKAMITWDDMEESD 332
+ +EC K F++KA + ++E D
Sbjct: 290 YASEC----KAPSNKKFEEKAHYVEEKIQEED 317
>At1g48710 hypothetical protein
Length = 1352
Score = 781 bits (2016), Expect = 0.0
Identities = 428/1097 (39%), Positives = 616/1097 (56%), Gaps = 33/1097 (3%)
Query: 530 QNNLYLSSERSHLNRSESSQKA--EKAKKTCFYCNKSDHKRQN--VTFRKDLLEELTLKD 585
++N E S R + K+ +K+ C+ C K H K E+ +
Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVE 310
Query: 586 PTLHGYLKFLSCQM*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNND 645
+ L Q K WYLDSG S HM G ++ F ++ G V G+
Sbjct: 311 EKIQEEDMLLMASYKKDEQEENHK-WYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 646 KGKIRGKGTI----GNLNSAKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQA 701
K +++GKG I N + I NV Y+ +K N+LS+ QL + G+++ K N +R
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 702 SSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLV 761
SN + + ++VL + + A+ M +++ W+WH R GH++ + LS+ ++V
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489
Query: 762 RGLPKISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRY 821
RGLP I+ +++CE C+ GKQ K SF QK LEL+H D+ P++ SL Y
Sbjct: 490 RGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNY 548
Query: 822 GFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKT 881
+ +DDFSR TWV FLK K E FE F+ F V+ E G I T+RSD GGEF + F
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608
Query: 882 FFDENGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILN 941
+ ++NGI+ + R+PQQNGV ERKNRT+ EMAR+ML + WAEA+ + Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668
Query: 942 RVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTT 1001
R + V KTP E W K +S+ +FG + EK K D KS+K IF+GY
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNN 728
Query: 1002 SKGYRVYNLKTQTVEISMHIIFDE---YDEHSK-------PKENEDTEAPTLQNVPVQNT 1051
SKGY++YN T+ IS +I+FDE +D +S P ED PT + P +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEP 788
Query: 1052 ENTVEKEDDQNVQDQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQM 1111
+++ S + PR +R + Q + T+ F + ++
Sbjct: 789 TTPPTSPTSSQIEESSSERTPR-FRSI------QELYEVTENQENLTLF-----CLFAEC 836
Query: 1112 EPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVV 1171
EP EAI +W M EE+ ++N W L IG +WV++ K + +G+V
Sbjct: 837 EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVE 896
Query: 1172 RNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFL 1231
R KARLVA+GY Q+ GIDYDE FAPVARLE +R++++ AA K+ QMDVKSAFLNG L
Sbjct: 897 RYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956
Query: 1232 NEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTL 1291
EEVY+ QP G+I K + + V +L KALYGLKQAPRAW R+ + E F + + L
Sbjct: 957 EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 1016
Query: 1292 FRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHS 1351
+ K D+LI +YVDD+IF M EEF M EFEM+ +G + ++LG+++KQ
Sbjct: 1017 YIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1352 NGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYL 1411
NGIFI+QE Y K++LKK+KM+++ + TPM L K E G+ + ++ ++GSL YL
Sbjct: 1077 NGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYL 1136
Query: 1412 TASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDA 1471
T +RPDI++AVG+ +R+ +H A KRI RY+ GT + GL Y S + LV Y D+
Sbjct: 1137 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDS 1196
Query: 1472 DYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQL 1531
D+ GD +RKSTSG ++G W +KQ + LST EAEYV+A SC +W+RN L
Sbjct: 1197 DWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLL 1256
Query: 1532 EDYSL-RYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTE 1590
++ SL + I+ DN SAI L+KNP+ H RSKHI+ ++H+IR+ V KK++ L +V T
Sbjct: 1257 KELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTH 1316
Query: 1591 NQLADIFTKPLVRIDSI 1607
+Q+ADIFTKPL R D I
Sbjct: 1317 DQVADIFTKPLKREDFI 1333
Score = 112 bits (279), Expect = 2e-24
Identities = 90/351 (25%), Positives = 156/351 (43%), Gaps = 27/351 (7%)
Query: 7 SSNRP---PLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWST 63
S+N P P+ SNY W +M+ L + +D+W ++ G P + + +
Sbjct: 3 SNNVPFQVPVLTKSNYDNWSLRMKAILGA--HDVWEIVEKGFIEPENEGSLSQTQKDGLR 60
Query: 64 DEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGV 123
D + + + KA + L + E+V E T+AKE W+ L+ ++G VK+ R+
Sbjct: 61 DSRKR---DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLR 117
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+FE +M E E + + ++R T+ N ++ G+ + K+LR L + +VT I
Sbjct: 118 GEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
+ KDL++M +E L+GSL+A+E +K KK + + Q + + + +
Sbjct: 178 ETKDLEAMTIEQLLGSLQAYE-----EKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQ 232
Query: 244 VHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKN 303
V R + + K+ DKS V CY C K GH+ +
Sbjct: 233 VRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYAS 292
Query: 304 ECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMA--QSDDEEE 352
EC K F++KA + ++E DM LMA + D++EE
Sbjct: 293 EC----KAPSNKKFEEKANYVEEKIQEE--------DMLLMASYKKDEQEE 331
>At1g58140 hypothetical protein
Length = 1320
Score = 777 bits (2006), Expect = 0.0
Identities = 425/1087 (39%), Positives = 609/1087 (55%), Gaps = 45/1087 (4%)
Query: 530 QNNLYLSSERSHLNRSESSQKA--EKAKKTCFYCNKSDHKRQN--VTFRKDLLEELTLKD 585
++N E S R + K+ +K+ C+ C K H K E+ +
Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVE 310
Query: 586 PTLHGYLKFLSCQM*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNND 645
+ L Q K WYLDSG S HM G ++ F ++ G V G+
Sbjct: 311 EKIQEEDMLLMASYKKDEQEENHK-WYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 646 KGKIRGKGTI----GNLNSAKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQA 701
K +++GKG I N + I NV Y+ +K N+LS+ QL + G+++ K N +R
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQ 429
Query: 702 SSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLV 761
SN + + ++VL + + A+ M +++ W+WH R GH++ + LS+ ++V
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489
Query: 762 RGLPKISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRY 821
RGLP I+ +++CE C+ GKQ K SF QKPLEL+H D+ P++ SL Y
Sbjct: 490 RGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNY 548
Query: 822 GFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKT 881
+ +DDFSR TWV FLK K E FE F+ F V+ E G I T+RSD GGEF + F
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLK 608
Query: 882 FFDENGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILN 941
+ ++NGI+ + R+PQQNGV ERKNRT+ EMAR+ML + WAEA+ + Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668
Query: 942 RVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTT 1001
R + V KTP E W KP +S+ +FG + EK K D KS+K IF+GY
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNN 728
Query: 1002 SKGYRVYNLKTQTVEISMHIIFDEYDEHSKPKENEDTEAPTLQNVPVQNTENTVEKEDDQ 1061
SKGY++YN T+ IS +I+FDE E ED N E++ +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEED-----------YNFFPHFEEDKPE 777
Query: 1062 NVQDQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAII 1121
+++ PP + PT T+ + + EP EAI
Sbjct: 778 PTREE----PP------SEEPTTPPTSPTSSQIE-------------EKCEPMDFQEAIE 814
Query: 1122 DDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQG 1181
+W M EE+ ++N W L IG +WV++ K + +G+V R KARLVA+G
Sbjct: 815 KKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKG 874
Query: 1182 YNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPP 1241
Y+Q+ GIDYDE FAPVARLE +R++++ AA K+ QMDVKSAFLNG L EEVY+ QP
Sbjct: 875 YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 934
Query: 1242 GFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLL 1301
G+I K + + V +L KALYGLKQAPRAW R+ + E F + + L+ K D+L
Sbjct: 935 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDIL 994
Query: 1302 IVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKY 1361
I +YVDD+IF M EEF M EFEM+ +G + ++LG+++KQ NGIFI+QE Y
Sbjct: 995 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1054
Query: 1362 IKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFA 1421
K++LKK+KM+++ + TPM L K E G+ + ++ ++GSL YLT +RPDI++A
Sbjct: 1055 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1114
Query: 1422 VGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERK 1481
VG+ +R+ +H A KRI RY+ GT + GL Y S + LV Y D+D+ GD +RK
Sbjct: 1115 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1174
Query: 1482 STSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSL-RYTS 1540
STSG ++G W +KQ + LST EAEYV+A SC +W+RN L++ SL +
Sbjct: 1175 STSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEP 1234
Query: 1541 VPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKP 1600
I+ DN SAI L+KNP+ H RSKHI+ ++H+IR+ V KK++ L +V T +Q+ADIFTKP
Sbjct: 1235 TKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKP 1294
Query: 1601 LVRIDSI 1607
L R D I
Sbjct: 1295 LKREDFI 1301
Score = 111 bits (278), Expect = 3e-24
Identities = 90/351 (25%), Positives = 156/351 (43%), Gaps = 27/351 (7%)
Query: 7 SSNRP---PLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWST 63
S+N P P+ SNY W +M+ L + +D+W ++ G P + + +
Sbjct: 3 SNNVPFQVPVLTKSNYDNWSLRMKAILGA--HDVWEIVEKGFIEPENEGSLSQTQKDGLR 60
Query: 64 DEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGV 123
D + + + KA + L + E+V E T+AKE W+ L+ ++G VK+ R+
Sbjct: 61 DSRKR---DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLR 117
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+FE +M E E + + ++R T+ N ++ G+ + K+LR L + +VT I
Sbjct: 118 GEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
+ KDL++M +E L+GSL+A+E +K KK + + Q + + + +
Sbjct: 178 ETKDLEAMTIEQLLGSLQAYE-----EKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQ 232
Query: 244 VHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKN 303
V R + + K+ DKS V CY C K GH+ +
Sbjct: 233 VRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYAS 292
Query: 304 ECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMA--QSDDEEE 352
EC K F++KA + ++E DM LMA + D++EE
Sbjct: 293 EC----KAPSNKKFEEKANYVEEKIQEE--------DMLLMASYKKDEQEE 331
>At3g60170 putative protein
Length = 1339
Score = 728 bits (1878), Expect = 0.0
Identities = 396/1027 (38%), Positives = 588/1027 (56%), Gaps = 30/1027 (2%)
Query: 604 QGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIG---NLNS 660
Q R + W+LDSGCS HMTG + F E+ V GN+ + + GKG++ N +
Sbjct: 293 QANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVT 352
Query: 661 AKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSG-SRRKNLYVL 719
I V YV L++NLLS+ QL + G ++ + C+V S + + S + ++L
Sbjct: 353 QVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLL 412
Query: 720 ELNDMPAEFCFMS---LEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICE 776
C + ++K+ +WH R GH++ + + L+ +V GLP + K+ IC
Sbjct: 413 ASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKE-ICA 471
Query: 777 ACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVL 836
C+ GKQ + S + L+L+H D+ P+ S +GKRY +DDF+R TWV
Sbjct: 472 ICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVY 531
Query: 837 FLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCAR 896
FL K E+F F+ F V+ E G + +R+D GGEF + F F +GI + A
Sbjct: 532 FLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAF 591
Query: 897 TPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYEL 956
TPQQNGV ERKNRT+ R+ML+E V FW+EA S +I NR V TP E
Sbjct: 592 TPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEA 651
Query: 957 WKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVE 1016
W KP + YF +FGC Y+ +K K D KS K +FLG S SK +R+Y+ + +
Sbjct: 652 WSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIV 711
Query: 1017 ISMHIIFDEYDEHSKPKENEDTEAPTLQNVPVQNTENTVEKE-----------DDQNVQD 1065
IS ++FDE + + + + TL+ + +N+ E D NV
Sbjct: 712 ISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSS 771
Query: 1066 QSLQSP------PRSWRMVGDH--PTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSIN 1117
+ +P P + ++ + P T +G + + M+++ +P +
Sbjct: 772 SPILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFD 831
Query: 1118 EAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARL 1177
+A+ D W E M+ E+ +N W L + T IG +WV++ KL+E+G+V + KARL
Sbjct: 832 DAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARL 891
Query: 1178 VAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYV 1237
VA+GY Q GIDY E FAPVARL+ +R +LA ++ + ++FQ+DVKSAFL+G L EEVYV
Sbjct: 892 VAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYV 951
Query: 1238 SQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHN 1297
QP GFI + + V+KL KALYGLKQAPRAWY R+ + ++ F R + TLF KT
Sbjct: 952 RQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRV 1011
Query: 1298 TDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFIS 1357
++LIV +YVDD+IF + MC+EF M EFEMS +G++ FLG+++KQ GIFI
Sbjct: 1012 GNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFIC 1071
Query: 1358 QEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPD 1417
Q +Y +++L ++ M+E+ + P+ P + L KDE+G+ + E ++ ++GSL+YLT +RPD
Sbjct: 1072 QRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPD 1131
Query: 1418 IVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWY--RKGSSFDLVAYCDADYAG 1475
+++ V L +RF + + SH A KRI RYL GT +LG++Y RK S L+A+ D+DYAG
Sbjct: 1132 LMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAG 1191
Query: 1476 DKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYS 1535
D +R+STSG + I W+ +KQ + LSTTEAEY++AA C Q +W+R LE
Sbjct: 1192 DLNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLG 1251
Query: 1536 LRYTSVP-IYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLA 1594
S I CDN+S I LSK+P+ H +SKHIE++ H++RD V + L + TE+Q+A
Sbjct: 1252 AEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVA 1311
Query: 1595 DIFTKPL 1601
DIFTKPL
Sbjct: 1312 DIFTKPL 1318
Score = 118 bits (295), Expect = 3e-26
Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 12 PLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWSTDEKAQVLL 71
P FDG Y FW ME FLRS++ +W ++ +G +P G A + + L
Sbjct: 13 PRFDGY-YDFWSMTMENFLRSRE--LWRLVEEG--IPAIVVGTTPVSEAQRSAVEEAKLK 67
Query: 72 NSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGVRKFEVFEM 131
+ K + FL A+ E E + + + +K +W+++K ++G++ VK ++ ++FE+ M
Sbjct: 68 DLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAM 127
Query: 132 SENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAITQAKDLKSM 191
E E ID R T+VN+M++ G+ + KILR L + +V +I ++ DL ++
Sbjct: 128 KEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTL 187
Query: 192 NLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEEVHEEEAED 251
++++L GSL HE L G VQE Q L+ HEE
Sbjct: 188 SIDELHGSLLVHEQRLNG------------------------HVQEEQALKVTHEERP-- 221
Query: 252 ELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKNECPDIKK 310
S+ R + R ++ R + ++ +++ V CY C+ GHF+ ECP+ +K
Sbjct: 222 -----SQGRGRGVFRGSRGRGRGRG-----RSGTNRAIVECYKCHNLGHFQYECPEWEK 270
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 703 bits (1815), Expect = 0.0
Identities = 425/1254 (33%), Positives = 664/1254 (52%), Gaps = 80/1254 (6%)
Query: 389 ELSEIKEEKEILQNKYDESRKTIK----ILQDSHFDMSEKQREINRKQKGIMSVPSEVQK 444
+L ++ E E L+ +++ KT +L+ EK+ QK ++S+P++
Sbjct: 114 KLQSLRREYENLKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDS 173
Query: 445 ENILLKK----EVETLKKVLTGFIKSTETFQNIVGSQNESTKKSGLGFKDPSKIIGSFVP 500
+L++ + T+ ++L G +K+ E V ++ ESTK+ + + G
Sbjct: 174 IVSVLEQTRDLDALTMSELL-GILKAQEAR---VTAREESTKEGAFYVRSKGRESGFKQD 229
Query: 501 KAKIRVK-----CCFCDKYGHNESICHVKKKFIKQNNLYLSSERSHLNRSESSQKAEKAK 555
RV C F H E C K K H S+ K K
Sbjct: 230 NTNNRVNQDKKWCGFHKSSKHTEEECREKPK-----------NDDHGKNKRSNIKCYKCG 278
Query: 556 KTCFY---CNKSDHKRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*VLPQGARTKPWY 612
K Y C + +R +VT ++ + E D L + S + R W
Sbjct: 279 KIGHYANECRSKNKERAHVTLEEEDVNE----DHMLFSASEEESTTL-------REDVWL 327
Query: 613 LDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLN---SAKIENVQYV 669
+DSGC+ HMT + F K + N D GKG I + I+NV V
Sbjct: 328 VDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRIIKNVFLV 387
Query: 670 EGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAEFC 729
GL+ NLLS+ Q+ SG+ V F+ C ++ A+ ++ K+ + ++L+ + E
Sbjct: 388 PGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMNIEMTDKS-FKIKLSSVEEEAM 446
Query: 730 FMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSSFK 789
+++ ++ WHKR GH+S K + ++ +LV GLP+ K+ C+AC GKQ + SF
Sbjct: 447 TANVQTEE-TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNLGKQSRKSFP 504
Query: 790 TIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQ 849
T++ LE++H D+ P+Q S+ G RY + +DD++ WV FLK K E+F F+
Sbjct: 505 KESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKSETFATFK 564
Query: 850 NFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVERKNR 909
F V+ + +I T+R + F ++ GI + +PQQNG ERKNR
Sbjct: 565 KFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQNGAAERKNR 614
Query: 910 TLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNK-TPYELWKNIKPSISYFH 968
+L EMAR+ML E ++ WAEA+ TS Y+ NR+ + + + TP E W KP++S+
Sbjct: 615 SLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHKPNVSHLR 674
Query: 969 IFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD- 1027
IFG CY+ +K K D K+ I +GYS +KGYRV+ L+ + VE+S ++F E
Sbjct: 675 IFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDVVFQEDKK 734
Query: 1028 -EHSKPKENEDTEAPTLQNVPVQNTENTVEKEDDQNVQDQSLQSPPRSWRMVGDHPTDQI 1086
+ K +E + T ++ ++ + D + D + + V DQ
Sbjct: 735 WDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSHVLSQVNDQE 794
Query: 1087 IGSTTDGVRTRLSFQD---------NNMA-------MISQMEPKSINEAIIDDSWIEVMK 1130
T++ + S ++ N+ A +++ EP++ +EA D W E M
Sbjct: 795 ERETSESPKKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDKEWEEAMN 854
Query: 1131 EELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDY 1190
EE+ E+N+ W LV + K +I +W+++ K D G V++KARLVA+G++Q+ GIDY
Sbjct: 855 EEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDY 914
Query: 1191 DETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPN 1250
ETFAPV+R + IR LLAYAA +L+QMDVKSAFLNG L EEVYV+QPPGF+ + K
Sbjct: 915 LETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEE 974
Query: 1251 HVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDI 1310
V +L KALYGLKQAPRAWY+R+ ++ I+NGF+R D L+ K D+LIV +YVDD+
Sbjct: 975 KVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVLIVSLYVDDL 1034
Query: 1311 IFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYIKDILKKYK 1370
I + F M+ EFEM+ +G L +FLG+++ Q +GIF+SQEKY ++ K+
Sbjct: 1035 IITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFG 1094
Query: 1371 MNEAKIMSTPMHPSSSLD--KDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARF 1428
M E+K +STP+ P + + + +YR ++G LLYL ASRPD+++A +R+
Sbjct: 1095 MKESKSVSTPLTPQGKRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPDVMYASSYLSRY 1154
Query: 1429 QTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQ 1488
+ H KR+ RY+ GT++ G+ + + LV Y D+D+ G ++KST+G
Sbjct: 1155 MSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSLEDKKSTTGYVF 1214
Query: 1489 FLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLRY-TSVPIYCDN 1547
LG A+ W KQ T+ ST EAEY++ + +Q +W++ ED+ L++ +PI CDN
Sbjct: 1215 TLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDN 1274
Query: 1548 TSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPL 1601
SAI + +NP+QH R+KHIEIK+HF+R+ K I L + E+QLAD+ TK L
Sbjct: 1275 KSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVLTKAL 1328
Score = 105 bits (263), Expect = 2e-22
Identities = 84/352 (23%), Positives = 164/352 (45%), Gaps = 33/352 (9%)
Query: 4 EGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFV-PTTKEGAVKAKSAWS 62
+G S P+FDG Y FW KM R++ +W+V+ +G V P E + A +
Sbjct: 2 QGSSHQVIPIFDGEKYDFWSIKMATIFRTRK--LWSVVEEGVPVEPVQAEETPETARAKT 59
Query: 63 TDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIG 122
E+A V ++ A L A+T + R+ +++KE WD LK ++G+ V+ ++
Sbjct: 60 LREEA-VTNDTMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSL 118
Query: 123 VRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAI 182
R++E +M +N+ I + + ++ G+ + I+KIL LP+ + +V+ +
Sbjct: 119 RREYENLKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVL 178
Query: 183 TQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELE 242
Q +DL ++ + +L+G L+A E + + K +++ + ++
Sbjct: 179 EQTRDLDALTMSELLGILKAQEARVTAREESTKEGAFYVRSKGRESGFKQDNTN-----N 233
Query: 243 EVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFK 302
V++++ SK + + R+K PK + K + +S + CY C K GH+
Sbjct: 234 RVNQDKKWCGFHKSSKHTE------EECREK-PKNDDHGKNK--RSNIKCYKCGKIGHYA 284
Query: 303 NECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMAQSDDEEEVI 354
NEC + K++A +T + +ED + D L + S++E +
Sbjct: 285 NEC--------RSKNKERAHVTLE-------EEDVNEDHMLFSASEEESTTL 321
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 688 bits (1775), Expect = 0.0
Identities = 394/1077 (36%), Positives = 590/1077 (54%), Gaps = 73/1077 (6%)
Query: 558 CFYCNKSDH-KRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*VLPQGARTKPWYLDSG 616
CF C+K H K + ++ K+ +D L +++ + + + W+LDSG
Sbjct: 212 CFKCHKMGHYKAECPSWEKEANYVEMEEDLLLMAHVEQIGDE--------EKQIWFLDSG 263
Query: 617 CSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSAKIE---NVQYVEGLK 673
CS HM G R FL + V G++ + + GKG + +I+ +V +V GLK
Sbjct: 264 CSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLK 323
Query: 674 HNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLY------VLELNDMPAE 727
+NL S+ QL G I + ++CEV + ++ + KN V + +
Sbjct: 324 NNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEET 383
Query: 728 FCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISF-EKDKICEACVKGKQVKS 786
C + K +WHKR GH++ + + L++ ++V+GLPK E++ +C+ C+KGKQ++
Sbjct: 384 RCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 443
Query: 787 SFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFE 846
S + + L+L+H D+ P+ AS +GKRY +DDFSR W L K E+F+
Sbjct: 444 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQ 503
Query: 847 AFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVER 906
F+ F V+ E G ++ +RSD GGE+ + F + E GIK + A TPQQNGV ER
Sbjct: 504 FFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAER 563
Query: 907 KNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISY 966
KNR++ M R ML E +V FW EA+ + YILNR + + + TP E W + KPS+ +
Sbjct: 564 KNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEH 623
Query: 967 FHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE- 1025
IFG Y L +K K D KS K + G S SK YR+Y+ T + IS + FDE
Sbjct: 624 LRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE 683
Query: 1026 ----YDEHSKPKE----NED-----TEAPTLQNVPVQNTENTVEKEDD-QNVQDQSLQSP 1071
+++ S +E N D E P + + Q+ E T E+E+ Q+L +
Sbjct: 684 RGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAV 743
Query: 1072 PRSWRMVGDHPT---DQIIGSTTDGVRTRLSFQDNNMAM-ISQMEPKSINEAIIDDSWIE 1127
P D ++G+ V +D +A+ I +P EA + W +
Sbjct: 744 GTGGVRQRQQPVWMKDYVVGNAR--VLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRK 801
Query: 1128 VMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEG 1187
M+ E++ E N W LV ++ +IG +W+F+ K +E+G+V + KARLVA+GY+Q+ G
Sbjct: 802 AMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYG 861
Query: 1188 IDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKE 1247
+D+ E FAPVA+ + IR++L AA K +FQ+DVKSAFL+G L E+V+V QP GF +E
Sbjct: 862 VDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEE 921
Query: 1248 KPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYV 1307
+ + V+KL KALYGLKQAPRAWY R+ F + GF + + TLF K +D L+V VYV
Sbjct: 922 ESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYV 981
Query: 1308 DDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYIKDILK 1367
DD+I+ + ++M E F N M EF M+ +G++ +FLG+++ Q GIFI+Q KY +I+K
Sbjct: 982 DDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIK 1041
Query: 1368 KYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCAR 1427
KY M + P+ P L K G +R
Sbjct: 1042 KYGMEGCNSVKNPIVPGQKLTK--------------------------------AGAVSR 1069
Query: 1428 FQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSC 1487
+ E HL AVKRI RY+ GT DLG+ Y +G + +LV + D+DYAGD +RKSTSG
Sbjct: 1070 YMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYV 1129
Query: 1488 QFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLRYT-SVPIYCD 1546
LG I W+ +KQ + LSTTEAE+VSA+ Q +W+RN LE+ R ++CD
Sbjct: 1130 FMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCD 1189
Query: 1547 NTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVR 1603
N+S I LSKNP+ H RSKHI +++HF+R+ V++ I L + T +Q+ADI TK + R
Sbjct: 1190 NSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKR 1246
Score = 73.9 bits (180), Expect = 7e-13
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 33/251 (13%)
Query: 60 AWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRI 119
A T+ + + + K + +L ++ + + + +K++W+++K ++G V+ ++
Sbjct: 13 AQRTELAEKTVKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQL 72
Query: 120 DIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMV 179
R FEV EM ETI ++R I N+MR+LG+ + KILR L + +V
Sbjct: 73 QRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVV 132
Query: 180 TAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQ 239
AI ++ ++K + ++ L SL HE +++ DV+E
Sbjct: 133 CAIEESNNIKELTVDGLQSSLMVHE-----------------------QNLSRHDVEE-- 167
Query: 240 ELEEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 299
+AE + R + R + R + + ++ V C+ C+K G
Sbjct: 168 -----RVLKAETQWRPDGGRGRGGSPSRGRGRGGYQGRG---RGYVNRDTVECFKCHKMG 219
Query: 300 HFKNECPDIKK 310
H+K ECP +K
Sbjct: 220 HYKAECPSWEK 230
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 682 bits (1760), Expect = 0.0
Identities = 399/1097 (36%), Positives = 576/1097 (52%), Gaps = 113/1097 (10%)
Query: 530 QNNLYLSSERSHLNRSESSQKA--EKAKKTCFYCNKSDHKRQN--VTFRKDLLEELTLKD 585
++N E S R + K+ +K+ C+ C K H K E+ +
Sbjct: 251 EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVE 310
Query: 586 PTLHGYLKFLSCQM*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNND 645
+ L Q K WYLDSG S HM G ++ F ++ G V G+
Sbjct: 311 EKIQEEDMLLMASYKKDEQEENHK-WYLDSGASNHMCGRKSMFAELDESVRGNVALGDES 369
Query: 646 KGKIRGKGTI----GNLNSAKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQA 701
K +++GKG I N + I NV Y+ +K N+LS+ QL + G+++ K N +R
Sbjct: 370 KMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDK 429
Query: 702 SSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLV 761
SN + + ++VL + + A+ M +++ W+WH R GH++ + LS+ ++V
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489
Query: 762 RGLPKISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRY 821
RGLP I+ +++CE C+ G Q K SF QKPLEL+H D+ P++ SL Y
Sbjct: 490 RGLPCIN-HPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNY 548
Query: 822 GFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKT 881
+ +DDFSR TWV FLK K E FE F+ F V+ E G I T+RSD GGEF + F
Sbjct: 549 FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLK 608
Query: 882 FFDENGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILN 941
+ ++NGI+ + R+PQQNGV ERKNRT+ EMAR+ML + WAEA+ + Y+LN
Sbjct: 609 YCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLN 668
Query: 942 RVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTT 1001
R + V KTP E W KP +S+ +FG + EK K D KS+K IF+GY
Sbjct: 669 RSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNN 728
Query: 1002 SKGYRVYNLKTQTVEISMHIIFDE---YDEHSK-------PKENEDTEAPTLQNVPVQNT 1051
SKGY++YN T+ IS +I+FDE +D +S P ED PT + P +
Sbjct: 729 SKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEP 788
Query: 1052 ENTVEKEDDQNVQDQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQM 1111
+++ S + PR +R + Q + T+ F + ++
Sbjct: 789 TTPPTSPTSSQIEESSSERTPR-FRSI------QELYEVTENQENLTLF-----CLFAEC 836
Query: 1112 EPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVV 1171
EP EAI +W M EE+ ++N W L IG +WV++ K + +G+V
Sbjct: 837 EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 896
Query: 1172 RNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFL 1231
R KARLVA+GY+Q+ GIDYDE FAPVARLE +R++++ AA K+ QMDVKSAFLNG L
Sbjct: 897 RYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956
Query: 1232 NEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTL 1291
EEVY+ QP G+I K + + V +L K LYGLKQAPRAW R+ + E F + + L
Sbjct: 957 EEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHAL 1016
Query: 1292 FRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHS 1351
+ K D+LI +YVDD+IF M EEF M EFEM+ +G + ++LG+++KQ
Sbjct: 1017 YIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQED 1076
Query: 1352 NGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYL 1411
NGIFI+QE Y K++LKK+KM+++ +PS ++GSL YL
Sbjct: 1077 NGIFITQEGYAKEVLKKFKMDDS-------NPS-------------------LVGSLRYL 1110
Query: 1412 TASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDA 1471
T +RPDI++AVG+ +R+ +H A KRI RY+ GT + GL Y S + LV C A
Sbjct: 1111 TCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVV-CHA 1169
Query: 1472 DYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQL 1531
+W+RN L
Sbjct: 1170 -----------------------------------------------------IWLRNLL 1176
Query: 1532 EDYSL-RYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTE 1590
++ SL + I+ DN SAI L+KNP+ H RSKHI+ ++H+IR+ V KK++ L +V T
Sbjct: 1177 KELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTH 1236
Query: 1591 NQLADIFTKPLVRIDSI 1607
+Q+ADIFTKPL R D I
Sbjct: 1237 DQVADIFTKPLKREDFI 1253
Score = 113 bits (282), Expect = 1e-24
Identities = 91/351 (25%), Positives = 156/351 (43%), Gaps = 27/351 (7%)
Query: 7 SSNRP---PLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWST 63
S+N P P+ SNY W +M+ L + +D+W ++ G P + + +
Sbjct: 3 SNNVPFQVPVLTKSNYDNWSLRMKAILGA--HDVWEIVEKGFIEPENEGSLSQTQKDGLR 60
Query: 64 DEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGV 123
D + + + KA + L + E+V E T+AKE W+ L+ ++G VK+ R+
Sbjct: 61 DSRKR---DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLR 117
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+FE +M E E + + ++R T+ N ++ G+ + K+LR L + +VT I
Sbjct: 118 GEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
+ KDL++M +E L+GSL+A+E +K KK + + Q + + + +
Sbjct: 178 ETKDLEAMTIEQLLGSLQAYE-----EKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQ 232
Query: 244 VHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKN 303
V R + + K+ DKS V CY C K GH+ +
Sbjct: 233 VRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYAS 292
Query: 304 ECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMA--QSDDEEE 352
EC K FK+KA + ++E DM LMA + D++EE
Sbjct: 293 EC----KAPSNKKFKEKANYVEEKIQEE--------DMLLMASYKKDEQEE 331
>At3g25450 hypothetical protein
Length = 1343
Score = 667 bits (1722), Expect = 0.0
Identities = 373/1030 (36%), Positives = 569/1030 (55%), Gaps = 45/1030 (4%)
Query: 611 WYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSAK----IENV 666
WYLD+G S HMTG+R F ++ G V FG++ I+GKG+I ++ + +V
Sbjct: 292 WYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDV 351
Query: 667 QYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPA 726
Y+ LK N+LS+ Q +SG ++ + + + N L + R LY + L +
Sbjct: 352 YYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKVSLEVENS 411
Query: 727 EFCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKS 786
+ ++ + IWH R GHIS +TI + + +LV G+ ++ + C +C+ GKQ +
Sbjct: 412 KCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFGKQARH 471
Query: 787 SFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFE 846
SF + LEL+H DL P+ ++ KRY FV++DD SR+ W + LK K E+F
Sbjct: 472 SFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEKSEAFG 531
Query: 847 AFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVER 906
F+ F V+ E G I T R+D GGEF + F+ F + GI + + TPQQNGVVER
Sbjct: 532 KFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVER 591
Query: 907 KNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISY 966
+NRTL M R++L N+ NY W EA+ S Y++NRV R + N+TPYE++K+ KP++ +
Sbjct: 592 RNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEH 651
Query: 967 FHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE- 1025
+FGC Y L K D +S ++LG SK YR+ + + + +S ++FDE
Sbjct: 652 LRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDEN 711
Query: 1026 ----YDEHSKPKENED---------------------TEAPTLQNVPVQNTENTVEKEDD 1060
+ E S + E TE + + + + +E +
Sbjct: 712 RSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENIIEEAE 771
Query: 1061 QNVQDQSLQSPP---RSWRMV--GDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKS 1115
DQS + P RS R V ++ D ++ + + L+ D EP
Sbjct: 772 TEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND---------EPWD 822
Query: 1116 INEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKA 1175
EA W + KEE+ E+N+ W+LV IG +WVF+ K + +G + + KA
Sbjct: 823 FKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKA 882
Query: 1176 RLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEV 1235
RLVA+GY Q+ G+D++E FAPVAR+E +R+++A AA ++ +DVK+AFL+G L E+V
Sbjct: 883 RLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDV 942
Query: 1236 YVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKT 1295
YVSQP GF NKE V+KL KALYGL+QAPRAW +L+ L E F + + +L+RK
Sbjct: 943 YVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQ 1002
Query: 1296 HNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIF 1355
++L+V VYVDD++ + + + F M +FEMS +G+L ++LG+++ Q +GI
Sbjct: 1003 EGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGIT 1062
Query: 1356 ISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASR 1415
+ QE+Y K IL++ M++ ++TPM S L K + K I E +YR IG L YL +R
Sbjct: 1063 LKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLRYLLHTR 1122
Query: 1416 PDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAG 1475
PD+ + VG+ +R+ +ESH A+K+I RYL GTT GL+++KG + L+ Y D+ +
Sbjct: 1123 PDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYSDSSHNV 1182
Query: 1476 DKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQL-EDY 1534
D + KST G +L I W +KQ + LS+ EAE+++A Q +W++ L E
Sbjct: 1183 DLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVI 1242
Query: 1535 SLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLA 1594
V I DN SAI L+KNP+ H RSKHI ++HFIR+ V+ I + V Q A
Sbjct: 1243 GTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHVPGVRQKA 1302
Query: 1595 DIFTKPLVRI 1604
DI TK L +I
Sbjct: 1303 DILTKALGKI 1312
Score = 79.7 bits (195), Expect = 1e-14
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 5 GGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWSTD 64
G +S + P+ + NY W +ME LR + +W I G S D
Sbjct: 16 GSASIQCPMLNSVNYTVWTMRMEAVLRV--HKLWGTIEPG-----------------SAD 56
Query: 65 EKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGVR 124
E+ N AR L ++ +V + + VW+ +K + G VKE R+ +
Sbjct: 57 EEK----NDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMA 112
Query: 125 KFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLP-SVWRPMVTAIT 183
+F+ +M ++ETID+ R + I + +LG+ ++K L+ LP + +V A+
Sbjct: 113 EFDKLKMKDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALE 172
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
Q DLK+ ED+ G ++ +E + D Q + + + + +LEE
Sbjct: 173 QVLDLKTTTFEDIAGRIKTYEDRVWDDDD---------SHEDQGKLMTEVEEEVVDDLEE 223
Query: 244 VHEEEAEDELALISKRIQRMM 264
EE E+ S I R++
Sbjct: 224 EEEEVINKEIKAKSHVIDRLL 244
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 624 bits (1609), Expect = e-178
Identities = 410/1227 (33%), Positives = 631/1227 (51%), Gaps = 122/1227 (9%)
Query: 464 IKSTETFQNIVGSQNE-STKKSGLGFK-DPSKIIGSFV---PKAK-IRVKCC-------- 509
+K ET VG +E STK LG + + SKI+ F+ P+ K I +
Sbjct: 83 MKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLN 142
Query: 510 ---FCDKYG----HNESICHVKKKFIKQNNL-YLSSERSH-------LNRSESS------ 548
F D G + + +C +Q L Y +SE S+ R SS
Sbjct: 143 TTGFEDIVGRMKTYEDRVCDEDDSPEEQGKLMYANSESSYDTRGGRGRGRGRSSGRGRGG 202
Query: 549 ---QKAEKAKKTCFYCNKSDH----------------KRQNVTFRKDLLEELTLKDPTLH 589
Q+ +K+K C+ C+K+ H ++Q D +E L + +
Sbjct: 203 YGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVV-- 260
Query: 590 GYLKFLSCQM*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKI 649
YL S + + WYLD+G S HMTG+ F + G V FG++ + I
Sbjct: 261 -YLNERSVKPKEF-EACSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDI 318
Query: 650 RGKGTIGNLNSAKIE----NVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNK 705
+GKG+I + I +V ++ LK N++S+ Q ++G +V K + +
Sbjct: 319 KGKGSIVLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCL 378
Query: 706 LFFSGSRRKNLYVLELNDMPAEFCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLP 765
L + R LY ++LN +E K + A + + +LV G+
Sbjct: 379 LLRATRSRNRLYKVDLN----------VENVKCL---------QLEAATMVRKELVIGIS 419
Query: 766 KISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVI 825
I EK+ C +C+ GKQ + F + LEL+H DL P+ ++ KRY V+
Sbjct: 420 NIPKEKET-CGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVL 478
Query: 826 VDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 885
+DD +R+ W + LK K E+FE F++F +V+ E G I T R+D GGEF + F+ F +
Sbjct: 479 IDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAK 538
Query: 886 NGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSI 945
GI + + TPQQNGVVER+NRTL M R++L + NY W EA+ S YI+NRV
Sbjct: 539 EGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGT 598
Query: 946 RKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGY 1005
R + N+TPYE++K KP++ + +FGC Y L K D +S ++LG SK Y
Sbjct: 599 RSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAY 658
Query: 1006 RVY-----------NLKTQTVEIS--MHIIFDEYDEHSKPKENEDTEAPTLQNVPVQNTE 1052
R+ N ++T +IS + E+ + +E++D E T +N
Sbjct: 659 RLLDPTNRKIIKWNNSDSETRDISGTFSLTLGEFGNNGI-QESDDIE--TEKNGEESENS 715
Query: 1053 NTVEKEDDQNVQDQ------------SLQSPPRSWRMVG--DHPTDQIIGSTTDGVRTRL 1098
+ E E++ N Q+Q L + RS R VG ++ D ++ + +G + L
Sbjct: 716 HEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLL 775
Query: 1099 SFQDNNMAMISQMEPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRW 1158
+ D EP EA W + KEE+ E+NK W+L+ + +IG +W
Sbjct: 776 AIND---------EPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKW 826
Query: 1159 VFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLF 1218
VF+ K + +G + + KARLVA+GY Q+ GIDYDE FA VAR+E IR+++A AA ++
Sbjct: 827 VFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVH 886
Query: 1219 QMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLI 1278
+DVK+AFL+G L E+VYV+QP GF NK+ V+KL KALYGLKQAPRAW +L+ L
Sbjct: 887 HLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQ 946
Query: 1279 ENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGE 1338
E F + + +++R+ LLIV +YVDD++ + + + F M +FEMS +G+
Sbjct: 947 ELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQ 1006
Query: 1339 LGFFLGLQIKQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISE 1398
L ++LG+++ NGI + QE+Y I+++ M+ + PM L K + K I+E
Sbjct: 1007 LTYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITE 1066
Query: 1399 KEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYR 1458
++YR MIG L Y+ +RPD+ + VG+ +R+ +ESH A+K++ RYL GT GL+ +
Sbjct: 1067 RDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLK 1126
Query: 1459 KGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAA 1518
+G LV Y D+ ++ D + KST+G +L Q I W +KQ + LS+ EAE+++A
Sbjct: 1127 RGFKSGLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAAT 1186
Query: 1519 SCCSQILWVRNQL-EDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHV 1577
Q +W+++ E V I DN SAI L+KN + H RSKHI ++HFIR+ V
Sbjct: 1187 EAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECV 1246
Query: 1578 QKKNIALSFVDTENQLADIFTKPLVRI 1604
+ + + V Q ADI TKPL RI
Sbjct: 1247 ENNLVEVDHVPGVEQRADILTKPLGRI 1273
Score = 87.8 bits (216), Expect = 5e-17
Identities = 86/366 (23%), Positives = 147/366 (39%), Gaps = 53/366 (14%)
Query: 52 EGAVKAKSAWSTDEKAQ--VLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLKIHHE 109
E ++ W T + + N AR L ++ +V + +K +W+ +K +
Sbjct: 2 EATLRVHKVWETIDPGSDDMEKNDMARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNL 61
Query: 110 GTSHVKETRIDIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILR 169
G VKE ++ + +F+ M +NETIDE R + I + SLG+ ++K L+
Sbjct: 62 GAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLK 121
Query: 170 CLP-SVWRPMVTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTP 228
LP + ++ A+ Q DL + ED++G ++ +E
Sbjct: 122 SLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYE-----------------------D 158
Query: 229 SVADEDVQEPQELEEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKS 288
V DED P+E ++ +E R R + R + DKS
Sbjct: 159 RVCDED-DSPEEQGKLMYANSESSYDTRGGR------GRGRGRSSGRGRGGYGYQQRDKS 211
Query: 289 QVTCYGCNKTGHFKNECPD--IKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMAQ 346
+V CY C+KTGH+ +EC D +K ++ + E+ + ED D LM
Sbjct: 212 KVICYRCDKTGHYASECLDRLLKLIKAQ--------------EQQQNNEDDDEIESLMM- 256
Query: 347 SDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDE 406
E V + + K+ E D+ Y N +N ++ S++ E D+
Sbjct: 257 ---HEVVYLNERSVKPKEFEACSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDD 313
Query: 407 SRKTIK 412
SR IK
Sbjct: 314 SRIDIK 319
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 599 bits (1545), Expect = e-171
Identities = 366/1043 (35%), Positives = 541/1043 (51%), Gaps = 61/1043 (5%)
Query: 609 KPWYLDSGCSRHMTGDRNCFLT---FEKKDGGLVTFGNNDKGKIRGKGTIGNLNSA-KIE 664
K W+ DS + H+T N + +E D LV G G TI + N +
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 665 NVQYVEGLKHNLLSISQLCDS-GFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELND 723
V V ++ +LLS+S+LCD V F N + + K+ +G RR LYVLE +
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQE 439
Query: 724 MPAEFCFMSLEKDKWIWHKRAGHISMKTI-----AKLSQLDLVRGLPKISFEKDKICEAC 778
A + + +WH R GH + K + +K Q++ R P +CE C
Sbjct: 440 FVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQINKSRTSP--------VCEPC 491
Query: 779 VKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFL 838
GK + F I PL+ +H DL+ P S G +Y + VDD+SR++W L
Sbjct: 492 QMGKSSRLPF-LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPL 550
Query: 839 KHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTP 898
+K E F +F K V+N+ I +SD GGEF + KT E+GI H SC TP
Sbjct: 551 HNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610
Query: 899 QQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWK 958
QQNG+ ERK+R L E+ +ML S+ FW E+ T+ YI+NR+ + N +PYE
Sbjct: 611 QQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALF 670
Query: 959 NIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEIS 1018
KP S +FG CY KFDP+S + +FLGY++ KGYR + T V IS
Sbjct: 671 GEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYIS 730
Query: 1019 MHIIFDEYD----------------------EHSKPKENEDTEAPT-LQNVPV------- 1048
++IF+E + +H+K E AP L + P+
Sbjct: 731 RNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDLNTYAG 790
Query: 1049 -QNTENTVEKEDDQNVQDQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNM-- 1105
Q TE + E N + + P + + + +Q+I S R++ Q N
Sbjct: 791 SQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQ--EQVINSHAMTTRSKAGIQKPNTRY 848
Query: 1106 ----AMISQMEPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFR 1161
+ ++ EPK++ A+ W E + EE+++ W+LVP D I+ ++WVF+
Sbjct: 849 ALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFK 908
Query: 1162 NKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMD 1221
KL +G + + KARLVA+G++Q+EG+DY ETF+PV R IR++L + K + Q+D
Sbjct: 909 TKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLD 968
Query: 1222 VKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENG 1281
V +AFL+G L E V++ QP GFI+ +KP HV +LTKA+YGLKQAPRAW+D S FL++ G
Sbjct: 969 VSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYG 1028
Query: 1282 FSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGF 1341
F K D +LF + +L + +YVDDI+ + + E+ +++ F M +G +
Sbjct: 1029 FVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRY 1088
Query: 1342 FLGLQIKQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEY 1401
FLG+QI+ ++NG+F+ Q Y DIL++ M++ M TP+ LD S +
Sbjct: 1089 FLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPL--PQQLDNLNSELFAEPTYF 1146
Query: 1402 RGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGS 1461
R + G L YLT +RPDI FAV + S +KRI RY+ GT +GL ++ S
Sbjct: 1147 RSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNS 1206
Query: 1462 SFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCC 1521
+ L AY D+D+AG K R+ST+G C LG LI WS ++Q T+ S+TEAEY +
Sbjct: 1207 TLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAA 1266
Query: 1522 SQILWVRNQLEDYSL-RYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKK 1580
+I W+ L D + +Y +YCDN SA+ LS NP H+RSKH + +H+IR+ V
Sbjct: 1267 REITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALG 1326
Query: 1581 NIALSFVDTENQLADIFTKPLVR 1603
I + QLAD+FTK L R
Sbjct: 1327 LIETQHISATFQLADVFTKSLPR 1349
Score = 34.7 bits (78), Expect = 0.46
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 17 SNYYFWKGKMELFLRSQDNDMWAVITDGDFVPTTKEGAVKAKSAWSTDEKAQVLLNS--- 73
SNY WK + E L SQ + + P+ V + T E+ L S
Sbjct: 24 SNYLLWKTQFESLLSSQ--KLIGFVNGAVNAPSQSRLVVNGE---VTSEEPNPLYESWFC 78
Query: 74 ---KARLFLSCALTMEESERVDECTNAKEVWDTLKIHHEGTSHVKETRIDIGVRKFEVFE 130
R +L L+ E V + ++++W +L + +S +E + ++
Sbjct: 79 TDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQL----- 133
Query: 131 MSENETIDEMYAR-FTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAI-TQAKDL 188
+S+ E +Y R F TI + + S+GK +I L L + P+ T I + L
Sbjct: 134 LSKKEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKL 193
Query: 189 KSMNLEDLIGSLRAHEVVLQ 208
+ D++ ++ + LQ
Sbjct: 194 PTPTFNDVVSEVQGFDSKLQ 213
>At1g37110
Length = 1356
Score = 590 bits (1521), Expect = e-168
Identities = 362/1102 (32%), Positives = 582/1102 (51%), Gaps = 61/1102 (5%)
Query: 548 SQKAEKAKKTCFYCNKSDHKRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*VLPQGAR 607
S+ K K C+YC K H +++ RK +E + + S + V Q +
Sbjct: 246 SRSNSKTKVPCWYCKKEGHVKKDCYSRKKKMESEGQGEAGVITEKLVFSEALSVNEQMVK 305
Query: 608 TKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIG---NLNSAKI- 663
W LDSGC+ HMT R+ F++F++K + G++ + +G+GTI + + KI
Sbjct: 306 DL-WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKIL 364
Query: 664 ENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELND 723
ENV+YV L+ NL+S L G+ + +VR +NK GS LYVL+ +
Sbjct: 365 ENVKYVPHLRRNLISTGTLDKLGYR--HEGGEGKVRYFKNNKTALRGSLSNGLYVLDGST 422
Query: 724 MPAEFCFMSLEKDKW-IWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGK 782
+ +E C +K K +WH R GH+SM + L+ L+ + + + CE CV GK
Sbjct: 423 VMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLI---DRKEINELEFCEHCVMGK 479
Query: 783 QVKSSFKTIEFISTQKPLELLHIDLF-APVQTASLTGKRYGFVIVDDFSRFTWVLFLKHK 841
K SF + S + L +H DL+ +P T S++GK+Y I+DD +R W+ FLK K
Sbjct: 480 SKKVSFNVGKHTS-EDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYFLKSK 538
Query: 842 DESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQN 901
DE+F+ F + V+N+ + +R+D+G EF N+ F ++ E+GI+ + +C TPQQN
Sbjct: 539 DETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQN 598
Query: 902 GVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIK 961
GV ER NRT+ E R +LN+S VE FWAEA T+ Y++NR + + P E+W N K
Sbjct: 599 GVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNRK 658
Query: 962 PSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHI 1021
P + FG Y+ ++ GK P++ K FLGY +KGY+V+ L+ + IS ++
Sbjct: 659 PGYKHLRKFGSIAYVHQDQ---GKLKPRALKGFFLGYPAGTKGYKVWLLEEEKCVISRNV 715
Query: 1022 IFDE----------YDEHSKPKENEDTEAPTLQN------------------VPVQNTEN 1053
+F E D+ + E T + QN P+ E
Sbjct: 716 VFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQ 775
Query: 1054 TVEKEDDQNVQDQSLQSPPR----SWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMIS 1109
+ + E++ +++ ++P R ++++ D I T + ++F +
Sbjct: 776 SSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVENCI 835
Query: 1110 QMEPKSINEAIID---DSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDE 1166
EP+S EA+ + W +E+ +N W+LV +D+ IIG RW+F+ K
Sbjct: 836 VQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGI 895
Query: 1167 EG-KVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSA 1225
G + R KARLVA+GY Q+EG+DY E FAPV + +IRIL++ K ++L QMDVK+
Sbjct: 896 PGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTT 955
Query: 1226 FLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRG 1285
FL+G L EE+Y+ QP GF++ N V +L K+LYGLKQ+PR W R F+ F R
Sbjct: 956 FLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRS 1015
Query: 1286 KIDTTLFRK-THNTDLLIVQVYVDD-IIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFL 1343
+ D ++ K D + + +YVDD +I GA+K ++ + +EFEM MG L
Sbjct: 1016 EHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEI-NRVKEQLSTEFEMKDMGGASRIL 1074
Query: 1344 GLQIKQHSNG--IFISQEKYIKDILKKYKMNEAKIMSTPM---HPSSSLDKDESGKSISE 1398
G+ I + G + +SQE YI+ +L ++ M+ AK+ + P+ +++ +++
Sbjct: 1075 GIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDV 1134
Query: 1399 KEYRGMIGSLLY-LTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWY 1457
Y +GS++Y + +RPD+ +A+ L +R+ + H AVK + RYL G DL L +
Sbjct: 1135 VPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVF 1194
Query: 1458 RKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSA 1517
K F + YCD++YA D R+S SG +G + W Q + +STTEAEY++
Sbjct: 1195 TKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIAL 1254
Query: 1518 ASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHV 1577
A + +W++ L+D ++ V I+CD+ SAI LSKN + H R+KHI+++ ++IRD V
Sbjct: 1255 AEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVV 1314
Query: 1578 QKKNIALSFVDTENQLADIFTK 1599
+ ++ + + T D TK
Sbjct: 1315 ESGDVDVLKIHTSRNPVDALTK 1336
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 573 bits (1477), Expect = e-163
Identities = 331/1012 (32%), Positives = 543/1012 (52%), Gaps = 31/1012 (3%)
Query: 611 WYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSAKIENVQYVE 670
W +DSG + H++ DR+ F + + V KI G GT+ + ++NV ++
Sbjct: 431 WVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIP 490
Query: 671 GLKHNLLSISQLCDS-GFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAEFC 729
+ NL+SIS L D G VIF N CE++ ++ G R NLY+L++ D
Sbjct: 491 EFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGDQSIS-- 548
Query: 730 FMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSSFK 789
++ D +WH+R GH S++ + +S G + + C C KQ K SF
Sbjct: 549 -VNAVVDISMWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHLAKQRKLSFP 604
Query: 790 TIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQ 849
T + ++ +LLHID++ P ++ G +Y IVDD SR TW+ LK K E F
Sbjct: 605 TSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFP 663
Query: 850 NFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVERKNR 909
F ++V+N+ + VRSD+ E + F +F+ E GI SC TP+QN VVERK++
Sbjct: 664 AFIQQVENQYKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQNSVVERKHQ 720
Query: 910 TLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISYFHI 969
+ +AR ++ +S V W + + T+ +++NR + ++NKTPYE+ P
Sbjct: 721 HILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRT 780
Query: 970 FGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIF-DEYDE 1028
FGC CY + ++ KF P+S +FLGY + KGY++ +L++ TV IS ++ F +E
Sbjct: 781 FGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFP 840
Query: 1029 HSKPKENEDTEAPTLQNVPVQNTENTVEKEDDQNVQDQSLQSPPR--SWRM------VGD 1080
+K +E + VPV + + ++ Q PP+ S R+ + D
Sbjct: 841 LAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQRVRKPPAHLND 900
Query: 1081 HPTDQIIGSTTDGVRTRLSFQD---NNMAMISQME----PKSINEAIIDDSWIEVMKEEL 1133
+ + + + + +S+ ++M I+ + P + EA W E + E+
Sbjct: 901 YHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEI 960
Query: 1134 SQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDET 1193
E+ W + + K +G +WVF K +G + R KARLVA+GY Q+EG+DY +T
Sbjct: 961 GAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDT 1020
Query: 1194 FAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKE----KP 1249
F+PVA++ I++LL +A K L Q+DV +AFLNG L EE+++ P G+ ++
Sbjct: 1021 FSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPS 1080
Query: 1250 NHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDD 1309
N V +L +++YGLKQA R W+ + S+ L+ GF + D TLF K ++ + +IV VYVDD
Sbjct: 1081 NVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVDD 1140
Query: 1310 IIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYIKDILKKY 1369
I+ +T + + + F++ +G+L +FLGL++ + + GI I Q KY ++L+
Sbjct: 1141 IVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQST 1200
Query: 1370 KMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQ 1429
M K +S PM P+ + KD+ ++YR ++G L+YLT +RPDI FAV +F
Sbjct: 1201 GMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFS 1260
Query: 1430 TCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQF 1489
+ + +HLTA R+ +Y+ GT GL+Y S L + D+D+A + R+ST+ F
Sbjct: 1261 SAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMF 1320
Query: 1490 LGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTS 1549
+G +LI W +KQ+T+ S+ EAEY + A +++W+ L +Y D+T+
Sbjct: 1321 VGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPILYSDSTA 1380
Query: 1550 AINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPL 1601
AI ++ NP+ H R+KHI++ H +R+ + + L V TE+Q+ADI TKPL
Sbjct: 1381 AIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPL 1432
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 571 bits (1471), Expect = e-162
Identities = 338/1014 (33%), Positives = 538/1014 (52%), Gaps = 39/1014 (3%)
Query: 611 WYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSAKIENVQYVE 670
W +DSG + H++ DR F T + V +I G GT+ ++NV ++
Sbjct: 442 WVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQNVLFIP 501
Query: 671 GLKHNLLSISQLC-DSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAEFC 729
+ NL+SIS L D G VIF P+ C+++ + G R NLYVL D +
Sbjct: 502 EFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVL---DTQSPAI 558
Query: 730 FMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSSFK 789
++ D +WHKR GH S + LS+ V G + +K C C KQ K SF
Sbjct: 559 SVNAVVDVSVWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLAKQKKLSFP 615
Query: 790 TIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQ 849
+ I ELLHID++ P ++ G +Y IVDD SR TW+ LK K + F
Sbjct: 616 SANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFP 674
Query: 850 NFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVERKNR 909
F V+N+ + +VRSD+ E +F F+ GI SC TP+QN VVERK++
Sbjct: 675 AFIDLVENQYDTRVKSVRSDNAKEL---AFTEFYKAKGIVSFHSCPETPEQNSVVERKHQ 731
Query: 910 TLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISYFHI 969
+ +AR ++ +SN+ +W + + T+ +++NR + NKTP+E+ P S
Sbjct: 732 HILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKT 791
Query: 970 FGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDEH 1029
FGC CY + ++ KF P+S +FLGY KGY++ +L++ V IS ++ E+ E
Sbjct: 792 FGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNV---EFHEE 848
Query: 1030 SKPKENEDTEAPTLQNV-----PVQNTENTVEKEDDQNVQDQSLQSPPRSWRM---VGDH 1081
P + A T +V P+ + + + + S R + + D+
Sbjct: 849 LFPLASSQQSATTASDVFTPMDPLSSGNSITSHLPSPQISPSTQISKRRITKFPAHLQDY 908
Query: 1082 PTDQIIGSTTDGVRTRLSFQD---NNMAMISQME----PKSINEAIIDDSWIEVMKEELS 1134
+ + + + LS+ ++M I+ + P+S +EA W + +E+
Sbjct: 909 HCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIG 968
Query: 1135 QFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETF 1194
ER W + K +G +WVF K +G + R KAR+VA+GY Q+EG+DY ETF
Sbjct: 969 AMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETF 1028
Query: 1195 APVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKE----KPN 1250
+PVA++ +++LL +A K L Q+D+ +AFLNG L E +Y+ P G+ + + PN
Sbjct: 1029 SPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPN 1088
Query: 1251 HVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDI 1310
V +L K++YGLKQA R W+ + S L+ GF + D TLF + ++ +++ VYVDDI
Sbjct: 1089 VVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDI 1148
Query: 1311 IFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYIKDILKKYK 1370
+ +T + + + +++ F++ +G L +FLGL++ + S GI +SQ KY ++L
Sbjct: 1149 VIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSAD 1208
Query: 1371 MNEAKIMSTPMHPSSSLDKDESGKSISEKE-YRGMIGSLLYLTASRPDIVFAVGLCARFQ 1429
M + K S PM P+ L K++ G + +KE YR ++G L+YLT +RPDI FAV +F
Sbjct: 1209 MLDCKPSSIPMTPNIRLSKND-GLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFS 1267
Query: 1430 TCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQF 1489
+ + +HL AV ++ +Y+ GT GL+Y L Y DAD+ R+ST+G F
Sbjct: 1268 SAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMF 1327
Query: 1490 LGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLR-YTSVPI-YCDN 1547
+G +LI W +KQ T+ S+ EAEY + A ++ W+ L +LR ++ VPI Y D+
Sbjct: 1328 VGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLL--LALRVHSGVPILYSDS 1385
Query: 1548 TSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPL 1601
T+A+ ++ NP+ H R+KHIEI H +R+ + + L V T++Q+ADI TKPL
Sbjct: 1386 TAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPL 1439
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 567 bits (1460), Expect = e-161
Identities = 385/1282 (30%), Positives = 634/1282 (49%), Gaps = 128/1282 (9%)
Query: 373 LYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDESRKTIKILQDSHFDMSEKQREINRKQ 432
LY S L NR + K S E ++ DE + I L++++ +S++ + I
Sbjct: 106 LYMSKALPNRIYQKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILL-- 163
Query: 433 KGIMSVPSEVQKENILLKKEVETLKKVLTGFIKSTETFQNIVGSQNESTKKSGLGFKDPS 492
+MS+P + LK + + L + + + + +GS +S K G
Sbjct: 164 --LMSLPKPFDQLRDTLKYGLGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGL---- 217
Query: 493 KIIGSFVPKAKIRVKCCFCDKYGHNESICHVKKKFIKQNNLYLSSERSHLNRSESSQKAE 552
VK+K + + +R + N ++ S+
Sbjct: 218 -----------------------------FVKEKTETRGR---TEQRGNNNNNKKSRSKS 245
Query: 553 KAKKTCFYCNKSDHKRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*VLPQGARTKPWY 612
++KK C+ C +S + N + L L +H W
Sbjct: 246 RSKKGCWICGESSNGSSNYSEANGLYVSEALSSTDIH-----------------LEDEWV 288
Query: 613 LDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSA----KIENVQY 668
+D+GCS HMT R F + GG V GN K+RG GTI N A ++ NV+Y
Sbjct: 289 MDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVRY 348
Query: 669 VEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAE- 727
+ + NLLS+ SG+ FK + + + + + R LY+L+ + E
Sbjct: 349 IPEMDRNLLSLGTFEKSGYS--FKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRPVTEES 406
Query: 728 FCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSS 787
+ + D +WH+R GH+S K + L + L L K K + CE C+ GK +
Sbjct: 407 LSVVKRQDDTILWHRRLGHMSQKNMDLLLKKGL---LDKKKVSKLETCEDCIYGKAKRIG 463
Query: 788 FKTIEFISTQKPLELLHIDLF-APVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFE 846
F + T++ LE +H DL+ AP SL +Y +DD++R + FLK KDE+F+
Sbjct: 464 FNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFD 522
Query: 847 AFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVER 906
F + V+N+ I T+R+D+G EF N SF F + GI + +CA TPQQNGV ER
Sbjct: 523 KFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAER 582
Query: 907 KNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISY 966
NRTL E R+ML++S + FWAEA +T+ ++N+ + + P + W P SY
Sbjct: 583 MNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSY 642
Query: 967 FHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEY 1026
FGC ++ + GK +P++ K I +GY KGY+++ L+ + +S ++IF E
Sbjct: 643 LRRFGCIAFVHTDD---GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQEN 699
Query: 1027 DEH-----SKPKENEDTEAP--TLQNVPVQNTENTVEKEDDQNVQDQSLQSPPRSWRMVG 1079
+ SK E ++ EAP + ++ + + E DD V+ QS +P +
Sbjct: 700 ASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSPATTQT- 758
Query: 1080 DHPTDQIIGSTTDGVRTRLSFQ---DNNMAMI----------------------SQMEPK 1114
+ + S TD +++ LS+Q D + I ++EP
Sbjct: 759 ---YSEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPA 815
Query: 1115 SINEAIIDDSWIE---VMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLD----EE 1167
+EA +W + M EE+ +N W +V Q + +IG+RW+++ KL EE
Sbjct: 816 DYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEE 875
Query: 1168 GKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFL 1227
G R KARLVA+GY Q++GIDY E FAPV + +IRIL++ A + ++L Q+DVK+AFL
Sbjct: 876 G---RFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFL 932
Query: 1228 NGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKI 1287
+G L E++Y+ P G+ K + V L K+LYGLKQAP+ W ++ + ++ E GF R
Sbjct: 933 HGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLY 992
Query: 1288 DTTLF-RKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQ 1346
D+ + ++ + + + +YVDD++ A + + + F+M +G LG++
Sbjct: 993 DSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGME 1052
Query: 1347 I--KQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPMHP-----SSSLDKDESGKSISEK 1399
I + N +++SQ Y+ IL+ Y M E+K + TP+ +++++K E + +
Sbjct: 1053 IIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYMKS 1112
Query: 1400 -EYRGMIGSLLY-LTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWY 1457
Y +GS++Y + +RPD+ + VG+ +R+ + H VK + RY+ G+ L Y
Sbjct: 1113 IPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQY 1172
Query: 1458 RKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSA 1517
++ S F +V YCDAD+A K R+S +G LG + I W +Q + LSTTEAEY+S
Sbjct: 1173 KRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSL 1232
Query: 1518 ASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHV 1577
+ +W++ L+++ SV I+CD+ SAI LSKN + H R+KHI++++ +IRD +
Sbjct: 1233 TEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRDII 1292
Query: 1578 QKKNIALSFVDTENQLADIFTK 1599
+ + +DTE ADIFTK
Sbjct: 1293 ANGDGDVVKIDTEKNPADIFTK 1314
Score = 32.7 bits (73), Expect = 1.7
Identities = 21/104 (20%), Positives = 49/104 (46%)
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+K F+MSEN +I+ F I+ ++ + S D+ +L LP + + +
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLK 179
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQT 227
+++L++++ ++ + E+ L +K K + L ++T
Sbjct: 180 YGLGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEKT 223
>At3g45520 copia-like polyprotein
Length = 1363
Score = 566 bits (1459), Expect = e-161
Identities = 363/1157 (31%), Positives = 587/1157 (50%), Gaps = 97/1157 (8%)
Query: 525 KKFIK--QNNLYLSSERSHLNRSESSQKAE------KAKKTCFYCNKSDH---------K 567
KK IK LY+ + + RSE K + K+K+ C+ C + H K
Sbjct: 207 KKSIKGQAEGLYVKDKAENRGRSEQKDKGKGKRSKSKSKRGCWICGEDGHLKSTCPNKNK 266
Query: 568 RQNVTFRKDLLEELTLKDPTLHGYLKFL-SCQM*VLPQGARTK-----PWYLDSGCSRHM 621
Q + E K + G + F+ S M V + T W +D+GC HM
Sbjct: 267 PQFKNQGSNKGESSGGKGNLVEGSVNFVESAGMFVSEALSSTDIHLEDEWIMDTGCIYHM 326
Query: 622 TGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLN----SAKIENVQYVEGLKHNLL 677
T R F+++ GG V GN +++G GT+ +N + ++NV+Y+ + NLL
Sbjct: 327 THKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNVRYIPDMDRNLL 386
Query: 678 SISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKDK 737
S+ +G + F+ +R S N++ G R LY+L E ++ D
Sbjct: 387 SLGTFEKAGHK--FESENGMLRIKSGNQVLLEGRRYDTLYILHGKPATDESLAVARANDD 444
Query: 738 WI-WHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEACVKGKQVKSSFKTIEFIST 796
+ WH+R H+S K ++ L + L K CE C+ G+ K F + T
Sbjct: 445 TVLWHRRLCHMSQKNMSLLIKKGF---LDKKKVSMLDTCEDCIYGRAKKIGFNLAQH-DT 500
Query: 797 QKPLELLHIDLF-APVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRV 855
+K LE +H DL+ AP SL +Y +DD++R WV FLK KDE+FE F ++ V
Sbjct: 501 KKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLV 560
Query: 856 QNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCARTPQQNGVVERKNRTLQEMA 915
+N+ G + T+R+D+G EF N F F +E G + + +CA TPQQNGVVER NRT+ E
Sbjct: 561 ENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKV 620
Query: 916 RTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCY 975
R+ML +S + FWAEA +T+ ++N+ + + P + W P SY +GC +
Sbjct: 621 RSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTF 680
Query: 976 ILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE---YDEHSKP 1032
+ + GK + ++ K + +GY + KGY+V+ ++ + +S ++ F E Y + +
Sbjct: 681 VHTDG---GKLNLRAKKGVLIGYPSGVKGYKVWLIEEKKCVVSRNVSFQENAVYKDLMQR 737
Query: 1033 KEN----EDTEAPTLQNVPVQNTEN----------------------TVEKEDDQNVQDQ 1066
KE ED A + ++ ++ ++ T + + ++++
Sbjct: 738 KEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQSQAQVTPATRGAVTSTPPRYETDDIEET 797
Query: 1067 SLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMIS--------QMEPKSINE 1118
+ P S+ +V D +I R F D + + +EP E
Sbjct: 798 DVHQSPLSYHLVRDRERREI--------RAPRRFDDEDYYAEALYTTEDGDAVEPADYKE 849
Query: 1119 AIIDDSWIE---VMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEG-KVVRNK 1174
A+ D++W + M EE+ +N W V + + IIG+RW+++ K G + R K
Sbjct: 850 AVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFK 909
Query: 1175 ARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEE 1234
ARLVA+GY Q+EG+DY E FAPV + +IRILL+ A ++++L Q+DVK+AFL+G L E+
Sbjct: 910 ARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEK 969
Query: 1235 VYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRK 1294
+Y+ P G + K N V L K+LYGLKQAPR W ++ + ++ E GF R D+ + K
Sbjct: 970 IYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTK 1029
Query: 1295 THNTD-LLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQI--KQHS 1351
+ D + + YVDD++ A ++ + + +FEM +G LG++I + +
Sbjct: 1030 KLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDREA 1089
Query: 1352 NGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMI------ 1405
+++SQE Y+ +LK + M E+K TP+ + K +E+EY +
Sbjct: 1090 GVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATEEKLSTEEEYMNSVPYSSAV 1149
Query: 1406 GSLLY-LTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFD 1464
GS++Y + +RPD+ + VG+ +RF + + H VK + RY+ GT D L Y++ S F
Sbjct: 1150 GSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSDFS 1209
Query: 1465 LVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQI 1524
+ YCDADYA D +R+S +G LG I W Q + S+TE EY+S +
Sbjct: 1210 ICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEA 1269
Query: 1525 LWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIAL 1584
+W++ L+D+ +V I+CD+ SAI LSKN + H R+KHI++K HFIR+ + + +
Sbjct: 1270 IWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEV 1329
Query: 1585 SFVDTENQLADIFTKPL 1601
S + TE ADIFTK L
Sbjct: 1330 SKISTEKNPADIFTKVL 1346
Score = 35.4 bits (80), Expect = 0.27
Identities = 40/197 (20%), Positives = 74/197 (37%), Gaps = 44/197 (22%)
Query: 124 RKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAIT 183
+K F+MSEN +I+ F IV ++ +L S D+ +L LP + + +
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLK 179
Query: 184 QAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEE 243
+ ++L+++ ++ + E+ K K +K A E + + E
Sbjct: 180 YSSGKTVLSLDEVAAAIYSRELEFGSVK--KSIKGQA------------EGLYVKDKAEN 225
Query: 244 VHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKN 303
E +D+ K KS+ C+ C + GH K+
Sbjct: 226 RGRSEQKDKG--------------------------KGKRSKSKSKRGCWICGEDGHLKS 259
Query: 304 ECPDIKKVQRKPPFKKK 320
CP+ + KP FK +
Sbjct: 260 TCPN----KNKPQFKNQ 272
>At1g70010 hypothetical protein
Length = 1315
Score = 565 bits (1455), Expect = e-160
Identities = 337/981 (34%), Positives = 525/981 (53%), Gaps = 53/981 (5%)
Query: 663 IENVQYVEGLKHNLLSISQLCDS-GFEVIFKPNICEVRQASSNKLFFSGSRRKNLYVLEL 721
+ +V ++ K NLLS+S L S G + F C ++ A+ + G + NLY+++L
Sbjct: 325 LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDL 384
Query: 722 NDMPAEFCFMSLE----KDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKICEA 777
+ + S+ +WHKR GH S++ + +S L PK D C
Sbjct: 385 DSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSL---LSFPKQKNNTDFHCRV 441
Query: 778 CVKGKQVKSSFKTIEFIS----TQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFT 833
C KQ K + F+S + +P +L+HID + P + G RY IVDD+SR T
Sbjct: 442 CHISKQ-----KHLPFVSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRAT 496
Query: 834 WVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFS 893
WV L++K + F V+N+ I VRSD+ E +F F+ GI S
Sbjct: 497 WVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPEL---NFTQFYHSKGIVPYHS 553
Query: 894 CARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTP 953
C TPQQN VVERK++ + +AR++ +S++ +W + I T+ Y++NR+ + +K P
Sbjct: 554 CPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCP 613
Query: 954 YELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQ 1013
+E+ P+ + +FGC CY + + KF P++ F+GY + KGY++ +L+T
Sbjct: 614 FEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETH 673
Query: 1014 TVEISMHIIFDEY------DEHSKPKEN---EDTEAPTLQ-----NVPVQNTENTVE--- 1056
++ +S H++F E + S+ ++N + P +Q +V ++ ++VE
Sbjct: 674 SIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVEILP 733
Query: 1057 -KEDDQNVQDQSLQSPPRSWRM---VGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQM- 1111
NV + S+Q+ R + + D+ ++ ST +R LS+ N ++ +
Sbjct: 734 SANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLA 793
Query: 1112 ------EPKSINEAIIDDSWIEVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLD 1165
EP + EA W + M E E W + DK IG RW+F+ K +
Sbjct: 794 CLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYN 853
Query: 1166 EEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSA 1225
+G V R KARLVAQGY Q+EGIDY+ETF+PVA+L ++++LL AA + L Q+D+ +A
Sbjct: 854 SDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNA 913
Query: 1226 FLNGFLNEEVYVSQPPGFINKE----KPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENG 1281
FLNG L+EE+Y+ P G+ +++ PN V +L K+LYGLKQA R WY + S+ L+ G
Sbjct: 914 FLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLG 973
Query: 1282 FSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGF 1341
F + D T F K + L V VY+DDII + + + M+S F++ +GEL +
Sbjct: 974 FIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKY 1033
Query: 1342 FLGLQIKQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEY 1401
FLGL+I + GI ISQ KY D+L + K S PM PS D G + Y
Sbjct: 1034 FLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPY 1093
Query: 1402 RGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGS 1461
R +IG L+YL +RPDI FAV A+F +++HL AV +I +Y+ GT GL+Y S
Sbjct: 1094 RRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATS 1153
Query: 1462 SFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCC 1521
L Y +ADY + R+STSG C FLG +LI W RKQ+ + S+ EAEY S +
Sbjct: 1154 ELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVAT 1213
Query: 1522 SQILWVRNQLEDYSLRYTS-VPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKK 1580
+++W+ N L++ + + ++CDN +AI+++ N + H R+KHIE H +R+ + K
Sbjct: 1214 DELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRERLLKG 1273
Query: 1581 NIALSFVDTENQLADIFTKPL 1601
L ++TE Q+AD FTKPL
Sbjct: 1274 LFELYHINTELQIADPFTKPL 1294
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 559 bits (1441), Expect = e-159
Identities = 361/1150 (31%), Positives = 585/1150 (50%), Gaps = 104/1150 (9%)
Query: 536 SSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQN----VTFRKDLLE-------ELTLK 584
++ + + ++ S K+ K+ C+ C K H ++ + K + L
Sbjct: 199 NNNQGNKGKNRSRSKSADGKRVCWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKS 258
Query: 585 DPTLHGYLKFLSCQM*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNN 644
+ + L+ ++ + W LD+GCS HMT ++ F F++ G V GN+
Sbjct: 259 TEAFNPAMVLLATDETLVVTDSIANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGND 318
Query: 645 DKGKIRGKGTIGNLNS----AKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQ 700
++G G+I NS + +V+Y+ + NL+S+ L D G + I ++ +
Sbjct: 319 TYSPVKGIGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVK 378
Query: 701 ASSNKLFFSGSRRKNLYVLELNDMPAEFCFMSLEKDKW-IWHKRAGHISMKTIAKLSQLD 759
S L G +R LY+L+ E + KD+ +WH R GH+S K + L +
Sbjct: 379 GCSTIL--KGQKRDTLYILDGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKG 436
Query: 760 LVRGLPKISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLF-APVQTASLTG 818
+R + ++ + CE CV GKQ + SF + ++ +K L +H DL+ +P ASL
Sbjct: 437 CLR---REVIKELEFCEDCVYGKQHRVSFAPAQHVTKEK-LAYVHSDLWGSPHNPASLGN 492
Query: 819 KRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENAS 878
+Y VDD+SR W+ FL+ KDE+FE F + K V+N+ + +R+D+G E+ N
Sbjct: 493 SQYFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHY 552
Query: 879 FKTFFDENGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCY 938
F+ F E GI + +CA TPQQNG+ ER NRT+ + R+ML+ S +E FWAEA +T+ Y
Sbjct: 553 FEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVY 612
Query: 939 ILNRVSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGY 998
++NR + P E W P +S FGC YI ++ GK +P+S K IF Y
Sbjct: 613 LINRSPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQ---GKLNPRSKKGIFTSY 669
Query: 999 STTSKGYRVYNLKTQTVEISMHIIFDEY-------------------------------- 1026
KGY+V+ L+ + IS ++IF E
Sbjct: 670 PEGVKGYKVWVLEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQE 729
Query: 1027 --------DEHSKPKENEDTEAPTLQNVPVQNTENTVEKEDDQNVQDQSLQSPPRSWRMV 1078
++S P E + P L N P + + E+ED V+D S ++++V
Sbjct: 730 FTDQGGATQDNSNPSEATTSHNPVL-NSPTHSQDEESEEEDSDAVEDLS------TYQLV 782
Query: 1079 GDHPTDQIIGSTTDGVRTRLSFQDNNMAMIS-------QMEPKSINEAIID---DSWIEV 1128
D ++ + ++NM + + EPKS EA++D + W
Sbjct: 783 RDR--------VRRTIKANPKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAA 834
Query: 1129 MKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEG-KVVRNKARLVAQGYNQQEG 1187
MKEE+ +N W+LV + +IG RWVF K G + R ARLVA+G+ Q+EG
Sbjct: 835 MKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEG 894
Query: 1188 IDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKE 1247
+DY+E F+PV + +IR LL+ H +++L QMDVK+AFL+GFL EE+Y++QP GF K
Sbjct: 895 VDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKR 954
Query: 1248 KPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLI-VQVY 1306
N V L ++LYGLKQ+PR W R F+ ++R D+ ++ K N D I + +Y
Sbjct: 955 GSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLY 1014
Query: 1307 VDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNG--IFISQEKYIKD 1364
VDD++ + E L+ EFEM +G+ LG++I + + + +SQE Y+K
Sbjct: 1015 VDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKK 1074
Query: 1365 ILKKYKMNEAKIMSTP------MHPSSSLDKDESGKSISEKEYRGMIGSLLY-LTASRPD 1417
+L+ ++M+ AK +STP + ++ + +E + + Y IGS++Y + +RPD
Sbjct: 1075 VLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPD 1134
Query: 1418 IVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDK 1477
+ +++G+ +RF + + H AVK + RY+ GT L +RK F L YCD+DY +
Sbjct: 1135 LAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNF 1194
Query: 1478 VERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLR 1537
R+S +G +G I W + Q + +S+TEAEY++ + LW++ +
Sbjct: 1195 DTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHS 1254
Query: 1538 YTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIF 1597
V ++ D+ SAI L+KN + H R+KHI+I+ HFIRD + I + + TE A+IF
Sbjct: 1255 QDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIF 1314
Query: 1598 TK--PLVRID 1605
TK PL + +
Sbjct: 1315 TKTVPLAKFE 1324
Score = 42.0 bits (97), Expect = 0.003
Identities = 37/153 (24%), Positives = 69/153 (44%), Gaps = 8/153 (5%)
Query: 64 DEKAQVLLNSKARLFLSCALTMEESERVDECTNAKEVWDTLK--IHHEGTSHVKETRIDI 121
DE A++ KA+ + + + +++ C A E W+TL H T++
Sbjct: 38 DEVARLERCDKAKNVIFLNVADKVLRKIELCKTAAEAWETLDRLFMIRSLPHRVYTQLS- 96
Query: 122 GVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTA 181
F F+M EN+ IDE F IV ++ L + + +L LP+ + +V
Sbjct: 97 ----FYTFKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVET 152
Query: 182 ITQAKDLKSMNLEDLIGSLRAHEVVL-QGDKPV 213
+ + + + L+D++ + R E L Q ++PV
Sbjct: 153 MKYSNSREKLRLDDVMVAARDKERELSQNNRPV 185
>At4g03810 putative retrotransposon protein
Length = 964
Score = 528 bits (1359), Expect = e-149
Identities = 335/967 (34%), Positives = 509/967 (51%), Gaps = 52/967 (5%)
Query: 662 KIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLFFSGSRRKN-LYVLE 720
+++N YV + N++S+S L GF K C + + +F+ + N L+VL
Sbjct: 4 ELKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDR---DDMFYGSAPLDNGLHVLN 60
Query: 721 LNDMPAEFCFMSLEKDK-----WIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDKIC 775
MP K ++WH R GHI+ K I KL L L +E + C
Sbjct: 61 -QSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGL---LNSFDYESYETC 116
Query: 776 EACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGKRYGFVIVDDFSRFTWV 835
E+C+ GK K+ F T L L+H D+ P+ T++ +Y DDFSR+ +V
Sbjct: 117 ESCLLGKMTKAPF-TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYV 175
Query: 836 LFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENGIKHNFSCA 895
+KHK +SFE F+ F VQN+ G +I +RSD GGE+ + F E GI +
Sbjct: 176 YLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPP 235
Query: 896 RTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIRKVLNKTPYE 955
TPQ NGV ER+NRTL +M R+M++ +++ + FW A+ TS ++LNR + V KTPYE
Sbjct: 236 GTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-EKTPYE 294
Query: 956 LWKNIKPSISYFHIFGCYCYILNN-KEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQT 1014
+W P++S+ I+GC Y +KLG PKSDK F+GY +KGY Y+
Sbjct: 295 IWTGKVPNLSFLKIWGCESYAKRLITDKLG---PKSDKCYFVGYPKETKGYYFYHPTDNK 351
Query: 1015 VEISMHIIFDEYDEHSKPKEN-----EDTEAPTLQNVPVQNTENTVEKEDDQNVQDQSLQ 1069
V + + F E + SK E+ P +VP E+ + D + V + L
Sbjct: 352 VFVVRNGAFLEREFLSKGTSGSKVLLEEVREPQ-GDVPTSQEEHQL---DLRRVVEPILV 407
Query: 1070 SPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAII---DDSWI 1126
P H D+ D D+ + MI EP S EA++ D W+
Sbjct: 408 EPEVRRSERSRHEPDRFRDWVMD---------DHALFMIESDEPTSYEEALMGPDSDKWL 458
Query: 1127 EVMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQE 1186
E K E+ +NKVW LV I +W+F+ K+D +G + KA LVA+GY Q
Sbjct: 459 EAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVH 518
Query: 1187 GIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINK 1246
GIDYDET++PVA L++IRILLA AAH +++QMDVK+AFLNG L E VY++QP GF
Sbjct: 519 GIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVP 578
Query: 1247 EKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVY 1306
E V KL +++YGLKQA R+W R + + E F R + + +++KT + + + +Y
Sbjct: 579 EAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLY 638
Query: 1307 VDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQI-KQHSNGIF-ISQEKYIKD 1364
VDDI+ I + + + S F M MGE + LG++I + N I +SQ+ YI
Sbjct: 639 VDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDK 698
Query: 1365 ILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKE------YRGMIGSLLY-LTASRPD 1417
+L ++ M+++K PM +L K + + E+E Y IGS++Y + +RPD
Sbjct: 699 VLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPD 758
Query: 1418 IVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDK 1477
+ A+ + +R+Q+ ESH V+ IF+YL T D L Y + Y DA + DK
Sbjct: 759 VACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDK 818
Query: 1478 VERKSTSGSCQFLGQALIGWSCRKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLR 1537
+ +S SG L + W KQ+T+ STTEAEY++A+ +++W+R + + +
Sbjct: 819 DDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVV 878
Query: 1538 YT---SVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLA 1594
+ + +YCDN AI +K P H +SKHI+ ++H IR+ + + ++ +S V T+ +A
Sbjct: 879 PSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVA 938
Query: 1595 DIFTKPL 1601
D FTKPL
Sbjct: 939 DHFTKPL 945
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 517 bits (1331), Expect = e-146
Identities = 330/1119 (29%), Positives = 554/1119 (49%), Gaps = 93/1119 (8%)
Query: 543 NRSESSQKAEKAKKTCFYCNKSDHKRQNVTFRKDLLEELTLKDPTLHGYLKFLSCQM*-- 600
N+++S K++ A KTC+ C K H ++ K+ ++ + + G ++ ++
Sbjct: 236 NKNKSRSKSKGAGKTCWICGKEGHFKKQCYVWKERNKQGSTSE---RGEASTVTARVTDA 292
Query: 601 -------VLPQGARTKP--WYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRG 651
L A P W LD+GCS HMT ++ + F++ G V GN+ +++G
Sbjct: 293 AALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKG 352
Query: 652 KGTIGNLN----SAKIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQASSNKLF 707
G + N + + +V+Y+ + NL+S+ L D G K I + + L
Sbjct: 353 IGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVL- 411
Query: 708 FSGSRRKNLYVLELNDMPAEFCFMSLEKDKW-IWHKRAGHISMKTIAKL---SQLDLVRG 763
+G + LY L+ + E + EKD+ +WH R GHI K + L LD
Sbjct: 412 -TGKKESTLYFLQGTTLAGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLD---- 466
Query: 764 LPKISFEKDKICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFAPVQTASLTGK-RYG 822
K + SF + ++ K L+ +H DL+ GK +Y
Sbjct: 467 ------------------KNIMISFGAAKHVTKDK-LDYVHSDLWGSTNVPFSIGKCQYF 507
Query: 823 FVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTF 882
+DDF+R TW+ F++ KDE+F F + +++N++ + + +D+G EF N F +F
Sbjct: 508 ITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSF 567
Query: 883 FDENGIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNR 942
+ G+ + +CA TPQQNGV ER NRT+ R ML+ES + FWAEA +T+ +++N+
Sbjct: 568 CRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINK 627
Query: 943 VSIRKVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTS 1002
+ P E W P FG YI +++ GK +P++ K IFLGY
Sbjct: 628 SPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSDQ---GKLNPRAKKGIFLGYPDGV 684
Query: 1003 KGYRVYNLKTQTVEISMHIIFDEYDEHSKPKEN----EDTEAPTLQNVPVQNTENTVEKE 1058
K ++V+ L+ + +S I+F E + + ++N ED + ++ ++ + + E
Sbjct: 685 KRFKVWLLEDRKCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDE 744
Query: 1059 DDQNVQDQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQ-------- 1110
+ D S Q + R + S D + L +D I
Sbjct: 745 NQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEED 804
Query: 1111 ----------------MEPKSINEAIID---DSWIEVMKEELSQFERNKVWNLVPNNQDK 1151
EP++ EA+ + W + EE+ ++N W+++ + K
Sbjct: 805 DSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGK 864
Query: 1152 TIIGTRWVFRNKLDEEG-KVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYA 1210
+IG +W+F+ K G + R KARLVA+G++Q+EGIDY E F+PV + +IR LL+
Sbjct: 865 RVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIV 924
Query: 1211 AHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWY 1270
++L Q+DVK+AFL+G L+E + +SQP G+ +++ V L K+LYGLKQ+PR W
Sbjct: 925 VQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWN 984
Query: 1271 DRLSTFLIENGFSRGKIDTTLFRKTHNTDLLI-VQVYVDDIIFGATKIKMCEEFSNLMQS 1329
R +F+I +G+ R K + ++ + N I + +YVDD++ + ++ +
Sbjct: 985 QRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNR 1044
Query: 1330 EFEMSMMGELGFFLGLQI-KQHSNGIF-ISQEKYIKDILKKYKMNEAKIMSTPMHPSSSL 1387
EFEM +G LG++I + GI +SQ +Y+ +L+ + M+++K+ TP+ L
Sbjct: 1045 EFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKL 1104
Query: 1388 DKDESGKSISEKEYRGM------IGSLLY-LTASRPDIVFAVGLCARFQTCAKESHLTAV 1440
+ EY + IGS++Y + SRPD+ + VG+ +RF + + H AV
Sbjct: 1105 RAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAV 1164
Query: 1441 KRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCR 1500
K + RY+ GT D L ++K F++ YCD+DYA D R+S +G G I W
Sbjct: 1165 KWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSG 1224
Query: 1501 KQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQH 1560
Q + LSTTEAEY++ A + +W+R + +V + CD+ SAI LSKN + H
Sbjct: 1225 LQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHH 1284
Query: 1561 SRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTK 1599
R+KHI++++HFIR+ + I + + T ADIFTK
Sbjct: 1285 ERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTK 1323
Score = 35.0 bits (79), Expect = 0.35
Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 48/180 (26%)
Query: 129 FEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSVWRPMVTAITQAKDL 188
++MSEN T++E F +++++ ++ D+ +L LP + + + K
Sbjct: 130 YKMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYCKT- 188
Query: 189 KSMNLEDLIGSLRAHEVVLQGDKPVKKVKTLALKASQQTPSVADEDVQEPQELEEVHEEE 248
+++LE++ ++R+ K L L AS +
Sbjct: 189 -TLHLEEITSAIRS--------------KILELGASGK---------------------- 211
Query: 249 AEDELALISKRIQRMMLR---RNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKNEC 305
L+ + ++ R++ R K P N S ++++ + TC+ C K GHFK +C
Sbjct: 212 ------LLKNNSDGLFVQDRGRSETRGKGPNKNKS-RSKSKGAGKTCWICGKEGHFKKQC 264
>At2g19840 copia-like retroelement pol polyprotein
Length = 1137
Score = 472 bits (1215), Expect = e-133
Identities = 280/822 (34%), Positives = 446/822 (54%), Gaps = 67/822 (8%)
Query: 827 DDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDEN 886
+D+SR WV FLK KDE+F +F + K V+ + + +R+D+G EF N F +
Sbjct: 319 NDWSRKVWVYFLKTKDEAFASFTEWKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKKE 378
Query: 887 GIKHNFSCARTPQQNGVVERKNRTLQEMARTMLNESNVENYFWAEAINTSCYILNRVSIR 946
GI + +C TPQQNGV ER NRT+ R+ML+ES ++ FWA+A +T+ Y++NR
Sbjct: 379 GIVRHRTCTYTPQQNGVAERLNRTIMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPSS 438
Query: 947 KVLNKTPYELWKNIKPSISYFHIFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYR 1006
+ NK P ELW + P+ S FGC Y+ + + GK DP++ K +F+GY KG+R
Sbjct: 439 SIENKIPEELWTSAVPNFSGLKRFGCVVYVYSQE---GKLDPRAKKGVFVGYPNGVKGFR 495
Query: 1007 VYNLKTQTVEISMHIIFDEYDEHSKPKENEDTEAPTLQNVPVQNTENTVE-----KEDDQ 1061
V+ ++ + IS +++F E D K N+ T + N + E KED+
Sbjct: 496 VWMIEEERCSISRNVVFRE-DVMYKDILNQSTSGMSFDFPLATNRIPSFECAGNRKEDEI 554
Query: 1062 NVQ--------DQSLQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDN------NMAM 1107
+VQ QS + P S G + + D + + D N +
Sbjct: 555 SVQGGVSDDDTKQSSEESPISTGSSGQNSGQRTYQIARDKPKRQTKIPDKLRDYELNEEV 614
Query: 1108 ISQM--------------EPKSINEAIIDDS---WIEVMKEELSQFERNKVWNLVPNNQD 1150
+ ++ EP +A+ D W++ + EE+ +N W LV +Q
Sbjct: 615 LDEIAGYAYMITEDGGNPEPNDYQKALQDSDYKMWLKAVDEEIESLLKNNTWVLVNRDQF 674
Query: 1151 KTIIGTRWVFRNKLDEEG-KVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAY 1209
+ IG +WVF+ K G + R KARLV +GY+Q+EGIDY E F+PV + +IR+LL+
Sbjct: 675 QKPIGCKWVFKRKSGIVGVEKPRFKARLVVKGYSQKEGIDYQEIFSPVVKHVSIRLLLSM 734
Query: 1210 AAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAW 1269
H ++L QMDVK+AFL+G+L+E +Y+ QP G+++K P+ V L ++LYGL+Q+PR W
Sbjct: 735 VTHCDMELQQMDVKTAFLHGYLDETIYIEQPEGYVHKRYPDKVCLLKRSLYGLRQSPRQW 794
Query: 1270 YDRLSTFLIENGFSRGKIDTTL-FRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQ 1328
+R + F+ + G+ R K D+ + F++ + + + + +YVDDI+ + + + L+
Sbjct: 795 NNRFNEFMQKIGYERSKYDSCVYFKELQSGEYIYLLLYVDDILIASRDKRTVCDLKALLN 854
Query: 1329 SEFEMSMMGELGFFLGLQI--KQHSNGIFISQEKYIKDILKKYKMNEAKIMSTPM----- 1381
SEFEM +G+ LG++I + + + ISQE Y+ +L + M++AK + TPM
Sbjct: 855 SEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLKVLGNFGMDQAKPVFTPMGAHFK 914
Query: 1382 -HPSSSLDKDESGKSISEKEYRGMIGSLLY-LTASRPDIVFAVGLCARFQTCAKESHLTA 1439
P++ + + + Y+ +GSL+Y + +RPD+ +VGL RF + + H A
Sbjct: 915 LKPATDEEVMRQSEVMRAVPYQSAVGSLMYSMIGTRPDLAHSVGLVCRFMSKPLKEHWQA 974
Query: 1440 VKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSC 1499
VK I RY+ G+ D L Y+ L YCD+DYA DK R+STSG
Sbjct: 975 VKWILRYIRGSIDRKLCYKNEGELILEGYCDSDYAADKEGRRSTSG-------------- 1020
Query: 1500 RKQNTIELSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQ 1559
+ LS+TEAEY++ + +W++ + + +V I+CD+ SAI L+KN +
Sbjct: 1021 --VKVVALSSTEAEYMALTDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVY 1078
Query: 1560 HSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPL 1601
H R+KHI++K+HFIRD V + + +DTE+ ADIFTK L
Sbjct: 1079 HERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKVL 1120
Score = 44.3 bits (103), Expect = 6e-04
Identities = 28/117 (23%), Positives = 50/117 (41%), Gaps = 5/117 (4%)
Query: 544 RSESSQKAEKAKKTCFYCNKSDH-KRQNVTF----RKDLLEELTLKDPTLHGYLKFLSCQ 598
R K+ + KK C+ C K H KRQ + + + E L + ++ +
Sbjct: 194 RGSDGPKSTEGKKVCWICGKEGHFKRQCYKWLEKNKANGAGETALVKDDAQDLVGLVASE 253
Query: 599 M*VLPQGARTKPWYLDSGCSRHMTGDRNCFLTFEKKDGGLVTFGNNDKGKIRGKGTI 655
+ + + W +D+GCS HMT + + F + G V NN +++G G +
Sbjct: 254 VNMSEGKDDQEEWIMDTGCSFHMTPRKEYLMDFVEAKSGKVRMANNSFSEVKGIGKV 310
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,532,367
Number of Sequences: 26719
Number of extensions: 1643102
Number of successful extensions: 7892
Number of sequences better than 10.0: 309
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 6677
Number of HSP's gapped (non-prelim): 869
length of query: 1608
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1495
effective length of database: 8,299,349
effective search space: 12407526755
effective search space used: 12407526755
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC139747.5