BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139747.4 + phase: 0 
         (500 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g10670 pseudogene                                                  176  3e-44
At3g31340 Athila ORF 1, putative                                      174  1e-43
At4g08050                                                             171  9e-43
At1g41690 hypothetical protein                                        167  2e-41
At4g07640 putative athila transposon protein                          162  3e-40
At3g30655 hypothetical protein, 3' partial                            160  1e-39
At1g37060 Athila retroelment ORF 1, putative                          160  1e-39
At2g07480 F9A16.15                                                    159  4e-39
At2g06160 putative Athila retroelement ORF1 protein                   157  2e-38
At3g30630 hypothetical protein                                        156  3e-38
At3g32890 Athila ORF 1, putative                                      155  6e-38
At3g32000 unknown protein                                             153  2e-37
At1g38440 hypothetical protein                                        147  2e-35
At4g07780 putative athila transposon protein                          144  1e-34
At2g13260 putative Athila retroelement ORF1 protein                   135  4e-32
At1g36130 hypothetical protein                                        134  9e-32
At2g06310 putative Athila retroelement ORF1 protein                   131  1e-30
At4g07620 putative athila transposon protein                          130  1e-30
At2g06110 putative Athila retroelement ORF1 protein                   117  1e-26
At4g07360                                                              96  5e-20

>At2g10670 pseudogene
          Length = 929

 Score =  176 bits (446), Expect = 3e-44
 Identities = 158/564 (28%), Positives = 249/564 (44%), Gaps = 100/564 (17%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           IV   V+ + F+IK  LI +VQ N+F G P EDP  H+    RL G  K N   ++  +L
Sbjct: 61  IVLRPVQNNNFKIKSGLIAMVQGNKFHGLPMEDPLDHLDELERLCGLTKINGVSEDGFKL 120

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L   SIT+W+  + AFL++FF +S+TA+LR++I+ FT K  ES
Sbjct: 121 RLFPFSLGDKAHLWEKTLPKNSITTWDDCKMAFLAKFFSNSRTARLRNEISGFTLKQNES 180

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPHHGF    +++T Y G+L   +M +D A+ G  + K     ++L
Sbjct: 181 FCEAWERFKGYQTKCPHHGFSQASLLNTLYRGVLPKIRMLLDTASNGNFLKKDIEEGWEL 240

Query: 199 IEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLT--V 254
           +E++AQ+  +Y     R I   +    K    M        L+ K+D ++Q   K    +
Sbjct: 241 VENLAQSGGNYNEDYGRSIYTSSNTDDKHHREM------KALNDKLDKIIQMQQKHVHFI 294

Query: 255 SVVTPALV----SPPCEFCGILDHTGVEC------------------KLGRVAKSPDQNS 292
           S   P  V    +  C     + + G                      LG V K   Q  
Sbjct: 295 SEDEPFQVQEGENDQCAEIRYVHNQGPSLPSAAAAAEPTKPFVPYNQSLGFVPKQQFQGG 354

Query: 293 YTFGQHTTPPVYANNER---VPQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSF---- 345
           Y   Q   PP +  +++    PQ S +  +L++    Q+    E+  +   +N+      
Sbjct: 355 YQ--QQQPPPGFTPHQQQAHAPQNSDIMTVLQQLIQGQATGAMEIAKKLSKVNNKVDRQG 412

Query: 346 VKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPK--SLINAIQLRDG 403
           V+L SK +S++   R +E     +A     ++P     PG+   NPK  S  +AI +   
Sbjct: 413 VELNSKFESMSTRMRYVE---GILASPSVNNNPC--QLPGKAIQNPKQYSTAHAITITHD 467

Query: 404 KQLEDTIMKTKTIEGEI--ESEKQQGEKVIGES--DKPI--------------------- 438
           ++L    + T   E  +  E E    + V+ ++  ++PI                     
Sbjct: 468 RELPTRYVPTSNTEDSVILEGEDFYQDDVLADNPIEEPILTSQPTRPQAPPATPFAKKTE 527

Query: 439 ---------VSPPYKLKIHVPQR-----------LAKPNFIVIESFSTPCVIESE----T 474
                    V PPYK  +  P R           L + +   I       +I  E    T
Sbjct: 528 AAKTKDIDFVPPPYKPLLPFPGRFKKVLVAKYRALLEKHIKDIPLVDCLALIHDEHKQLT 587

Query: 475 IEKAMCDLGENLRLMPLSLWERLG 498
               +CDLG ++ LMPLS+ ++LG
Sbjct: 588 FNNCLCDLGASVSLMPLSVVKKLG 611


>At3g31340 Athila ORF 1, putative
          Length = 781

 Score =  174 bits (441), Expect = 1e-43
 Identities = 154/554 (27%), Positives = 246/554 (43%), Gaps = 97/554 (17%)

Query: 4   KRALKEYAITSSDESYDAIVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFL 63
           ++ L+++   + D   D   +  +  + FEIK  L+ LV+QNQFF   +E+   H+  F 
Sbjct: 59  RQTLRDHDAPNIDFFRDRNQHLPINRNDFEIKTGLLALVKQNQFFVHSSENHVYHLDNFE 118

Query: 64  RLSGTLKAN---QEAVRLHLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSK 120
            +    + N    + ++  LF FSL D A  W  SL   ++ SW   + AFL Q+F  S+
Sbjct: 119 DICRITRMNGVPDDIIKCRLFIFSLADNAHRWLKSLDPINLRSWEDYKAAFLGQYFTQSR 178

Query: 121 TAQLRSQITQFTQKDGESLYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVD 180
           TA LR++I+ F Q   ES  +AWERFK   R CPHHGF    +I TFY G+  + KM +D
Sbjct: 179 TAILRNKISSFQQGGTESFPEAWERFKDYYRECPHHGFSRATLISTFYQGVDKAYKMALD 238

Query: 181 AAAGGALMNKTFTGAYDLIEDMAQNHYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLST 240
            A+ G  M KT T A  LI+++A ++     +               G  ++  L  LS 
Sbjct: 239 TASNGDFMTKTETEATKLIKNLAASNINHNVDY--------DRSNRGGGGELKQLAELSV 290

Query: 241 KVDTLLQKFDKLTVSVVTPALVSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTF----- 295
           KV+ LL++  K+       +      E+ G       +C     A+    N   +     
Sbjct: 291 KVEQLLRRDQKVINFCEDSSKGMVHQEYSG-------DCSEDLQAEMNFVNGIRYIQLRQ 343

Query: 296 ---GQHTTPPVYANNERVPQKSSLEILLE---KHAMEQSKQFQELKNQTGSLNDSFVKLT 349
               Q+ +P  +     +   S+L+ +LE   K+A + + +   + N    LN  F  L+
Sbjct: 344 AHKVQNFSPTDFRIKGTIRDNSNLQQILEGLKKNAADINVKVDSMYN---DLNVKFATLS 400

Query: 350 SKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINAIQLRDGKQLEDT 409
           S       H + LE Q+SQV   V+ S        G+ E  P+ +  A Q+     + +T
Sbjct: 401 S-------HVKTLENQVSQV---VSASMRPAGAHSGKEE--PREIDVAKQVETNAVVVET 448

Query: 410 IMKTKTIEGE----------------------------------IESEKQQGEKVIGE-- 433
           +++ K +E +                                  +ES++QQ E  + +  
Sbjct: 449 LVEDKIVEDDEPLSEEPPPYVPKLPFPGRERQIQSRKREEYALLVESQRQQKEAQLTDVV 508

Query: 434 ---SDKPIVS-----PPYKLKIHVPQRLAKPNFIVIESFSTPCVIESETIEKAMCDLGEN 485
              + K +VS     PP      +P++L  P      SF  PC I     E+ +CDLG  
Sbjct: 509 EVLAGKEMVSTCSAIPP----ATIPEKLGDPG-----SFVLPCRIGKSAFERCLCDLGAG 559

Query: 486 LRLMPLSLWERLGI 499
           + LMPLS+ +RLGI
Sbjct: 560 VNLMPLSMSKRLGI 573


>At4g08050
          Length = 1428

 Score =  171 bits (433), Expect = 9e-43
 Identities = 128/404 (31%), Positives = 194/404 (47%), Gaps = 47/404 (11%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           I  P ++ + FEIK  LI ++Q N+F G P EDP  H+  F RL    K N   ++  +L
Sbjct: 29  IAPPAIQNNNFEIKSGLISMIQGNKFHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFKL 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L   SIT+W+  +KAFLS+FF +++TA+LR++I  F+QK GES
Sbjct: 89  RLFPFSLGDKAHIWEKNLSHDSITTWDDYKKAFLSKFFSNARTARLRNEIYGFSQKTGES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPHH F    ++ T Y G+L   +M +D A+ G   NK     ++L
Sbjct: 149 FCEAWERFKGYTNQCPHHSFTKASLLSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGWEL 208

Query: 199 IEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLTVSV 256
           +E++AQ+  +Y    +R +        K          +  L+ K+D +L    K    +
Sbjct: 209 VENLAQSDGNYNEDCDRTVRGTADSDDKHR------KEIKALNDKLDRILLSQQKHVHFL 262

Query: 257 VTPAL-------------VSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPV 303
           V                 V  P +  G  +   V    G V K   Q +Y   Q   PP 
Sbjct: 263 VDDEQYQVQDGEGNQLEEVYLPQQKQG-QNKPFVLYNQGFVPKQQFQGNY---QPPPPPG 318

Query: 304 YANNER-------VPQKSSLEILLEKHA---MEQSKQFQELKNQTGSLNDSFVKLTSKVD 353
           +   +           K  ++ LL+  A   ME +K+  EL ++   L+ S+  L +KV+
Sbjct: 319 FVTQQNQCHAAPDAKMKQMVKQLLQGQASSSMEIAKKLSELHHK---LDCSYNDLNAKVE 375

Query: 354 SIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINA 397
           ++    R LE       Q  +T SP +   PG++  NPK    A
Sbjct: 376 ALNTKVRYLE------GQSASTFSPKVTRLPGKSIQNPKEYATA 413



 Score = 36.2 bits (82), Expect = 0.043
 Identities = 16/35 (45%), Positives = 21/35 (59%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSLWERL 497
           SF+ PC I        +CDLG ++ LMPLS+  RL
Sbjct: 576 SFTLPCSIGEFAFSDCLCDLGASVNLMPLSMARRL 610


>At1g41690 hypothetical protein
          Length = 371

 Score =  167 bits (422), Expect = 2e-41
 Identities = 94/231 (40%), Positives = 135/231 (57%), Gaps = 11/231 (4%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           IV P V+ + FEIK +LI +VQ N+F G P EDP  H+  F RL    K N   ++  +L
Sbjct: 29  IVPPPVQNNNFEIKSSLIAMVQGNKFHGLPMEDPLDHLDEFERLCSLTKINGVSEDGFKL 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L  GSIT+W+  +KAFL++FF +S+TA+LR++I+ FTQK  ES
Sbjct: 89  RLFPFSLGDKAHLWEKTLPQGSITTWDDCKKAFLAKFFSYSRTARLRNEISGFTQKQSES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPHHGF+   ++ T Y G+L   +M +D A+ G  + K     ++L
Sbjct: 149 FCEAWERFKGYQTKCPHHGFKQASLLSTLYRGVLPKIRMLLDTASNGNFLKKDVEEGWEL 208

Query: 199 IEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQ 247
           +E  AQ+  +Y    +R I   +    K    M        L+ K+D +LQ
Sbjct: 209 VEKFAQSDGNYNEDYDRSIRTSSDSDDKHRRDM------KALNDKLDKILQ 253


>At4g07640 putative athila transposon protein
          Length = 866

 Score =  162 bits (411), Expect = 3e-40
 Identities = 87/232 (37%), Positives = 133/232 (56%), Gaps = 11/232 (4%)

Query: 20  DAIVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAV 76
           + I  P ++ + FEIK  LI ++Q N+F+G P EDP  H+  F RL    K N    +  
Sbjct: 27  EGIAPPAIQNNNFEIKSGLISMIQGNKFYGLPMEDPLDHLDEFDRLCNLTKINGVSADGF 86

Query: 77  RLHLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDG 136
           +L LFPFSL D+A  W  +L   SI +W+  +KAFLS+FF +++TA+LR++I+ F+QK G
Sbjct: 87  KLRLFPFSLGDKAHIWEKNLPHDSIITWDDCKKAFLSKFFSNARTARLRNEISGFSQKTG 146

Query: 137 ESLYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAY 196
           ES  +AWERFK     CPHHGF    ++ T Y G+L   +M +D A+ G   NK     +
Sbjct: 147 ESFCEAWERFKGYTNQCPHHGFTKASMLSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGW 206

Query: 197 DLIEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLL 246
           +L++++AQ+  +Y    +R + D      K          +  L+ K+D +L
Sbjct: 207 ELVDNLAQSDGNYNEDCDRTVRDTADSDDKHR------KEIKALNDKLDRIL 252



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 449 VPQRLAKPNFIVIESFSTPCVIESETIEKAMCDLGENLRLMPLSLWERLG 498
           +P++L+ P      SF+ PC +      + +CDLG ++ LM LS+ +RLG
Sbjct: 531 IPKKLSDPG-----SFTLPCSLGPLAFNRCLCDLGASVSLMALSVAKRLG 575


>At3g30655 hypothetical protein, 3' partial
          Length = 660

 Score =  160 bits (406), Expect = 1e-39
 Identities = 81/184 (44%), Positives = 117/184 (63%), Gaps = 3/184 (1%)

Query: 25  PTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRLHLF 81
           P V+ + FEIK  LI +VQ N+F G P EDP  H+  F RL G  K N   ++  +L LF
Sbjct: 32  PPVQNNNFEIKSGLIAMVQGNKFHGLPMEDPLDHLDEFERLYGLTKINGVSEDGFKLRLF 91

Query: 82  PFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGESLYD 141
           PFSL D+A  W  +L   SIT+W+  +KAFL++FF +S+TA+LR++I+ FTQK  ES  +
Sbjct: 92  PFSLGDKAHLWEKTLPQNSITAWDDCKKAFLAKFFSNSRTARLRNEISGFTQKQNESFGE 151

Query: 142 AWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDLIED 201
           AWERFK     CPHHGF+   ++ T Y G+L   ++ +D A+ G  + K     ++L+E+
Sbjct: 152 AWERFKGYQTKCPHHGFKQASLLSTLYRGVLPKIRILLDTASNGNFLKKDVEEGWELVEN 211

Query: 202 MAQN 205
            AQ+
Sbjct: 212 FAQS 215



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 63/271 (23%), Positives = 101/271 (37%), Gaps = 91/271 (33%)

Query: 311 PQKSSLEILLEK-------HAMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLE 363
           PQ S + I+L++        AME +K+  E+ N+   ++   V+L +K +S++   R +E
Sbjct: 369 PQNSDIMIMLQQLIQGQATGAMEIAKKLCEVNNK---IDRQGVELNNKSESMSTRMRYVE 425

Query: 364 TQISQVAQKVATSSPTLEVFPGQTEANPK--SLINAIQLRDGKQL--------------- 406
                +A      +P     PG    NPK  + ++AI +   ++L               
Sbjct: 426 ---GILASPSVNKNPCQ--LPGNAIQNPKEYATVHAITITHDRELPTRYVPTSSTEDSVI 480

Query: 407 -------EDTIMKTKTIEGEI---ESEKQQGEKVIGESDKP---------IVSPPYKLKI 447
                  +D ++   TIE  I   +S + Q        +KP          V PPYK  +
Sbjct: 481 LHGEDFYQDDVLANNTIEEPILTSQSTRPQASPATHFVEKPEAAKTKDTVFVPPPYKPPL 540

Query: 448 HVPQRLAKP----------------------------------NFIVIE------SFSTP 467
             P R  K                                     IV E      SF+ P
Sbjct: 541 PFPGRFKKVLVAKYRALLEKQIKDMPLVAYLALIPDEHNAITRQKIVPEKLEDPGSFTLP 600

Query: 468 CVIESETIEKAMCDLGENLRLMPLSLWERLG 498
           C I   T    +CDLG ++ +MPLS+  +LG
Sbjct: 601 CSIRQLTFSNCLCDLGASVSIMPLSVARKLG 631


>At1g37060 Athila retroelment ORF 1, putative
          Length = 1734

 Score =  160 bits (406), Expect = 1e-39
 Identities = 139/485 (28%), Positives = 218/485 (44%), Gaps = 90/485 (18%)

Query: 20  DAIVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAV 76
           + IV P V+ + FEIK  LI +VQ N+F G P EDP  H+  F RL    K N   ++  
Sbjct: 27  NGIVPPPVQNNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGF 86

Query: 77  RLHLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDG 136
           +L LFPFSL D+A  W  SL  GSITSWN  +KAFL++FF +S+TA+LR+ I+ FTQ + 
Sbjct: 87  KLRLFPFSLGDKAHQWEKSLPQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNN 146

Query: 137 ESLYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAY 196
           E+ Y+AWERFK     CPHH                   +M +D A+ G  +NK     +
Sbjct: 147 ETFYEAWERFKGYQTQCPHH-------------------EMLLDTASNGNFLNKDVEDGW 187

Query: 197 DLIEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVS-TLDHLSTKV---------DT 244
           +++E++AQ+  +Y    +R I   +    K    M  ++  LD L             D 
Sbjct: 188 EVVENLAQSDGNYNEDYDRSIRTSSDSDEKHRREMKAMNDKLDKLLLMQQKHIHFLGDDE 247

Query: 245 LLQKFDKLTVSVVTPALVSPPCEFCGILDH------------TGVECKLGRVAKSPDQNS 292
            LQ  D  T+ +   + V     +    ++            T V  +  +V  S  QN 
Sbjct: 248 TLQVQDGETLQLEEVSYVQNQGGYNKGFNNFKQNHPNLSYRSTNVANRQDQVYPSQQQNQ 307

Query: 293 ------YTFG--------------QHTTPPVYANNERVPQ--------KSSLEILLEKH- 323
                 Y  G              Q   PP +   ++ P         K+ L+ +L+   
Sbjct: 308 PKPFVPYNQGQGYVPKQQYQGNYQQQLPPPGFTQQQQQPALTTPDSDLKNMLQQILQGQA 367

Query: 324 --AMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLE 381
             AM+ SK+  E+ N+   ++ S+  +  KV+++    R +E Q        +T++P   
Sbjct: 368 TGAMDLSKRMAEIHNK---VDCSYNDINIKVEALTSKIRYIEGQTG------STAAPKFT 418

Query: 382 VFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEK----QQGEKVIGESDKP 437
              G++ +N K   +AI LR GK+L       +  E  ++ +     Q G       ++P
Sbjct: 419 GPSGKSMSNSKEYAHAITLRSGKELPTKESPNQNTEDSLDQDGEDFCQNGNSAEKAIEEP 478

Query: 438 IVSPP 442
           I+  P
Sbjct: 479 ILHQP 483



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 449 VPQRLAKPNFIVIESFSTPCVIESETIEKAMCDLGENLRLMPLSLWERLG 498
           +P++L  P      SF+ PC +      K +CDLG ++ LMPL + ++LG
Sbjct: 592 IPKKLGDPG-----SFTLPCALGPLAFSKCLCDLGASVSLMPLPVAKKLG 636


>At2g07480 F9A16.15
          Length = 1012

 Score =  159 bits (401), Expect = 4e-39
 Identities = 134/503 (26%), Positives = 228/503 (44%), Gaps = 81/503 (16%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           IV P ++ + F+IK  LI ++Q N+F G P EDP  H+  F RL    K N   +E+ +L
Sbjct: 24  IVPPPIQNNNFKIKSDLISMIQGNKFHGLPMEDPLDHLDNFDRLCSLTKINGVSEESFKL 83

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L + SI +W+  +KAFL++FF +S+ A+LRS+I+ F QK+ ES
Sbjct: 84  RLFPFSLGDKAHLWEKTLPVKSIDTWDDCKKAFLAKFFSNSRKARLRSEISGFNQKNSES 143

Query: 139 LYDAWERFKKMLRLCPHHGF--ENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAY 196
             +AWERFK     CPHH      + I+       L   +M +D A+ G ++NK     +
Sbjct: 144 FSEAWERFKGYTTQCPHHESLPPQYSILR-----CLPKIRMLLDTASNGNILNKDVAEGW 198

Query: 197 DLIEDMAQNHYQWTSE-----RVIADVTPPPSKK---------EAGMYQVSTLDHLSTKV 242
           +L+E++AQ+H  +  +     R  +D      K+         +  + Q   + +++ + 
Sbjct: 199 ELVENLAQSHRNYNEDYDRTNRGSSDSEDKHKKEIKTLNDRIDKLVLAQQRNVYYITEEE 258

Query: 243 DTLLQKFDKLTVSVVTPAL-----------VSPPCEFCGILDHTGVECKLGRVAKSPDQ- 290
            T LQ  + LT+  V+                PP        H  +  +   VA   DQ 
Sbjct: 259 LTQLQDGENLTIEEVSYLQNQGGYNKGFNNYKPP--------HPNLSYRSNNVANPQDQV 310

Query: 291 -----------------NSYTFGQHTTPPVYANNERVPQKSSLEI------LLEKHAMEQ 327
                              Y   Q+  PP +    + P     E+      L++ HA   
Sbjct: 311 YPPQNQPTQAKPFVPYNQGYNQKQNFGPPGFTQQPQQPSAQDSEMKTLPQQLVQGHASCS 370

Query: 328 SKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPT-LEVFPGQ 386
               ++L   T  ++ S+  L  K+D++    + +E  I+      +TS+P  L   PG+
Sbjct: 371 MTMDKKLAELTTRIDCSYNDLNIKIDALNTRVKSMEGHIA------STSAPKHLGQLPGK 424

Query: 387 TEANPKSLINAIQLRDGKQLEDTIMKTKTI-------EGEIESEKQQGEKVIGESDKPIV 439
              NPK   +AI   +    ED+ ++   +       E E++   +  E+    S+   +
Sbjct: 425 AVQNPKEYAHAISTVNTSATEDSGIQEGEVLRPRSRQEIELDFFARLVERAHDPSNPIHI 484

Query: 440 SPPYKLKIHVPQRLAKPNFIVIE 462
             PY  K   P+R+A+ + ++ +
Sbjct: 485 PSPYVPKPAFPERIAQIDEMIFQ 507



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 8/83 (9%)

Query: 404 KQLEDTIMKTKTIEGEIESEKQQGEKVIGESDKPIVSPPYKLKIHVPQRLAKPNFIVIES 463
           K+LE+ +    T +  I    Q+ ++++  S +   S   + K+ +P++L  P      S
Sbjct: 518 KELEEKVPLVDTPKEMIMERPQEAQQIVELSFE--CSAIIQKKV-IPKKLGDPG-----S 569

Query: 464 FSTPCVIESETIEKAMCDLGENL 486
           F+ PC +       ++CDLG ++
Sbjct: 570 FTLPCSLAPLVFNNSLCDLGASM 592


>At2g06160 putative Athila retroelement ORF1 protein
          Length = 750

 Score =  157 bits (396), Expect = 2e-38
 Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 11/231 (4%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           IV P V+ + FEIK  LI +VQ N+F G P ED   H+  F RL    K N   ++  + 
Sbjct: 29  IVLPLVQNNNFEIKSGLIAMVQGNKFHGLPMEDSLDHLDEFERLCDLTKINGVSEDGFKF 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+   W  +L   SIT+W+  +KAF ++FF +S+TA+LR++I+ FTQK  ES
Sbjct: 89  RLFPFSLGDKTHLWEKTLPQNSITTWDDCKKAFFAKFFSNSRTARLRNEISGFTQKQNES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPH GF+   ++ T Y G+L   +M +D A+ G  +NK     ++L
Sbjct: 149 FCEAWERFKGYQTKCPHPGFKQASLLSTLYRGVLPKLRMLLDTASNGNFLNKDVEKGWEL 208

Query: 199 IEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQ 247
           +E++AQ+  +Y    ++ I+  +    K          +  L+ K+D LLQ
Sbjct: 209 VENLAQSDGNYNENYDKSISTSSESDDKHH------REIKALNDKIDKLLQ 253



 Score = 37.4 bits (85), Expect = 0.019
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSLWERL 497
           SF+ PC I   T    +CDLG ++ LMPLS+  +L
Sbjct: 610 SFTLPCSISQLTFSNCLCDLGASVSLMPLSVARKL 644


>At3g30630 hypothetical protein
          Length = 785

 Score =  156 bits (394), Expect = 3e-38
 Identities = 120/431 (27%), Positives = 202/431 (46%), Gaps = 53/431 (12%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           I  PT++ + F+IK  LI ++Q N+F G P ED   H+  F RL    K N   ++  +L
Sbjct: 29  IAPPTIQNNNFKIKSGLISMIQGNKFHGLPMEDLLDHLDEFDRLCNLTKVNGVSEDGFKL 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPF L D+A  W  ++   SI +W   +KAFL++FF ++KTA+L ++I+ F+QK GES
Sbjct: 89  RLFPFFLGDKAHIWEKNMPHDSIITWVDCKKAFLAKFFSNAKTARLINEISSFSQKTGES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPHHGF+   ++ T Y G+L   +M +D A+     NK     ++L
Sbjct: 149 FCEAWERFKGYTNQCPHHGFKKASLLSTLYRGVLPRIRMLLDTASNENFQNKDVEEGWEL 208

Query: 199 IEDMAQ--NHYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLTV-- 254
           IE++AQ  ++Y    ER I   T    K      ++  L+    K+    QK     V  
Sbjct: 209 IENLAQSNDNYNKDCERTIRGTTDSDDKHRK---EIKALNDKQDKILLSQQKHVHFLVDD 265

Query: 255 -----------SVVTPALVSPPCEFCGI----LDHTGVECKLGRVAKSPDQ--------- 290
                       +   + ++    + G      ++  +  +   +A   DQ         
Sbjct: 266 EQYQVQDGEGNQLEEVSYINNQSGYKGYNNFKTNNPNLSYRSTNIANPQDQVYPPQRQQA 325

Query: 291 --NSYTFGQHTTPPVYANNERVPQKSSLEILLEKHAMEQSKQFQELKNQTGSLNDSFVKL 348
              +Y   Q   PP +A     PQ+       + +  + ++Q  + +  + S++  +  L
Sbjct: 326 ISGNY---QQQPPPRFA-----PQQHQGPPAPDANMKQMAQQLLQ-EQASSSMDCRYNDL 376

Query: 349 TSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPK--SLINAIQLRDGKQL 406
            +KV+++    R LE       Q  +TS+P +   PG+   N K  + +NAI +   ++L
Sbjct: 377 NAKVEALNTKVRYLE------GQSASTSAPKVTGLPGKPIQNQKEYATVNAITICHDREL 430

Query: 407 EDTIMKTKTIE 417
               +K   +E
Sbjct: 431 PTRHVKVSVVE 441



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 18/31 (57%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSL 493
           S + PC I        +CDLG ++ LMPLS+
Sbjct: 563 SCTLPCSIGELAFSNCLCDLGASVSLMPLSV 593


>At3g32890 Athila ORF 1, putative
          Length = 755

 Score =  155 bits (391), Expect = 6e-38
 Identities = 119/399 (29%), Positives = 190/399 (46%), Gaps = 57/399 (14%)

Query: 41  LVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRLHLFPFSLRDRASAWFHSLQ 97
           ++Q N+F G P EDP  H+  F RL    K N   ++  +L LFPFSL D+A  W  +L 
Sbjct: 1   MIQGNKFHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLP 60

Query: 98  IGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGESLYDAWERFKKMLRLCPHHG 157
             SIT+W+  +KAFLS+FF +++TA+LR++I+ F+QK  ES  +AWERFK     CPHHG
Sbjct: 61  HDSITTWDDCKKAFLSKFFSNARTARLRNEISGFSQKTRESFCEAWERFKGYTNQCPHHG 120

Query: 158 FENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDLIEDMAQNHYQWTSERVIAD 217
           F    ++ T Y G+L   +M +D ++ G   NK     ++L+E++AQ+   +  +    +
Sbjct: 121 FTKASLLSTLYRGVLLRIRMLLDTSSNGNFQNKDVEEGWELVENLAQSDGNYNEDCDRNE 180

Query: 218 VTPPPSKKEAGMYQVSTLDHLSTKVD-----------TLLQ------------------K 248
           +     K +  M  +S   H+   VD             L+                  K
Sbjct: 181 IKALNDKLD--MILLSQQKHVHFLVDDKQFQVQYGEGNQLEEVSYIINNQGGYKGYNNFK 238

Query: 249 FDKLTVSVVTPALVSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPVYANNE 308
            +   +S  +  + +PP +  G  +   V    G V K   Q +Y   Q   PP +   +
Sbjct: 239 TNNPNLSYRSTNVANPPQQQQG-QNKPFVPYNQGFVPKQQFQGNY---QPPPPPGFTTQQ 294

Query: 309 R-------VPQKSSLEILLEKHA---MEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIH 358
                      K  ++ LLE  A   ME +K+  EL ++   L+ S+  + +KV+++   
Sbjct: 295 NQGPAAPDAEMKQMVQQLLEVQASSSMEIAKKLSELHHK---LDCSYNDMNAKVEALNTK 351

Query: 359 TRMLETQISQVAQKVATSSPTLEVFPGQTEANPKSLINA 397
            R LE       Q  +TS+P +   PG++  NPK    A
Sbjct: 352 VRYLE------GQSASTSTPKVTGLPGKSIQNPKEYATA 384



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 16/35 (45%), Positives = 21/35 (59%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSLWERL 497
           SF+ PC I        +CDLG ++ LMPLS+  RL
Sbjct: 528 SFTLPCSIGELAFSDCLCDLGASVSLMPLSVARRL 562


>At3g32000 unknown protein
          Length = 839

 Score =  153 bits (386), Expect = 2e-37
 Identities = 86/230 (37%), Positives = 129/230 (55%), Gaps = 11/230 (4%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           I  P ++ + FEIK  LI ++Q N+F G P EDP  H+  F RL    K N   +   +L
Sbjct: 29  IAPPAIQKNNFEIKSGLISMIQGNKFHGLPMEDPLDHLDEFDRLCNLTKINGVSENGFKL 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L   SIT+ +  +KAFLS+FF + +TA+LR++I+ F+QK GES
Sbjct: 89  RLFPFSLGDKALIWEMNLPHDSITTRDDCKKAFLSKFFSNDRTARLRNEISGFSQKIGES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK     CPHHGF    ++ T Y G+L   +M +D A+ G   NK     ++L
Sbjct: 149 FCEAWERFKDYTNQCPHHGFTKASLLSTLYRGVLPRIRMLLDTASNGNFQNKDVEEGWEL 208

Query: 199 IEDMAQN--HYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLL 246
           ++++AQ+  +Y    +R +        K          +  L+ K+D +L
Sbjct: 209 VDNLAQSDGNYNEDCDRTVRGTADSDDKHR------KEIKALNDKLDRIL 252



 Score = 33.1 bits (74), Expect = 0.37
 Identities = 16/35 (45%), Positives = 19/35 (53%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSLWERL 497
           SFS PC I        +CDLG  + LMP S+  RL
Sbjct: 580 SFSLPCSIGEFAFSDCLCDLGAFVSLMPCSVARRL 614


>At1g38440 hypothetical protein
          Length = 263

 Score =  147 bits (370), Expect = 2e-35
 Identities = 73/175 (41%), Positives = 110/175 (62%), Gaps = 3/175 (1%)

Query: 41  LVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRLHLFPFSLRDRASAWFHSLQ 97
           ++Q+N+F G P EDP  H+  F RL    K N   ++  +L LFPFSL D+A  W  +L 
Sbjct: 1   MIQENKFHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLP 60

Query: 98  IGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGESLYDAWERFKKMLRLCPHHG 157
             SIT+W+  +KAFLS+FF +++TA+LR++I+ F+QK  ES  +AWERFK     CPHHG
Sbjct: 61  HDSITTWDDCKKAFLSKFFSNARTARLRNEISGFSQKTSESFCEAWERFKGYTNQCPHHG 120

Query: 158 FENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDLIEDMAQNHYQWTSE 212
           F    ++ T Y G+L    M +DAA+ G   NK     ++L+E++AQ++  +  +
Sbjct: 121 FTKASLLSTLYRGVLPCIIMLLDAASNGNFQNKDVEEGWELVENLAQSYGNYNED 175


>At4g07780 putative athila transposon protein
          Length = 446

 Score =  144 bits (362), Expect = 1e-34
 Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 8/199 (4%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           IV P V+ + FEI   LI ++Q N+F G P EDP  ++  F RL G  K N   ++  +L
Sbjct: 37  IVPPPVQINNFEIMSGLISMIQGNKFHGLPKEDPLDNLDSFDRLCGLTKINGVTKDMFKL 96

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL D+A  W  +L   SITSW+  +K FL++FF +++TA+LR++I+ FTQK+ E+
Sbjct: 97  RLFPFSLGDKAHHWKKTLPPDSITSWDDCKKDFLAKFFSNARTARLRNEISGFTQKNNET 156

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYD- 197
            ++A ERFK     CPHHGF+   ++ T Y G L   +M +D  + G  +N      ++ 
Sbjct: 157 FFEASERFKSYTTYCPHHGFKKASLLRTLYRGALPKIRMLLDTTSNGNFLNNDVAEGWER 216

Query: 198 ----LIEDMAQNHYQWTSE 212
                I+  A   + WT E
Sbjct: 217 GDSTQIDAPATQQFIWTIE 235



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 30/96 (31%), Positives = 49/96 (50%), Gaps = 11/96 (11%)

Query: 409 TIMKTKTIEGEIESEKQQGEKVIGESDKPIVS-----PPYKLKIHVPQRLAKPNFIVIES 463
           TI  T  +      +K + EK+  + ++ ++S       YK K  + ++L  P      S
Sbjct: 233 TIEHTPLLNTHHSRKKFKIEKLKKDQNQEMISRVSTQETYKKKF-IQEKLDDPG-----S 286

Query: 464 FSTPCVIESETIEKAMCDLGENLRLMPLSLWERLGI 499
           F+ PC +   T  + +CDLG ++ LMPLS  +RLGI
Sbjct: 287 FTLPCSLGPLTFNRCLCDLGASVSLMPLSTAKRLGI 322


>At2g13260 putative Athila retroelement ORF1 protein
          Length = 622

 Score =  135 bits (341), Expect = 4e-32
 Identities = 71/148 (47%), Positives = 96/148 (63%), Gaps = 3/148 (2%)

Query: 20  DAIVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAV 76
           + I  P VE + FEIK +LI +VQ ++F G   EDP  H+  F  L  T+K N   ++A 
Sbjct: 45  NGIQAPPVENNNFEIKSSLINMVQTSKFHGLSMEDPLDHLEQFDMLCSTVKINGISEDAF 104

Query: 77  RLHLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDG 136
           +L LFPFSL DRA  W  +L   SITSW+Q ++AFLS+FF  ++TA+LR++I+ FTQ+  
Sbjct: 105 KLRLFPFSLGDRARIWEKNLPQRSITSWDQCKRAFLSKFFSTTRTARLRNEISSFTQRSN 164

Query: 137 ESLYDAWERFKKMLRLCPHHGFENWLII 164
           ES  +AWERFK     CPHHGF    I+
Sbjct: 165 ESFCEAWERFKGYKMQCPHHGFSKESIL 192



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 13/104 (12%)

Query: 333 ELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVFPGQTEANPK 392
           ++K     +++ + +L +K++ + +H           +   +TS   +   PG++E N K
Sbjct: 221 QMKGMHTKVDNIYGELNAKIERLNVHV---------YSPSSSTSKHPMGTLPGKSETNHK 271

Query: 393 SLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQGEKVIGESDK 436
              NAI + D   +E+        +G I+    + EK I E  K
Sbjct: 272 EFCNAIFINDFDVVENMSYTQSREDGRID----ENEKAIEEISK 311


>At1g36130 hypothetical protein
          Length = 914

 Score =  134 bits (338), Expect = 9e-32
 Identities = 116/415 (27%), Positives = 190/415 (44%), Gaps = 56/415 (13%)

Query: 21  AIVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVR 77
           AIV P ++ + +E+KP    LV Q+ F G   E P  H+  F  L  ++KAN   ++ + 
Sbjct: 90  AIVPPPLQRNDYELKPGYFALVGQHPFHGLSHEQPMDHIERFEDLVLSIKANGVSEDYLL 149

Query: 78  LHLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGE 137
             LFP+SL   A +W   L+ GS+ +W  ++ AFL+ F+  +K+ +LR++++ FTQ   E
Sbjct: 150 CKLFPYSLAGEADSWLKQLKAGSLKTWRSIKIAFLNNFYDDAKSEELRNKLSTFTQGPAE 209

Query: 138 SLYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYD 197
           +   AW RFK+  R CPHHGF                ++M +DAA+ G         A  
Sbjct: 210 AFKAAWVRFKEYQRDCPHHGF----------------SEMALDAASNGNFNTHYPADATT 253

Query: 198 LIEDMAQNHYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTL--LQKFDKLTVS 255
           LIE++A       +    AD      KK AG    + +  ++ K+D++  L    K    
Sbjct: 254 LIENLA-----CINSTKNADF---ERKKIAGAISGNQMAEVNAKMDSVHNLLTGKKHVHF 305

Query: 256 VVTPALVSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPVYANNERVPQKSS 315
                 + P  E        GV   +GR     D  S      T+        RVP  ++
Sbjct: 306 AAEEETIEPEPE-----SEEGVFYIVGR-----DTGSLGSHMATSVATGLQGTRVP-PTT 354

Query: 316 LEILLEKHAMEQS--KQFQELKNQT-------GSLNDSFVKLTSKVDSIAIHTRMLETQI 366
           L+ LL +    ++  +    L++QT       G  +  +  L  K+D+++ H + L+ Q+
Sbjct: 355 LQSLLSRRLFLRAAFRGTMILESQTKLVVEFNGKFDGVYTNLNGKIDNLSSHLKKLDVQV 414

Query: 367 SQVAQKVATSSPTLEVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIE 421
           +Q AQ +      L    G  +ANP+   NAI +R+G    D + +    E E+E
Sbjct: 415 AQTAQSIKRQEGFL---LGNPDANPRKSCNAILIREG----DDVWEELDTEDELE 462



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 463 SFSTPCVIESETIEKAMCDLGENLRLMPLSLWERLGI 499
           SF   C I +    +++CDLG ++ LMP S+ ERLG+
Sbjct: 598 SFVLDCSISTSRFSRSLCDLGSSINLMPKSVAERLGM 634


>At2g06310 putative Athila retroelement ORF1 protein
          Length = 733

 Score =  131 bits (329), Expect = 1e-30
 Identities = 137/476 (28%), Positives = 204/476 (42%), Gaps = 91/476 (19%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRL 78
           I  P ++ + FEIK  LI ++Q N+F G P EDP  H+  F RL    K N   ++   L
Sbjct: 29  IAPPVIQNNNFEIKSGLISMIQGNKFHGLPMEDPLNHLDEFDRLCNLTKINGVIEDGFNL 88

Query: 79  HLFPFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGES 138
            LFPFSL  +A  W  +L   SIT+W+  +KAFLS+FF +++TA+LR++I+ F QK GES
Sbjct: 89  RLFPFSLGGKAHIWEKNLPHDSITTWDDCKKAFLSKFFSNARTARLRNEISGFLQKAGES 148

Query: 139 LYDAWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDL 198
             +AWERFK         G  N     T  +      K   +  A    +++       L
Sbjct: 149 FCEAWERFK--------DGNYNEDCDRTVRSTADSDDKHRKEIKALNDKLDRI------L 194

Query: 199 IEDMAQNHYQWTSERV-IADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLTVSVV 257
           +      H+    E+  + D      KK A     ST   ++TK  T        T    
Sbjct: 195 LSQQKHVHFLVDDEKYQVQDGRVTSWKKSA----TSTTTRVATKGIT--------TSKPT 242

Query: 258 TPALVSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPVYANNE-------RV 310
           TP   SP          T +  K+  +  + ++ +Y   Q   PP +A  +         
Sbjct: 243 TP--TSPTAA------QTLLIVKIKCILHNNNKGNY---QPQPPPGFAPQQNQGPATPEA 291

Query: 311 PQKSSLEILLEKHA---MEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQIS 367
             K  ++ LL   A   ME +K+  +L N+   L+ S+  L  KV+++    R LE    
Sbjct: 292 DMKQMVQQLLHGQASGSMELAKKISKLHNK---LHCSYNDLNVKVETLNTKVRYLE---- 344

Query: 368 QVAQKVATSSPT-LEVFPGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIESEKQQ 426
                 ++S+P  + + PG+   NPK   +AI LR GK LE T    KT+    +SE Q 
Sbjct: 345 --GHSASSSAPNQISLLPGKAIQNPKEYAHAISLRSGKALE-TREDPKTVTD--DSEDQD 399

Query: 427 G---------------------------EKVIGESDKPIVSPPYKLKIHVPQRLAK 455
           G                              +   +K  V PPYK ++  P R  K
Sbjct: 400 GPLELPLDHFTRPTTRATSPATSPTAPKPVAVKNKEKVFVPPPYKPQLPFPGRHKK 455


>At4g07620 putative athila transposon protein
          Length = 683

 Score =  130 bits (328), Expect = 1e-30
 Identities = 105/387 (27%), Positives = 167/387 (43%), Gaps = 58/387 (14%)

Query: 22  IVYPTVEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKANQEAVRLHLF 81
           IV P V+ + FEIK  LI  +Q N+F G P EDP  H+  F RL G  K N         
Sbjct: 37  IVPPPVQNNNFEIKSGLISKIQGNKFHGLPMEDPLDHLDSFDRLCGLTKIND-------- 88

Query: 82  PFSLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGESLYD 141
                              I SW+  +K FL++FF + +TA+LR++I+ F QK+ E+  +
Sbjct: 89  ------------------FINSWDDCKKVFLAKFFSNVRTARLRNEISGFNQKNNETFCE 130

Query: 142 AWERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDLIED 201
           AWERFK     CPHHGF+   ++ T Y G L   +M +D  + G  +NK     ++L+E+
Sbjct: 131 AWERFKSYTTQCPHHGFKKASLLSTLYRGALPKIRMLLDTPSNGNFLNKDVEEGWELVEN 190

Query: 202 MAQNH--YQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLTVSVVTP 259
           +AQ+   Y    +R +        K+      +  L+  ST V     K           
Sbjct: 191 LAQSDGCYNEDYDRSVRGTGGSEDKQSK---DIKALNEKSTNVANPQDK----------- 236

Query: 260 ALVSPPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPVYANNER---VPQKSSL 316
             V PP +         V+   G V K      Y   Q  +PP +    +     Q   +
Sbjct: 237 --VYPPQQ---NQSKPFVQYNQGYVPKQQFNGGYQ--QQNSPPGFTQQPQPALAAQDPDI 289

Query: 317 EILLEKHAMEQSKQFQELKNQTGSLNDSFVKLTSKVD----SIAIHTRMLETQISQVAQK 372
           + L+++    Q+ +      +   L++   +L +K+D     + +      ++I  V  +
Sbjct: 290 KQLIQQIIQGQATRAMAFDKKIAELHNKIAELHNKIDWSYNDLNVKFEAQNSKIKYVENQ 349

Query: 373 VA-TSSPT-LEVFPGQTEANPKSLINA 397
            A TS+P   +  PG+   NPK    A
Sbjct: 350 FASTSAPKHPQQLPGKAVQNPKDYATA 376


>At2g06110 putative Athila retroelement ORF1 protein
          Length = 616

 Score =  117 bits (293), Expect = 1e-26
 Identities = 101/398 (25%), Positives = 168/398 (41%), Gaps = 51/398 (12%)

Query: 27  VEGSKFEIKPALIYLVQQNQFFGSPTEDPNLHVSIFLRLSGTLKAN---QEAVRLHLFPF 83
           +  + +E+KP    LV Q+ F G   E P  H+  F  L  ++KAN   Q+ +   LFP+
Sbjct: 117 LRSNDYELKPGYFALVGQHPFHGLSYEQPMDHIERFEDLVLSIKANGVSQDYLLCKLFPY 176

Query: 84  SLRDRASAWFHSLQIGSITSWNQMRKAFLSQFFPHSKTAQLRSQITQFTQKDGESLYDAW 143
           SL   A++    L+ GS+ +W  ++ AFL+  +   K+ +LR++++ FTQ   E+L  AW
Sbjct: 177 SLVGEAASLLKQLKAGSLKTWRSIKIAFLNNLYDDVKSEELRNKLSTFTQGPAEALKAAW 236

Query: 144 ERFKKMLRLCPHHGFENWLIIHTFYNGLLFSTKMNVDAAAGGALMNKTFTGAYDLIEDMA 203
            RFK+  ++CPHHGF   +                V A     L  +     +  I    
Sbjct: 237 VRFKEYQQVCPHHGFSERI-------------SFVVTAPRMLTLRGRRLLELFQAIRWQR 283

Query: 204 QNHYQWTSERVIADVTPPPSKKEAGMYQVSTLDHLSTKVDTLLQKFDKLTVSVVTPALVS 263
           + H  +  E    +   P ++ E G + +   D+            ++ T +       +
Sbjct: 284 KKHVHFAVE---DESIEPETESEEGFFYIDGQDYKKFGQPQGNFSGNRFTGN----QSYT 336

Query: 264 PPCEFCGILDHTGVECKLGRVAKSPDQNSYTFGQHTTPPVYANNERVPQKSSLEILLEKH 323
           P   F     H+  E   G  A           Q   PP          +S ++ +LEK 
Sbjct: 337 PKPAFQKSFPHSNFERTYGNSAY----------QAPLPP--------SSESIMQSMLEKI 378

Query: 324 AMEQSKQFQELKNQTGSLNDSFVKLTSKVDSIAIHTRMLETQISQVAQKVATSSPTLEVF 383
              Q+K   E     G  +  +  L  K+D+++ H + L+ Q++Q  Q +      L V 
Sbjct: 379 LESQTKLVVEF---NGKFDAVYTDLNGKIDNLSSHLKKLDVQVAQTTQSIKRQEGFLPVN 435

Query: 384 PGQTEANPKSLINAIQLRDGKQLEDTIMKTKTIEGEIE 421
           P   +ANP    NAI +R+G    D + K   I  E+E
Sbjct: 436 P---DANPTKSCNAILIREG----DDVWKELDIGDELE 466


>At4g07360
          Length = 675

 Score = 95.9 bits (237), Expect = 5e-20
 Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 3/98 (3%)

Query: 53  EDPNLHVSIFLRLSGTLKAN---QEAVRLHLFPFSLRDRASAWFHSLQIGSITSWNQMRK 109
           EDP  H+  F RL    K N   ++  +L LFPFSL D+A  W  +L   SIT+W+  +K
Sbjct: 2   EDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLLHDSITTWDDCKK 61

Query: 110 AFLSQFFPHSKTAQLRSQITQFTQKDGESLYDAWERFK 147
           AFLS+FF +++TA+LR++I+ F+QK GESL +AWERFK
Sbjct: 62  AFLSKFFSNARTARLRNEISGFSQKTGESLCEAWERFK 99



 Score = 28.5 bits (62), Expect = 9.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query: 474 TIEKAMCDLGENLRLMPLSLWERL 497
           T    +CDLG ++ LMPLS+  RL
Sbjct: 427 TFSDCLCDLGASVSLMPLSVARRL 450


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,123,719
Number of Sequences: 26719
Number of extensions: 458803
Number of successful extensions: 1583
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1431
Number of HSP's gapped (non-prelim): 150
length of query: 500
length of database: 11,318,596
effective HSP length: 103
effective length of query: 397
effective length of database: 8,566,539
effective search space: 3400915983
effective search space used: 3400915983
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)