BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139745.5 + phase: 0 /pseudo
(2129 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20390 hypothetical protein 762 0.0
At3g31530 hypothetical protein 460 e-129
At2g15410 putative retroelement pol polyprotein 399 e-111
At2g13330 F14O4.9 380 e-105
At2g14400 putative retroelement pol polyprotein 324 3e-88
At2g15100 putative retroelement pol polyprotein 309 1e-83
At2g14380 putative retroelement pol polyprotein 295 2e-79
At1g37200 hypothetical protein 287 5e-77
At4g03800 274 5e-73
At1g37060 Athila retroelment ORF 1, putative 266 7e-71
At2g10780 pseudogene 266 1e-70
At4g10580 putative reverse-transcriptase -like protein 263 1e-69
At2g04670 putative retroelement pol polyprotein 258 2e-68
At3g11970 hypothetical protein 251 3e-66
At1g36590 hypothetical protein 251 3e-66
At2g07660 putative retroelement pol polyprotein 250 5e-66
At2g14650 putative retroelement pol polyprotein 249 9e-66
At1g35370 hypothetical protein 241 3e-63
At2g14040 putative retroelement pol polyprotein 234 5e-61
At2g10690 putative retroelement pol polyprotein 204 4e-52
>At1g20390 hypothetical protein
Length = 1791
Score = 762 bits (1967), Expect = 0.0
Identities = 431/1117 (38%), Positives = 633/1117 (56%), Gaps = 49/1117 (4%)
Query: 1024 ELINIGTEENKQEIKIGATLEEGVKQKVIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1083
E++NI + + + +GA + ++ ++I LL+ FAWS EDM G+DP I H +
Sbjct: 712 EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 771
Query: 1084 KPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1143
P PV+QK R+ P+ A + EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 772 DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 831
Query: 1144 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1203
VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M +D+EKTSF+T
Sbjct: 832 VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 891
Query: 1204 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKM 1263
GT+CYKVM FGL NAGATYQR + + D I + VEVY+DDM+VKS E HVE+L+K
Sbjct: 892 RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 951
Query: 1264 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGF 1323
F+ L Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+ ++V+
Sbjct: 952 FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1011
Query: 1324 LGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEG 1383
GR+ ++RFIS T C P + LL++ W+ + +EAF+ +K+YL PPILV P G
Sbjct: 1012 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1071
Query: 1384 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1443
L +Y+AV D ++ VL ++D ++ I+Y SK + ETRY ++EK A+ +A+
Sbjct: 1072 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1129
Query: 1444 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1503
+LR Y +HT +++ P++ + +G++ +W + LSEYDI F+ + A+K +LAD
Sbjct: 1130 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1188
Query: 1504 HLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGI 1563
L PL + EE W L DG+ +A G GI
Sbjct: 1189 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1225
Query: 1564 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1623
G +VSP + + R+ F TNN+AEYE I G+ A M+I + + DS L+ Q+
Sbjct: 1226 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1285
Query: 1624 KGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV- 1682
GE+E + + Y + + F +L IPR +N ADALA L+ + +D+
Sbjct: 1286 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLR 1341
Query: 1683 PIIRVQRLERPS-----HVFAIGDVIDQAGENVIDYRPWYYDIKQFLLSREYPPGASKQD 1737
II V+ +++PS V + + + D W +I+ +L G D
Sbjct: 1342 RIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYL-----SDGTLPSD 1396
Query: 1738 KKTLRRL---AGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTM 1794
K T RRL A ++ L + L K + +L C+ E ++M + H+G G H+ G +
Sbjct: 1397 KWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRAL 1456
Query: 1795 SRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIG 1854
+ KL + G+YW M DC + KC +CQ +A IH P L +P+PF W +D++G
Sbjct: 1457 ALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVG 1516
Query: 1855 RIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNG 1914
+ AS RFILV DYFTKWVEA SY + V F+ IICR+G+P +IITDNG
Sbjct: 1517 PM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNG 1574
Query: 1915 TNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLP 1973
+ + + C +KI + S+P PQ NG EA NK I ++K + K W + L
Sbjct: 1575 SQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELD 1634
Query: 1974 YALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLN 2033
L YRTT RS+T TPF+ YGMEA+ P EV SLR M K E + D+L+
Sbjct: 1635 GVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLD 1693
Query: 2034 LIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRKISQQPD-PRGKWTPNYE 2092
+EE R A+ R Q+YQ +++KVH R F VG+LVL++ + GK N+E
Sbjct: 1694 DLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWE 1753
Query: 2093 GPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2129
G Y V K G L M G +P N+ +K+Y+
Sbjct: 1754 GSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1790
>At3g31530 hypothetical protein
Length = 831
Score = 460 bits (1183), Expect = e-129
Identities = 283/865 (32%), Positives = 445/865 (50%), Gaps = 120/865 (13%)
Query: 1177 SFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIH 1236
S+ ++ + + M+PED+EKT+F T G FCY+VMPFGL NAGATY+R + +F I
Sbjct: 83 SYCHSWTLFVVMMMNPEDQEKTAFYTEQGIFCYRVMPFGLKNAGATYERFVNKIFALQIG 142
Query: 1237 KEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQK 1296
K +EVY+DDM+VKS E+ H+ +L + F++L Y ++LNP KC FGVRS
Sbjct: 143 KTMEVYIDDMLVKSMTEKDHISHLRECFKQLNLYNVKLNPAKCRFGVRS----------- 191
Query: 1297 GIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVW 1356
GIE +P ++ A+ M +PQ +++V+ GR+ ++RFIS T C + +LR+N+ W
Sbjct: 192 GIEANPKQIEALLGMASPQNKREVQCLTGRVAALNRFISRSTEKCLAFYDVLRRNKKFEW 251
Query: 1357 NDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYY 1416
C+EAF +K YL PPIL PV G P +Y+AV D ++ L ++D +K I+Y
Sbjct: 252 TTRCEEAFQELKKYLATPPILAKPVIGEPQYLYVAVSDTAVSGELVREDRGEQK--LIFY 309
Query: 1417 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1476
+S+ FT E+RY +EK A+ +A++LR Y +H+ ++ M P++ I + +G++
Sbjct: 310 VSQTFTSAESRYPQMEKLALAVVMSAQKLRPYFQSHSIIVMGSM-PLRVILHSPSQSGRL 368
Query: 1477 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEP 1536
A+W + LSEYDI ++ + K +LAD + P + + E P
Sbjct: 369 AKWTIELSEYDIEYQNKTCAKSQVLADFIVELPTKEAR-------------------ENP 409
Query: 1537 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1596
L ++ W L DG+ + G G+G + SP G E TNN+AEYEA +
Sbjct: 410 L-------DTTWLLHVDGSSSKQGSGVGIRLTSPTG-----------EATNNVAEYEALV 451
Query: 1597 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHI 1656
G+ A ++I + DS L+ NQ GE+ T + Y + + L F + EL I
Sbjct: 452 AGLNLAWGLKIGKTRAFCDSQLIANQFNGEYTTQDKKMEAYLIHVQNLAKNFDEFELTRI 511
Query: 1657 PRDENQMADALATLSSMFRVNHWNDVPIIRVQR----LERPSHVFAIGDVIDQAGENVID 1712
PR EN ADALA L+S + +P+ +++ L + HV I DQ + +
Sbjct: 512 PRGENTSADALAALASTSDTSLKRVIPVEFIEKPSIELGKEEHVLPIQISADQDDPDDCN 571
Query: 1713 YRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHE 1772
W I ++ + P + K + L+ A RF+L LYK L+ CV+
Sbjct: 572 -SEWMEPIISYISEGKLP--SDKWKARKLKAQAARFVLVDTKLYKWRLSGPLMTCVEAEA 628
Query: 1773 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVP 1832
++M ++H G+ +A IH P
Sbjct: 629 ICKIMKEIHSGS----------------------------------------HAPTIHQP 648
Query: 1833 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 1892
L+ ++SP+PF W +D+IG + P S + +LV DYF+KW+EA SY ++ V
Sbjct: 649 AELLSSIASPYPFMRWSMDIIGPMHP--SKQKKLVLVLTDYFSKWIEAESYASIKDAQVE 706
Query: 1893 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 1952
F+ +I+CR+G+P +I+TDNG+ + Q C+++ I S+P PQ NG EAAN+
Sbjct: 707 NFVLKHILCRHGIPYEIVTDNGSQFISTRFQGFCDKWGIRLSKSTPRYPQGNGQAEAANE 766
Query: 1953 NIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLR 2012
L L +RTT R +T TPF+ +YG E V+P E+ +PSLR
Sbjct: 767 -------------------LEGVLWLHRTTPRRATRETPFASIYGTECVIPAEMIVPSLR 807
Query: 2013 VIMEAKLSEAEWCQSRYDQLNLIEE 2037
+ + ++ + Q+ D+L+LI+E
Sbjct: 808 RSLSPE-NDPDNTQTPLDELDLIDE 831
>At2g15410 putative retroelement pol polyprotein
Length = 1787
Score = 399 bits (1026), Expect = e-111
Identities = 200/497 (40%), Positives = 310/497 (62%), Gaps = 24/497 (4%)
Query: 1001 IPYEITRLLEQEKKAIQPHQEEIELINIGTEENKQEIKIGATLEEGVKQKVIQLLREYPD 1060
I Y + + Q+++ P + + +NI + + + I L ++ +++ LR+
Sbjct: 695 IIYNVILVPTQDERP-NPQKGTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAA 753
Query: 1061 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1120
FAWS EDMPG+D + H + P P++QK R+ PD + EV+K +DAG ++
Sbjct: 754 TFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVE 813
Query: 1121 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1180
V YP+W+ N V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV+ TA +++ SFMD
Sbjct: 814 VRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMD 873
Query: 1181 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1240
FSGYNQI M DREKT FIT GT+CYKVMPFGL NAGATY R + +F D + +E
Sbjct: 874 AFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSME 933
Query: 1241 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1300
VY+DDM+VKS E+H+ +L + F+ L +Y ++LNP+KCTFGV SG+ LG++V+++GIE
Sbjct: 934 VYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRGIEA 993
Query: 1301 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1360
+P ++ AI ++P+P+ ++V+ +GR+ ++RFIS T C P ++LLR N+ W+++C
Sbjct: 994 NPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKRFEWDEKC 1053
Query: 1361 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1420
+ EG L +Y+AV ++ VL ++D ++H I+Y+SK
Sbjct: 1054 E--------------------EGETLYLYIAVSTSAVSGVLVREDR--GEQHPIFYVSKT 1091
Query: 1421 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1480
E RY LEK A+ +A++LR Y ++T +++ P++ I + +G++A+W
Sbjct: 1092 LDGAELRYPTLEKLAFAVVISARKLRPYFKSYTVEVLTN-QPLRTILHSPSQSGRLAKWA 1150
Query: 1481 MLLSEYDIVFKTQKAIK 1497
+ LSEYDI +K + K
Sbjct: 1151 VELSEYDIAYKNRTCAK 1167
Score = 314 bits (805), Expect = 3e-85
Identities = 204/608 (33%), Positives = 297/608 (48%), Gaps = 72/608 (11%)
Query: 1583 FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYAR 1642
F +NN AEYEA I G+ A + +K + Y DS LV +Q G +E + + Y R
Sbjct: 1190 FPASNNEAEYEALIAGLRLAHGIEVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVR 1249
Query: 1643 RLLTYFTKVELHHIPRDENQMADALATLSSMFRVN-------HWNDVPIIRVQ-RLERPS 1694
L F EL IPR +N ADALA L+S + DVP I++Q + +PS
Sbjct: 1250 ELSYNFEVFELTKIPRSDNAPADALAVLASTSDPDLRRVIPVECIDVPSIKIQGTITKPS 1309
Query: 1695 HVFAIGDVIDQ--------------------AGENVIDYRP------------------- 1715
I +Q +G V P
Sbjct: 1310 EYTVIDLTAEQLSIVMVILPPATDRSEDAGPSGNLVCSSDPGQSSGCDRSDDSNRSADSD 1369
Query: 1716 ------WYYDIKQFLLSREYPPGASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLR 1766
W +I+ ++ R P +DK RRL R + L + L + + VLL
Sbjct: 1370 SPASTNWIEEIRSYIADRIVP-----KDKWAARRLRARSAQYTLPHEHLLRWSATGVLLS 1424
Query: 1767 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 1826
C+D+ EA+Q+M ++H+G G H+ G ++ K+ + G YW M DC ++ +C KCQ +A
Sbjct: 1425 CLDDEEAQQVMREIHEGAGGNHSGGRALALKIRKHGQYWPTMNADCEKFVARCEKCQGHA 1484
Query: 1827 DKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 1886
IH+P L P+PF W +D+I AS ++ILV DYFTKW EA SY +
Sbjct: 1485 PFIHIPSEVLQTAMPPYPFMRWAMDIIRPF--PASRQKKYILVMTDYFTKWFEAESYARI 1542
Query: 1887 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 1946
+ V F+ NIIC +G+P +I+TDNGT + + C ++KI S+P PQ NG
Sbjct: 1543 QSKEVQNFVWKNIICHHGLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQ 1602
Query: 1947 VEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2005
EA NK I ++K + K W + L L YRTT R ST TPFSL YGMEA+ P E
Sbjct: 1603 AEATNKTILDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCE 1662
Query: 2006 VEIPSLR---VIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVH 2062
+P++R +I + L++ Q D L+ +EE+R A+ R Q+YQ ++KKV
Sbjct: 1663 AGLPTVRRSMLINDPTLND----QMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVK 1718
Query: 2063 PREFKVGELVLKRKISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVN 2121
R F G+LVL++ + GK ++EGPY++ K G L MDG +P N
Sbjct: 1719 NRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWN 1778
Query: 2122 ADIVKKYF 2129
+ +K+Y+
Sbjct: 1779 SANLKRYY 1786
>At2g13330 F14O4.9
Length = 889
Score = 380 bits (975), Expect = e-105
Identities = 205/538 (38%), Positives = 302/538 (56%), Gaps = 59/538 (10%)
Query: 1135 KKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPED 1194
+K+GK R+C+DFRDLNKA PKD+FPLPHID LV+ T + + SFMD F GYNQI M +
Sbjct: 289 EKNGKWRVCIDFRDLNKACPKDSFPLPHIDRLVEATVEHEKLSFMDAFYGYNQILMRRDG 348
Query: 1195 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEE 1254
+EKT+FIT GT+ YKVMPFGL NAG TYQR + +F D + K +EVY+DDM+VKS E+
Sbjct: 349 QEKTAFITDRGTYYYKVMPFGLKNAGTTYQRLVNRMFVDQLGKTIEVYIDDMLVKSAHEK 408
Query: 1255 QHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAP 1314
HV L + F+ L K++++LNP KC+F V+S + L ++V+++GIE +P ++ A EMP+P
Sbjct: 409 DHVPQLRECFKILIKFEMKLNPEKCSFEVQSREFLEYLVTERGIEANPKQIAAFIEMPSP 468
Query: 1315 QTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEP 1374
+ ++V+ GR+ ++ FIS C P ++ LRK + WN +C++AF +K YL EP
Sbjct: 469 KMAREVQRLTGRIPALNGFISRSANKCVPFYQPLRKGKEFDWNKDCEQAFKQLKAYLTEP 528
Query: 1375 PILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKT 1434
PIL P +G PL +Y T+ + R +EK
Sbjct: 529 PILAKPEKGEPLYLY--------------------------------TNRDKRCPAMEKL 556
Query: 1435 CCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQK 1494
+ + ++LR Y +H ++ PI+ I +G++A+W + L EYDI ++T+
Sbjct: 557 ALTVVMSVRKLRLYFQSHPI-VVMTSQPIRTILHSLTQSGRLAKWAIELREYDIEYRTRT 615
Query: 1495 AIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLINEGPDPNSKWGLVFDG 1554
++K +LAD + PL D +G + N KW L DG
Sbjct: 616 SLKAQVLADFVIKLPLADL--------------------------DGTNSNKKWLLHVDG 649
Query: 1555 AVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYG 1614
+ N G G+G + SP G I + ++ F +NN +EYEA I GI+ A + I+ + Y
Sbjct: 650 SSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASNNESEYEALIAGIKLAQEKGIREIHAYS 709
Query: 1615 DSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSS 1672
DS LV +Q GE+E + Y + + L F +L IPR EN AD LA L+S
Sbjct: 710 DSQLVTSQFHGEYEAKDERMEAYLELVKTLAQQFESFKLTRIPRGENTSADTLAALAS 767
Score = 31.2 bits (69), Expect = 6.8
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 1023 IELINIGTEENKQEIKIGATLEEGVKQKVIQLLREYPDIFAWSYEDMPGL 1072
I + I + K+ + IG L+ V++ +I L+E D FAWS ++ G+
Sbjct: 237 ITQVCIDESDPKRCVGIGHDLDLTVREDLITFLKENKDSFAWSSANLQGI 286
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 324 bits (831), Expect = 3e-88
Identities = 158/355 (44%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 1095 RRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASP 1154
R+ + A + +EV K + G + V+YP+W+AN V V KK+GK R+C+DF DLNKA P
Sbjct: 470 RKLGVERAKAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACP 529
Query: 1155 KDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPF 1214
KD+FPLPHID LV++TA +++ SFMD FSGYNQI M+PED+EKT FIT G +CYKVMPF
Sbjct: 530 KDSFPLPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPF 589
Query: 1215 GLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRL 1274
GL NAGATY R + +F + + K +EVY+DDM++KS +E HV++L + F L +Y+++L
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649
Query: 1275 NPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFI 1334
NP KCTFGV SG+ LG+IV+++GIE +P+++ A MP+P+ K+V+ GR+ ++RFI
Sbjct: 650 NPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFI 709
Query: 1335 SHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFD 1394
S T P +++L+ N+ +W+++C+EAF +K YL PP+L P L +Y++V +
Sbjct: 710 SRSTDKSLPFYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVSN 769
Query: 1395 ESMGCVLGQQDETGKKEHAIYYLSKKFT-DCETRYTMLEKTCCALAWAAKRLRHY 1448
++ VL ++D G+++ Y + +F D E + + +E + AK R +
Sbjct: 770 HAVSGVLIREDR-GEQKPIYYIIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKF 823
Score = 219 bits (559), Expect = 1e-56
Identities = 161/538 (29%), Positives = 253/538 (46%), Gaps = 80/538 (14%)
Query: 1618 LVINQIKGEWETHHANLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMF--R 1675
+++NQ G++E + + Y + L F K EL IPR +N ADALA L+S
Sbjct: 790 IIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKFELIRIPRGQNTTADALAALASTSDPE 849
Query: 1676 VNHWNDVPIIRVQRLERPSHVFAIGDVIDQA---GENVIDYRPWYYDIKQFLLSREYPPG 1732
VN V I + ++ F + A G+ ++ P +K+ P
Sbjct: 850 VNSIIPVECISERSIKEEKEAFVVTRSRAAARDRGDTAVELPP----VKRRKSKEATVPK 905
Query: 1733 ASKQDKKTLRRLAGRFL-----------LDGDIL--------------YKRNYDMVLLRC 1767
+ Q+ + + +D DIL Y+R L
Sbjct: 906 PAVQENIGIELIEEVISDAKIEAETEPWVDEDILAPNEHPEPEALNSLYRRGVSDPYLLS 965
Query: 1768 VDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYAD 1827
+ E +M +VH+G G+H++G M+ K+ + YYW M DC +YA++C +CQ++A
Sbjct: 966 IFGPVVEIVMSEVHEGLCGSHSSGRAMAFKIKKMCYYWPTMITDCVKYAQRCKRCQLHAP 1025
Query: 1828 KIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 1887
IH P + +S+P+PF W +D+IG + +++ G +++LV DYF+KW+EA +
Sbjct: 1026 LIHQPSELFSSISAPYPFMRWSMDIIGPLH-RSTRGVQYLLVLTDYFSKWIEAEA----- 1079
Query: 1888 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 1947
I+ +G+ K+ + S+ PQ NG
Sbjct: 1080 -----------ILLNWGI------------------------KVSY--STLRYPQGNGQA 1102
Query: 1948 EAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 2006
EAANK I ++K + K W++ L L YRTT R STG TPFSLVYGM+AV+P E+
Sbjct: 1103 EAANKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTGETPFSLVYGMKAVVPAEL 1162
Query: 2007 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 2066
+P LR EA L+E E D L+ I E+R A+ + Q+YQ ++ KV R F
Sbjct: 1163 NVPGLR-RTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAARYYNSKVKSRPF 1221
Query: 2067 KVGELVLKRKI-SQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 2123
VG+ VLKR +++ + GK N+EGPY+V + G L ++ + P N +
Sbjct: 1222 FVGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLEDRPVQRPWNVN 1279
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 309 bits (791), Expect = 1e-83
Identities = 221/783 (28%), Positives = 377/783 (47%), Gaps = 92/783 (11%)
Query: 1355 VWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAI 1414
+WN+ C+EAF +K YL EP +L G L +Y+AV + ++ V + + + K+ I
Sbjct: 630 IWNESCEEAFKQLKRYLSEPSVLAKREFGEQLFLYIAVSESAVTGVQVRVERSDKR--PI 687
Query: 1415 YYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTG 1474
+Y+ +TRY M+EK A+ AA++LR Y +H +++ + P++ I +G
Sbjct: 688 FYV-------KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSL-PLRTILHSPTQSG 739
Query: 1475 KIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCE 1534
++ +W + LSE+D+ F+ + ++ ++ ++ F +++S++
Sbjct: 740 RLGKWAIELSEFDLEFRARTSLNSTMDTSR------------QWGFIK---TWVRSRN-- 782
Query: 1535 EPLINEGPDPNSKWG--LVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEY 1592
+++ P N G D + AY + V G F + N+ A
Sbjct: 783 ---LSDAPTANRYSGEYEAKDACMEAYLNLVREV----SGRFEQFELTRIPRAENSAANA 835
Query: 1593 EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRLLTYFTKVE 1652
A + E R+ ++ ++ +++I + + R RRL +
Sbjct: 836 LAALASTFEVTLPRVIPVETISQPSIRLDEI---------SFVTTRAMRRRLDAQSAENG 886
Query: 1653 LHHIPRDENQMADAL----ATLSSMFRVNHWNDVPIIRVQRLERPSHVFAIGDVIDQAGE 1708
LH + DE +++DA+ + NH +P ++P H +
Sbjct: 887 LHQLGDDE-EISDAVHPTEIVENQSLPDNHNAPLP-------DQPPHDWG---------- 928
Query: 1709 NVIDYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCV 1768
W I+ ++L+ P A K + L+ RF + DILY+R + C+
Sbjct: 929 -----ADWREPIRDYILNGTLP--AEKWAARKLKATCARFCIANDILYRRIFSAPDAVCI 981
Query: 1769 DEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADK 1828
+ +M +VHDGT G H G +++ K+ + GYYW + DC YARKC +CQ +A
Sbjct: 982 FGEQTRTVMKEVHDGTCGNHTGGRSLAFKVRKYGYYWPTLVADCEAYARKCEQCQKHAPL 1041
Query: 1829 IHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTK 1888
I P L +S+P+PF W +D++G + T+ VEAA+Y+N+T
Sbjct: 1042 ILQPAELLTTVSAPYPFMKWLMDIVGPLHVS---------------TRGVEAAAYSNITH 1086
Query: 1889 QVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVE 1948
V FI +IICR+G+P +I+TDNG+ + + CEE++I +S+P PQ NG E
Sbjct: 1087 VQVWNFIWKDIICRHGLPYEIVTDNGSQFISEQFEVFCEEWQIRLSHSTPRYPQGNGQAE 1146
Query: 1949 AANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVE 2007
A NK I ++K + YK W L L RTT R +T TPFSL+YGMEAV+P E++
Sbjct: 1147 AMNKTIISNLKKKLNAYKGAWFGELQNVLWAVRTTPRRATDETPFSLIYGMEAVIPAEIK 1206
Query: 2008 IPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFK 2067
+PS R I + +E E + D ++ I+E+R A+AR Q+Y ++ V R F+
Sbjct: 1207 VPSARRIRNPQ-NETENNEMIIDVIDTIDERRNRALARMQNYHNAGARYYNSNVRNRSFE 1265
Query: 2068 VGELVLKRKISQQPDP-RGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVK 2126
VG LVL+R + + GK ++EGPY + G L +M+G + N+ +K
Sbjct: 1266 VGTLVLRRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLK 1325
Query: 2127 KYF 2129
+++
Sbjct: 1326 RFY 1328
Score = 172 bits (435), Expect = 2e-42
Identities = 84/151 (55%), Positives = 106/151 (69%)
Query: 1069 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1128
M G+ ++ H + P PV+QK R+ PD A + EV + ++ G + V+YPEW+A
Sbjct: 412 MTGISTEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPEWLA 471
Query: 1129 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1188
N V V KK+GK R+CVDF DLNKA KD FPLPHID LV++T ++ SFMD FSGYNQI
Sbjct: 472 NPVVVKKKNGKWRVCVDFTDLNKACSKDFFPLPHIDRLVESTTGHEMLSFMDAFSGYNQI 531
Query: 1189 KMSPEDREKTSFITPWGTFCYKVMPFGLINA 1219
M+PED+EKTSFIT GT+ YKVMPFGL NA
Sbjct: 532 LMNPEDQEKTSFITECGTYYYKVMPFGLKNA 562
>At2g14380 putative retroelement pol polyprotein
Length = 764
Score = 295 bits (755), Expect = 2e-79
Identities = 140/282 (49%), Positives = 198/282 (69%)
Query: 1068 DMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWV 1127
DM G+DP + H + P V+QK R+ P+ + + +EV K +DAG ++ V+YPEW+
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535
Query: 1128 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1187
AN V V KK+ K R+C+DF DLNKA PKD+FPLPHID +V+ T +++ SFMD FSGYNQ
Sbjct: 536 ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQ 595
Query: 1188 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMI 1247
I M +D+EKTSFI GT+CYKVMPFGL N GA YQR + +F + K +EVY+DDM+
Sbjct: 596 IPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDML 655
Query: 1248 VKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1307
VKST H+++L FE L KY ++LNP KC FGV SG+ LG+IV+++GIE +P ++RA
Sbjct: 656 VKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRGIEANPKQIRA 715
Query: 1308 IREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLR 1349
I ++ +P+ +K+V+ GR+ ++RFI+ T P ++LLR
Sbjct: 716 ILDLQSPRNKKEVQRLTGRIAGLNRFIARSTDKSLPFYQLLR 757
>At1g37200 hypothetical protein
Length = 1564
Score = 287 bits (734), Expect = 5e-77
Identities = 136/298 (45%), Positives = 200/298 (66%), Gaps = 4/298 (1%)
Query: 1018 PHQEEIELINIGTEENKQEIKIGATLEEGVKQKVIQLLREYPDIFAWSYEDMPGLDPMIV 1077
P + I + I + KQ + +G L+ +++ I L+E D FAWS ++ G+ +
Sbjct: 614 PQKSSITQVYIDESDPKQCVGVGQDLDPAIREDFITFLKENKDSFAWSSANLQGISLEVT 673
Query: 1078 EHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKD 1137
H + P P++QK R+ P+ A +++EV + + G + V+YP+W+AN V V K+
Sbjct: 674 SHELNVDPTYRPIKQKRRKLGPERAKAVQDEVDRLLKIGSIREVKYPDWLANPVVVKNKN 733
Query: 1138 GKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREK 1197
GK R+C+DF DLNKA PKD+FPLPHID LV TA ++ SFMD FSGYNQI M P+D+EK
Sbjct: 734 GKWRVCIDFMDLNKACPKDSFPLPHIDRLVKATAGHELLSFMDAFSGYNQILMRPDDQEK 793
Query: 1198 TSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHV 1257
T+FIT CYKVMPFGL N GATYQR + +F D + K +E+Y+DDM+VKS E+ H+
Sbjct: 794 TAFITD----CYKVMPFGLKNTGATYQRLVNRMFADQLGKTMELYIDDMLVKSAHEKDHL 849
Query: 1258 EYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQ 1315
L + F+ L K++++LNP KC+FGV SG+ LG++V+Q+GIE +P ++ A +MP+P+
Sbjct: 850 PQLRECFKILNKFEMKLNPEKCSFGVPSGEFLGYLVTQRGIEANPKQIAAFIDMPSPK 907
Score = 243 bits (620), Expect = 9e-64
Identities = 167/555 (30%), Positives = 258/555 (46%), Gaps = 91/555 (16%)
Query: 1405 DETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIK 1464
D G+K IYY+SK D ET Y +EK A+ +A++LR YL +H ++ PI+
Sbjct: 927 DHEGQKP--IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPI-VVMTSQPIR 983
Query: 1465 YIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEE 1524
I + ++A+W + LSEYDI ++T+ + K +LAD + PL D
Sbjct: 984 TILHSTTQSSRLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADL----------- 1032
Query: 1525 IMYLKSKDCEEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFE 1584
+G + N KW L DG+ N G G G + SP G I + R+ F
Sbjct: 1033 ---------------DGTNSNKKWLLHVDGSSNRQGSGEGIQLTSPTGEVIEQSFRLGFN 1077
Query: 1585 CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHANLIPYRDYARRL 1644
+NN +EYEA I GI+ A MRI+ + + DS LV +Q GE+E + Y + + L
Sbjct: 1078 ASNNESEYEALIDGIKLAQGMRIRDIHAHSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 1137
Query: 1645 LTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIRVQRLERPSHVFAI----- 1699
F EL IPR EN DALA L+S +P V+ +E PS +
Sbjct: 1138 TQQFESFELTRIPRGENTSTDALAALASTLDPFVKRIIP---VEGIEHPSIDLTVKHAGM 1194
Query: 1700 ----------------------------GDVIDQA----GENVIDYRP-----WYYDIKQ 1722
G ++A E + Y P W I
Sbjct: 1195 ETSATCNFTRVTRSTTAAARALAAAAEAGAAEEEAKLRTPEQLASYEPEPYNDWRIPIID 1254
Query: 1723 FLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHD 1782
++ PP K + + L+ + R+ + L KR+ + C + + LM +H+
Sbjct: 1255 YIERGITPP--DKWETRKLKAQSARYCIMEGRLMKRSVAGPYMVCTYGQQTKDLMKSMHE 1312
Query: 1783 GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSP 1842
G G+H +G T+ +L DC ++ +C KCQ +A +H PP ++ +SSP
Sbjct: 1313 GQCGSHYSGRTLRCIMLA----------DCIAHSLRCDKCQRHAPTLHQPPEEMSSISSP 1362
Query: 1843 WPFSMWGIDMIGRIEPKASNGH---RFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNI 1899
+PF W +D++ +E AS G + +LV DY TKW+E ++ VT++ V F+ NI
Sbjct: 1363 YPFMKWSMDVVRPME--ASGGKKRLKNLLVLTDYSTKWIEGKAFQQVTEKQVEVFLLENI 1420
Query: 1900 ICRYGVPSKIITDNG 1914
+ R+G+P +I+TDNG
Sbjct: 1421 VYRHGIPYEIVTDNG 1435
Score = 51.2 bits (121), Expect = 6e-06
Identities = 34/98 (34%), Positives = 52/98 (52%), Gaps = 2/98 (2%)
Query: 2033 NLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRKISQQPD-PRGKWTPNY 2091
+ I+E+R AM + Q+YQ ++ + R F+VGELVL++ S + GK N+
Sbjct: 1465 DFIDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNW 1524
Query: 2092 EGPYVVKKAFSGGALILTHM-DGVELPNPVNADIVKKY 2128
EGPY + + G L + +GV P NA +KKY
Sbjct: 1525 EGPYRITEVVRDGIYKLVKVFNGVPELRPWNAMHLKKY 1562
>At4g03800
Length = 637
Score = 274 bits (700), Expect = 5e-73
Identities = 138/337 (40%), Positives = 214/337 (62%), Gaps = 21/337 (6%)
Query: 1069 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1128
MP +DP I+ H + P P++QK R+ + A + ++ K + G + V+YP+WVA
Sbjct: 321 MPDIDPSIICHELNVDPRFKPLKQKRRKLGVERAKAVNGKIDKLLKIGSIREVQYPDWVA 380
Query: 1129 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1188
V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV++TA +++ +FMD F GYNQI
Sbjct: 381 ITVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFLGYNQI 440
Query: 1189 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1248
M+PED+EKTSFIT + GATYQ + +F++ + K +EV +DD +V
Sbjct: 441 MMNPEDQEKTSFIT---------------DRGATYQWLVNKMFNEHLRKTMEVSIDDTLV 485
Query: 1249 KSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1308
KS +E HV++L + FE L +Y+++LN KCTFGV SG+ LG+IV+++GIE +P+++ A
Sbjct: 486 KSLKKEDHVKHLGECFEILNQYQMKLNLAKCTFGVPSGEFLGYIVTKRGIEANPNQINAF 545
Query: 1309 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1368
+ P+ + K+V+ GR+ S T P +++L+ N +W+++C+EAF +K
Sbjct: 546 LKTPSLRNFKEVQRLTGRI------ASRSTDKSLPFYQILKGNNGFLWDEKCEEAFRQLK 599
Query: 1369 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQD 1405
YL PP+L P L +Y+ V + ++ VL ++D
Sbjct: 600 AYLTTPPVLSKPEADEKLYLYVFVSNHAVSGVLVRED 636
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 266 bits (681), Expect = 7e-71
Identities = 157/497 (31%), Positives = 252/497 (50%), Gaps = 49/497 (9%)
Query: 1051 VIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1110
+I L +Y +S +D+ G+ P + HRI + E + RR +P++ +K E+
Sbjct: 861 LITELMKYRKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRLNPNLKEVVKKEIL 920
Query: 1111 KQIDAGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKA 1152
K +DAG + + WV+ + VPKK G RMC+++R LN A
Sbjct: 921 KLLDAGVIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITGHRMCIEYRKLNVA 980
Query: 1153 SPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVM 1212
S K++FPLP ID +++ A + F+D +SG+ QI + P D+ KT+F P+GTF YK M
Sbjct: 981 SRKEHFPLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTTFTCPYGTFAYKRM 1040
Query: 1213 PFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKL 1272
PFGL NA AT+QR MT++F D+I + VEV++DD V + + L ++ +R + L
Sbjct: 1041 PFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLNLCRVLKRCEETNL 1100
Query: 1273 RLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISR 1332
LN KC F VR G +LG +S++GIEVD K+ + ++ P+T K +R FLG +
Sbjct: 1101 VLNWEKCHFMVREGIVLGRKISEEGIEVDKAKIDVMMQLQPPKTVKDIRSFLGHAGFYRI 1160
Query: 1333 FISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAV 1392
FI + P+ +LL K ++DEC AF IK L+ PI+ P P +
Sbjct: 1161 FIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQAPNWDFPFEII--- 1217
Query: 1393 FDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNH 1452
D + RY EK A+ +A ++ R YLV
Sbjct: 1218 ---------------------------TMDDAQVRYATTEKELLAVVFAFEKFRSYLVGS 1250
Query: 1453 TTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDD 1512
+ + +++I+ K ++ RW +LL E+D+ +K I+ + ADHL+ ++D
Sbjct: 1251 KVTIYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGV-ADHLSRMRIED 1309
Query: 1513 YQPIEFDFPDEEIMYLK 1529
I+ P+E++M ++
Sbjct: 1310 EVLIDDSMPEEQLMAIQ 1326
Score = 202 bits (515), Expect = 1e-51
Identities = 142/417 (34%), Positives = 207/417 (49%), Gaps = 39/417 (9%)
Query: 1715 PWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAE 1774
PWY D +L+S E PP S +KK + F D LY D + CV E E E
Sbjct: 1334 PWYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIE 1393
Query: 1775 QLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPP 1833
++ H +G H AT TMS K+L+AG++W +M D ++ KC +
Sbjct: 1394 GILLHCHGFAYGGHFATFKTMS-KILQAGFWWPSMFKDAQEFISKCDSFE---------- 1442
Query: 1834 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA-ASYTNVTKQVVA 1892
F +WGID +G +S G+++ILVAIDY +KWVEA AS+TN +VV
Sbjct: 1443 ----------NFDVWGIDFMGPF--PSSYGNKYILVAIDYVSKWVEAIASHTN-DARVVL 1489
Query: 1893 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 1952
K K I R+GVP +I+D G + N + L ++ ++H S G VE +N+
Sbjct: 1490 KLFKTIIFPRFGVPRIVISDGGKHFINKGFENLLKKHGVKHKTS--------GQVEISNR 1541
Query: 1953 NIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2011
IK I++K V +T KDW L L YRT ++ G TPF+L+YG LP+E+E ++
Sbjct: 1542 EIKAILEKTVGSTRKDWSAKLNDTLWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAM 1601
Query: 2012 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2071
+ + R QLN + + R++A + Y+ R K+ DKK+ R+FKVG+
Sbjct: 1602 WAVKLLNFDIKTAEEKRLIQLNDLNKIRLEAYESSKIYKERTKSFHDKKIVSRDFKVGDQ 1661
Query: 2072 VLKRKISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2128
VL + P GK + GP+ V GA+ L +G VN +KKY
Sbjct: 1662 VLLFNSRLRLFP-GKLKSRWSGPFSVTAVRPYGAITLAGKNG---DFTVNGQRLKKY 1714
>At2g10780 pseudogene
Length = 1611
Score = 266 bits (679), Expect = 1e-70
Identities = 156/461 (33%), Positives = 248/461 (52%), Gaps = 18/461 (3%)
Query: 1038 KIGATLEEGVKQKVIQLLREYPDIFAWSYEDMPGL-DPMIVEHRIPTKPECPPVRQKLRR 1096
++GA+ E K I ++ E+ D+FA P DP +E +P P+ + R
Sbjct: 615 EVGASAE----LKDIPIVNEFSDVFAAVSGVPPDRSDPFTIE----LEPGTTPISKAPYR 666
Query: 1097 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1156
P K+K ++++ +D GF+ P W A ++ V KKDG R+C+D+R LNK + K+
Sbjct: 667 MAPAEMAKLKKQLEELLDKGFIRPSSSP-WGAPVLFVKKKDGSFRLCIDYRGLNKVTVKN 725
Query: 1157 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1216
+PLP ID L+D ++ FS +D SGY+QI + P D KT+F T + F + VMPFGL
Sbjct: 726 KYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYDHFEFVVMPFGL 785
Query: 1217 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNP 1276
NA A + + M +F D + + V ++++D++V S E H E+L + ERLR+++L
Sbjct: 786 TNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELFAKL 845
Query: 1277 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1336
+KC+F RS LG ++S +G+ VDP+K+R+I+E P P+ ++R FLG Y RF+
Sbjct: 846 SKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMS 905
Query: 1337 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1396
+ P+ +L K+ W+DEC+++F +K L P+LV P EG P +Y
Sbjct: 906 FASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVG 965
Query: 1397 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1456
+GCVL Q K I Y S++ E Y + A+ + K R YL +
Sbjct: 966 LGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRSYLYGAKVQI 1019
Query: 1457 ISRMDPIKYIFEKAAVTGKIARWQMLLSEY--DIVFKTQKA 1495
+ +KYIF + + + RW L+++Y DI + KA
Sbjct: 1020 YTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKA 1060
Score = 97.4 bits (241), Expect = 8e-20
Identities = 102/482 (21%), Positives = 199/482 (41%), Gaps = 45/482 (9%)
Query: 1651 VELHHIPRDENQMADALATLSSMFRVNHWNDVPIIRVQRLERPSHVFAIGDVIDQAGENV 1710
+++ + P NQ+ADAL+ S + V ++ + HV A+ ++ G
Sbjct: 1051 LDIAYHPGKANQVADALSRRRSEVEAER-SQVDLVNMMGT---LHVNALSKEVEPLGLGA 1106
Query: 1711 IDYRPWYYDIKQFLLSREYPPGASKQDKKTLRRLA-GRFLLDGDILYKRNYDMVLLRCVD 1769
D I+ E G ++ +K + G +++G + CV
Sbjct: 1107 ADQADLLSRIRLAQERDEEIKGWAQNNKTEYQTSNNGTIVVNGRV------------CVP 1154
Query: 1770 EHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYAD 1827
A E+++ + H F H + M R L R Y+W+ M+ D ++ KC CQ+
Sbjct: 1155 NDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMKKDVARWVAKCPTCQLVKA 1213
Query: 1828 KIHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 1886
+ VP L + P W + +D + + + H + V +D TK + ++
Sbjct: 1214 EHQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISDK 1273
Query: 1887 T-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNG 1945
+++A+ + I+ +G+P I++D T + +A + + S+ Y PQ +
Sbjct: 1274 DGAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDE 1333
Query: 1946 AVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPL 2004
E + ++ +++ V + +W + L Y + ++S G +P+ +YG PL
Sbjct: 1334 QSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTPL 1393
Query: 2005 EVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPR 2064
+ E +L +++ ++ K +A R +SY +K+
Sbjct: 1394 -----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRRKEL 1441
Query: 2065 EFKVGELVLKRKISQQP----DPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPV 2120
EF+VG+LV + ++ + R K +P Y GPY V + A L +LP +
Sbjct: 1442 EFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKL------DLPPKL 1495
Query: 2121 NA 2122
NA
Sbjct: 1496 NA 1497
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 263 bits (671), Expect = 1e-69
Identities = 150/456 (32%), Positives = 246/456 (53%), Gaps = 13/456 (2%)
Query: 1052 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1110
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 457 IRVVQEFQDVF----QSLQGLPPSQSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLK 512
Query: 1111 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1170
+ GF+ P W A ++ V KKDG R+C+D+R+LN+ + K+ +PLP ID L+D
Sbjct: 513 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQL 571
Query: 1171 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1230
+ FS +D SGY+QI ++ D KT+F T +G F + VMPFGL NA A + R M ++
Sbjct: 572 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSV 631
Query: 1231 FHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1290
F + + + V +++DD++V S E+ +L ++ E+LR+ KL +KC+F R LG
Sbjct: 632 FQEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLG 691
Query: 1291 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1350
IVS +G+ VDP+K+ AIR+ P P ++R FLG Y RF+ + P+ KL K
Sbjct: 692 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGK 751
Query: 1351 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1410
+ P VW+ EC+E F S+K L P+L P G+P ++Y +GCVL Q +
Sbjct: 752 DVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHGK---- 807
Query: 1411 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1470
I Y S++ E Y + A+ +A K R YL + + +KYIF +
Sbjct: 808 --VIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQP 865
Query: 1471 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1506
+ + RW L+++YD+ K +++ D L+
Sbjct: 866 ELNLRQRRWMELVADYDLEIAYHPG-KANVVVDALS 900
Score = 32.7 bits (73), Expect = 2.3
Identities = 28/113 (24%), Positives = 50/113 (43%), Gaps = 10/113 (8%)
Query: 1799 LRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSP-WPFSMWGIDMIGRIE 1857
L+ Y W+ M+ D + +C CQ+ + V L + P W + +D++ +
Sbjct: 965 LKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFITMDLV--VG 1022
Query: 1858 PKASNGHRFILVAIDYFTKWVEAASYTNVTK----QVVAKFIKNNIICRYGVP 1906
+ S I V +D TK +A + + K V+AK + I+ +GVP
Sbjct: 1023 LRVSRTKDAIWVIVDRLTK---SAHFLAIRKTDGAAVLAKKFVSEIVKLHGVP 1072
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 258 bits (660), Expect = 2e-68
Identities = 149/456 (32%), Positives = 244/456 (52%), Gaps = 13/456 (2%)
Query: 1052 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1110
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 483 IRVIQEFEDVF----QSLQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMTELKKQLE 538
Query: 1111 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1170
+ GF+ P W A ++ V KKDG R+C+D+R LN + K+ +PLP ID L+D
Sbjct: 539 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQL 597
Query: 1171 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1230
+ FS +D SGY+QI ++ D KT+F T +G F + VMPF L NA A + R M ++
Sbjct: 598 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSV 657
Query: 1231 FHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1290
F + + + V +++DD++V S E+H +L ++ E+LR+ KL +KC+F R LG
Sbjct: 658 FQEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLG 717
Query: 1291 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1350
IVS +G+ VDP+K+ AIR+ P P ++R FL Y RF+ + P+ KL K
Sbjct: 718 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGK 777
Query: 1351 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1410
+ P VW+ EC+E F S+K L P+L P G+P ++Y +GCVL Q+ +
Sbjct: 778 DVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQRGK---- 833
Query: 1411 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1470
I Y S++ E Y + + +A K R YL + + +KYIF +
Sbjct: 834 --VIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQP 891
Query: 1471 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1506
+ + RW L+++YD+ K +++AD L+
Sbjct: 892 ELNLRQMRWMELVADYDLEIAYHPG-KANVVADALS 926
Score = 77.8 bits (190), Expect = 6e-14
Identities = 76/336 (22%), Positives = 136/336 (39%), Gaps = 57/336 (16%)
Query: 1769 DEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADK 1828
DE +++ + H F H M R L R Y W+ M+ D + +C CQ+ +
Sbjct: 1012 DEELRREILSEAHASMFSIHPGATKMYRDLKRY-YQWVGMKRDVANWVAECDVCQLVKAE 1070
Query: 1829 IHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTK 1888
VP ++W V +D TK +A + + K
Sbjct: 1071 HQVPD------------AIW--------------------VIMDRLTK---SAHFLAIRK 1095
Query: 1889 Q----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 1944
V+AK + I+ +GVP I++D + +A + + S+ Y PQ +
Sbjct: 1096 TDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTD 1155
Query: 1945 GAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLP 2003
G E + ++ +++ V + W + L Y + ++S G PF +YG P
Sbjct: 1156 GQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTP 1215
Query: 2004 LEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHP 2063
L + E + A++ Q +++ +++ +A AR +SY DK+
Sbjct: 1216 LR-----WTQVEERSIYGADYVQETTERIRVLKLNMKEAQARQRSYA-------DKRRRE 1263
Query: 2064 REFKVGELV-LKRKISQQPDP---RGKWTPNYEGPY 2095
EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1264 LEFEVGDRVYLKMAMLRGPNRSILETKLSPRYMGPF 1299
>At3g11970 hypothetical protein
Length = 1499
Score = 251 bits (641), Expect = 3e-66
Identities = 162/506 (32%), Positives = 268/506 (52%), Gaps = 27/506 (5%)
Query: 1011 QEKKAIQPHQEEIELINIGTEENKQEIKI----GATLEEGVKQKVIQLLREYPDIFAWSY 1066
Q+ + +Q Q ++ ++ + E ++ T E G + V ++L EYPDIF
Sbjct: 521 QKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVEEVLNEYPDIFI--- 577
Query: 1067 EDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDA----GFLMT 1120
+ L P +H +I PV Q+ R ++ KNE+ K ++ G +
Sbjct: 578 -EPTALPPFREKHNHKIKLLEGSNPVNQRPYR----YSIHQKNEIDKLVEDLLTNGTVQA 632
Query: 1121 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1180
P + + +V V KKDG R+CVD+R+LN + KD+FP+P I+ L+D + +FS +D
Sbjct: 633 SSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 1181 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1240
+GY+Q++M P+D +KT+F T G F Y VMPFGL NA AT+Q M +F + K V
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 1241 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1300
V+ DD++V S+ E+H ++L ++FE +R KL +KC F V + LG +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 1301 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1360
DP K++A++E P P T KQ+RGFLG Y RF+ GP+ L K W
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPL-HALTKTDAFEWTAVA 870
Query: 1361 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1420
Q+AF+ +K L + P+L P+ + ++ + +G VL Q+ H + Y+S++
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEG------HPLAYISRQ 924
Query: 1421 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1480
+ ++ EK A+ +A ++ RHYL+ + + +KY+ E+ T +W
Sbjct: 925 LKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWL 984
Query: 1481 MLLSEYDIVFKTQKAIKGSILADHLA 1506
L E+D + ++ K +++AD L+
Sbjct: 985 PKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 83.2 bits (204), Expect = 2e-15
Identities = 86/327 (26%), Positives = 138/327 (41%), Gaps = 25/327 (7%)
Query: 1780 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVM 1839
+H G H+ G ++ + ++ +YW M D Y R C CQ P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 1840 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 1897
P P ++W + IE S G I+V +D +K + ++ + VA +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLD 1204
Query: 1898 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 1957
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 1958 VQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2016
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2017 AKLS-EAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVL-- 2073
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVYVK 1371
Query: 2074 ---KRKISQQPDPRGKWTPNYEGPYVV 2097
R+ S K +P Y GPY +
Sbjct: 1372 LQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At1g36590 hypothetical protein
Length = 1499
Score = 251 bits (641), Expect = 3e-66
Identities = 162/506 (32%), Positives = 268/506 (52%), Gaps = 27/506 (5%)
Query: 1011 QEKKAIQPHQEEIELINIGTEENKQEIKI----GATLEEGVKQKVIQLLREYPDIFAWSY 1066
Q+ + +Q Q ++ ++ + E ++ T E G + V ++L EYPDIF
Sbjct: 521 QKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVEEVLNEYPDIFI--- 577
Query: 1067 EDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDA----GFLMT 1120
+ L P +H +I PV Q+ R ++ KNE+ K ++ G +
Sbjct: 578 -EPTALPPFREKHNHKIKLLEGSNPVNQRPYR----YSIHQKNEIDKLVEDLLTNGTVQA 632
Query: 1121 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1180
P + + +V V KKDG R+CVD+R+LN + KD+FP+P I+ L+D + +FS +D
Sbjct: 633 SSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 1181 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1240
+GY+Q++M P+D +KT+F T G F Y VMPFGL NA AT+Q M +F + K V
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 1241 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1300
V+ DD++V S+ E+H ++L ++FE +R KL +KC F V + LG +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 1301 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1360
DP K++A++E P P T KQ+RGFLG Y RF+ GP+ L K W
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPL-HALTKTDAFEWTAVA 870
Query: 1361 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1420
Q+AF+ +K L + P+L P+ + ++ + +G VL Q+ H + Y+S++
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEG------HPLAYISRQ 924
Query: 1421 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1480
+ ++ EK A+ +A ++ RHYL+ + + +KY+ E+ T +W
Sbjct: 925 LKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWL 984
Query: 1481 MLLSEYDIVFKTQKAIKGSILADHLA 1506
L E+D + ++ K +++AD L+
Sbjct: 985 PKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 78.6 bits (192), Expect = 4e-14
Identities = 85/327 (25%), Positives = 138/327 (41%), Gaps = 25/327 (7%)
Query: 1780 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVM 1839
+H G H+ G ++ + ++ +Y M D Y R C CQ P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 1840 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 1897
P P ++W + IE S G I+V +D +K + ++ + VA+ +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAQAYLD 1204
Query: 1898 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 1957
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 1958 VQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2016
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2017 AKLS-EAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVL-- 2073
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVYVK 1371
Query: 2074 ---KRKISQQPDPRGKWTPNYEGPYVV 2097
R+ S K +P Y GPY +
Sbjct: 1372 LQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 250 bits (639), Expect = 5e-66
Identities = 144/414 (34%), Positives = 228/414 (54%), Gaps = 16/414 (3%)
Query: 1038 KIGATLEEGVKQKVIQLLREYPDIFAWSYEDMPGL-DPMIVEHRIPTKPECPPVRQKLRR 1096
++GA+ E K I ++ E+ D+FA P DP +E +P P+ + R
Sbjct: 110 EVGASAE----LKDILIVNEFSDVFAAVSGVPPDRSDPFTIE----LEPGTTPISKAPYR 161
Query: 1097 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1156
P ++K ++++ + GF+ P W A ++ V KKDG R+C+D+R LNK + K+
Sbjct: 162 MAPAEMAELKKQLEELLAKGFIRPSSSP-WGAPVLFVKKKDGSFRLCIDYRGLNKVTVKN 220
Query: 1157 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1216
+PLP ID L+D ++ FS +D SGY+QI + P D KT+F T +G F + VMPFGL
Sbjct: 221 KYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYGHFEFVVMPFGL 280
Query: 1217 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNP 1276
NA A + + M +F D + + V +++DD++V S E H E+L + ERLR+++L
Sbjct: 281 TNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVHSKSWEAHQEHLRAVLERLREHELFAKL 340
Query: 1277 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1336
+K +F RS LG ++S +G+ VDP+K+R+I+E P P+ ++R FLG Y RF+
Sbjct: 341 SKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMS 400
Query: 1337 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1396
+ P+ +L K+ W+DEC+++F +K L+ P+LV P EG P +Y
Sbjct: 401 FASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLINAPVLVLPEEGEPYTVYTDASIVG 460
Query: 1397 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLV 1450
+GCVL Q K I Y S++ E Y + A+ +A K R YL+
Sbjct: 461 LGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLI 508
Score = 101 bits (251), Expect = 5e-21
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 22/340 (6%)
Query: 1767 CVDEHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQI 1824
CV A E+++ + H F H + M R L R Y+W+ M D ++ KC CQ+
Sbjct: 544 CVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMRKDVARWVAKCPTCQL 602
Query: 1825 YADKIHVPPHAL-NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 1883
+ VP L N+ S W + +D + R+ + H + V +D TK +
Sbjct: 603 VKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSAHFMAI 662
Query: 1884 TNVT-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQ 1942
++ +++A+ + I+ +G+P I++D T + A + + S+ Y PQ
Sbjct: 663 SDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQ 722
Query: 1943 MNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 2001
+G E + ++ +++ V + +W + L Y + ++S G +P+ +YG
Sbjct: 723 TDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACR 782
Query: 2002 LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 2061
PL + E +L +++ ++ K +A R +SY +K+
Sbjct: 783 TPL-----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRR 830
Query: 2062 HPREFKVGELVLKRKISQQP----DPRGKWTPNYEGPYVV 2097
EF+VG+LV + ++ + R K +P Y GPY V
Sbjct: 831 KELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKV 870
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 249 bits (637), Expect = 9e-66
Identities = 153/501 (30%), Positives = 253/501 (49%), Gaps = 25/501 (4%)
Query: 1009 LEQEKKAIQPHQEEIELINIGTEENKQEIKIGATLEEGVKQKVIQLLREYPDIFAWSYED 1068
L+ + + + E L+ G + I A E + +K + E+ D+F +
Sbjct: 401 LDCHRGRVSFERPEGSLVYQGVRPTSGSLVISAVQAEKMIEKGCEAYLEFEDVF----QS 456
Query: 1069 MPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWV 1127
+ GL P + I +P P+ + R P ++K +++ + A L
Sbjct: 457 LQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLLGAPVLF-------- 508
Query: 1128 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1187
V KKDG R+C+D+R LN + K+ +PLP ID L+D + FS +D SGY+
Sbjct: 509 -----VKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHL 563
Query: 1188 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMI 1247
I ++ D KT+F T +G F + VMPFGL NA A + R M ++F +++ + V +++DD++
Sbjct: 564 IPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDIL 623
Query: 1248 VKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1307
V S E+H +L ++ E+LR+ KL +KC+F R LG IVS +G+ VDP+K+ A
Sbjct: 624 VYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 683
Query: 1308 IREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSI 1367
IR+ P ++R FLG Y RF+ + P+ KL K+ P VW+ EC+E F S+
Sbjct: 684 IRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 743
Query: 1368 KNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETR 1427
K L P+L P G P ++Y +GCVL Q+ + I Y S++ E
Sbjct: 744 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGK------VIAYASRQLRKHEGN 797
Query: 1428 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1487
Y + A+ +A K R YL + + +KYIF + + + +W L+++YD
Sbjct: 798 YPTHDLEMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYD 857
Query: 1488 IVFKTQKAIKGSILADHLAYQ 1508
+ K +++AD L+++
Sbjct: 858 LEIAYHPG-KANVVADALSHK 877
Score = 70.1 bits (170), Expect = 1e-11
Identities = 70/295 (23%), Positives = 124/295 (41%), Gaps = 27/295 (9%)
Query: 1811 DCYQYARKCHKCQIYADKIHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILV 1869
D + +C CQ+ + VP L + P W + ID + + S I V
Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFV--VGLPVSRTKDAIWV 999
Query: 1870 AIDYFTKWVEAASYTNVTKQ----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQAL 1925
+D TK +A + + K V+AK + I+ +GVP I++D + + +A
Sbjct: 1000 IVDRLTK---SAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAF 1056
Query: 1926 CEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVR 1984
E + S+ Y PQ G E + ++ +++ V + W + L Y +
Sbjct: 1057 QAEMGTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYP 1116
Query: 1985 SSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMA 2044
+S G PF +Y PL L + E + A++ Q +++ +++ +A
Sbjct: 1117 ASIGMAPFEALYERPCRTPL-----CLTQVGERSIYGADYVQETTERIRVLKLNMKEAQD 1171
Query: 2045 RGQSYQARMKTAFDKKVHPREFKVGELV-LKRKISQQPD---PRGKWTPNYEGPY 2095
R +SY DK+ EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1172 RQRSYA-------DKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPF 1219
>At1g35370 hypothetical protein
Length = 1447
Score = 241 bits (616), Expect = 3e-63
Identities = 160/477 (33%), Positives = 255/477 (52%), Gaps = 21/477 (4%)
Query: 1032 ENKQEI-KIGATLEEGVKQKVIQ-LLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPP 1089
+ +QEI I A + V++ V+Q ++ E+PD+FA + P + +H+I P
Sbjct: 523 DEEQEIGSISALTSDVVEESVVQNIVEEFPDVFAEPTDLPPFREKH--DHKIKLLEGANP 580
Query: 1090 VRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDL 1149
V Q+ R +I VQ I +G + P + + +V V KKDG R+CVD+ +L
Sbjct: 581 VNQRPYRYVVHQKDEIDKIVQDMIKSGTIQVSSSP-FASPVVLVKKKDGTWRLCVDYTEL 639
Query: 1150 NKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCY 1209
N + KD F +P I+ L+D S VFS +D +GY+Q++M P+D +KT+F T G F Y
Sbjct: 640 NGMTVKDRFLIPLIEDLMDELGGSVVFSKIDLRAGYHQVRMDPDDIQKTAFKTHNGHFEY 699
Query: 1210 KVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRK 1269
VM FGL NA AT+Q M ++F D + K V V+ DD+++ S+ E+H E+L +FE +R
Sbjct: 700 LVMLFGLTNAPATFQSLMNSVFRDFLRKFVLVFFDDILIYSSSIEEHKEHLRLVFEVMRL 759
Query: 1270 YKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNY 1329
+KL F S + LG +S + IE DP K++A++E P P T KQVRGFLG Y
Sbjct: 760 HKL--------FAKGSKEHLGHFISAREIETDPAKIQAVKEWPTPTTVKQVRGFLGFAGY 811
Query: 1330 ISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMY 1389
RF+ + GP+ L K W+ E Q AFD++K L P+L PV + ++
Sbjct: 812 YRRFVRNFGVIAGPL-HALTKTDGFCWSLEAQSAFDTLKAVLCNAPVLALPVFDKQFMV- 869
Query: 1390 LAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYL 1449
E+ C G + +K H + Y+S++ + ++ EK A +A ++ RHYL
Sbjct: 870 -----ETDACGQGIRAVLMQKGHPLAYISRQLKGKQLHLSIYEKELLAFIFAVRKWRHYL 924
Query: 1450 VNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1506
+ + + +KY+ E+ T +W L E+D + ++ K +++AD L+
Sbjct: 925 LPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQYRQG-KENLVADALS 980
Score = 85.9 bits (211), Expect = 2e-16
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 26/347 (7%)
Query: 1790 TGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWG 1849
+G S + +++ +YW M D + R C CQ P L + P P +W
Sbjct: 1068 SGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPL--PIPDKIWC 1125
Query: 1850 IDMIGRIEPKASNGHR-FILVAIDYFTKWVEAASYTN-VTKQVVAKFIKNNIICRYGVPS 1907
+ IE ++G + I+V +D +K + + + VA+ +N+ +G P+
Sbjct: 1126 DVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPT 1185
Query: 1908 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD 1967
I++D ++ + + +E SS Y PQ +G E N+ ++ ++ M
Sbjct: 1186 SIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPH 1245
Query: 1968 -WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQ 2026
W++ LP A + Y T SS+ TPF LVYG + L +V + A+ Q
Sbjct: 1246 LWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARS-----LQ 1300
Query: 2027 SRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVL-----KRKISQQP 2081
R + L ++ M A Q RMK D+ R F +G+ V R+ S
Sbjct: 1301 ERENMLLFLKFHLMRA-------QHRMKQFADQHRTERTFDIGDFVYVKLQPYRQQSVVL 1353
Query: 2082 DPRGKWTPNYEGPY-VVKKAFSGGALILTHMDGVELPNPVNADIVKK 2127
K +P Y GPY +++K G ++ +LP+ V DI +K
Sbjct: 1354 RVNQKLSPKYFGPYKIIEKC--GEVMVGNVTTSTQLPS-VLPDIFEK 1397
>At2g14040 putative retroelement pol polyprotein
Length = 841
Score = 234 bits (596), Expect = 5e-61
Identities = 148/470 (31%), Positives = 230/470 (48%), Gaps = 77/470 (16%)
Query: 1055 LREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQID 1114
LR+Y +S +D+ G+ P + H I + E + RR + ++ +K E+ K +D
Sbjct: 340 LRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRLNSNLRDVVKKEIMKLLD 399
Query: 1115 AGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKASPKD 1156
AG + + WV+ + VPKK G + RMC+D+R LN A+ KD
Sbjct: 400 AGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTGHRMCIDYRKLNSATRKD 459
Query: 1157 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1216
NFPL ID +++ + + F+DG+ G+ QI + P+D+EKT+F P+GTF Y+ MPFGL
Sbjct: 460 NFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTTFTCPYGTFAYRRMPFGL 519
Query: 1217 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNP 1276
NA AT+Q M +F DMI +EV++DD +V E++H L LN
Sbjct: 520 CNAPATFQHCMKYIFSDMIEDFMEVFIDDFLVLQRCEDKH---------------LVLNW 564
Query: 1277 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1336
K F VR G +LG +S+KG+EVD K+ +R FLG + RFI
Sbjct: 565 EKSHFMVRDGIVLGHKISEKGVEVDRAKIEIMR-------------FLGHAGFYRRFIKD 611
Query: 1337 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1396
+ P +LL K Q ++D C +AF+ +K L+ I+ PP P + D
Sbjct: 612 FSKIARPCTQLLCKEQKSEFDDTCLQAFNIVKESLVSALIVQPPEWELPFEVICDASDYV 671
Query: 1397 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1456
+G VLGQ+ + KK HAIYY S+ + ++ HT
Sbjct: 672 VGAVLGQRKD--KKLHAIYYASRTLDGAQ-----------------------VIVHTVHA 706
Query: 1457 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1506
++Y+ K ++ RW +LL ++D+ K +K I+ + AD+L+
Sbjct: 707 -----ALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEV-ADNLS 750
>At2g10690 putative retroelement pol polyprotein
Length = 622
Score = 204 bits (519), Expect = 4e-52
Identities = 121/381 (31%), Positives = 202/381 (52%), Gaps = 18/381 (4%)
Query: 1154 PKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYN-------QIKMSPEDREKTSFITPWGT 1206
P D +P+ ++ D + +V ++ Y +++ + ++KT+F P GT
Sbjct: 119 PNDTYPV----IINDGLSDEQVNQLLNELRKYRGQLVVSFKLQFTLMIKKKTTFTCPNGT 174
Query: 1207 FCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSTDEEQHVEYLTKMFER 1266
F YK M FGL NA T+QR MT++F D I + +EV++DD S+ + L ++ ER
Sbjct: 175 FAYKRMSFGLCNAPGTFQRSMTSIFSDFIEEIMEVFMDDFSGFSSC----LLNLCRVLER 230
Query: 1267 LRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGR 1326
+ L LN KC F V G +LG +S KGIEVD K+ + ++ P+T K +R FLG
Sbjct: 231 CEETNLVLNWEKCHFMVHEGIVLGHKISGKGIEVDKAKIDVMIQLQPPKTVKDIRSFLGH 290
Query: 1327 LNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPL 1386
+ RFI + P+ +LL K ++++C +AF IK L+ PI P P
Sbjct: 291 AEFYRRFIKDFSKIARPLTRLLCKETEFNFDEDCLKAFHLIKETLVSAPIFQAPNWDHPF 350
Query: 1387 IMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1446
+ FD ++G VL Q+ + K H IYY S+ + +TRY +EK A+ +A +++R
Sbjct: 351 EIMCDAFDYAVGAVLDQKID--DKLHVIYYASRTMDEAQTRYATIEKELLAVVFAFEKIR 408
Query: 1447 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1506
YLV + +++I+ K ++ RW +LL E+D+ +K ++ + ADHL+
Sbjct: 409 SYLVGFKVKVYIDHAALRHIYAKKETKSRLLRWILLLQEFDMEIIDKKGVENGV-ADHLS 467
Query: 1507 YQPLDDYQPIEFDFPDEEIMY 1527
++D PI+ P+E++M+
Sbjct: 468 RMRIEDSVPIDDTMPEEQLMF 488
Score = 53.5 bits (127), Expect = 1e-06
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1944 NGAVEAANKNIKRIVQKMVTTYK-DWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVL 2002
+G VE +N+ +K I+ K+V K DW L L YRT ++ G TPF ++YG L
Sbjct: 525 SGQVEVSNRQMKDILTKVVGVSKRDWSTKLDETLWAYRTAYKTPIGRTPFQMLYGKSCHL 584
Query: 2003 PLEVEIPSL 2011
P+EVE ++
Sbjct: 585 PVEVEYKAI 593
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.340 0.149 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,598,977
Number of Sequences: 26719
Number of extensions: 1876594
Number of successful extensions: 7063
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 6664
Number of HSP's gapped (non-prelim): 292
length of query: 2129
length of database: 11,318,596
effective HSP length: 115
effective length of query: 2014
effective length of database: 8,245,911
effective search space: 16607264754
effective search space used: 16607264754
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC139745.5