BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.2 + phase: 0
(98 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g34430 putative photosystem II type I chlorophyll a/b binding... 182 2e-47
At2g34420 photosystem II type I chlorophyll a/b binding protein 182 2e-47
At1g29910 chlorophyll a/b-binding protein 180 1e-46
At1g29920 chlorophyll a/b-binding protein 180 1e-46
At1g29930 unknown protein 180 1e-46
At3g27690 putative chlorophyll A-B binding protein 174 5e-45
At2g05070 putative chlorophyll a/b binding protein 172 2e-44
At2g05100 putative chlorophyll a/b binding protein 171 7e-44
At5g54270 Lhcb3 chlorophyll a/b binding protein (gb|AAD28773.1) 140 1e-34
At4g10340 chlorophyll a/b-binding protein - like 107 1e-24
At1g76570 putative chlorophyll A-B binding protein 91 1e-19
At1g61520 PSI type III chlorophyll a/b-binding protein 87 1e-18
At3g54890 chlorophyll a/b-binding protein 81 1e-16
At5g01530 chlorophyll a/b-binding protein CP29 78 7e-16
At1g45474 light-harvesting complex protein 78 9e-16
At3g08940 Lhcb4-protein (CP29, Lhcb4.2) 75 4e-15
At3g47470 light-harvesting chlorophyll a/b-binding protein (Cab4) 68 7e-13
At5g28450 PS I antenna protein Lhca2 fragment 65 6e-12
At3g61470 Lhca2 protein 65 6e-12
At2g40100 putative chlorophyll a/b binding protein 62 4e-11
>At2g34430 putative photosystem II type I chlorophyll a/b binding
protein.
Length = 266
Score = 182 bits (463), Expect = 2e-47
Identities = 90/99 (90%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIA-DGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
MGAVEGYR+A DGPLGE D LYPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 60 FFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FFVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
Score = 29.3 bits (64), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
+PG +D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 73 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 122
>At2g34420 photosystem II type I chlorophyll a/b binding protein
Length = 265
Score = 182 bits (463), Expect = 2e-47
Identities = 90/99 (90%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIA-DGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
MGAVEGYR+A DGPLGE D LYPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 167 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 60 FFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FFVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
Score = 29.3 bits (64), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
+PG +D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 72 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 121
>At1g29910 chlorophyll a/b-binding protein
Length = 267
Score = 180 bits (456), Expect = 1e-46
Identities = 88/99 (88%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIA-DGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
MGAVEGYR+A +GPLGE D LYPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FFVQAIVT KGP+ENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
Score = 29.3 bits (64), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
+PG +D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123
>At1g29920 chlorophyll a/b-binding protein
Length = 267
Score = 180 bits (456), Expect = 1e-46
Identities = 88/99 (88%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIA-DGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
MGAVEGYR+A +GPLGE D LYPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FFVQAIVT KGP+ENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
Score = 29.3 bits (64), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
+PG +D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123
>At1g29930 unknown protein
Length = 267
Score = 180 bits (456), Expect = 1e-46
Identities = 88/99 (88%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIA-DGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
MGAVEGYR+A +GPLGE D LYPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FFVQAIVT KGP+ENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
Score = 29.3 bits (64), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
+PG +D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNG 123
>At3g27690 putative chlorophyll A-B binding protein
Length = 266
Score = 174 bits (442), Expect = 5e-45
Identities = 82/98 (83%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MG +EGYRI GPLGE +DPLYPGG+FDPL LA+DPEAF+ELKVKELKNGRLAMFSMFGF
Sbjct: 169 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGP+ENL DHIADPV +NAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
Score = 32.3 bits (72), Expect = 0.041
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
YPG +D GL+ DPE FA+ + E+ + R AM G I+++ G
Sbjct: 74 YPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 123
>At2g05070 putative chlorophyll a/b binding protein
Length = 265
Score = 172 bits (437), Expect = 2e-44
Identities = 80/98 (81%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MG +EGYRI GPLGE +DPLYPGG+FDPL LA+DPEAF+ELKVKELKNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGP+ENL DH+ADPV +NAW++ATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
Score = 32.3 bits (72), Expect = 0.041
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
YPG +D GL+ DPE FA+ + E+ + R AM G I+++ G
Sbjct: 73 YPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 122
>At2g05100 putative chlorophyll a/b binding protein
Length = 265
Score = 171 bits (432), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MG +EGYRI GPLGE +DPLYPGG+FDPL LA+DPEAF+ELKVKELKNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPG 97
FVQAIVT KGP+ENL DH+ADPV +NAW++ATNFVPG
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPG 264
Score = 32.3 bits (72), Expect = 0.041
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
YPG +D GL+ DPE FA+ + E+ + R AM G I+++ G
Sbjct: 73 YPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 122
>At5g54270 Lhcb3 chlorophyll a/b binding protein (gb|AAD28773.1)
Length = 265
Score = 140 bits (353), Expect = 1e-34
Identities = 76/100 (76%), Positives = 82/100 (82%), Gaps = 5/100 (5%)
Query: 1 MGAVEGYRI--ADGPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSM 57
MG VEG+RI DG +GE D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSM
Sbjct: 167 MGLVEGFRINGLDG-VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 224
Query: 58 FGFFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPG 97
FGFFVQAIVT KGPLENL DH+ +PV +NAWAFAT F PG
Sbjct: 225 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
Score = 35.4 bits (80), Expect = 0.005
Identities = 18/39 (46%), Positives = 25/39 (63%), Gaps = 1/39 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 59
+PG +D GL+ DPEAFA+ + E+ +GR AM FG
Sbjct: 71 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFG 109
>At4g10340 chlorophyll a/b-binding protein - like
Length = 280
Score = 107 bits (267), Expect = 1e-24
Identities = 53/86 (61%), Positives = 65/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
+G E YRI +G + D L+PGG FDPLGLA DPE A LKVKE+KNGRLAMF+M GF
Sbjct: 182 LGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGF 239
Query: 61 FVQAIVTEKGPLENLADHIADPVNSN 86
F+QA VT +GP+ENLA H++DP +N
Sbjct: 240 FIQAYVTGEGPVENLAKHLSDPFGNN 265
Score = 35.0 bits (79), Expect = 0.006
Identities = 22/68 (32%), Positives = 30/68 (43%), Gaps = 6/68 (8%)
Query: 9 IADGPLGEVVDPLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 62
+ DG L P Y G +DP GL PE FA+ + EL + R AM GF +
Sbjct: 71 LPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFII 130
Query: 63 QAIVTEKG 70
+ + G
Sbjct: 131 PEALNKYG 138
>At1g76570 putative chlorophyll A-B binding protein
Length = 327
Score = 90.5 bits (223), Expect = 1e-19
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 13 PLGEVV--DPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEK 69
PLG + D YPGG+ FDPL L++DP AF +LKVKE+KNGRLAM + GF+ QA T K
Sbjct: 244 PLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGK 303
Query: 70 GPLENLADHIADPVNSN 86
GP++NL DH++DP+++N
Sbjct: 304 GPVQNLVDHVSDPLHNN 320
>At1g61520 PSI type III chlorophyll a/b-binding protein
Length = 273
Score = 87.4 bits (215), Expect = 1e-18
Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VT GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HIADPVNSN 86
H+ADPVN+N
Sbjct: 257 HLADPVNNN 265
>At3g54890 chlorophyll a/b-binding protein
Length = 241
Score = 80.9 bits (198), Expect = 1e-16
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTEKGPLENLADHIA 80
YPGG+FDPLG + DP+ ELKVKE+KNGRLA+ + GF V Q+ GPLENLA H+A
Sbjct: 167 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNSN 86
DP ++N
Sbjct: 227 DPWHNN 232
Score = 28.9 bits (63), Expect = 0.46
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 20 PLYPGGS------FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 62
P Y GS FDPLGL + P K EL + R AM ++ G V
Sbjct: 55 PAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILV 103
>At5g01530 chlorophyll a/b-binding protein CP29
Length = 290
Score = 78.2 bits (191), Expect = 7e-16
Identities = 38/66 (57%), Positives = 49/66 (73%), Gaps = 1/66 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHI 79
LYPGG F DPLGLA DPE A+L++ E+K+ RLAM + GF VQA T KGPL N A H+
Sbjct: 216 LYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNS 85
+DP+++
Sbjct: 276 SDPLHT 281
>At1g45474 light-harvesting complex protein
Length = 256
Score = 77.8 bits (190), Expect = 9e-16
Identities = 37/68 (54%), Positives = 51/68 (74%), Gaps = 1/68 (1%)
Query: 16 EVVDPLYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLEN 74
E ++P YPGG +PLGLA D + + K+KE+KNGRLAM +M GFFVQA VT GP++N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 75 LADHIADP 82
L +H+++P
Sbjct: 235 LVEHLSNP 242
Score = 32.7 bits (73), Expect = 0.032
Identities = 16/44 (36%), Positives = 22/44 (49%)
Query: 27 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
FDPLGL +DPE+ EL + R AM + G ++ G
Sbjct: 69 FDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTG 112
>At3g08940 Lhcb4-protein (CP29, Lhcb4.2)
Length = 287
Score = 75.5 bits (184), Expect = 4e-15
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHI 79
LYPGG F DPLGLA DP A+L++ E+K+ RLAM GF VQA T KGPL N A H+
Sbjct: 213 LYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 272
Query: 80 ADPVNS 85
+DP+++
Sbjct: 273 SDPLHT 278
>At3g47470 light-harvesting chlorophyll a/b-binding protein (Cab4)
Length = 251
Score = 68.2 bits (165), Expect = 7e-13
Identities = 39/70 (55%), Positives = 43/70 (60%), Gaps = 7/70 (10%)
Query: 13 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPL 72
P GEV YPGG F+PL A EA K KEL NGRLAM + GF VQ VT KGP
Sbjct: 179 PKGEVG---YPGGIFNPLNFAPTQEA----KEKELANGRLAMLAFLGFVVQHNVTGKGPF 231
Query: 73 ENLADHIADP 82
ENL H++DP
Sbjct: 232 ENLLQHLSDP 241
Score = 40.0 bits (92), Expect = 2e-04
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 27 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKG 70
FDPLGLA+DPE EL NGR AM + G + + T+ G
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
>At5g28450 PS I antenna protein Lhca2 fragment
Length = 101
Score = 65.1 bits (157), Expect = 6e-12
Identities = 35/73 (47%), Positives = 46/73 (62%), Gaps = 2/73 (2%)
Query: 22 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHI 79
YPGG FDPLG P EL+ KE+KNGRLAM ++ G + Q I T GP++NL H+
Sbjct: 27 YPGGLWFDPLGWGSGSPTKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 86
Query: 80 ADPVNSNAWAFAT 92
ADP ++ +A T
Sbjct: 87 ADPGHATIFAAFT 99
>At3g61470 Lhca2 protein
Length = 257
Score = 65.1 bits (157), Expect = 6e-12
Identities = 35/73 (47%), Positives = 46/73 (62%), Gaps = 2/73 (2%)
Query: 22 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHI 79
YPGG FDPLG P EL+ KE+KNGRLAM ++ G + Q I T GP++NL H+
Sbjct: 183 YPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 242
Query: 80 ADPVNSNAWAFAT 92
ADP ++ +A T
Sbjct: 243 ADPGHATIFAAFT 255
Score = 34.7 bits (78), Expect = 0.008
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 16 EVVDPLYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPL 72
E +D PG FDPLGL+ DP++ E+ + R AM G F+ +T+ G L
Sbjct: 63 EWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGIL 120
>At2g40100 putative chlorophyll a/b binding protein
Length = 276
Score = 62.4 bits (150), Expect = 4e-11
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 21 LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLA 76
+YPGG FDPLGLA DPE LK+ E+K+ RLAM + F +QA T KGP+ LA
Sbjct: 217 IYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLA 272
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,332,622
Number of Sequences: 26719
Number of extensions: 85759
Number of successful extensions: 214
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 161
Number of HSP's gapped (non-prelim): 50
length of query: 98
length of database: 11,318,596
effective HSP length: 74
effective length of query: 24
effective length of database: 9,341,390
effective search space: 224193360
effective search space used: 224193360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)
Medicago: description of AC139600.2