BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139343.3 + phase: 0 /pseudo
         (216 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g17770 dihydroxyacetone kinase like protein                        285  2e-77
At1g48430 dihydroxyacetone kinase like protein                        280  4e-76
At1g56000 hypothetical protein                                         27  6.3
At5g37830 5-oxoprolinase -like protein                                 27  8.2

>At3g17770 dihydroxyacetone kinase like protein
          Length = 595

 Score =  285 bits (728), Expect = 2e-77
 Identities = 145/178 (81%), Positives = 157/178 (87%), Gaps = 1/178 (0%)

Query: 1   METYPSLQYLDGYPNVKVVFRKDVYPGPPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAI 60
           +ETYP LQYLDG+P VKVV R DV     YDKVA+ISGGGSGHEPAHAG+VGEGMLTAAI
Sbjct: 24  VETYPGLQYLDGFPEVKVVLRADV-SAAKYDKVAVISGGGSGHEPAHAGYVGEGMLTAAI 82

Query: 61  CGDVFASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKVESVIVA 120
           CGDVFASP V++ILAGIRAVTG  GCLLIVKNYTGDRLNFG AAEQAKSEGYKVE+VIV 
Sbjct: 83  CGDVFASPPVDSILAGIRAVTGTEGCLLIVKNYTGDRLNFGLAAEQAKSEGYKVETVIVG 142

Query: 121 DDCAIPPPLEMVGRRGLAGTILVHKVAGAAAAAGLSLADVAAEARYASENVGTMGVAL 178
           +DCA+PPP  + GRRGLAGT+LVHKVAGAAAAAGLSL  VAAEA+ ASE VGTMGVAL
Sbjct: 143 EDCALPPPRGIAGRRGLAGTVLVHKVAGAAAAAGLSLEKVAAEAKCASEMVGTMGVAL 200


>At1g48430 dihydroxyacetone kinase like protein
          Length = 593

 Score =  280 bits (716), Expect = 4e-76
 Identities = 140/178 (78%), Positives = 157/178 (87%), Gaps = 1/178 (0%)

Query: 1   METYPSLQYLDGYPNVKVVFRKDVYPGPPYDKVAIISGGGSGHEPAHAGFVGEGMLTAAI 60
           +ETYP LQYLDG P +KVV R DV     YDKVA+ISGGGSGHEPA AG+VGEGMLTAAI
Sbjct: 24  VETYPGLQYLDGLPEIKVVLRADV-SAANYDKVAVISGGGSGHEPAQAGYVGEGMLTAAI 82

Query: 61  CGDVFASPTVEAILAGIRAVTGPMGCLLIVKNYTGDRLNFGSAAEQAKSEGYKVESVIVA 120
           CGDVFASPTV++ILA IRAVTGP GCLL+V NYTGDRLNFG AAEQAK+EG+ +E+VIV 
Sbjct: 83  CGDVFASPTVDSILARIRAVTGPKGCLLVVTNYTGDRLNFGLAAEQAKTEGFDIETVIVG 142

Query: 121 DDCAIPPPLEMVGRRGLAGTILVHKVAGAAAAAGLSLADVAAEARYASENVGTMGVAL 178
           DDCA+PPP  + GRRGLAGT+LVHKVAGAAAAAGLSLA+VAAEA++ASE VGTMGVAL
Sbjct: 143 DDCALPPPRGVAGRRGLAGTVLVHKVAGAAAAAGLSLAEVAAEAKHASEMVGTMGVAL 200


>At1g56000 hypothetical protein
          Length = 416

 Score = 27.3 bits (59), Expect = 6.3
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)

Query: 59  AICGDVFASPTVE-AILAGIRAVT 81
           AICGD   SP VE AIL+G+ A +
Sbjct: 384 AICGDFCVSPNVEGAILSGLAAAS 407


>At5g37830 5-oxoprolinase -like protein
          Length = 1266

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 141 ILVHKVAGAAAAAGLSLADVAAEAR 165
           +LVH+  G  +A G+ LADV  +A+
Sbjct: 512 VLVHRYCGILSAYGMGLADVIEDAQ 536


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,972,902
Number of Sequences: 26719
Number of extensions: 152910
Number of successful extensions: 359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 4
length of query: 216
length of database: 11,318,596
effective HSP length: 95
effective length of query: 121
effective length of database: 8,780,291
effective search space: 1062415211
effective search space used: 1062415211
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)