BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138464.11 - phase: 0
(292 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40800 putative protein 179 2e-45
At3g27250 hypothetical protein 175 3e-44
At5g40790 putative protein 140 8e-34
At5g50360 unknown protein 126 2e-29
At3g48510 unknown protein 120 9e-28
At5g63350 unknown protein (At5g63350) 117 6e-27
At5g22080 unknown protein 30 1.2
At5g13980 alpha-mannosidase 30 2.0
At2g31660 importin (nuclear transport factor ) like protein 29 2.6
At5g13860 unknown protein 29 3.4
At3g54280 TATA box binding protein (TBP) associated factor (TAF)... 29 3.4
At5g14440 putative protein 28 4.5
At3g23650 hypothetical protein 28 4.5
At2g14430 putative non-LTR retroelement reverse transcriptase 28 4.5
At3g57400 unknown protein 28 5.8
At2g37570 unknown protein 28 5.8
At2g35880 unknown protein 28 5.8
At1g55480 unknown protein 28 5.8
At1g11420 hypothetical protein 28 5.8
At3g06920 hypothetical protein 28 7.6
>At5g40800 putative protein
Length = 272
Score = 179 bits (453), Expect = 2e-45
Identities = 116/301 (38%), Positives = 168/301 (55%), Gaps = 38/301 (12%)
Query: 1 MESEH-VWRVGACNRNPSLNNDNNIFNGIMLRFRPIAPKPVT-GEQTPANQSTTASLPGK 58
M+ +H +WR C D + +ML++RPIAPKP T G+ + S+T +
Sbjct: 1 MDQDHELWRTLRCAGKAQ---DKTSVDTLMLKYRPIAPKPTTTGQPLVGDTSST-----R 52
Query: 59 RTKRKYVRIRRNNGYIKKNSCKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAAT 118
RTKRKYVR+ +NN K +C+ + S+S D +VTLQL+PE++
Sbjct: 53 RTKRKYVRVSKNN----KATCRSKTNGFR-----SSSTDPENGREDIVTLQLLPERSTPL 103
Query: 119 SNVDLNLNLNLTVENIQILDNLNRSQNNPDLETMNAGKFLDLLPAVEKAVVESWITVESV 178
S +D N NL+ TVE I N + + N N G A+++ VE+W+TVESV
Sbjct: 104 S-LDHN-NLDPTVETI----NGDETCNTDTWLKFNGGD-----DALQQVPVETWVTVESV 152
Query: 179 TGMCMV-------VEKVKNIETDTCPCFITDGNGKVLRVNDAYKKMVVNEESEEVEVVIW 231
+ E ++ DTCP FI+DG+ +V+ VN+AY+++V + EV++W
Sbjct: 153 NSGLVSHAVGLTDEELTYALDKDTCPGFISDGSNRVVMVNEAYRRIVTGDGGFGREVIVW 212
Query: 232 LKVKQSVAWCYSYPAFTCGVRLQYTWRNEKCLKMVPCDVWRLECGGFAWRLDVKAALSLG 291
L V Q+ +C Y FTC VR++YTWR K K +PCDVW++E GGFAWRLD AAL+L
Sbjct: 213 LVVDQTATFC-DYRTFTCKVRMEYTWRETKYTKTLPCDVWKMEFGGFAWRLDTTAALTLW 271
Query: 292 L 292
L
Sbjct: 272 L 272
>At3g27250 hypothetical protein
Length = 282
Score = 175 bits (443), Expect = 3e-44
Identities = 110/284 (38%), Positives = 159/284 (55%), Gaps = 41/284 (14%)
Query: 26 NGIMLRFRPIAPKPVTGEQTPANQSTTASLPG--KRTKRKYVRIRRNNGYIKKNSCKKSS 83
+ +MLR+RPIAPKP TG+ + S G KRTKRKYVR+ +NN K +C+ S
Sbjct: 23 DALMLRYRPIAPKPTTGQPCGVADNNNNSSYGMSKRTKRKYVRVSKNN----KGTCRGKS 78
Query: 84 PEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSNVDLNLNLNLTVENIQILDNLNRS 143
S+ +D+ ++ VVTLQL+PEK+ + ++ + ++
Sbjct: 79 --------RSDLSDDREQT-DVVTLQLLPEKSDISGEYS-------PLDQDSLDPSVKSI 122
Query: 144 QNNPDLETMNAGKFLDLLPAVEKAVVESWITVESVTGMC-----------MVVEKVKNIE 192
ET G F + A +E+W+TVESVT +C VE V N+
Sbjct: 123 IGEETQETNTWGMFNGSVTAE----METWVTVESVTSVCEGSLSSHAVGITDVEIVDNLG 178
Query: 193 TDTCPCFITDGNGKVLRVNDAYKKMVVNEESE---EVEVVIWLKVKQSVAWCY-SYPAFT 248
DTCP F++DG+ +V+ VN+AY++ V ++S EVV+WL +++ A + +Y AFT
Sbjct: 179 KDTCPAFVSDGSNRVVWVNEAYRRNVSGDDSTASVSPEVVVWLVAEEATAAMHCNYQAFT 238
Query: 249 CGVRLQYTWRNEKCLKMVPCDVWRLECGGFAWRLDVKAALSLGL 292
C VR+QYTW+ K K VPCDVW++E GGFAWRLD AAL+L L
Sbjct: 239 CRVRMQYTWKETKYTKTVPCDVWKMEFGGFAWRLDTTAALTLWL 282
>At5g40790 putative protein
Length = 303
Score = 140 bits (353), Expect = 8e-34
Identities = 101/307 (32%), Positives = 158/307 (50%), Gaps = 54/307 (17%)
Query: 19 NNDNNIFNGIMLRFRPIAPKPVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNS 78
+ D + + IM RFRPIAPKP GE + S +R+KRKYVR+R KKNS
Sbjct: 18 DQDKTVISKIMQRFRPIAPKPAVGESSDDTNSDRFLGRNRRSKRKYVRVRD-----KKNS 72
Query: 79 CKKSSPEEEIVVQHSNSNDEMKRNLA----------VVTLQLMPEKAAATSNVDLNLNLN 128
++ ++ ++ +K +L +VTLQL+PEK + D+ N +
Sbjct: 73 SGSNNKKDITGKKNGCDRGNIKTDLDKKIDGDDRTDIVTLQLLPEK-----DRDIGNNGD 127
Query: 129 LTVENIQILDNLNRSQNNPDLETMNAGKFLDLLPAVEKAVVESWITVESVTGMCM----- 183
E L +++ P N+ + L + ++ VVESW+TVE V+ C
Sbjct: 128 KAGEFCSDLSDMD-----PKKSLYNS--IIGLSSSFDRKVVESWLTVECVSDTCTDLGWY 180
Query: 184 -VVEKV-----------KNIETDTCPCFITDGNGKVLRVNDAYKKMVVNEESEEVEV--V 229
++E++ + +E DTCP ++DG+ +V VN AY++M+ + + + V V
Sbjct: 181 HILEQLGRMDQAEERVMRMLEVDTCPWLVSDGSNRVCWVNRAYRRMMGAPDVDVIRVWLV 240
Query: 230 IWLKVKQSVAWCYS-YPAFTCGVRLQY---TWRNEKCLKMVPCDVWRLECGGFAWRLDVK 285
+ + + + +A Y A TC VR++Y TWR VPCDVWR+ GGFAWRLDV+
Sbjct: 241 VAMDLMEEIACMVELYGAVTCRVRVRYEPSTWRK----MTVPCDVWRIRSGGFAWRLDVE 296
Query: 286 AALSLGL 292
+AL LG+
Sbjct: 297 SALRLGM 303
>At5g50360 unknown protein
Length = 291
Score = 126 bits (316), Expect = 2e-29
Identities = 100/294 (34%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 20 NDNNIFNGIMLRFRPIAPKPVTG----EQTPANQS--TTASLPGKRTKRKYVRIRRNNGY 73
ND + + IMLR+RPIAP+P +G T N S T S +R KRKY + ++
Sbjct: 19 NDMSKVDRIMLRYRPIAPRPDSGGSPASPTEKNGSVITNVSSRSRRGKRKYSKENNSSST 78
Query: 74 IKKNSCKKSSPEEEIVVQHSNSNDEMKRNLA----VVTLQLMPEKAAAT-SNVDLNLNLN 128
NS S + NDE K +VTL L+PE S +
Sbjct: 79 GSVNSNGNSKRQR---------NDETKNGSGGGREIVTLPLLPETPEKKDSPLKAKAAPE 129
Query: 129 LTVENIQILDNLNRSQNNPDLETMNAGKFLDLLPAVEKAVVESWITVESVTGM------- 181
L + + N S N + + + VV S +TVE VT
Sbjct: 130 LGAAALWLSFNDGASYNRRYQTEL-----------MTETVVSSLLTVECVTERLMEGEYE 178
Query: 182 --CMVVEKVKNIETDTCPCFITDGNGKVLRVNDAYKKMVVNEESEEV-EVVIWLKVKQSV 238
C E+ N+E DTCP FI+DG G+V+ N +Y+++VV ++ E+ ++ +WL +K+
Sbjct: 179 LGCTDEERKMNLERDTCPGFISDGLGRVIWTNGSYRELVVGKDHEQCSKMSVWLVMKEKP 238
Query: 239 AWCYSYPAFTCGVRLQYTWRNEKCLKMVP-CDVWRLECGGFAWRLDVKAALSLG 291
+Y FTC +RLQYT R+++ + CDVWR+ GGFAWRLDV AAL LG
Sbjct: 239 --LVTYRTFTCRMRLQYTCRDKEVSSITSFCDVWRMSDGGFAWRLDVDAALCLG 290
>At3g48510 unknown protein
Length = 294
Score = 120 bits (301), Expect = 9e-28
Identities = 103/299 (34%), Positives = 145/299 (48%), Gaps = 67/299 (22%)
Query: 28 IMLRFRPIAPKP--------VTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNSC 79
IMLRFRPIAPKP V+ + S + R KRK +++ N G K+ +
Sbjct: 27 IMLRFRPIAPKPASPGGVNPVSSGDSGGGSSDVSFRSASRRKRKCHQLKENGGNAKRCTR 86
Query: 80 KKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSNVDLNLNLNLTVENIQILDN 139
+K+S + V H ++N VTL L+PEK ++L VE
Sbjct: 87 RKTSDKP---VVHGSAN--------AVTLSLLPEKP---------IDLKAAVEK------ 120
Query: 140 LNRSQNNPDLETMNAGKFLDLLPAVEK-------AVVESWITVESVTGMCMV-------- 184
+ Q L + G L PA + V+ S +TVE VT +
Sbjct: 121 -QKRQGPLWLSFKDGGGMLT--PAYQTPEIVQRTVVISSCMTVERVTDAWIDGYGLGRSD 177
Query: 185 VEKVKNIETDTCPCFITDGNGKVLRVNDAYKKMV-----VNEESEEV------EVVIWLK 233
E+ N+ DTCP FI+DG+G+V NDAY+KM V E + E+ V++ L
Sbjct: 178 EERKMNLVRDTCPGFISDGSGRVTWTNDAYRKMARDIIPVEEGAPEITSGDSFHVIVRLV 237
Query: 234 VKQSVAWCYSYPAFTCGVRLQYTWRN-EKCLKMVPCDVWRLEC-GGFAWRLDVKAALSL 290
+++ + P FTC ++LQYT +N E+ VPCDVWR++ GGFAWRLDVKAAL L
Sbjct: 238 MRERP--MLTSPGFTCRMKLQYTCQNRERGSVTVPCDVWRMDVGGGFAWRLDVKAALCL 294
>At5g63350 unknown protein (At5g63350)
Length = 302
Score = 117 bits (294), Expect = 6e-27
Identities = 108/306 (35%), Positives = 141/306 (45%), Gaps = 73/306 (23%)
Query: 28 IMLRFRPIAPKP--------VTGEQ--TPANQSTTASLPGK--RTKRKYVRIRRNNGYIK 75
IMLRFRPIAPKP +TG+ T ++ L GK R KRKY + +
Sbjct: 27 IMLRFRPIAPKPASDGGSVSLTGKSGSTTTTSGGSSDLSGKSGRGKRKYQKDCSGGNSRR 86
Query: 76 KNSCKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSNVDLNLNLNLTVENIQ 135
N K+ + VTL L+PE DLN VE
Sbjct: 87 CNKKKRDLSGDTATT-------------TAVTLSLLPETPEKRVFPDLNA---FPVEK-- 128
Query: 136 ILDNLNRSQNNPDLETMNAGKFLDLLPAVEKA-------VVESWITVESVTGMCMV---- 184
+ +N P + N G ++L + A VV S +TVE VT +
Sbjct: 129 ------QKRNGPLWLSFNGGG--EILTPYKTAEISRRTVVVSSCVTVERVTDAWIDGYGL 180
Query: 185 ----VEKVKNIETDTCPCFITDGNGKVLRVNDAYKKMV---VNEESEE------------ 225
E+ N+ DTCP FI+DG G+V N+AYKKM +N EE
Sbjct: 181 GETNQERKMNLVEDTCPGFISDGVGRVTWTNEAYKKMAREDINIPMEEGVPEDISYDNFH 240
Query: 226 VEVVIWLKVKQSVAWCYSYPAFTCGVRLQYTWRN-EKCLKMVPCDVWRLECGGFAWRLDV 284
V V + +K + + +YPAFTC VRLQYT ++ E+ VPCDVWR++ GGFAWRLDV
Sbjct: 241 VNVRLVMKERPML----TYPAFTCRVRLQYTCQDRERGSVTVPCDVWRMDGGGFAWRLDV 296
Query: 285 KAALSL 290
KAAL L
Sbjct: 297 KAALCL 302
>At5g22080 unknown protein
Length = 246
Score = 30.4 bits (67), Expect = 1.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 67 IRRNNGYIKKNSCKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEK 114
+ R+N + SC K +P E + + +S D++KR ++L + P+K
Sbjct: 22 VERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMVHPDK 69
>At5g13980 alpha-mannosidase
Length = 1024
Score = 29.6 bits (65), Expect = 2.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 188 VKNIETDTCPCFITDGNGKVLRVNDAYKKMVVNEESEEVEVVI 230
V+N+ P + D N K + V A+ + NE+SEE++ ++
Sbjct: 71 VQNVLDSIVPALLADKNRKFIYVEQAFFQRWWNEQSEEIKRIV 113
>At2g31660 importin (nuclear transport factor ) like protein
Length = 1040
Score = 29.3 bits (64), Expect = 2.6
Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 1/76 (1%)
Query: 21 DNNIFNGIMLRFRPIAPKPVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNSCK 80
D N+FN M+ F ++ +PV E P + S + K+ V I N Y + K
Sbjct: 222 DLNVFNAWMVLFLSVSERPVPVEGQPMDPELRKSWGWWKVKKWTVHI-LNRLYSRFGDPK 280
Query: 81 KSSPEEEIVVQHSNSN 96
SPE + Q N
Sbjct: 281 LQSPENKPFAQMFQKN 296
>At5g13860 unknown protein
Length = 368
Score = 28.9 bits (63), Expect = 3.4
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 79 CKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSN-VDLNLNLNLTVENIQIL 137
C +P +++++ +SN +V+L + +SN VDL +L+ L
Sbjct: 102 CVYVNPTRDMIIKRPHSNVSPS---GLVSLPYLQNWIYPSSNLVDLASHLSAAFSRDPPL 158
Query: 138 DNLNRSQNNPDLETMNAGKFLDLLPAVEKAVVESWIT------VESVTGMCMVVEKVKNI 191
+ R P ++ +G L P E + VE V G +++ + +
Sbjct: 159 YSQRRPPPQPS-PSIGSGYSRPLPPRQTDDAAEVYKKNAINRIVEMVHGDIVLMRSAREV 217
Query: 192 ETDTCPCFITDGNGKVLRVNDAYKKMVVNEESEEVEVVI 230
ET+ +D + +N+ +K+MV+ +E+ E ++ +
Sbjct: 218 ETEGLLSLQSDLKRREEEINNGFKEMVIEKETLEQQLQV 256
>At3g54280 TATA box binding protein (TBP) associated factor (TAF)
-like protein
Length = 2049
Score = 28.9 bits (63), Expect = 3.4
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 97 DEMKRNLAVVTLQLMPEKAAATSNVDLNLNLNLTVENIQILDNLNRSQNNPDLETMNAGK 156
D++ + +T L+PE + +DL + ++ + Q++ ++ P +E +
Sbjct: 1231 DKLPKLWECLTEVLVPEIPSDQQKIDLKIE---SISDPQVVRSIA-----PVMEETLKPR 1282
Query: 157 FLDLLPAVEKAVVESWITVESVTGMCMVVEKVKNIETD 194
L LLP + K V S + V C V+ K++ TD
Sbjct: 1283 LLSLLPCIFKCVRHSHVAVRLAASRC-VMTMAKSMTTD 1319
>At5g14440 putative protein
Length = 291
Score = 28.5 bits (62), Expect = 4.5
Identities = 16/60 (26%), Positives = 29/60 (47%), Gaps = 5/60 (8%)
Query: 39 PVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNSCKKSSPEEEIVVQHSNSNDE 98
P G +TPA ++ K+ K+K + ++N K S +K E++ + + NDE
Sbjct: 125 PAEGGETPAKENGVEDEDKKKKKKKNNKKKKN-----KKSVEKKKNGEDVADEIEHENDE 179
>At3g23650 hypothetical protein
Length = 134
Score = 28.5 bits (62), Expect = 4.5
Identities = 27/85 (31%), Positives = 43/85 (49%), Gaps = 20/85 (23%)
Query: 166 KAVVESWITVESVTGMC--------MVVEKVKNIETDTCPCFITDGNGKVLRVNDAYKKM 217
K V+E +VE++T + +++ K+++ C CF D NG D KK
Sbjct: 12 KLVLEGVDSVETLTMVGTFNYILIHIMLVSFKSVKKSRCICFRGDSNGV-----DHMKK- 65
Query: 218 VVNEES---EEVEVVIWL--KVKQS 237
VN+E+ EE +V+WL K+K S
Sbjct: 66 -VNDETLSVEEQNLVMWLCPKIKDS 89
>At2g14430 putative non-LTR retroelement reverse transcriptase
Length = 1277
Score = 28.5 bits (62), Expect = 4.5
Identities = 15/86 (17%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 63 KYVRIRRNNGYIKKNSCKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSNVD 122
K ++ R + ++ ++ PE E+V + S +++++ +V+ L+ ++ T+ +
Sbjct: 109 KTIKFRIRDSAVRSRVLRRVEPETEVVTEVIPSQQDLQKDPLLVSNLLVNQREVETNGTE 168
Query: 123 LNLNLNLT--VENIQILDNLNRSQNN 146
N T EN ++ + + Q++
Sbjct: 169 KNSEAETTELKENENVIAVIEKEQDD 194
>At3g57400 unknown protein
Length = 474
Score = 28.1 bits (61), Expect = 5.8
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 74 IKKNSCKKSSPEEEIVVQHSNSNDEMKRNLAVVTLQLMPEKAAATSNVDLNLNLNLTVEN 133
I++ KK+S E +V+ N M +N VVT + + +A++ + + N +
Sbjct: 375 IQQQHKKKNSVTESVVLSQLVGNVHMTKNFEVVTSESVVPEASSLAELRTR---NSAASS 431
Query: 134 IQILDNLNRSQNNPDLETMNAGKFLDLLPAVEKAV 168
I+ D + R N N+ +D++ + K +
Sbjct: 432 IKNHDIIQRGGGN-----SNSNHIIDIMAIIMKRI 461
>At2g37570 unknown protein
Length = 494
Score = 28.1 bits (61), Expect = 5.8
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 14 RNPSLNNDNNIFNGIMLRFRPIAPKPVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGY 73
+NP+ N+ + NG L T +N T P KRK + +NG
Sbjct: 270 KNPTANHSKKLLNGSGLNLS-------TQPSNHSNGEATDLSPSSHKKRKDL---FSNGI 319
Query: 74 IKKNSCKKSSPEEEIVVQHSN 94
++ C +P+ ++ H N
Sbjct: 320 HEEECCLTVNPQPPVIEAHQN 340
>At2g35880 unknown protein
Length = 432
Score = 28.1 bits (61), Expect = 5.8
Identities = 18/71 (25%), Positives = 27/71 (37%), Gaps = 7/71 (9%)
Query: 34 PIAPKPVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNSCKKSSPEEEIVV--- 90
P KP + + T S P T+ K V+ + +KK +K EE+
Sbjct: 346 PRVTKPKDSSSSTVKKPITKSQPKLETQEKSVKAKEKKKKVKKEEAEKRGEEEKATAVAA 405
Query: 91 ----QHSNSND 97
Q NSN+
Sbjct: 406 KPEEQKPNSNN 416
>At1g55480 unknown protein
Length = 335
Score = 28.1 bits (61), Expect = 5.8
Identities = 30/132 (22%), Positives = 60/132 (44%), Gaps = 27/132 (20%)
Query: 57 GKRTKRKYVRIRRNNGYIK------------KNSCKKSSPEEEI-----VVQHSNSNDEM 99
G+ T+++ +R RN GYI K +K+ E+++ ++ + +
Sbjct: 178 GELTEKEIIRAERNAGYISSRLREIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEAL 237
Query: 100 KRNLAVVTLQLMPEKAAATS-NV--------DLNLNLNLTVENIQI-LDNLNRSQNNPDL 149
+R +V+ + PE+A+ S NV + L+ E ++ ++ R +++PDL
Sbjct: 238 ERFESVLGSKPTPEEASVASYNVACCYSKLNQVQAGLSALEEALKSGYEDFKRIRSDPDL 297
Query: 150 ETMNAGKFLDLL 161
ET+ K D L
Sbjct: 298 ETLRKSKDFDPL 309
>At1g11420 hypothetical protein
Length = 604
Score = 28.1 bits (61), Expect = 5.8
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 39 PVTGEQTPANQSTTASLPGKRTKRKYVRIRRNNGYIKKNS----CKKSSPEEEIVVQHSN 94
PV + N+ST +P + K KY +R G +K NS SS VV++S
Sbjct: 333 PVPMKNGFGNESTREKMP-EEPKIKYYTRKRKRGGLKLNSYINKTVLSSDRTPNVVKNSA 391
Query: 95 SNDEMKRNLAVVTLQLMP 112
SN E N A T+ ++P
Sbjct: 392 SNAE--ENHAKHTIMVLP 407
>At3g06920 hypothetical protein
Length = 871
Score = 27.7 bits (60), Expect = 7.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 198 CFITDGNGKVLRVNDAYK 215
C + DG GKV RV+DAYK
Sbjct: 451 CSLIDGLGKVGRVDDAYK 468
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.317 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,734,853
Number of Sequences: 26719
Number of extensions: 280199
Number of successful extensions: 871
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 823
Number of HSP's gapped (non-prelim): 34
length of query: 292
length of database: 11,318,596
effective HSP length: 98
effective length of query: 194
effective length of database: 8,700,134
effective search space: 1687825996
effective search space used: 1687825996
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC138464.11