BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138453.14 - phase: 0
(1715 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 744 0.0
At1g48710 hypothetical protein 742 0.0
At3g60170 putative protein 707 0.0
At2g15650 putative retroelement pol polyprotein 699 0.0
At3g25450 hypothetical protein 650 0.0
At1g32590 hypothetical protein, 5' partial 644 0.0
At2g20460 putative retroelement pol polyprotein 604 e-172
At3g59720 copia-type reverse transcriptase-like protein 597 e-170
At2g05390 putative retroelement pol polyprotein 590 e-168
At2g16000 putative retroelement pol polyprotein 589 e-168
At1g31210 putative reverse transcriptase 582 e-166
At1g70010 hypothetical protein 567 e-161
At1g37110 550 e-156
At3g45520 copia-like polyprotein 548 e-155
At2g07550 putative retroelement pol polyprotein 546 e-155
At2g13930 putative retroelement pol polyprotein 535 e-151
At1g26990 polyprotein, putative 534 e-151
At2g21460 putative retroelement pol polyprotein 529 e-150
At5g35820 copia-like retrotransposable element 528 e-149
At2g16670 putative retroelement pol polyprotein 520 e-147
>At3g61330 copia-type polyprotein
Length = 1352
Score = 744 bits (1922), Expect = 0.0
Identities = 407/1092 (37%), Positives = 610/1092 (55%), Gaps = 59/1092 (5%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K + KA EK ++ + + +++ WYLDSG
Sbjct: 293 ECKAPSNKKFEEKAHYVEEKI-----------QEEDMLLMASYKKDEQKENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +++ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C GK K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQNGVVERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+P +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK YK+YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E + E S E P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDEPEPTR--------EEPPSEEPTTPPTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL +++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
++A+ W AM EE+ Q+ND W+L P+ IG KWV++ K N +GEV R KA
Sbjct: 841 FQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEV 1330
RLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDV+SAFLNG +EEEV
Sbjct: 901 RLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRT 1390
Y++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF + + L+ +
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVY 1450
K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LGI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTR 1140
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAG 1570
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+G+ D+D+ G
Sbjct: 1141 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGG 1200
Query: 1571 DRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
D +RKSTS ++G+ +W SK+Q + +ST EAEY++A SC +W+++ L++
Sbjct: 1201 DVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELS 1260
Query: 1631 I-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWA 1689
+ I+ DN +AI L+KNP+ H R+KHI+ ++H+IR+ V K + ++++ T Q A
Sbjct: 1261 LPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1690 DIFTKPLSVERF 1701
D FTKPL E F
Sbjct: 1321 DFFTKPLKRENF 1332
Score = 81.3 bits (199), Expect = 5e-15
Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSIA---LPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIA 280
+ +E E KK + IA L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKS 339
+ + KG K+ + C+NC K GH+ ++C +KF+ K+
Sbjct: 249 PHEDNTNQRGENSSRGRG-KGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKA 306
>At1g48710 hypothetical protein
Length = 1352
Score = 742 bits (1915), Expect = 0.0
Identities = 409/1096 (37%), Positives = 612/1096 (55%), Gaps = 61/1096 (5%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K + KA EK ++ + + +E+ WYLDSG
Sbjct: 293 ECKAPSNKKFEEKANYVEEKI-----------QEEDMLLMASYKKDEQEENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +++ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C GK K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ + LEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQNGV ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+ +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK YK+YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E + E S E P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDEPEPTR--------EEPPSEEPTTPPTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL +++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
+EA+ W AM EE+ Q+ND W+L P+ IG KWV++ K N +GEV R KA
Sbjct: 841 FQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEV 1330
RLVA+GY Q+ GIDY E FAPVARLE +RL++S A + ++QMDV+SAFLNG +EEEV
Sbjct: 901 RLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRT 1390
Y++QP G+ D V +LKK+LYGLKQAPRAW R+ + + DF + + L+ +
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVY 1450
K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LGI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTR 1140
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAG 1570
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+G+ D+D+ G
Sbjct: 1141 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGG 1200
Query: 1571 DRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
D +RKSTS ++G+ +W SK+Q + +ST EAEY++A SC +W+++ L++
Sbjct: 1201 DVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELS 1260
Query: 1631 I-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWA 1689
+ I+ DN +AI L+KNP+ H R+KHI+ ++H+IR+ V K + ++++ T Q A
Sbjct: 1261 LPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1690 DIFTKPLSVERFDFIK 1705
DIFTKPL +R DFIK
Sbjct: 1321 DIFTKPL--KREDFIK 1334
Score = 80.5 bits (197), Expect = 8e-15
Identities = 71/327 (21%), Positives = 148/327 (44%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + KG K+ + C+NC K GH+ ++C +KF+ +
Sbjct: 249 PHEDNTNQRGENSSRGRG-KGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFE---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At3g60170 putative protein
Length = 1339
Score = 707 bits (1826), Expect = 0.0
Identities = 400/1087 (36%), Positives = 616/1087 (55%), Gaps = 44/1087 (4%)
Query: 647 LNDQKPLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTG 706
L +++ L + V + W+LDSGCS HMTG K F L VK G +
Sbjct: 277 LEEEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRM 336
Query: 707 KIIGTGTI-----GNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDD 761
++G G++ G + + I V+ V L++NLLS+ Q + G + C + +
Sbjct: 337 SVVGKGSVKVKVNGVTQV-IPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSK 395
Query: 762 KSITFKGKRVENVYKINFSDLADQKVVCLLS---MNDKKWVWHKRLGHANWRLISKISKL 818
+I ++ + + + +CL + M+ + +WH R GH N + ++
Sbjct: 396 GAIMETNMSGNRMFFL-LASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHK 454
Query: 819 QLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYG 878
++V GLP + + +C C GK + S K +S L+L+H D+ GP+ S G
Sbjct: 455 KMVIGLPILKATKE-ICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSG 513
Query: 879 SKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEP 938
+Y L +DD++R TWV F+ K A F F ++ E + +R+D GGEF +
Sbjct: 514 KRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNE 573
Query: 939 FELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCY 998
F FC HGI + ++ TPQQNGV ERKNRT+ R+M+ E + K FW+EA S +
Sbjct: 574 FGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVH 633
Query: 999 IQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGY 1058
IQNR + T E + GR+P + YF FGC Y+ K D K+++ +FLG
Sbjct: 634 IQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGV 693
Query: 1059 SERSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSK 1118
SE SKA+++Y+ + + S V FD E S +Q++ A E E D+ +
Sbjct: 694 SEESKAWRLYDPVMKKIVISKDVVFD--EDKSWDWDQADVEAKEVTLECGDEDDEKNSEV 751
Query: 1119 KYTEVESSPEAEITPEAESNSEA-EPSSKVQNEIASEDFLDNTQQVIQPKFK--HKSSHP 1175
+SP + S+S PSS + +A++ T++ P + +++
Sbjct: 752 VEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKV----TRERRPPGWMADYETGEG 807
Query: 1176 EELIIGSKDSPRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEELNQF 1231
EE+ EE+L +L ++ +P ++A+ D W AM+ E+
Sbjct: 808 EEI-----------------EENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESI 850
Query: 1232 QRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAP 1291
+N+ W+L P IG KWV++ KLNE GEV + KARLVA+GY+Q GIDYTE FAP
Sbjct: 851 VKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAP 910
Query: 1292 VARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLK 1351
VARL+ +R +L+ + ++Q+DV+SAFL+G ++EEVYV+QP GF + VYKL+
Sbjct: 911 VARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLR 970
Query: 1352 KSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTN 1411
K+LYGLKQAPRAWY R+ + +K +FER + TLF +T +ILIV +YVDD+IF ++
Sbjct: 971 KALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSD 1030
Query: 1412 ASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKV 1471
++C EF K M EFEMS +G++K FLGI++ QS G+++ Q +Y +E+L +F +++
Sbjct: 1031 KAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNA 1090
Query: 1472 MNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESH 1531
+ P+ P L+K++ G VD+ +++ ++GSL+YLT +RPD+++ VCL +RF S+PR SH
Sbjct: 1091 VKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSH 1150
Query: 1532 LTAVKRIFRYLKGTTNLGLLY--RKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENL 1589
A KRI RYLKGT LG+ Y RK+ KL+ F D+DYAGD +R+STS +
Sbjct: 1151 WLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGA 1210
Query: 1590 ISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIP-IYCDNTAAICL 1648
I WASK+Q +A+ST EAEYI+AA C Q +W++ LE S I CDN++ I L
Sbjct: 1211 ICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQL 1270
Query: 1649 SKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNL 1708
SK+P+LH ++KHIE++ H++RD V ++ +++ TE Q ADIFTKPL +E+F+ ++ L
Sbjct: 1271 SKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALL 1330
Query: 1709 NMHFVSD 1715
M +S+
Sbjct: 1331 GMVNMSE 1337
Score = 107 bits (268), Expect = 5e-23
Identities = 77/301 (25%), Positives = 137/301 (44%), Gaps = 43/301 (14%)
Query: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
P+F+G + +W M +F+ ELW ++E+G+ + + + +R A ++
Sbjct: 13 PRFDG---YYDFWSMTMENFLRS--RELWRLVEEGIPAIVVGTTPVSEAQR---SAVEEA 64
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
K K++ + +I R + DKST+KA++ S+ ++GS KVK A+ L ++EL
Sbjct: 65 KLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFEL 124
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
MK+ E I+ R T+V+ ++ + S VSKILRSL ++ V +IEE+ DL
Sbjct: 125 LAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDL 184
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+TLS+++L SL VHE LN H +++ + + + ++ S
Sbjct: 185 STLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGR-------- 236
Query: 272 DEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQ 331
+G ++ C+ C GHF +CP+ +
Sbjct: 237 ---------------------------GRGRGRSGTNRAIVECYKCHNLGHFQYECPEWE 269
Query: 332 K 332
K
Sbjct: 270 K 270
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 699 bits (1804), Expect = 0.0
Identities = 387/1052 (36%), Positives = 592/1052 (55%), Gaps = 46/1052 (4%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSIS-------IN 722
W +DSGC+ HMT E+ F + ++ + G I+ T G+ ++ I
Sbjct: 326 WLVDSGCTNHMTKEERYFSNINKSIKVPIRV---RNGDIVMTAGKGDITVMTRHGKRIIK 382
Query: 723 NVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDL 782
NV+LV GL+ NLLS+ Q +GY V F C + + + K I + + +KI S +
Sbjct: 383 NVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEI-MNIEMTDKSFKIKLSSV 441
Query: 783 ADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGK 842
++ + + + WHKRLGH + + + ++ +LV GLP + C AC GK
Sbjct: 442 EEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNLGK 497
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SF + T LE++H D+ GP+ S+ GS+Y ++ +DDY+ WV F+K K
Sbjct: 498 QSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKS 557
Query: 903 YACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNG 962
F F ++ + I +R P E+FCE GI + + P +PQQNG
Sbjct: 558 ETFATFKKFKALVEKQSNCSIKTLR----------PMEVFCEDEGINRQVTLPYSPQQNG 607
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEK-TAYELFKGRR 1021
ERKNR+L EMAR+M+ E +L WAEAV TS Y+QNR+ + + + T E + G +
Sbjct: 608 AAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHK 667
Query: 1022 PNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHV 1081
PN+S+ FG CY+ +K DAKA+ GI +GYS ++K Y+V+ E + VE S V
Sbjct: 668 PNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDV 727
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEA 1141
F + + ++ D ES ++ SS + + +N E
Sbjct: 728 VFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQET-------SSHDLSQIDDHANNGEG 780
Query: 1142 EPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIG 1201
E SS V +++ ++ + ++ PK K+KS +E++ + +PR Q
Sbjct: 781 ETSSHVLSQVNDQEERETSES---PK-KYKSM--KEIL---EKAPRMENDEAAQGIEAC- 830
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNE 1261
L++ EP+T +EA D W AM EE+ ++N W LV KP +KN+I KW+++ K +
Sbjct: 831 LVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDA 890
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAF 1321
G ++KARLVA+G+SQ+ GIDY ETFAPV+R + IR LL+YA LYQMDV+SAF
Sbjct: 891 SGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAF 950
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
LNG +EEEVYV QPPGF + V +L K+LYGLKQAPRAWY+R+ ++ I+N F R
Sbjct: 951 LNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSM 1010
Query: 1382 VDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQ 1441
D L+ + +D+LIV +YVDD+I N L F K M+DEFEM+ +G L +FLG++
Sbjct: 1011 NDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGME 1070
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLS--KEDTGTVVDQKLYRGM 1499
+NQ G+++ Q KY +L+ KF +++ K ++TP+ P + D D YR +
Sbjct: 1071 VNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTKYRRI 1130
Query: 1500 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1559
+G LLYL ASRPD++++ +R+ S P H KR+ RY+KGT+N G+L+ +
Sbjct: 1131 VGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPR 1190
Query: 1560 LIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1619
L+G+ D+D+ G ++KST+ LG + W S +Q T+A STAEAEYI+ + Q
Sbjct: 1191 LVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQA 1250
Query: 1620 LWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILD 1678
+W++ ED+ + IPI CDN +AI + +NP+ H R KHIEIK+HF+R+ KG++
Sbjct: 1251 IWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQ 1310
Query: 1679 IQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+++ E Q AD+ TK LSV RF+ +++ L +
Sbjct: 1311 LEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
Score = 81.3 bits (199), Expect = 5e-15
Identities = 64/298 (21%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHH 96
D E++ +W M + +LW ++E+GV + E R T ++ +
Sbjct: 13 DGEKYDFWSIKMATIFR--TRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTNDTM 70
Query: 97 KIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKD 156
++ I+ ++ + +++ S++K + L ++GS +V+ K L +YE +M D
Sbjct: 71 ALQ-ILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYD 129
Query: 157 DESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSV 216
+++I+ + L L + + + KIL SLP+++ V+ +E+ +DL+ L++
Sbjct: 130 NDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTM 189
Query: 217 EDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQS 276
+L+ LK E + E S K + + SKG+ ES + + ++ +Q
Sbjct: 190 SELLGILKAQEARVTAREESTKEGAFYVRSKGR-----------ESGFKQDNTNNRVNQD 238
Query: 277 VKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEK 334
K ++ ++ + K + +K+ + K C+ C K GH+ +C KE+
Sbjct: 239 KKWCGFHKSSKH-TEEECREKPKNDDHGKNKRSNIK-CYKCGKIGHYANECRSKNKER 294
>At3g25450 hypothetical protein
Length = 1343
Score = 650 bits (1677), Expect = 0.0
Identities = 380/1140 (33%), Positives = 628/1140 (54%), Gaps = 51/1140 (4%)
Query: 594 DPKSQKIKILKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKV-LNDQKP 652
D + ++ +++ + ++I K+ + ++QK K + + + V LN++
Sbjct: 220 DLEEEEEEVINKEIKAKSHVIDRLLKLIRLQEQKEKEEDDTHEAESLMMHEVVYLNEKNI 279
Query: 653 LSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTG 712
+ C+ +WYLD+G S HMTG +A F L G+V+FG + I G G
Sbjct: 280 RPTELESCIN-----NAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKG 334
Query: 713 TI-----GNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFK 767
+I G + +V+ + LK N+LS+ Q ++G D+ + TL +++ ++ K
Sbjct: 335 SIPFISKGGERKILFDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREG-NLLIK 393
Query: 768 GKRVEN-VYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPN 826
+R N +YK++ ++ + K + L + N+ +WH RLGH ++ I + K +LV G+ +
Sbjct: 394 AQRSRNRLYKVSL-EVENSKCLQLTTTNEST-IWHARLGHISFETIKAMIKKELVIGISS 451
Query: 827 IDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIV 886
CG+C GK + SF ++ LEL+H DL GP++ ++ +Y V++
Sbjct: 452 SVPQEKETCGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLI 511
Query: 887 DDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKH 946
DD+SR+ W +K K A F F ++ E I R+D GGEF + F+ FC K
Sbjct: 512 DDHSRYMWSILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKE 571
Query: 947 GILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIR 1006
GI ++P TPQQNGVVER+NRTL M R+++ N+ + W EAV S Y+ NR+ R
Sbjct: 572 GINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTR 631
Query: 1007 PMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYK 1066
+ +T YE+FK ++PN+ + FGC Y LKK D +++ ++LG SKAY+
Sbjct: 632 SLSNQTPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYR 691
Query: 1067 VYNSETQCVEESMHVKFDDREPG--SKTSEQSESNAGT---TDSEDASESDQPSDSKKYT 1121
+ + + + S V FD+ ++S +++ +GT T SE + +D T
Sbjct: 692 LLDPTKRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDIS--T 749
Query: 1122 EVESSPEAEITPEAESN-SEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHK-----SSHP 1175
E E + EAEI E E+ EAE Q++ + + +QVI+P +
Sbjct: 750 EPEETEEAEINGEDENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEA 809
Query: 1176 EELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRND 1235
E L++ D EP +EA W A +EE+ ++N
Sbjct: 810 EHLLLAVND----------------------EPWDFKEANKSKEWRDACKEEIQSIEKNR 847
Query: 1236 VWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARL 1295
W LV P IG KWVF+ K N G + + KARLVA+GY Q+ G+D+ E FAPVAR+
Sbjct: 848 TWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARI 907
Query: 1296 EAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLY 1355
E +RL+++ A ++G ++ +DV++AFL+G + E+VYV QP GF + + + VYKL K+LY
Sbjct: 908 ETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALY 967
Query: 1356 GLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLC 1415
GL+QAPRAW +L+ L + FE+ + +L+R+ ++IL+V +YVDD++ +N +
Sbjct: 968 GLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDII 1027
Query: 1416 KEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTP 1475
F K M +FEMS +G+L ++LGI++ QSK+G+ + Q +Y K++L++ + C +NTP
Sbjct: 1028 LNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTP 1087
Query: 1476 MHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAV 1535
M + LSK +D+ YR IG L YL +RPD+ ++V + +R+ +PRESH A+
Sbjct: 1088 MIASLELSKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAAL 1147
Query: 1536 KRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASK 1595
K+I RYL+GTT+ GL ++K + LIG+ D+ + D + KST + +L + I+W S+
Sbjct: 1148 KQILRYLQGTTSHGLYFKKGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQ 1207
Query: 1596 RQATIAMSTAEAEYISAASCCTQLLWMKHQL-EDYQINANSIPIYCDNTAAICLSKNPIL 1654
+Q + +S+ EAE+++A Q +W++ L E + I DN +AI L+KNP+
Sbjct: 1208 KQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVF 1267
Query: 1655 HSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNMHFVS 1714
H R+KHI ++HFIR+ V+ G ++++ + Q ADI TK L +F +++ + + VS
Sbjct: 1268 HGRSKHIHRRYHFIRECVENGQIEVEHVPGVRQKADILTKALGKIKFLEMRELIGVQGVS 1327
Score = 71.2 bits (173), Expect = 5e-12
Identities = 47/186 (25%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 93 KKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELF 152
+K+ R ++ SIP + +++ + T+ A++ ++ + G+++VKEA+ L+ +++
Sbjct: 58 EKNDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKL 117
Query: 153 RMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDL 211
+MKD E+I++ R + + L + S V K L+SLP ++ V A+E+ DL
Sbjct: 118 KMKDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDL 177
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
T + ED+ +K +E + + + S + +GK+ +E EEE D
Sbjct: 178 KTTTFEDIAGRIKTYEDRVWDDDDSHE-------DQGKL--------MTEVEEEVVDDLE 222
Query: 272 DEDQSV 277
+E++ V
Sbjct: 223 EEEEEV 228
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 644 bits (1661), Expect = 0.0
Identities = 355/1060 (33%), Positives = 576/1060 (53%), Gaps = 68/1060 (6%)
Query: 665 EKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSI 719
E+++ W+LDSGCS HM G + FL L V+ G ++ + G G + G +
Sbjct: 253 EEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQV 312
Query: 720 SINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF 779
I++V+ V GLK+NL S+ Q G C + +K +K + +N + F
Sbjct: 313 -ISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVF 371
Query: 780 SDLADQKVV----CLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDY-HSDAL 834
+ + K CL + +WHKR GH N + + +++ ++VKGLP D +A+
Sbjct: 372 AAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAV 431
Query: 835 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 894
C C KGK ++ S + +++ L+L+H D+ GP+N AS G +Y L +DD+SR W
Sbjct: 432 CDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCW 491
Query: 895 VKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 954
+ K + F F +++ E K++ +RSD GGE+ + F+ +C++ GI + ++
Sbjct: 492 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 551
Query: 955 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAY 1014
TPQQNGV ERKNR++ M R M+ E ++ + FW EAV + YI NR + + + T
Sbjct: 552 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 611
Query: 1015 ELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQC 1074
E + +P++ + FG Y L K D K+ + + G S+ SKAY++Y+ T
Sbjct: 612 EKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGK 671
Query: 1075 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPE 1134
+ S V+FD+ E G + ++S D+ D P E PE
Sbjct: 672 ILISRDVQFDE-ERGWEWEDKSLEEELVWDNSD-----------------HEPAGEEGPE 713
Query: 1135 AESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHP---EELIIGSKDSPRRTRS 1191
N + + + E + + + + P ++ ++G+ R +
Sbjct: 714 INHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNA---RVLIT 770
Query: 1192 HFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGT 1251
++E L + +P EEA + W AM+ E+ + N+ W+LV P + +IG
Sbjct: 771 QDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGL 830
Query: 1252 KWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGII 1311
KW+F+ K NE+GEV + KARLVA+GY Q+ G+D+ E FAPVA+ + IRL+L A G
Sbjct: 831 KWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWS 890
Query: 1312 LYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNF 1371
++Q+DV+SAFL+G ++E+V+V+QP GFE + VYKLKK+LYGLKQAPRAWY R+ F
Sbjct: 891 VFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEF 950
Query: 1372 LIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM 1431
K FE+ + TLF + + D L+V +YVDD+I+ ++ + + F M +EF M+ +
Sbjct: 951 FGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDL 1010
Query: 1432 GELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVV 1491
G++K+FLG+++ Q + G++++Q KY E++KK+ +E C + P+ P L+K G V
Sbjct: 1011 GKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK--AGAV- 1067
Query: 1492 DQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLL 1551
+R+ P E HL AVKRI RY++GT +LG+
Sbjct: 1068 -----------------------------SRYMESPNEQHLLAVKRILRYVQGTLDLGIQ 1098
Query: 1552 YRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYIS 1611
Y + +L+GF D+DYAGD +RKSTS LG I+WASK+Q + +ST EAE++S
Sbjct: 1099 YERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVS 1158
Query: 1612 AASCCTQLLWMKHQLEDYQI-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRD 1670
A+ Q +W+++ LE+ ++CDN++ I LSKNP+LH R+KHI +++HF+R+
Sbjct: 1159 ASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRE 1218
Query: 1671 YVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
V++G + + + T Q ADI TK + E F+ ++ + +
Sbjct: 1219 LVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1258
Score = 95.5 bits (236), Expect = 2e-19
Identities = 66/240 (27%), Positives = 113/240 (46%), Gaps = 32/240 (13%)
Query: 94 KHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFR 153
K HK++ + ASI +T + K T+K ++ S+ ++G+ +V+ A+ L +E+
Sbjct: 24 KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLE 83
Query: 154 MKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNT 213
MK E+I +SR + + ++ L + S V KILR+L ++ V AIEE+ ++
Sbjct: 84 MKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKE 143
Query: 214 LSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDE 273
L+V+ L SSL VHE +L+ H+ + ++ K+ ++ PDG
Sbjct: 144 LTVDGLQSSLMVHEQNLSRHDVEE-----------RVLKAETQWR--------PDGGRGR 184
Query: 274 DQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKE 333
S R + + + Y N D CF C K GH+ A+CP +KE
Sbjct: 185 GGSPS----------RGRGRGGYQGRGRGYVN---RDTVECFKCHKMGHYKAECPSWEKE 231
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 604 bits (1558), Expect = e-172
Identities = 379/1176 (32%), Positives = 614/1176 (51%), Gaps = 63/1176 (5%)
Query: 547 KDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKS---DPKSQKIKIL 603
K G F P+G ++ P+ A++T P+ + ++ T + P + I
Sbjct: 329 KHGFPPGFTPKGKSS----DKPPKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLIA 384
Query: 604 KRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRA 663
S + ++ P++ + + A++S+ P G+ + + I
Sbjct: 385 LFSSQLQPQIVSPQTASSQHE------ASSSQSVAPSGI---LFSPSTYCFIGILAVSHN 435
Query: 664 REKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTG---KIIGTGTIG-NSSI 719
+W +DSG + H++ ++ LF TL D V F TG +I G GT+ N I
Sbjct: 436 SLSSDTWVIDSGATHHVSHDRKLFQTL---DTSIVSFVNLPTGPNVRISGVGTVLINKDI 492
Query: 720 SINNVWLVDGLKHNLLSISQFC-DNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKIN 778
+ NV + + NL+SIS D G V F + C + + +GKR+ N+Y ++
Sbjct: 493 ILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD 552
Query: 779 FSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGAC 838
A + + ++ D VWHKRLGH ++ S++ L V G A C C
Sbjct: 553 TQSPA----ISVNAVVDVS-VWHKRLGHPSF---SRLDSLSEVLGTTRHKNKKSAYCHVC 604
Query: 839 QKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI 898
K K SF S + + S ELLHID++GP + ++ G KY L IVDD+SR TW+ +
Sbjct: 605 HLAKQKKLSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLL 663
Query: 899 KSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTP 958
KSK VF +F ++++ + ++ VRSD+ E F F + GI+ S P TP
Sbjct: 664 KSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETP 720
Query: 959 QQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFK 1018
+QN VVERK++ + +AR ++ ++N++ +W + V T+ ++ NR + KT +E+
Sbjct: 721 EQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLT 780
Query: 1019 GRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEES 1078
G+ P+ S FGC CY + KF +++ +FLGY K YK+ + E+ V S
Sbjct: 781 GKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHIS 840
Query: 1079 MHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESN 1138
+V+F + +S+QS TT S+ + D S T SP+
Sbjct: 841 RNVEFHEELFPLASSQQS----ATTASDVFTPMDPLSSGNSITSHLPSPQIS-------- 888
Query: 1139 SEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEES 1198
PS+++ ++ F + Q SHP I S + + SH
Sbjct: 889 ----PSTQISKRRITK-FPAHLQDYHCYFVNKDDSHP---ISSSLSYSQISPSHMLY--- 937
Query: 1199 LIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNK 1258
+ + I P++ EA W A+ +E+ +R D W++ P K +G KWVF K
Sbjct: 938 INNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVK 997
Query: 1259 LNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVE 1318
+ G + R KAR+VA+GY+Q+EG+DYTETF+PVA++ ++LLL + + L Q+D+
Sbjct: 998 FHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDIS 1057
Query: 1319 SAFLNGVIEEEVYVKQPPGFEDLKH----PDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1374
+AFLNG +EE +Y+K P G+ D+K P+ V +LKKS+YGLKQA R W+ + SN L+
Sbjct: 1058 NAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLA 1117
Query: 1375 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1434
FE+ D TLF R + + +++ +YVDDI+ ST + ++ ++ F++ +G L
Sbjct: 1118 LGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPL 1177
Query: 1435 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1494
K+FLG+++ ++ EG+ + Q KY ELL + DCK + PM P LSK D + D++
Sbjct: 1178 KYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKE 1237
Query: 1495 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1554
+YR ++G L+YLT +RPDI F+V +F S PR +HL AV ++ +Y+KGT GL Y
Sbjct: 1238 MYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSA 1297
Query: 1555 SLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1614
D L G+ DAD+ R+ST+ F+G +LISW SK+Q T++ S+AEAEY + A
Sbjct: 1298 EDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALAL 1357
Query: 1615 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQK 1674
++ W+ L ++++ +Y D+TAA+ ++ NP+ H R KHIEI H +R+ +
Sbjct: 1358 ASCEMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDN 1417
Query: 1675 GILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
G L + + T+ Q ADI TKPL +F + +++
Sbjct: 1418 GQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSI 1453
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 597 bits (1538), Expect = e-170
Identities = 344/951 (36%), Positives = 503/951 (52%), Gaps = 84/951 (8%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K K KA EK ++ + + +E+ WYLDSG
Sbjct: 293 ECKAPSNKKFKEKANYVEEKI-----------QEEDMLLMASYKKDEQEENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +K+ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C G K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGNQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQNGV ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+P +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK YK+YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E + E S E P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDKPEPTR--------EEPPSEEPTTPPTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL +++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
+EA+ W AM EE+ Q+ND W+L P+ IG KWV++ K N +GEV R KA
Sbjct: 841 FQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEV 1330
RLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDV+SAFLNG +EEEV
Sbjct: 901 RLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRT 1390
Y++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF + + L+ +
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVY 1450
K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LGI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKMDDSN--------------------------PSLVGSLRYLTCTR 1114
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+
Sbjct: 1115 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1165
Score = 82.0 bits (201), Expect = 3e-15
Identities = 72/327 (22%), Positives = 148/327 (45%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + KG K+ + C+NC K GH+ ++C +KFK +
Sbjct: 249 PHEDNTNQRGENSSRGRG-KGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFK---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 590 bits (1522), Expect = e-168
Identities = 345/1041 (33%), Positives = 566/1041 (54%), Gaps = 52/1041 (4%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINN 723
SWYLD+G S HMTG F L G+V+FG + I G G+I G ++ +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 724 VWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLA 783
V+ + LK N++S+ Q + G DV TL +++ + + +YK+ DL
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKV---DLN 395
Query: 784 DQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKI 843
+ V CL +L A + + +LV G+ NI + CG+C GK
Sbjct: 396 VENVKCL------------QLEAAT------MVRKELVIGISNIPKEKET-CGSCLLGKQ 436
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDY 903
+ F S+ LEL+H DL GP+ ++ +Y LV++DD++R+ W +K K
Sbjct: 437 ARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSE 496
Query: 904 ACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGV 963
A E F F T+++ E +KI R+D GGEF ++ F+ FC K GI ++P TPQQNGV
Sbjct: 497 AFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGV 556
Query: 964 VERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPN 1023
VER+NRTL M R+++ + + W EAV S YI NR+ R + +T YE+FK R+PN
Sbjct: 557 VERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPN 616
Query: 1024 ISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKF 1083
+ + FGC Y +L+K D +++ ++LG SKAY++ + + + +K+
Sbjct: 617 VEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKI-----IKW 671
Query: 1084 DDREPGSKTSEQSES-NAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAE 1142
++ + ++ + S G + ESD K E E+S E E E + +
Sbjct: 672 NNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQID 731
Query: 1143 PSSKVQNEIASEDFLD-NTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIG 1201
+ L +T+QV +P + ++ ++ + E+ L+
Sbjct: 732 AEETQPSHATPLPTLRRSTRQVGKPNYL------DDYVL---------MAEIEGEQVLLA 776
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNE 1261
+ EP +EA W A +EE+ ++N W L+ P ++ +IG KWVF+ K N
Sbjct: 777 IND--EPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNS 834
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAF 1321
G + + KARLVA+GY Q+ GIDY E FA VAR+E IR++++ A ++G ++ +DV++AF
Sbjct: 835 DGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAF 894
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
L+G + E+VYV QP GF + + VYKL K+LYGLKQAPRAW +L+ L + +F +
Sbjct: 895 LHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCS 954
Query: 1382 VDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQ 1441
+ +++RR +K +LIV IYVDD++ ++ L F K M +FEMS +G+L ++LGI+
Sbjct: 955 KEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIE 1014
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIG 1501
+ K G+ + Q +Y +++++ + +C + PM L K + ++ YR MIG
Sbjct: 1015 VLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIG 1074
Query: 1502 SLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
L Y+ +RPD+ + V + +R+ PRESH A+K++ RYLKGT + GL ++ L+
Sbjct: 1075 CLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLV 1134
Query: 1562 GFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLW 1621
G+ D+ ++ D + KST+ + +L + I+W S++Q +A+S+ EAE+++A Q +W
Sbjct: 1135 GYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIW 1194
Query: 1622 MKHQL-EDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQ 1680
++ E + + I DN +AI L+KN + H R+KHI ++HFIR+ V+ ++++
Sbjct: 1195 LQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVD 1254
Query: 1681 FIDTEHQWADIFTKPLSVERF 1701
+ Q ADI TKPL +F
Sbjct: 1255 HVPGVEQRADILTKPLGRIKF 1275
Score = 85.9 bits (211), Expect = 2e-16
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 54/288 (18%)
Query: 58 ELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDK 117
++W+ ++ G DD++ K+ R ++ S+P + +++
Sbjct: 9 KVWETIDPGSDDME----------------------KNDMARALLFQSVPESTILQVGKH 46
Query: 118 STAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQIL 177
T+KAM+ ++ G+++VKEAK L+ +++ MKD+E+I+E R + + + L
Sbjct: 47 KTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESL 106
Query: 178 KKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETS 236
+ S V K L+SLP ++ + A+E+ DLNT ED+V +K +E + + + S
Sbjct: 107 GEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDDS 166
Query: 237 KKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKIAMLSNKLEYLARKQKKF 296
+ +GK+ Y SES ++ G + +
Sbjct: 167 PE-------EQGKL-----MYANSESSYDTRGGRG------------------RGRGRSS 196
Query: 297 LSKKGSYKNSKKEDQKG-CFNCKKPGHFIADCPDLQKEKFKGKSKKSS 343
+G Y +++ K C+ C K GH+ ++C D + K + ++ +
Sbjct: 197 GRGRGGYGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQN 244
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 589 bits (1518), Expect = e-168
Identities = 353/1049 (33%), Positives = 567/1049 (53%), Gaps = 39/1049 (3%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG-NSSISINNVWLV 727
+W +DSG + H++ +++LF +L V T KI G GT+ N I + NV +
Sbjct: 430 TWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFI 489
Query: 728 DGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQK 786
+ NL+SIS D+ G V F K +C + + + +G+RV N+Y + D+ DQ
Sbjct: 490 PEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLL---DVGDQS 546
Query: 787 VVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKS 846
+ ++ +WH+RLGHA+ + + IS G C C K K
Sbjct: 547 ISVNAVVDIS--MWHRRLGHASLQRLDAISDSL---GTTRHKNKGSDFCHVCHLAKQRKL 601
Query: 847 SFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACE 906
SF + + V +LLHID++GP + ++ G KY L IVDD+SR TW+ +K+K
Sbjct: 602 SFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLT 660
Query: 907 VFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVER 966
VF +F Q++++ ++K+ VRSD+ E + F F + GI+ S P TP+QN VVER
Sbjct: 661 VFPAFIQQVENQYKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQNSVVER 717
Query: 967 KNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISY 1026
K++ + +AR ++ ++ + W + V T+ ++ NR + ++ KT YE+ G P
Sbjct: 718 KHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQ 777
Query: 1027 FHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDR 1086
FGC CY + KF +++ +FLGY K YK+ + E+ V S +V+F +
Sbjct: 778 LRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEE 837
Query: 1087 EPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSK 1146
+ SES+ S SD+ S +++ P+ S +P +
Sbjct: 838 VFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQRVRKPPAH 897
Query: 1147 VQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIG-SKDSPRRTRSHFRQEESLIGLLSI 1205
+ D+ NT Q HK +P I SK SP SH + + I
Sbjct: 898 LN------DYHCNTMQS-----DHK--YPISSTISYSKISP----SHMCY---INNITKI 937
Query: 1206 IEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEV 1265
P EA W A+ E+ ++ + W++ P K +G KWVF K G +
Sbjct: 938 PIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNL 997
Query: 1266 TRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGV 1325
R KARLVA+GY+Q+EG+DYT+TF+PVA++ I+LLL + + L Q+DV +AFLNG
Sbjct: 998 ERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGE 1057
Query: 1326 IEEEVYVKQPPGFEDLKH----PDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
+EEE+++K P G+ + K + V +LK+S+YGLKQA R W+ + S+ L+ F++
Sbjct: 1058 LEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTH 1117
Query: 1382 VDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQ 1441
D TLF + + +IV +YVDDI+ ST+ + + ++ + F++ +G+LK+FLG++
Sbjct: 1118 GDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLE 1177
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIG 1501
+ ++ G+ + Q KY ELL+ + CK ++ PM P + K+D + D + YR ++G
Sbjct: 1178 VARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVG 1237
Query: 1502 SLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
L+YLT +RPDI F+V +F S PR +HLTA R+ +Y+KGT GL Y S D L
Sbjct: 1238 KLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLK 1297
Query: 1562 GFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLW 1621
GF D+D+A + R+ST+ F+G++LISW SK+Q T++ S+AEAEY + A +++W
Sbjct: 1298 GFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVW 1357
Query: 1622 MKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQF 1681
+ L Q + +Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L +
Sbjct: 1358 LFTLLVSLQASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLH 1417
Query: 1682 IDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ TE Q ADI TKPL +F+ +K +++
Sbjct: 1418 VRTEDQVADILTKPLFPYQFEHLKSKMSI 1446
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 582 bits (1501), Expect = e-166
Identities = 355/1064 (33%), Positives = 566/1064 (52%), Gaps = 43/1064 (4%)
Query: 668 RSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKII---GTGTI--GNSSISIN 722
+ W+ DS + H+T + T +G + G+ T I G+ TI N I +N
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 723 NVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSD 781
V +V ++ +LLS+S+ CD+ V F +++ + + G R +Y
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYV----- 434
Query: 782 LADQKVVCLLSMND---KKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGAC 838
L +Q+ V L S + VWH RLGHAN + + LQ K + + +C C
Sbjct: 435 LENQEFVALYSNRQCAATEEVWHHRLGHANSKALQH---LQNSKAIQINKSRTSPVCEPC 491
Query: 839 QKGKIVKSSFKSKDIVSTSR---PLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWV 895
Q GK + F ++S SR PL+ +H DL+GP S G KY + VDDYSR++W
Sbjct: 492 QMGKSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWF 547
Query: 896 KFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSP 955
+ +K VF SF ++++ KI +SD GGEF + + +HGI H S P
Sbjct: 548 YPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCP 607
Query: 956 RTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYE 1015
TPQQNG+ ERK+R L E+ +M+ ++ + FW E+ T+ YI NR+ + + YE
Sbjct: 608 YTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYE 667
Query: 1016 LFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCV 1075
G +P+ S FG CY KFD ++ + +FLGY+ + K Y+ + T V
Sbjct: 668 ALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKV 727
Query: 1076 EESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEA 1135
S +V F++ E K QS +T A + ++ S+ V ++P +
Sbjct: 728 YISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISE----ISVPAAPVQLFSKPI 783
Query: 1136 ESNSEAEPSSKVQNEIASEDFLDNTQ---QVIQPKFKHKSSHPEELIIGSKDSPRRTRSH 1192
+ N+ A S+V ++ + N + + + P + +++ E+ +I S R+++
Sbjct: 784 DLNTYA--GSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQ-VINSHAMTTRSKAG 840
Query: 1193 FRQEESLIGLLS----IIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNI 1248
++ + L++ EPKT+ A+ GW A+ EE+N+ W LVP NI
Sbjct: 841 IQKPNTRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNI 900
Query: 1249 IGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINH 1308
+ +KWVF+ KL+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL+L + +
Sbjct: 901 LSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSK 960
Query: 1309 GIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRL 1368
G + Q+DV +AFL+G ++E V++ QP GF D + P HV +L K++YGLKQAPRAW+D
Sbjct: 961 GWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTF 1020
Query: 1369 SNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEM 1428
SNFL+ F + D +LF IL + +YVDDI+ ++ SL ++ + +++ F M
Sbjct: 1021 SNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSM 1080
Query: 1429 SMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTG 1488
+G ++FLGIQI G+++HQT Y ++L++ + DC M TP+ L ++
Sbjct: 1081 KDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQ--QLDNLNSE 1138
Query: 1489 TVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548
+ +R + G L YLT +RPDI F+V + P S +KRI RY+KGT +
Sbjct: 1139 LFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGM 1198
Query: 1549 GLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAE 1608
GL +++ L + D+D+AG + R+ST+ C LG NLISW++KRQ T++ S+ EAE
Sbjct: 1199 GLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAE 1258
Query: 1609 YISAASCCTQLLWMKHQLEDYQINANSIP--IYCDNTAAICLSKNPILHSRAKHIEIKHH 1666
Y + ++ W+ L D I +P +YCDN +A+ LS NP LH+R+KH + +H
Sbjct: 1259 YRALTYAAREITWISFLLRDLGI-PQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYH 1317
Query: 1667 FIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+IR+ V G+++ Q I Q AD+FTK L F ++ L +
Sbjct: 1318 YIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>At1g70010 hypothetical protein
Length = 1315
Score = 567 bits (1461), Expect = e-161
Identities = 351/1013 (34%), Positives = 542/1013 (52%), Gaps = 45/1013 (4%)
Query: 708 IIGTGTIGNSSISINNVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITF 766
I G+ +G I +N+V + K NLLS+S + G + F +T+C L + + +
Sbjct: 313 ISGSVHLGRHLI-LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVG 371
Query: 767 KGKRVENVYKINFSDLA----DQKV-VCLLSMNDKKWVWHKRLGHANWRLISKISKL-QL 820
GK+V N+Y ++ L+ D + V ++ +D +WHKRLGH + + + +S L
Sbjct: 372 MGKQVANLYIVDLDSLSHPGTDSSITVASVTSHD---LWHKRLGHPSVQKLQPMSSLLSF 428
Query: 821 VKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSK 880
K N D+H C C K F S + S SRP +L+HID +GP + + G +
Sbjct: 429 PKQKNNTDFH----CRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYR 483
Query: 881 YGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFE 940
Y L IVDDYSR TWV +++K V +F T ++++ E I VRSD+ E F
Sbjct: 484 YFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FT 540
Query: 941 LFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQ 1000
F GI+ S P TPQQN VVERK++ + +AR++ ++++ +W + + T+ Y+
Sbjct: 541 QFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLI 600
Query: 1001 NRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSE 1060
NR+ + +K +E+ P + FGC CY + KF +A+ F+GY
Sbjct: 601 NRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPS 660
Query: 1061 RSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKY 1120
K YK+ + ET + S HV F + S+ S+ + + Q S
Sbjct: 661 GFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHV 720
Query: 1121 TEVESSPEAEITPEAE-SNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHK--SSHPEE 1177
+SS EI P A +N+ EPS + + A + +Q + H SS P E
Sbjct: 721 NPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKP------AYLQDYYCHSVVSSTPHE 774
Query: 1178 LIIGSKDSPRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEELNQFQR 1233
+ R+ S+ R + + L+ + EP EA W AM E + +
Sbjct: 775 I--------RKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEG 826
Query: 1234 NDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVA 1293
W++ P+ K IG +W+F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA
Sbjct: 827 THTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVA 886
Query: 1294 RLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFE----DLKHPDHVYK 1349
+L +++LLL A + L Q+D+ +AFLNG ++EE+Y++ P G+ D P+ V +
Sbjct: 887 KLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCR 946
Query: 1350 LKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGS 1409
LKKSLYGLKQA R WY + S+ L+ F + D T F + L V +Y+DDII S
Sbjct: 947 LKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIAS 1006
Query: 1410 TNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDC 1469
N + M+ F++ +GELK+FLG++I +S +G+++ Q KY +LL + C
Sbjct: 1007 NNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGC 1066
Query: 1470 KVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRE 1529
K + PM P+ + + G V+ YR +IG L+YL +RPDI F+V A+F PR+
Sbjct: 1067 KPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRK 1126
Query: 1530 SHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENL 1589
+HL AV +I +Y+KGT GL Y + + +L + +ADY R R+STS C FLG++L
Sbjct: 1127 AHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSL 1186
Query: 1590 ISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICL 1648
I W S++Q ++ S+AEAEY S + +L+W+ + L++ Q+ + ++CDN AAI +
Sbjct: 1187 ICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHI 1246
Query: 1649 SKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
+ N + H R KHIE H +R+ + KG+ ++ I+TE Q AD FTKPL F
Sbjct: 1247 ANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHF 1299
>At1g37110
Length = 1356
Score = 550 bits (1418), Expect = e-156
Identities = 344/1073 (32%), Positives = 563/1073 (52%), Gaps = 78/1073 (7%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W LDSGC+ HMT + F++ K + G + + + G GTI G + + NV
Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILENV 367
Query: 725 WLVDGLKHNLLSISQFCDNGY-------DVTFSKTNCTLVNKDDKSITFKGKRVENVYKI 777
V L+ NL+S GY V + K N T + +G +Y +
Sbjct: 368 KYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTAL---------RGSLSNGLYVL 418
Query: 778 NFSDLADQKVVCLLSMNDKKW-VWHKRLGHANWRLISKISKLQLV--KGLPNIDYHSDAL 834
+ S + + +C + K +WH RLGH + + ++ L+ K + +++
Sbjct: 419 DGSTVMSE--LCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELEF----- 471
Query: 835 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVN-TASLYGSKYGLVIVDDYSRWT 893
C C GK K SF S L +H DL+G N T S+ G +Y L I+DD +R
Sbjct: 472 CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKV 530
Query: 894 WVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFS 953
W+ F+KSKD + F + + ++++ K+ +R+D+G EF N F+ +C++HGI +
Sbjct: 531 WLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRT 590
Query: 954 SPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTA 1013
TPQQNGV ER NRT+ E R +++++ + + FWAEA T+ Y+ NR +
Sbjct: 591 CTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVP 650
Query: 1014 YELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQ 1073
E++ R+P + +FG Y+ + LK +A +G FLGY +K YKV+ E +
Sbjct: 651 EEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKP---RALKGFFLGYPAGTKGYKVWLLEEE 707
Query: 1074 CVEESMHVKFDD----REPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEA 1129
S +V F + R+ K + N T S + ++ K+ E S
Sbjct: 708 KCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQN-------KFAEASGSGGV 760
Query: 1130 -EITPEAESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRR 1188
++ ++E +E E SS + E+ ++ + TQ+ PK +++ ++D RR
Sbjct: 761 IQLQSDSEPITEGEQSSDSEEEV---EYSEKTQET--PKRTGLTTYKL-----ARDRVRR 810
Query: 1189 T---RSHFRQEESLIGLLSIIE------PKTVEEALSD---DGWILAMQEELNQFQRNDV 1236
+ F +E S+ L ++E P++ +EA+ + W +A +E++ +N
Sbjct: 811 NINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGT 870
Query: 1237 WDLVPKPSQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARL 1295
WDLV KP + IIG +W+F+ K G E TR KARLVA+GY+Q+EG+DY E FAPV +
Sbjct: 871 WDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKH 930
Query: 1296 EAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLY 1355
+IR+L+S ++ + L QMDV++ FL+G +EEE+Y++QP GF + V +LKKSLY
Sbjct: 931 VSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLY 990
Query: 1356 GLKQAPRAWYDRLSNFLIKNDFERGQVDTTLF-RRTLKKDILIVQIYVDDIIFGSTNASL 1414
GLKQ+PR W R F+ F R + D ++ + + D + + +YVDD++ + +
Sbjct: 991 GLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAE 1050
Query: 1415 CKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKVM 1472
+ + EFEM MG LGI I + ++G + + Q Y +++L +F + K+
Sbjct: 1051 INRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMT 1110
Query: 1473 NTPMHPTCTLS---KEDTGTVVDQKLYRGMIGSLLY-LTASRPDILFSVCLCARFQSDPR 1528
N P+ L+ +ED D Y +GS++Y + +RPD+ +++CL +R+ S P
Sbjct: 1111 NAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPG 1170
Query: 1529 ESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGEN 1588
H AVK + RYLKG +L L++ K D+ + G+CD++YA D R+S S +G N
Sbjct: 1171 SMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGN 1230
Query: 1589 LISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICL 1648
+SW + Q +AMST EAEYI+ A + +W+K L+D + + + I+CD+ +AICL
Sbjct: 1231 TVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICL 1290
Query: 1649 SKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
SKN + H R KHI+++ ++IRD V+ G +D+ I T D TK + V +F
Sbjct: 1291 SKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKF 1343
Score = 37.4 bits (85), Expect = 0.076
Identities = 70/311 (22%), Positives = 117/311 (37%), Gaps = 59/311 (18%)
Query: 34 FNGDPEEFSWWKTNMYSF--IMGLDEELWDILEDGVDDLDLDE------EGAAIDRRIHT 85
FNGD +FS WK + + ++GL + L D L E +G + +
Sbjct: 13 FNGD-RDFSLWKIRIQAQLGVLGLKDTLTDFSLTKTVPLTKSEAKQESGDGESSGTK-EV 70
Query: 86 PAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALML 145
P K+ ++ + + II+ I +K++ +T ++A+L +KK E
Sbjct: 71 PDPVKI-EQSEQAKNIIINHISDVVLLKVNHYATTADLWATL------NKKYMETSLPNR 123
Query: 146 VH-QYEL--FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKV 202
++ Q +L F+M +I++ F +V+ L L+ IL SLP+
Sbjct: 124 IYTQLKLYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLK 183
Query: 203 TAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASES 262
++ TL+V+D+ SS K E L E
Sbjct: 184 HTLKYGN--KTLTVQDVTSSAKSLERELAEAV---------------------------- 213
Query: 263 EEESPDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGH 322
D D+ Q+ + + QK K S NSK + C+ CKK GH
Sbjct: 214 -------DLDKGQAAVLYTTERGRPLVRNNQKGGQGKGRSRSNSKTKVP--CWYCKKEGH 264
Query: 323 FIADCPDLQKE 333
DC +K+
Sbjct: 265 VKKDCYSRKKK 275
>At3g45520 copia-like polyprotein
Length = 1363
Score = 548 bits (1412), Expect = e-155
Identities = 337/1070 (31%), Positives = 556/1070 (51%), Gaps = 60/1070 (5%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W +D+GC HMT ++ + GG V+ G ++ G GT+ ++++ NV
Sbjct: 316 WIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNV 375
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F G+ F N L K + +G+R + +Y ++ D
Sbjct: 376 RYIPDMDRNLLSLGTFEKAGHK--FESENGMLRIKSGNQVLLEGRRYDTLYILHGKPATD 433
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLV--KGLPNIDYHSDALCGACQKGK 842
+ + + ND +WH+RL H + + +S + K + K + +D D + G +K
Sbjct: 434 ESLA-VARANDDTVLWHRRLCHMSQKNMSLLIKKGFLDKKKVSMLDTCEDCIYGRAKK-- 490
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSK 901
+ + D T + LE +H DL+G P SL +Y + +DDY+R WV F+K+K
Sbjct: 491 -IGFNLAQHD---TKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTK 546
Query: 902 DYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQN 961
D A E F S+ + ++++ ++ +R+D+G EF N F+ FCE+ G + TPQQN
Sbjct: 547 DEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQN 606
Query: 962 GVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRR 1021
GVVER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ + + + + G+
Sbjct: 607 GVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDKRWSGKA 666
Query: 1022 PNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHV 1081
P SY ++GC ++ K + +A++G+ +GY K YKV+ E + S +V
Sbjct: 667 PIYSYLRRYGCVTFVHTDGG---KLNLRAKKGVLIGYPSGVKGYKVWLIEEKKCVVSRNV 723
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDAS--ESDQPSDSKKYTEVESSPEAEITPEAESNS 1139
F + ++ E + D S + D +D + E S +A++TP
Sbjct: 724 SFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQS-QAQVTPATRGAV 782
Query: 1140 EAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESL 1199
+ P ++I D H+S L+ + R F E+
Sbjct: 783 TSTPPRYETDDIEETDV-------------HQSPLSYHLVRDRERREIRAPRRFDDEDYY 829
Query: 1200 IGLL------SIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKNIIG 1250
L +EP +EA+ D D W LAM EE+ +ND W V +P ++ IIG
Sbjct: 830 AEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIG 889
Query: 1251 TKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHG 1309
++W+++ K G E R KARLVA+GY+Q+EG+DY E FAPV + +IR+LLS
Sbjct: 890 SRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQEN 949
Query: 1310 IILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLS 1369
+ L Q+DV++AFL+G ++E++Y+ P G E L + V L KSLYGLKQAPR W ++ +
Sbjct: 950 LELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFN 1009
Query: 1370 NFLIKNDFERGQVDTTLFRRTLKKD-ILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEM 1428
+++ + F+R D+ + + L D + + YVDD++ + N K + +FEM
Sbjct: 1010 HYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEM 1069
Query: 1429 SMMGELKFFLGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKVMNTPM--HPTCTLSK 1484
+G K LGI+I +E +++ Q Y ++LK F + + K TP+ H +
Sbjct: 1070 KDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSAT 1129
Query: 1485 EDTGTVVDQKL----YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIF 1539
E+ + ++ + Y +GS++Y + +RPD+ + V + +RF S P + H VK +
Sbjct: 1130 EEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVL 1189
Query: 1540 RYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQAT 1599
RY+KGT + L Y+++ D+ + G+CDADYA D +R+S + LG N ISW S Q
Sbjct: 1190 RYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1249
Query: 1600 IAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAK 1659
+A S+ E EY+S + +W+K L+D+ ++ I+CD+ +AI LSKN + H R K
Sbjct: 1250 VAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTK 1309
Query: 1660 HIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF----DFIK 1705
HI++K HFIR+ + G +++ I TE ADIFTK L V +F DF++
Sbjct: 1310 HIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFLR 1359
Score = 59.7 bits (143), Expect = 1e-08
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 55/320 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSFI--MGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I +GL L + + + D E + D + +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHIDMLGLSAVLRE--SETPMGKERDSEKSDEDEKEEREKMEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL----MLV 146
+K K R IV S+ K+ +++A AM +L ++ +KAL L
Sbjct: 67 FEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEAL-------DRLYMSKALPNRIYLK 119
Query: 147 HQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIE 206
+ F+M ++ SIE F +V+ L+ L D +L SLP + ++
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
+ LS++++ +++ E+ G + KS K
Sbjct: 180 YSSGKTVLSLDEVAAAIYSRELEF-----------------GSVKKSIKG---------- 212
Query: 267 PDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+ + +K E R ++K KG K SK + ++GC+ C + GH +
Sbjct: 213 ---------QAEGLYVKDKAENRGRSEQK---DKGKGKRSKSKSKRGCWICGEDGHLKST 260
Query: 327 CPDLQKEKFKGKSKKSSFNS 346
CP+ K +FK + +S
Sbjct: 261 CPNKNKPQFKNQGSNKGESS 280
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 546 bits (1406), Expect = e-155
Identities = 345/1063 (32%), Positives = 561/1063 (52%), Gaps = 58/1063 (5%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG--NS---SISINNV 724
W LD+GCS HMT ++ F GG V+ G ++ G GTI NS +I + NV
Sbjct: 309 WILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLTNV 368
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F GY F + L K + G+R + +Y +N+ +A
Sbjct: 369 RYIPDMDRNLLSLGTFEKAGYK--FESEDGILRIKAGNQVLLTGRRYDTLYLLNWKPVAS 426
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKG-LPNIDYHSDALCGACQKGKI 843
+ + + +D +WH+RL H + K ++ + KG L S +C C GK
Sbjct: 427 ESLAVVKRADDTV-LWHQRLCHMS----QKNMEILVRKGFLDKKKVSSLDVCEDCIYGKA 481
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SF S T LE +H DL+G P SL +Y + I+DD++R WV F+K+KD
Sbjct: 482 KRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKD 540
Query: 903 YACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNG 962
A E F + ++++ + ++ +R+D+G EF N+ F+ FCE GI + TPQQNG
Sbjct: 541 EAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNG 600
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
V ER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ + + + + G P
Sbjct: 601 VAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPP 660
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVK 1082
SY ++GC ++ +T D K + +A++G+ +GY K YKV+ + + S ++
Sbjct: 661 VYSYLRRYGCVAFV-HTDD--GKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNII 717
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT---PEAESNS 1139
F + ++ E+ + T+ +D + S D + +V S + E+ P ES
Sbjct: 718 FQENAVYKDLMQRQENVS--TEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPESPV 775
Query: 1140 EAEPSSKVQNEIASEDFLDN--TQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEE 1197
+ P+++ N+ D + + +++ + K + P D + + E+
Sbjct: 776 VSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRF----DDEDYYAEALYTTED 831
Query: 1198 SLIGLLSIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1254
+EP+ +A D D W LAM EE++ ++N+ W +V +P + IIG +W+
Sbjct: 832 G-----EAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWI 886
Query: 1255 FRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILY 1313
F+ KL G E R KARLVA+GY+Q+EGIDY E FAPV + +IR+LLS + L
Sbjct: 887 FKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELE 946
Query: 1314 QMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLI 1373
Q+DV++AFL+G ++E++Y+ P G+E + + V L K+LYGLKQAP+ W ++ NF+
Sbjct: 947 QLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMK 1006
Query: 1374 KNDFERGQVDTTLFRRTLKK-DILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMG 1432
+ F + D+ + + L ++ + IYVDDI+ S N + FEM +G
Sbjct: 1007 EICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLG 1066
Query: 1433 ELKFFLGIQINQSKE-GV-YVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTV 1490
K LG++I + + GV ++ Q Y ++L+ + + + K TP+
Sbjct: 1067 AAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQ-----AA 1121
Query: 1491 VDQKL-----------YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRI 1538
+QKL Y +GS++Y + +RPD+ + V + +RF S P + H VK +
Sbjct: 1122 TEQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWV 1181
Query: 1539 FRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQA 1598
RY+KGT L Y+KS + ++G+CDADYA D +R+S + LG N ISW S Q
Sbjct: 1182 LRYIKGTLKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQR 1241
Query: 1599 TIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRA 1658
+A ST E+EY+S + +W+K L+D+ S+ I+CD+ +AI LSKN + H R
Sbjct: 1242 VVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERT 1301
Query: 1659 KHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
KHI++K+HFIR+ + G +++ I TE ADIFTK L+V +F
Sbjct: 1302 KHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKF 1344
Score = 60.8 bits (146), Expect = 6e-09
Identities = 66/310 (21%), Positives = 125/310 (40%), Gaps = 55/310 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I+GL+ L + G LDE + ++ +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEKLEK--FEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLVHQ 148
L +K K R IV S+ K+ +STA AM +L K+ +KAL + +
Sbjct: 67 LEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLAL-------DKLYMSKALPNRIYPK 119
Query: 149 YEL--FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIE 206
+L F+M ++ S+E F +++ L+ + D +L +LP + ++
Sbjct: 120 QKLYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
+ + L+++++ +++ E+ L + S K ++ L K K K +
Sbjct: 180 YSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGEQKG------ 233
Query: 267 PDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKGCFNCKKPGHFIAD 326
KG K K + + GC+ C + GHF +
Sbjct: 234 ---------------------------------KGKGKKGKSKKKPGCWTCGEEGHFRSS 260
Query: 327 CPDLQKEKFK 336
CP+ K +FK
Sbjct: 261 CPNQNKPQFK 270
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 535 bits (1377), Expect = e-151
Identities = 359/1145 (31%), Positives = 581/1145 (50%), Gaps = 89/1145 (7%)
Query: 596 KSQKIKILKRSEPVHQNLIKPESKIPKQKDQKNKAAT--ASEKTIPKGVKPKVLNDQKPL 653
K Q K ++R++ Q ES + K + N A A+++T+ V + N+
Sbjct: 231 KKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLV--VTDSIANE---- 284
Query: 654 SIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGT 713
W LD+GCS HMT K F G VK G + + G G+
Sbjct: 285 ----------------WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGS 328
Query: 714 I-----GNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKG 768
I S + + +V + + NL+S+ D G F + L S KG
Sbjct: 329 IKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRG--CWFKSQDGILKIVKGCSTILKG 386
Query: 769 KRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNID 828
++ + +Y ++ + + + D+ +WH RLGH + K ++ + KG +
Sbjct: 387 QKRDTLYILD-GVTEEGESHSSAEVKDETALWHSRLGHMS----QKGMEILVKKGCLRRE 441
Query: 829 YHSDA-LCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIV 886
+ C C GK + SF V T L +H DL+G P N ASL S+Y + V
Sbjct: 442 VIKELEFCEDCVYGKQHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFV 500
Query: 887 DDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKH 946
DDYSR W+ F++ KD A E F + ++++ + K+ K+R+D+G E+ N FE FC++
Sbjct: 501 DDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEE 560
Query: 947 GILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIR 1006
GI+ + TPQQNG+ ER NRT+ + R+M+ + + K FWAEA +T+ Y+ NR
Sbjct: 561 GIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPST 620
Query: 1007 PMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYK 1066
+ E + G P++S +FGC YI + K + ++++GIF Y E K YK
Sbjct: 621 AINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQG---KLNPRSKKGIFTSYPEGVKGYK 677
Query: 1067 VYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSK-----KYT 1121
V+ E + S +V F ++ S++ +D ED + +D + T
Sbjct: 678 VWVLEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGAT 737
Query: 1122 EVESSPEAEITPE----------AESNSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHK 1171
+ S+P T + SE E S V++ + D ++ I+ K+
Sbjct: 738 QDNSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYN 797
Query: 1172 SSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSD---DGWILAMQEEL 1228
S+ S+D + EPK+ +EAL D + W AM+EE+
Sbjct: 798 ESNMVGFAYYSEDDGKP------------------EPKSYQEALLDPDWEKWNAAMKEEM 839
Query: 1229 NQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTE 1287
+N WDLV KP + +IG +WVF K G E R ARLVA+G++Q+EG+DY E
Sbjct: 840 VSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNE 899
Query: 1288 TFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHV 1347
F+PV + +IR LLS +++ + L QMDV++AFL+G +EEE+Y+ QP GFE + + V
Sbjct: 900 IFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKV 959
Query: 1348 YKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI-VQIYVDDII 1406
LK+SLYGLKQ+PR W R F+ + R D+ ++ + D I + +YVDD++
Sbjct: 960 CLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDML 1019
Query: 1407 FGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG--VYVHQTKYTKELLKKF 1464
S N S E +L+ EFEM +G+ K LG++I++ ++ + + Q Y K++L+ F
Sbjct: 1020 IASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSF 1079
Query: 1465 KLEDCKVMNTPMHPTCTLS----KEDTGTVVDQKL--YRGMIGSLLY-LTASRPDILFSV 1517
++++ K ++TP+ L KE K+ Y IGS++Y + +RPD+ +S+
Sbjct: 1080 QMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSL 1139
Query: 1518 CLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKS 1577
+ +RF S P + H AVK + RY++GT L +RK D+ L G+CD+DY + R+S
Sbjct: 1140 GVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRS 1199
Query: 1578 TSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIP 1637
+ +G N ISW SK Q +A+S+ EAEY++ + LW+K + + + +
Sbjct: 1200 ITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVE 1259
Query: 1638 IYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLS 1697
++ D+ +AI L+KN + H R KHI+I+ HFIRD + G++ + I TE A+IFTK +
Sbjct: 1260 VHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVP 1319
Query: 1698 VERFD 1702
+ +F+
Sbjct: 1320 LAKFE 1324
Score = 32.0 bits (71), Expect = 3.2
Identities = 18/82 (21%), Positives = 42/82 (50%)
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
F+M++++ I+E F +V+ L L+ +L SLP+R+ V ++ +
Sbjct: 100 FKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSR 159
Query: 212 NTLSVEDLVSSLKVHEMSLNEH 233
L ++D++ + + E L+++
Sbjct: 160 EKLRLDDVMVAARDKERELSQN 181
>At1g26990 polyprotein, putative
Length = 1436
Score = 534 bits (1375), Expect = e-151
Identities = 359/1057 (33%), Positives = 546/1057 (50%), Gaps = 79/1057 (7%)
Query: 668 RSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG-NSSISINNVWL 726
R+W +DSG S H+T E+ L+ T D V+ T KI GTG I ++S++NV
Sbjct: 419 RAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTDALSLHNVLF 478
Query: 727 VDGLKHNLLSISQFCDNGYD-VTFSKTNCTLVNKDDKSITFKGKRVENVYKINFS-DLAD 784
+ K NLLS+S V+F+ C + + + KG +V N+Y +N L D
Sbjct: 479 IPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVD 538
Query: 785 Q-----KVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL-CGAC 838
K VC N+ + +WHKRLGH ++ +KI L V LP + D+ C C
Sbjct: 539 VSSFPGKSVCSSVKNESE-MWHKRLGHPSF---AKIDTLSDVLMLPKQKINKDSSHCHVC 594
Query: 839 QKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI 898
K FKS + + + EL+HID +GP + ++ +Y L IVDD+SR TW+ +
Sbjct: 595 HLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLL 653
Query: 899 KSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTP 958
K K VF SF ++++ K+ VRSD+ E + ELF K GI + P TP
Sbjct: 654 KQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFN--ELFA-KEGIKADHPCPETP 710
Query: 959 QQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFK 1018
+QN VVERK++ L +AR ++ ++ + +W + V T+ ++ NR+ + +T YE
Sbjct: 711 EQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLT 770
Query: 1019 GRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEES 1078
+P+ S FGC CY + KFD +A+ IFLGY K YK+ + ET V S
Sbjct: 771 KGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSIS 830
Query: 1079 MHVKF-DDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAES 1137
HV F +D P + S D P++ + V+SS +A + S
Sbjct: 831 RHVIFYEDIFPFAS----SNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESS 886
Query: 1138 NS---EAEPSSKVQNEIAS--EDF--LDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTR 1190
+ +EP S Q ++ S +DF +NT P S +P I
Sbjct: 887 SMIFVPSEPKSTRQRKLPSHLQDFHCYNNT-----PTTTKTSPYPLTNYI---------- 931
Query: 1191 SHFRQEESLIGLLSIIE----PKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQK 1246
S+ E ++II P+ EA D W AM +E++ F R W + P+ K
Sbjct: 932 SYSYLSEPFGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGK 991
Query: 1247 NIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAI 1306
+G KW+ K G + R+KARLVA+GY+QQEGID+ TF+PVA++ +++LLS A
Sbjct: 992 VAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAP 1051
Query: 1307 NHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYD 1366
L+Q+D+ +A LNG +EEE+Y+K PPG+ +++ G + +P A
Sbjct: 1052 KMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQ-------------GQEVSPNA--- 1095
Query: 1367 RLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEF 1426
+ D TLF + L+V +YVDDI+ ST + E + + F
Sbjct: 1096 ------------KCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFF 1143
Query: 1427 EMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKED 1486
++ +GE KFFLGI+I ++ +G+ + Q KY +LL DCK + PM P LSK D
Sbjct: 1144 QLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSK-D 1202
Query: 1487 TGTVV-DQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGT 1545
TGT++ D K YR ++G L YL +RPDI F+V A++ S P + HL A+ +I RYLKGT
Sbjct: 1203 TGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGT 1262
Query: 1546 TNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTA 1605
GL Y ++ L GF D+D+ R+ + F+G +L+SW SK+Q ++MS+A
Sbjct: 1263 IGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSA 1322
Query: 1606 EAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIK 1664
EAEY + + +L+W+ + L ++I + +YCDN AA+ ++ N + H R KHIE
Sbjct: 1323 EAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIEND 1382
Query: 1665 HHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
H +R+ ++ GIL F+ T++Q AD TKPL + F
Sbjct: 1383 CHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPF 1419
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 529 bits (1362), Expect = e-150
Identities = 338/1067 (31%), Positives = 561/1067 (51%), Gaps = 67/1067 (6%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W +D+GCS HMT ++ F L GG V+ G K+ G GTI + + NV
Sbjct: 287 WVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNV 346
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F +GY +F N TL S+ +R +Y + + + +
Sbjct: 347 RYIPEMDRNLLSLGTFEKSGY--SFKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRPVTE 404
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA-LCGACQKGKI 843
+ + ++ D +WH+RLGH + K L L KGL + S C C GK
Sbjct: 405 ESL-SVVKRQDDTILWHRRLGHMS----QKNMDLLLKKGLLDKKKVSKLETCEDCIYGKA 459
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ F T LE +H DL+G P SL +Y + +DDY+R + F+K+KD
Sbjct: 460 KRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKD 518
Query: 903 YACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNG 962
A + F + ++++ + +I +R+D+G EF N F+ FC + GIL + TPQQNG
Sbjct: 519 EAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNG 578
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
V ER NRTL E R+M+ ++ L K FWAEA +T+ + N+ + + + + G+ P
Sbjct: 579 VAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSP 638
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVK 1082
SY +FGC ++ +T D K + +A++GI +GY K YK++ E + S +V
Sbjct: 639 IYSYLRRFGCIAFV-HTDD--GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVI 695
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSKKYTEVESSPEAEIT-----PEAES 1137
F +++ S S+DA + + + Y +++ E IT P E+
Sbjct: 696 F----------QENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEA 745
Query: 1138 NSEAEPSSKVQNEIASEDFLDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRS---HFR 1194
S PS + + +++ +IQ + +L+ +D RRT F
Sbjct: 746 QSPFNPSPATTQTYS--EGVNSETDIIQSPLSY------QLV---RDRDRRTIRAPVRFD 794
Query: 1195 QEESLIGLLSI------IEPKTVEEA---LSDDGWILAMQEELNQFQRNDVWDLVPKPSQ 1245
E+ L L IEP EA ++ + W LAM EE+ +N W +V +P
Sbjct: 795 DEDYLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQH 854
Query: 1246 KNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSY 1304
+ +IG++W+++ KL G E R KARLVA+GY+Q++GIDY E FAPV + +IR+L+S
Sbjct: 855 QKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSI 914
Query: 1305 AINHGIILYQMDVESAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAW 1364
+ L Q+DV++AFL+G ++E++Y+ P G+E++ D V L KSLYGLKQAP+ W
Sbjct: 915 VAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQW 974
Query: 1365 YDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI-VQIYVDDIIFGSTNASLCKEFSKLMQ 1423
++ + ++ + F R D+ + + L + + +YVDD++ + N + + +
Sbjct: 975 NEKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELS 1034
Query: 1424 DEFEMSMMGELKFFLGIQI--NQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHP--- 1478
F+M +G K LG++I N+ + +++ Q Y ++L+ + + + K + TP+
Sbjct: 1035 QRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLK 1094
Query: 1479 --TCTLSKEDTGTVVDQKL-YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTA 1534
T+ K++ + + Y +GS++Y + +RPD+ + V + +R+ S P H
Sbjct: 1095 MRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLG 1154
Query: 1535 VKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWAS 1594
VK + RY+KG+ L Y++S D+K++G+CDAD+A + R+S + LG + ISW S
Sbjct: 1155 VKWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKS 1214
Query: 1595 KRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPIL 1654
+Q +A+ST EAEY+S + +WMK L+++ S+ I+CD+ +AI LSKN +
Sbjct: 1215 GQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVH 1274
Query: 1655 HSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
H R KHI++++ +IRD + G D+ IDTE ADIFTK + V +F
Sbjct: 1275 HERTKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKF 1321
Score = 46.2 bits (108), Expect = 2e-04
Identities = 55/225 (24%), Positives = 102/225 (44%), Gaps = 20/225 (8%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELW--DILEDGVDDLDLDEEGAAIDRRIHTPAQ 88
KF+G + ++ WK + + I+GL L D L + V ++ L EE + + +
Sbjct: 10 KFDGRGD-YTMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEE----EEKEEVLRR 64
Query: 89 KKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLV 146
+ L +K K R IV S+ K+ + +A AM L K+ +KAL +
Sbjct: 65 ELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVL-------DKLYMSKALPNRIY 117
Query: 147 HQYEL--FRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTA 204
+ +L F+M ++ SIE F +++ L+ D +L SLP +
Sbjct: 118 QKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDT 177
Query: 205 IEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGK 249
++ TLS++++V+++ E+ L ++ S K ++ L K K
Sbjct: 178 LKYGLGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEK 222
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 528 bits (1360), Expect = e-149
Identities = 341/1119 (30%), Positives = 573/1119 (50%), Gaps = 82/1119 (7%)
Query: 626 QKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKA 685
++NK + SE+ V +V D L + + A +W LD+GCS HMT K
Sbjct: 269 ERNKQGSTSERGEASTVTARV-TDAAALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKD 327
Query: 686 LFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLKHNLLSISQF 740
+ G+V+ G + ++ G G + S+I + +V + + NL+S+
Sbjct: 328 WIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTL 387
Query: 741 CDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKWVW 800
D G K T+ D +T GK+ +Y + + LA + V + D+ +W
Sbjct: 388 EDKGCWFESKKGILTIFKNDLTVLT--GKKESTLYFLQGTTLAGEANV-IDKEKDETSLW 444
Query: 801 HKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPL 860
H RLGH + LQ++ ++D K + SF + V+ + L
Sbjct: 445 HSRLGHIGAK------GLQVLVSKGHLD-------------KNIMISFGAAKHVTKDK-L 484
Query: 861 ELLHIDLFGPVNTASLYGS-KYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQSEK 919
+ +H DL+G N G +Y + +DD++R TW+ FI++KD A F + TQI++++
Sbjct: 485 DYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQ 544
Query: 920 ELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMI 979
+ K+ + +D+G EF N+ F+ FC K G++ + TPQQNGV ER NRT+ R M+
Sbjct: 545 DKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCML 604
Query: 980 HENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNT 1039
E+ L K FWAEA +T+ ++ N+ + E + G P+ +FG YI +
Sbjct: 605 SESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSD 664
Query: 1040 KDYLKKFDAKAQRGIFLGYSERSKAYKVYNSETQCVEESMHVKFDDREPGSKTSEQSESN 1099
+ K + +A++GIFLGY + K +KV+ E + S + F + +
Sbjct: 665 QG---KLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRDIVFQENQM----------- 710
Query: 1100 AGTTDSEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFLDN 1159
++ ++D + K+ TEVE + A+ +++E E AS
Sbjct: 711 -----YKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQAS-----T 760
Query: 1160 TQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR-------QEESLIGLL-------SI 1205
T+ + K ++ ++ + + R R R +++SL+G +
Sbjct: 761 TRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEV 820
Query: 1206 IEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQ 1262
EP+T EEA+ + W A EE++ ++ND WD++ KP K +IG KW+F+ K
Sbjct: 821 YEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIP 880
Query: 1263 G-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAF 1321
G E R KARLVA+G+SQ+EGIDY E F+PV + +IR LLS + + L Q+DV++AF
Sbjct: 881 GVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAF 940
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
L+G ++E + + QP G+ED + V LKKSLYGLKQ+PR W R +F+I + ++R +
Sbjct: 941 LHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSK 1000
Query: 1382 VDTTLFRRTLKKDILI-VQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGI 1440
+ ++ + L I + +YVDD++ S N ++ + + EFEM +G + LG+
Sbjct: 1001 YNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKILGM 1060
Query: 1441 QINQSKE-GVY-VHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRG 1498
+I +++E G+ + Q++Y +L+ F ++ KV TP+ L + T+ Y
Sbjct: 1061 EITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLARDAEYMK 1120
Query: 1499 M------IGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLL 1551
+ IGS++Y + SRPD+ + V + +RF S P + H AVK + RY+KGT + L
Sbjct: 1121 LVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDTCLR 1180
Query: 1552 YRKSLDYKLIGFCDADYAGDRIERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYIS 1611
++K +++ G+CD+DYA D R+S + G N ISW S Q +A+ST EAEY++
Sbjct: 1181 FKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALSTTEAEYMA 1240
Query: 1612 AASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDY 1671
A + +W++ + +++ + CD+ +AI LSKN + H R KHI++++HFIR+
Sbjct: 1241 LAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVRYHFIREK 1300
Query: 1672 VQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ G + + I T ADIFTK + V + K L +
Sbjct: 1301 IADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRV 1339
Score = 53.9 bits (128), Expect = 8e-07
Identities = 72/313 (23%), Positives = 119/313 (38%), Gaps = 64/313 (20%)
Query: 28 SGKAP--KFNGDPEEFSWWKT-----NMYSFIMGLDEELWDILEDGVDDLDLDEEGAAID 80
SG+A KF+GD + W + M + GL EE ++ED ++ +G D
Sbjct: 3 SGRAEVEKFDGDGDYILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEIS---DGGNQD 59
Query: 81 RRIHTPA--QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVK 138
T K L +K K R I+ S+ K+ + TA M L F
Sbjct: 60 PETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPN 119
Query: 139 EAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRW 198
++ Y +M ++ ++EE + F L+S L+ +K D +L SLP ++
Sbjct: 120 RIYLKQRLYGY---KMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQF 176
Query: 199 RPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYK 258
++ K TL +E++ S++ +SK + L + GK+ K++
Sbjct: 177 DQLKETLKYCK--TTLHLEEITSAI--------------RSKILELGASGKLLKNNS--- 217
Query: 259 ASESEEESPDGDSDEDQSVKIAMLSNKLEYLARKQKKFLSKKGSYKNSKKEDQKG----C 314
DG +D+ + KG KN + KG C
Sbjct: 218 ---------DGLFVQDRG-----------------RSETRGKGPNKNKSRSKSKGAGKTC 251
Query: 315 FNCKKPGHFIADC 327
+ C K GHF C
Sbjct: 252 WICGKEGHFKKQC 264
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 520 bits (1340), Expect = e-147
Identities = 330/1038 (31%), Positives = 523/1038 (49%), Gaps = 53/1038 (5%)
Query: 710 GTGTIGNSSISINNVWLVDGLKHNLLSISQFCD-NGYDVTFSKTNCTLVNKDDKSITFKG 768
GT +G++ + I+ V+ V+ + +L+SI Q D N + S + ++ + + G
Sbjct: 305 GTVRLGSNLVMIS-VFYVEEFQSDLISIGQLMDENRCVLQMSDRFLVVQDRTSRMVMGAG 363
Query: 769 KRVENVYKINFSDLADQKVVCLLSMNDKKW-VWHKRLGHANWRLISKISKLQLVKGLPNI 827
+RV + +++A V +K + +WH R+GH R++S I + +
Sbjct: 364 RRVGGTFHFRSTEIAASVTV----KEEKNYELWHSRMGHPAARVVSLIPESSVSVS---- 415
Query: 828 DYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVD 887
H + C C + K ++SF I T R EL++ DL+GP T S G++Y L I+D
Sbjct: 416 STHLNKACDVCHRAKQTRNSFPLS-INKTLRIFELIYCDLWGPYRTPSHTGARYFLTIID 474
Query: 888 DYSRWTWVKFIKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHG 947
DYSR W+ + K A +F + +KI VRSD+G EF F ++ G
Sbjct: 475 DYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEFLC--LTKFFQEQG 532
Query: 948 ILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRP 1007
++HE S TP++N VERK+R L +AR + + NL FW E V T+ Y+ NR
Sbjct: 533 VIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTPSSV 592
Query: 1008 MLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYKV 1067
+ + T YE ++P + FG CY N KF +++R +F+GY K +++
Sbjct: 593 LNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRL 652
Query: 1068 YNSETQCVEESMHVKFDDREPGSKTSEQSE-------------------------SNAGT 1102
++ E S V F + E + S + NAG
Sbjct: 653 FDLEQNEFFVSRDVVFSELEFPFRISHEQNVIEEEEEALWAPIVDGLIEEEVHLGQNAGP 712
Query: 1103 TD----SEDASESDQPSDSKKYTEVESSPEAEITPEAESNSEAEPSSKVQNE-IASEDFL 1157
T S S S S S+ T E TP + S + PSS + +
Sbjct: 713 TPPICVSSPISPSATSSRSEHSTSSPLDTEVVPTPATSTTSASSPSSPTNLQFLPLSRAK 772
Query: 1158 DNTQQVIQPKF----KHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEE 1213
T Q + P + +S+ + + KD T L +L ++ +
Sbjct: 773 PTTAQAVAPPAVPPPRRQSTRNKAPPVTLKDFVVNTTVCQESPSKLNSILYQLQKRDDTR 832
Query: 1214 ALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLV 1273
S ++ + N W + P K IG++WV++ K N G V R KARLV
Sbjct: 833 RFSASH---TTYVAIDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARLV 889
Query: 1274 AQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVESAFLNGVIEEEVYVK 1333
A G Q+EG DY ETFAPVA++ +RL L A+ ++QMDV +AFL+G + EEVY+K
Sbjct: 890 ALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMK 949
Query: 1334 QPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKK 1393
PPGFE HP+ V +L+K+LYGLKQAPR W+++L+ L + F++ D +LF
Sbjct: 950 LPPGFE-ASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGS 1008
Query: 1394 DILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQ 1453
+ + IYVDD+I + ++F + + F M +G LK+FLGI++ +S G+Y+ Q
Sbjct: 1009 VRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTGIYICQ 1068
Query: 1454 TKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDI 1513
KY +++ + L K N P+ L + + D + YR ++G L+YL +R D+
Sbjct: 1069 RKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDL 1128
Query: 1514 LFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRI 1573
FSV + ARF +PRE H A R+ RYLK G+ R+S D+++ G+CD+D+AGD +
Sbjct: 1129 AFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDWAGDPM 1188
Query: 1574 ERKSTSENCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQI-N 1632
R+S + G++ ISW +K+Q T++ S+AEAEY + + ++LLW+K L + +
Sbjct: 1189 SRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSH 1248
Query: 1633 ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIF 1692
+ + CD+ +AI ++ NP+ H R KHIEI +HF+RD KG++ + + T Q ADIF
Sbjct: 1249 VQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIF 1308
Query: 1693 TKPLSVERFDFIKKNLNM 1710
TKPL + F + L +
Sbjct: 1309 TKPLGRDCFSAFRIKLGI 1326
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,207,825
Number of Sequences: 26719
Number of extensions: 1788675
Number of successful extensions: 7965
Number of sequences better than 10.0: 415
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 6377
Number of HSP's gapped (non-prelim): 1222
length of query: 1715
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1602
effective length of database: 8,299,349
effective search space: 13295557098
effective search space used: 13295557098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC138453.14