BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137825.4 - phase: 0 
         (161 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g24350 putative protein                                            117  2e-27
At4g24340 unknown protein                                             109  7e-25
At3g49970 putative protein                                             29  0.97
At5g41480 folylpolyglutamate synthase-like protein                     28  2.2
At4g15300 cytochrome P450 like protein                                 28  2.2
At5g38380 unknown protein                                              27  3.7
At3g16857 ARR1 protein, putative, 5' partial                           27  3.7
At5g51300 unknown protein                                              26  8.2
At1g26990 polyprotein, putative                                        26  8.2

>At4g24350 putative protein
          Length = 232

 Score =  117 bits (294), Expect = 2e-27
 Identities = 54/116 (46%), Positives = 74/116 (63%)

Query: 32  ISNINNEGPSIGIVVPNAYELNPLLHSSSFVPHNKFPYFDFAGRHFRIGELEKKKVIVVM 91
           I  +N  GP IG+V   A E N  L S  F P    P+ D +GR FRIG++  KKV+ V 
Sbjct: 38  IRKLNRGGPYIGLVTVIATEENAFLRSVDFRPDPTHPFLDLSGRRFRIGKIHGKKVVYVR 97

Query: 92  SGEGMLNAGLATQLLLTLFNIEGVLHYGIAGNLNSRFQIGDVTIPKYWAHTGLWHW 147
            G GM+N   ATQ ++ +FN++G++H+GIAGN+N+   IGDV+IPK   + GLW W
Sbjct: 98  CGRGMVNGAAATQQMIDVFNVKGIVHFGIAGNMNNSMSIGDVSIPKQITNAGLWDW 153


>At4g24340 unknown protein
          Length = 338

 Score =  109 bits (272), Expect = 7e-25
 Identities = 52/116 (44%), Positives = 73/116 (62%)

Query: 32  ISNINNEGPSIGIVVPNAYELNPLLHSSSFVPHNKFPYFDFAGRHFRIGELEKKKVIVVM 91
           I  IN  GP IG+V     E +  L S  F      P+ D +GR FRIG++  KKV+ V 
Sbjct: 43  IRKINRRGPYIGLVTVFETEEDAFLGSVDFRLDPTHPFLDLSGRRFRIGKIHGKKVVYVR 102

Query: 92  SGEGMLNAGLATQLLLTLFNIEGVLHYGIAGNLNSRFQIGDVTIPKYWAHTGLWHW 147
            G GM+NA  ATQ ++ +F+++G++H+GIAGN+N+   IGDV+IPK   + GLW W
Sbjct: 103 CGIGMVNAAAATQQMIDVFSVKGIVHFGIAGNINNSMSIGDVSIPKQITNAGLWDW 158


>At3g49970 putative protein
          Length = 526

 Score = 29.3 bits (64), Expect = 0.97
 Identities = 21/81 (25%), Positives = 35/81 (42%), Gaps = 1/81 (1%)

Query: 14  LGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHS-SSFVPHNKFPYFDF 72
           L   +YA+ A N      +SN ++  P+      +  EL+   +  S     N++   + 
Sbjct: 391 LSRDVYAHAAQNDRFQENLSNSDSPAPATAEKTLSPPELSSYKNELSKLNRENQYLKLEL 450

Query: 73  AGRHFRIGELEKKKVIVVMSG 93
                +  ELEK+K   VMSG
Sbjct: 451 LKVKMKFKELEKEKAFEVMSG 471


>At5g41480 folylpolyglutamate synthase-like protein
          Length = 530

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 15  GNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSSFVPHNKFPYFD-FA 73
           G S+  Y + + LS +E  + N E  S   +    Y + P+L  S    +    +F+   
Sbjct: 120 GYSVGCYSSPHILSIKERISCNGEPVSASTLNDLFYSVKPILEQSIQEENGSLSHFEILT 179

Query: 74  GRHFRIGELEKKKVIVVMSGEG 95
           G  F + E E   + V+ +G G
Sbjct: 180 GIAFSLFEKENVDIAVIEAGLG 201


>At4g15300 cytochrome P450 like protein
          Length = 487

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 14/37 (37%), Positives = 18/37 (47%), Gaps = 2/37 (5%)

Query: 124 LNSRFQIGDVTIPKYWAHTGLWHWQVHTSCFNYLDTF 160
           L   FQ+GD TIP  W   G  H  +H +   Y D +
Sbjct: 369 LEHDFQVGDYTIPAGWTFMGYPH--IHFNSEKYEDPY 403


>At5g38380 unknown protein
          Length = 361

 Score = 27.3 bits (59), Expect = 3.7
 Identities = 17/57 (29%), Positives = 35/57 (60%), Gaps = 3/57 (5%)

Query: 1   MEFLL-GVLVMIVLLGNSIYAYGAINQLSWREISNINNEGPSIGIVVPNAYELNPLL 56
           M+F L G +V  ++LG  I+   ++ +   ++ S++ +E PS GI+  N ++ +P+L
Sbjct: 305 MDFSLPGFIVCCLVLGFGIFEATSLERN--KKDSSLKSEDPSNGILGNNDFDTSPIL 359


>At3g16857 ARR1 protein, putative, 5' partial
          Length = 569

 Score = 27.3 bits (59), Expect = 3.7
 Identities = 15/43 (34%), Positives = 22/43 (50%)

Query: 25  NQLSWREISNINNEGPSIGIVVPNAYELNPLLHSSSFVPHNKF 67
           N++S R   +  N  P    V+P +Y      HSSS +P+N F
Sbjct: 371 NRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNF 413


>At5g51300 unknown protein
          Length = 804

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 17/59 (28%), Positives = 24/59 (39%), Gaps = 8/59 (13%)

Query: 24  INQLSWREISNINNEGPSIGIVV--------PNAYELNPLLHSSSFVPHNKFPYFDFAG 74
           IN   +R    +N E   I   +        P A    P LH   F+P  +FP ++F G
Sbjct: 201 INTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIG 259


>At1g26990 polyprotein, putative
          Length = 1436

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 40  PSIGIVVPNAYELNPLLHSSSFVPHN 65
           P I +  PN  E  PL+ SSS  PHN
Sbjct: 856 PHIYLPAPNNDEHLPLVQSSSDAPHN 881


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.324    0.142    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,799,314
Number of Sequences: 26719
Number of extensions: 158268
Number of successful extensions: 414
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 407
Number of HSP's gapped (non-prelim): 11
length of query: 161
length of database: 11,318,596
effective HSP length: 91
effective length of query: 70
effective length of database: 8,887,167
effective search space: 622101690
effective search space used: 622101690
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 56 (26.2 bits)