BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137823.12 + phase: 0 /pseudo
         (59 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g13930 chalcone synthase (naringenin-chalcone synthase) (test...    89  4e-19
At4g34850 chalcone synthase - like protein                             35  0.007
At4g00040 chalcone synthase like protein                               32  0.060
At5g16130 40S ribosomal protein S7-like                                27  2.5
At1g02050 unknown protein                                              26  3.3
At3g54500 unknown protein                                              26  4.3
At1g04700 putative Ser/Thr protein kinase                              25  7.3
At1g49380 unknown protein                                              25  9.5

>At5g13930 chalcone synthase (naringenin-chalcone synthase) (testa
          4 protein) (sp|P13114)
          Length = 395

 Score = 89.0 bits (219), Expect = 4e-19
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 3  SVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
          S+ EIR+AQRA+GPA ILAIGTANP N V Q+ YPD+YF+ITNSEH T+LKEKF+RM
Sbjct: 8  SLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRM 64


>At4g34850 chalcone synthase - like protein
          Length = 392

 Score = 35.0 bits (79), Expect = 0.007
 Identities = 21/45 (46%), Positives = 25/45 (54%), Gaps = 1/45 (2%)

Query: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
          G ATILA+G A P   V Q    D YFK T  +   ELK+K  R+
Sbjct: 18 GKATILALGKAFPHQLVMQEYLVDGYFKTTKCD-DPELKQKLTRL 61


>At4g00040 chalcone synthase like protein
          Length = 385

 Score = 32.0 bits (71), Expect = 0.060
 Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 3/61 (4%)

Query: 1  MVSVSEIRKAQRA--EGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQR 58
          M+  + + K +R   +G AT+LA+G A P+N V Q    + Y +    ++   +K+K Q 
Sbjct: 1  MLVSARVEKQKRVAYQGKATVLALGKALPSNVVSQENLVEEYLREIKCDN-LSIKDKLQH 59

Query: 59 M 59
          +
Sbjct: 60 L 60


>At5g16130 40S ribosomal protein S7-like
          Length = 190

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 13/32 (40%), Positives = 17/32 (52%)

Query: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKF 56
          A P  C EQ     F  + TN E K+ELK+ +
Sbjct: 14 AEPTECEEQVAQALFDLENTNQELKSELKDLY 45


>At1g02050 unknown protein
          Length = 395

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
          G AT+LA+G A P+  V Q    + + + T  +    +KEK + +
Sbjct: 24 GKATLLALGKAFPSQVVPQENLVEGFLRDTKCD-DAFIKEKLEHL 67


>At3g54500 unknown protein
          Length = 648

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 8   RKAQRAEGPATILAIGTA 25
           +KAQ+ EGPA  LA+G A
Sbjct: 607 QKAQKEEGPADSLALGNA 624


>At1g04700 putative Ser/Thr protein kinase
          Length = 1042

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 7/17 (41%), Positives = 17/17 (99%)

Query: 42  KITNSEHKTELKEKFQR 58
           +ITN++H++E++EK+++
Sbjct: 719 EITNADHESEMEEKYKK 735


>At1g49380 unknown protein
          Length = 547

 Score = 24.6 bits (52), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)

Query: 17  ATILAIGTANPANCVEQSTYPDFYFK 42
           A ++A+GT      +EQ   PDFYF+
Sbjct: 122 AALMALGTV-----IEQGETPDFYFQ 142


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.314    0.127    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,147,618
Number of Sequences: 26719
Number of extensions: 29397
Number of successful extensions: 68
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62
Number of HSP's gapped (non-prelim): 8
length of query: 59
length of database: 11,318,596
effective HSP length: 35
effective length of query: 24
effective length of database: 10,383,431
effective search space: 249202344
effective search space used: 249202344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)