BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137823.1 + phase: 0
(249 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15800 transcription factor (AGL2) 360 e-100
At3g02310 floral homeotic protein AGL4 352 1e-97
At1g24260 floral homeotic protein, AGL9 291 2e-79
At2g03710 MADS-box protein (AGL3) 259 9e-70
At2g45650 MADS-box protein (AGL6) 211 4e-55
At1g69120 unknown protein 183 9e-47
At1g26310 cauliflower (CAL) 179 9e-46
At5g60910 floral homeotic protein AGL8 177 5e-45
At3g61120 MADS-box protein AGL13 173 9e-44
At4g09960 MADS-box protein AGL11 166 1e-41
At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1) 160 6e-40
At2g45660 MADS-box protein (AGL20) 158 2e-39
At4g11880 MADS-box protein AGL14 156 9e-39
At4g18960 floral homeotic protein agamous 153 9e-38
At2g42830 MADS box transcription factor (AGL5) 153 9e-38
At4g37940 MADS-box protein AGL17 -like protein 149 1e-36
At2g14210 pseudogene 147 7e-36
At4g22950 putative MADS Box / AGL protein 146 1e-35
At5g62165 unknown protein 143 8e-35
At5g13790 floral homeotic protein AGL15 (sp|Q38847) 139 1e-33
>At5g15800 transcription factor (AGL2)
Length = 251
Score = 360 bits (924), Expect = e-100
Identities = 190/255 (74%), Positives = 218/255 (84%), Gaps = 10/255 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SNMLKTLDRYQKCSYGAVEV-SKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPL 119
SNMLKTLDRYQKCSYG++EV +KPAKELE+SYREYLKLK R+ENLQR QRNLLGEDLGPL
Sbjct: 61 SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEE-INSRN 178
+SK+LEQLERQLD SLKQVRS KTQ+MLDQL+DLQNKE ML+E NR+L++KL++ I R+
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180
Query: 179 HYR---QSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIGSDYRYNNVASDQIASTSQ 235
H+ WE +Q++ Y A A SQ +Q LECNPTLQ+G D N V S+QI +T+Q
Sbjct: 181 HHMGGGGGWEGGEQNVTY-AHHQAQSQGLYQPLECNPTLQMGYD---NPVCSEQITATTQ 236
Query: 236 AQ-QQVNGFVPGWML 249
AQ QQ NG++PGWML
Sbjct: 237 AQAQQGNGYIPGWML 251
>At3g02310 floral homeotic protein AGL4
Length = 250
Score = 352 bits (903), Expect = 1e-97
Identities = 185/253 (73%), Positives = 212/253 (83%), Gaps = 7/253 (2%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FS RGKLYEFCST
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60
Query: 61 SNMLKTLDRYQKCSYGAVEV-SKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPL 119
SNMLKTL+RYQKCSYG++EV +KPAKELE+SYREYLKLK R+ENLQR QRNLLGEDLGPL
Sbjct: 61 SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEE-INSRN 178
+SK+LEQLERQLD SLKQVR KTQ+MLDQL+DLQ KEH+L++ANR+LS+KLE+ I R+
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180
Query: 179 HY-RQSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIGSDYRYNNVASDQIASTSQAQ 237
H+ WE DQ AHSQ +Q LEC+PTLQIG + V S+Q+A T Q Q
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSH---PVCSEQMAVTVQGQ 237
Query: 238 -QQVNGFVPGWML 249
QQ NG++PGWML
Sbjct: 238 SQQGNGYIPGWML 250
>At1g24260 floral homeotic protein, AGL9
Length = 251
Score = 291 bits (745), Expect = 2e-79
Identities = 156/253 (61%), Positives = 189/253 (74%), Gaps = 14/253 (5%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKEL----ESSYREYLKLKQRFENLQRAQRNLLGEDL 116
S+ML+TL+RYQKC+YGA E + P++E SS +EYLKLK+R++ LQR QRNLLGEDL
Sbjct: 61 SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120
Query: 117 GPLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEE-IN 175
GPLS+K+LE LERQLDSSLKQ+R+ +TQFMLDQL DLQ+KE ML E N++L ++L +
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180
Query: 176 SRNHYRQSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIGSDYRYNNVASDQIASTSQ 235
+ E D ++ QQ HSQ+FFQ LEC P LQIG + + +
Sbjct: 181 MPLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQDGMG--------- 231
Query: 236 AQQQVNGFVPGWM 248
A VN ++ GW+
Sbjct: 232 AGPSVNNYMLGWL 244
>At2g03710 MADS-box protein (AGL3)
Length = 257
Score = 259 bits (662), Expect = 9e-70
Identities = 144/263 (54%), Positives = 188/263 (70%), Gaps = 20/263 (7%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFS RGKLYEFCS+
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 -SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPL 119
S M +T+D+Y+K SY ++ ++ AK+L+ Y++YLKLK R E LQ +QR+LLGE+L +
Sbjct: 61 PSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEM 120
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNH 179
+LE LERQ+D+SL+Q+RSTK + MLDQL+DL+ KE ML+E NR L KLE+ ++
Sbjct: 121 DVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAA-- 178
Query: 180 YRQSW---EASDQSMQYEAQQNAHSQ----------SFFQQLECNPTLQIGSDYRYNNVA 226
QS+ A++Q Q++ QQ S FF+ L+ N LQ+ S Y +N
Sbjct: 179 LTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQM-SHYNHNPAN 237
Query: 227 SDQIASTSQAQQQVNGFVPGWML 249
+ A+TS Q VNGF PGWM+
Sbjct: 238 ATNSATTS---QNVNGFFPGWMV 257
>At2g45650 MADS-box protein (AGL6)
Length = 252
Score = 211 bits (536), Expect = 4e-55
Identities = 123/254 (48%), Positives = 162/254 (63%), Gaps = 7/254 (2%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRVE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
+ T++RY +C ++ +KP + +S +E KLK ++E+L R RNLLGEDLG +
Sbjct: 61 -GIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 119
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLE-EINSRNH 179
K+L+ LERQL+++L R KTQ M++++ DL+ KE L + N+ L IK E E ++
Sbjct: 120 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKT 179
Query: 180 YRQSWEASDQSMQYEAQQNAH--SQSFFQQLECN--PTLQIGSDYRYNNVASDQIASTSQ 235
++ W S S+ + + S L+CN P LQIG Y S S
Sbjct: 180 FQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQGEGSSVSKSN 239
Query: 236 AQQQVNGFVPGWML 249
+ N FV GW+L
Sbjct: 240 VAGETN-FVQGWVL 252
>At1g69120 unknown protein
Length = 256
Score = 183 bits (464), Expect = 9e-47
Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 6/227 (2%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS +GKL+E+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSY-REYLKLKQRFENLQRAQRNLLGEDLGPL 119
S M K L+RY++ SY ++ P ++ +++ EY +LK + E L+R QR+ LGEDL +
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINS-RN 178
S K+L+ LE+QLD++LK +R+ K Q M + + +LQ KE + E N LS +++E
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180
Query: 179 HYRQSWEASDQSMQ----YEAQQNAHSQSFFQQLECNPTLQIGSDYR 221
++ W+ +Q QQ+ + + +P L +G Y+
Sbjct: 181 AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQ 227
>At1g26310 cauliflower (CAL)
Length = 255
Score = 179 bits (455), Expect = 9e-46
Identities = 104/227 (45%), Positives = 148/227 (64%), Gaps = 6/227 (2%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRVELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS +GKL+E+ S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYR---EYLKLKQRFENLQRAQRNLLGEDLG 117
S M K L+RY++ SY ++ P + + EY +LK + E L+R QR+ LGE+L
Sbjct: 61 SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120
Query: 118 PLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSR 177
P+S KDL+ LE+QL+++LK +RS K Q M + L LQ KE + E N L+ +++E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180
Query: 178 NHYRQS-WEASDQSMQ--YEAQQNAHSQSFFQQLECNPTLQIGSDYR 221
+Q+ E ++S+ + Q H + + +P L +G Y+
Sbjct: 181 LRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQ 227
>At5g60910 floral homeotic protein AGL8
Length = 242
Score = 177 bits (449), Expect = 5e-45
Identities = 105/250 (42%), Positives = 154/250 (61%), Gaps = 16/250 (6%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 SNMLKTLDRYQKCSYGAVE-VSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPL 119
S M + L+RY + Y + V + + E+ E+ KLK R E L++ +RN +GEDL L
Sbjct: 61 SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 120
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNH 179
S K+L+ LE QLD+++K +RS K Q M + ++ LQ K+ L + N SL K++E +
Sbjct: 121 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTG 180
Query: 180 YRQSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIGSDYRYNNVASDQIASTSQAQQQ 239
++ + Q ++S S C + + G R V + ++S +
Sbjct: 181 QQEG----------QLVQCSNSSSVLLPQYCVTSSRDGFVER---VGGENGGASSLTEP- 226
Query: 240 VNGFVPGWML 249
N +P WML
Sbjct: 227 -NSLLPAWML 235
>At3g61120 MADS-box protein AGL13
Length = 244
Score = 173 bits (438), Expect = 9e-44
Identities = 102/251 (40%), Positives = 150/251 (59%), Gaps = 15/251 (5%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG+VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFST GKLYEF S
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SN 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
+ +T++RY +C ++ + ++ + +E KLK ++E+L R RNL+GEDL +S
Sbjct: 60 VGVGRTIERYYRCKDNLLD-NDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMS 118
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSR--- 177
K+L+ LERQL+ +L R KTQ M++Q+ +L+ KE L + N L ++ E+ + +
Sbjct: 119 IKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ 178
Query: 178 ----NHYRQSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIGSDYRYNNVASDQIAST 233
N + ++D S+Q + Q++ LQIG Y + +
Sbjct: 179 DLLLNPVLTAGCSTDFSLQ------STHQNYISDCNLGYFLQIGFQQHYEQGEGSSVTKS 232
Query: 234 SQAQQQVNGFV 244
+ FV
Sbjct: 233 NARSDAETNFV 243
>At4g09960 MADS-box protein AGL11
Length = 230
Score = 166 bits (419), Expect = 1e-41
Identities = 92/207 (44%), Positives = 141/207 (67%), Gaps = 8/207 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSTRG+LYE+ +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-AN 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSY--REYLKLKQRFENLQRAQRNLLGEDLGP 118
+N+ T++RY+K + S +E+ ++Y +E KL+Q+ + +Q + RNL+G+ L
Sbjct: 60 NNIRSTIERYKKACSDSTNTS-TVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSS 118
Query: 119 LSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINS-R 177
LS K+L+Q+E +L+ ++ ++RS K + +L ++ + Q +E L N L K+ E+ +
Sbjct: 119 LSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQ 178
Query: 178 NHYRQSWEASD-QSMQYEAQQN--AHS 201
H+ Q S+ +++ A +N AHS
Sbjct: 179 QHHHQMVSGSEINAIEALASRNYFAHS 205
>At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1)
Length = 248
Score = 160 bits (405), Expect = 6e-40
Identities = 88/204 (43%), Positives = 131/204 (64%), Gaps = 2/204 (0%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
+GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFSTRG+LYE+ +
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSY-REYLKLKQRFENLQRAQRNLLGEDLGPL 119
S + T++RY+K AV + Y +E KL+++ ++Q + R+++GE LG L
Sbjct: 76 S-VRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 134
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNH 179
+ K+L+ LE +L+ + +VRS K + ++ ++ +Q +E L N L K+ E N
Sbjct: 135 NFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNP 194
Query: 180 YRQSWEASDQSMQYEAQQNAHSQS 203
+Q + YE+ ++H QS
Sbjct: 195 DQQESSVIQGTTVYESGVSSHDQS 218
>At2g45660 MADS-box protein (AGL20)
Length = 214
Score = 158 bits (400), Expect = 2e-39
Identities = 91/213 (42%), Positives = 133/213 (61%), Gaps = 4/213 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV+LIIFS +GKLYEF S
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS- 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREY--LKLKQRFENLQRAQRNLLGEDLGP 118
SNM T+DRY + + V +KP E + +Y + ++ E L+ ++R LLGE +G
Sbjct: 60 SNMQDTIDRYLRHTKDRVS-TKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 118
Query: 119 LSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRN 178
S ++L+Q+E+QL+ S+K +R+ KTQ +Q+ L+ KE L N LS K S
Sbjct: 119 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEV 178
Query: 179 HYRQSWEASDQSMQYEAQQNAHSQSFFQQLECN 211
++ E++ + + + + F L C+
Sbjct: 179 WSNKNQESTGRGDEESSPSSEVETQLFIGLPCS 211
>At4g11880 MADS-box protein AGL14
Length = 221
Score = 156 bits (395), Expect = 9e-39
Identities = 86/172 (50%), Positives = 116/172 (67%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
M RG+ E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S+
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
S++ KT++RYQK K + S E L ++ E+L+ + R ++GE L S
Sbjct: 61 SSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASS 120
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLE 172
++L+QLE QLD SL ++R+ K Q + ++ L+ KE L+ N+ L K E
Sbjct: 121 IEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCE 172
>At4g18960 floral homeotic protein agamous
Length = 284
Score = 153 bits (386), Expect = 9e-38
Identities = 84/180 (46%), Positives = 123/180 (67%), Gaps = 5/180 (2%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSTS 61
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S +
Sbjct: 50 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNN 108
Query: 62 NMLKTLDRYQKCSYGAVEVSKPAKELESSY--REYLKLKQRFENLQRAQRNLLGEDLGPL 119
++ T++RY+K A E+ + Y +E KL+Q+ ++Q + R L+GE +G +
Sbjct: 109 SVKGTIERYKKAISDNSNTGSVA-EINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSM 167
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNH 179
S K+L LE +L+ S+ ++RS K + + ++ +Q +E L N+ L K+ E N RN+
Sbjct: 168 SPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAE-NERNN 226
>At2g42830 MADS box transcription factor (AGL5)
Length = 246
Score = 153 bits (386), Expect = 9e-38
Identities = 90/206 (43%), Positives = 128/206 (61%), Gaps = 15/206 (7%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
+GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFSTRG+LYE+ +
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSY--REYLKLKQRFENLQRAQRNLLGEDLGP 118
S + T++RY+K AV E + Y +E KL+++ ++Q R++LGE LG
Sbjct: 76 S-VRGTIERYKKACSDAVN-PPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGS 133
Query: 119 LSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEE----- 173
L+ K+L+ LE +L+ + +VRS K + ++ ++ +Q +E L N L K+ E
Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQ 193
Query: 174 ------INSRNHYRQSWEASDQSMQY 193
I+ Y +S QS QY
Sbjct: 194 QQESSVIHQGTVYESGVTSSHQSGQY 219
>At4g37940 MADS-box protein AGL17 -like protein
Length = 228
Score = 149 bits (377), Expect = 1e-36
Identities = 81/208 (38%), Positives = 127/208 (60%), Gaps = 7/208 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG++ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F S
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFAS- 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
S+M +DRY K ++ PA E++ RE L+Q LQ R ++GE L LS
Sbjct: 60 SSMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLS 119
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRN-- 178
+L LE Q++ SL+ +R K Q + ++ +L K +++ + N LS K++ I+ N
Sbjct: 120 VNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVE 179
Query: 179 HYRQSWEASDQSMQYE----AQQNAHSQ 202
Y++++ A+ + A +H+Q
Sbjct: 180 LYKKAYMANTNGFTHREVAVADDESHTQ 207
>At2g14210 pseudogene
Length = 234
Score = 147 bits (370), Expect = 7e-36
Identities = 75/178 (42%), Positives = 116/178 (65%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG++ ++RI+N +RQVTF+KRR+GLLKKA ELS+LCDAEV +IIFS+ GKLY++ S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
S+M ++RY + ++ A E++ RE L+Q+ + LQ R L+GE+L ++
Sbjct: 61 SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRN 178
+ DL+ LE QL +SLK VR K Q M +++ +L K ++ + N L ++ + N
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKEN 178
>At4g22950 putative MADS Box / AGL protein
Length = 219
Score = 146 bits (368), Expect = 1e-35
Identities = 81/170 (47%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
M RG+ E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVAL+IFS R KLYEF S+
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEF-SS 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
S++ T++RYQ+ K + + E L ++ E L+ ++R LLGE + S
Sbjct: 60 SSIAATIERYQRRIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACS 119
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIK 170
++L+QLE QLD SL ++R+ K Q + +++ L+ +E LV+ N+ L K
Sbjct: 120 IEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>At5g62165 unknown protein
Length = 210
Score = 143 bits (361), Expect = 8e-35
Identities = 85/193 (44%), Positives = 128/193 (66%), Gaps = 8/193 (4%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
M RG++E+K+IEN +RQVTF+KRRNGLLKKAYELSVLCDA+++LIIFS RG+LYEF S+
Sbjct: 1 MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEF-SS 59
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAK-ELESSYREYLKLKQRFENLQRAQRNLLGEDLGPL 119
S+M KT++RY+K + + ++ L+ +E + + E L+ +R LLG+ +
Sbjct: 60 SDMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASC 119
Query: 120 SSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEINSRNH 179
S ++L++++ QL SL +VR K Q +QL L+ KE L+E N +KL + N N
Sbjct: 120 SLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEEN----VKLHQKNVINP 175
Query: 180 YRQSWEASDQSMQ 192
+R S ++DQ +
Sbjct: 176 WRGS--STDQQQE 186
>At5g13790 floral homeotic protein AGL15 (sp|Q38847)
Length = 268
Score = 139 bits (350), Expect = 1e-33
Identities = 91/221 (41%), Positives = 125/221 (56%), Gaps = 11/221 (4%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 60
MGRG++E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS GKL+E+ ST
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 SNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLS 120
M +TL RY S A + E E LK + LQ L G+ L PL+
Sbjct: 61 -GMKQTLSRYGN------HQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLT 113
Query: 121 SKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKLEEIN----S 176
K+L+ LE+QL +L VR K + + +QL + + KE N +L +++E+ S
Sbjct: 114 FKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQELRSFLPS 173
Query: 177 RNHYRQSWEASDQSMQYEAQQNAHSQSFFQQLECNPTLQIG 217
HY S+ A N S+ Q + + TLQ+G
Sbjct: 174 FTHYVPSYIKCFAIDPKNALINHDSKCSLQNTDSDTTLQLG 214
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.129 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,747,121
Number of Sequences: 26719
Number of extensions: 172324
Number of successful extensions: 920
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 747
Number of HSP's gapped (non-prelim): 175
length of query: 249
length of database: 11,318,596
effective HSP length: 97
effective length of query: 152
effective length of database: 8,726,853
effective search space: 1326481656
effective search space used: 1326481656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC137823.1