BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137669.5 + phase: 0 
         (58 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g50910 unknown protein                                              62  4e-11
At5g66480 unknown protein                                              55  7e-09
At5g03555 uracil transporter - like protein                            26  4.3
At5g65110 acyl-CoA oxidase (gb|AAC13497.1)                             25  5.6
At3g58640 unknown protein                                              25  7.3

>At3g50910 unknown protein
          Length = 447

 Score = 62.4 bits (150), Expect = 4e-11
 Identities = 25/42 (59%), Positives = 34/42 (80%)

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAGGES 42
           +ARRERQ++ K+Q+WIWGS+   I LG+AA+AWSY+PA   S
Sbjct: 398 VARRERQKRKKRQRWIWGSIAATITLGSAALAWSYIPAAKPS 439


>At5g66480 unknown protein
          Length = 444

 Score = 55.1 bits (131), Expect = 7e-09
 Identities = 20/39 (51%), Positives = 30/39 (76%)

Query: 1   MARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAG 39
           +ARR+ Q++ ++Q+WIWGS+   I LG+  +AWSYLP G
Sbjct: 390 VARRDGQKRKRRQRWIWGSIAATITLGSGVLAWSYLPPG 428


>At5g03555 uracil transporter - like protein
          Length = 502

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 19  SLTTVIALGTAAVAWSYLPAGG 40
           S   +I+L +  +AWSYL AGG
Sbjct: 193 SAPILISLTSCLLAWSYLKAGG 214


>At5g65110 acyl-CoA oxidase (gb|AAC13497.1)
          Length = 692

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 10/24 (41%), Positives = 14/24 (57%)

Query: 27  GTAAVAWSYLPAGGESYSAEDHPV 50
           GT  V WSYL     +Y ++ +PV
Sbjct: 500 GTLTVTWSYLRESMNTYLSQPNPV 523


>At3g58640 unknown protein
          Length = 809

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 23  VIALGTAAVAWSYLPAGGESYSAED 47
           +I L T A+  S++ A GES SAE+
Sbjct: 248 LIPLSTKAIFMSHISAAGESDSAEN 272


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.313    0.126    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,434,911
Number of Sequences: 26719
Number of extensions: 42539
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 5
length of query: 58
length of database: 11,318,596
effective HSP length: 34
effective length of query: 24
effective length of database: 10,410,150
effective search space: 249843600
effective search space used: 249843600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.6 bits)