BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136838.16 + phase: 1 /pseudo
(68 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15510 jasmonic acid regulatory protein like 33 0.034
At2g15880 unknown protein 30 0.22
At5g04810 membrane-associated salt-inducible protein-like 30 0.29
At1g52880 NAM-like protein 30 0.29
At1g49490 hypothetical protein 29 0.49
At3g04160 hypothetical protein 28 0.84
At4g33970 extensin-like protein 28 1.1
At4g11430 putative proline-rich protein 28 1.1
At4g14690 light induced protein like 27 1.4
At4g13340 extensin-like protein 27 1.4
At1g72790 unknown protein 27 1.9
At1g72110 unknown protein (At1g72110) 27 2.5
At5g44500 unknown protein 26 3.2
At3g19020 hypothetical protein 26 3.2
At3g07720 unknown protein 26 3.2
At1g31810 hypothetical protein 26 3.2
At2g27100 unknown protein 26 4.2
At1g26150 Pto kinase interactor, putative 26 4.2
At5g07750 putative protein 25 5.5
At4g32710 putative protein kinase 25 5.5
>At3g15510 jasmonic acid regulatory protein like
Length = 364
Score = 32.7 bits (73), Expect = 0.034
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 2 PPQPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLP 56
PPQPN PP F P D V +K SAP P+ I+++ L + F ++LP
Sbjct: 12 PPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDL----YKFDPWELP 63
>At2g15880 unknown protein
Length = 727
Score = 30.0 bits (66), Expect = 0.22
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP V+ P P V S PPP+H
Sbjct: 603 PPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVH 637
Score = 26.6 bits (57), Expect = 2.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP V+ P P V S PPP+H
Sbjct: 574 PPPVHSPPPPVYSPP-PPPVHSPPPPVHSPPPPVH 607
Score = 25.8 bits (55), Expect = 4.2
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP V+ P P + PPP++
Sbjct: 633 PPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPPVY 667
Score = 25.4 bits (54), Expect = 5.5
Identities = 14/38 (36%), Positives = 16/38 (41%), Gaps = 3/38 (7%)
Query: 2 PPQP---NSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP P PP V+ P P V S PPP+H
Sbjct: 520 PPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVH 557
>At5g04810 membrane-associated salt-inducible protein-like
Length = 952
Score = 29.6 bits (65), Expect = 0.29
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 35
PPQP PP++ RP K +GS S+P PI
Sbjct: 39 PPQPPEPPESPPDLRRPEK-SIGSSSSSSSPSPI 71
>At1g52880 NAM-like protein
Length = 320
Score = 29.6 bits (65), Expect = 0.29
Identities = 19/56 (33%), Positives = 27/56 (47%), Gaps = 5/56 (8%)
Query: 2 PPQPNSPPDNVFRP-DRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHFRCFQLP 56
PPQPN PP F P D + +K S P P+ I+ + L + F ++LP
Sbjct: 12 PPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDL----YKFDPWELP 63
>At1g49490 hypothetical protein
Length = 847
Score = 28.9 bits (63), Expect = 0.49
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP SPP VF P P+ V S PPP++
Sbjct: 596 PPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVY 630
Score = 26.6 bits (57), Expect = 2.5
Identities = 13/39 (33%), Positives = 18/39 (45%), Gaps = 10/39 (25%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISK 40
PP +SPP V+ P PT +PPP H ++
Sbjct: 619 PPPSHSPPPPVYSPPPPT----------FSPPPTHNTNQ 647
Score = 25.4 bits (54), Expect = 5.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 2 PPQPNSPPDNVFRPDRPTKV-----GLGSKKRGSAPPPIH 36
PP +SPP V+ P V + S S PPP+H
Sbjct: 553 PPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVH 592
>At3g04160 hypothetical protein
Length = 712
Score = 28.1 bits (61), Expect = 0.84
Identities = 14/37 (37%), Positives = 18/37 (47%)
Query: 3 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGIS 39
P PNS P+ FRP P + +PPPI +S
Sbjct: 22 PPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELS 58
>At4g33970 extensin-like protein
Length = 699
Score = 27.7 bits (60), Expect = 1.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 9/35 (25%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP VF P P S PPP+H
Sbjct: 562 PPPVHSPPPPVFSPPPPVY---------SPPPPVH 587
Score = 26.9 bits (58), Expect = 1.9
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 7/35 (20%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP V P P V S PPP+H
Sbjct: 583 PPPVHSPPPPVHSPPPPAPV-------HSPPPPVH 610
>At4g11430 putative proline-rich protein
Length = 219
Score = 27.7 bits (60), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
PP P PP + P T G +R PPP
Sbjct: 123 PPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPP 155
>At4g14690 light induced protein like
Length = 193
Score = 27.3 bits (59), Expect = 1.4
Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 1/37 (2%)
Query: 2 PPQ-PNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHG 37
PPQ P SPP V +P TK G G AP I+G
Sbjct: 64 PPQMPQSPPPPVSKPKVSTKFGDLLAFSGPAPERING 100
>At4g13340 extensin-like protein
Length = 760
Score = 27.3 bits (59), Expect = 1.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP P+SPP F P P S + PP H
Sbjct: 539 PPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPH 573
Score = 25.0 bits (53), Expect = 7.1
Identities = 11/35 (31%), Positives = 14/35 (39%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP P PP V+ P P AP P++
Sbjct: 499 PPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVY 533
Score = 25.0 bits (53), Expect = 7.1
Identities = 11/35 (31%), Positives = 14/35 (39%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP P PP V+ P P PPP++
Sbjct: 484 PPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVY 518
Score = 24.6 bits (52), Expect = 9.3
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 2 PPQPNSPPDNVF----RPDRPTKVGLGSKKRGSAPPP 34
PP P+SPP ++ P PT V +PPP
Sbjct: 575 PPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPP 611
>At1g72790 unknown protein
Length = 561
Score = 26.9 bits (58), Expect = 1.9
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
PP P PP F+ +K G K + PPP
Sbjct: 365 PPPPPPPPPPFFQGLFSSKKGKSKKNNSNPPPP 397
>At1g72110 unknown protein (At1g72110)
Length = 479
Score = 26.6 bits (57), Expect = 2.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 3 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKV 45
P P D+VF R K + KK P +G+ K+T++V
Sbjct: 332 PLGMKPQDDVFEYVRQAKTIMDGKKHSLEPLFSYGLLKVTMEV 374
>At5g44500 unknown protein
Length = 254
Score = 26.2 bits (56), Expect = 3.2
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 2 PPQPNSPPDNVFRPDRPTKV-GLGSKKRGSAPPPIHGI 38
PP P PP RP + G RG PPP HG+
Sbjct: 181 PPYPGPPPPQYGGQQRPMMIPPPGGMMRG--PPPPHGM 216
>At3g19020 hypothetical protein
Length = 951
Score = 26.2 bits (56), Expect = 3.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP VF P P + S PPP+H
Sbjct: 645 PPPVHSPPPPVFSP--PPPMHSPPPPVYSPPPPVH 677
Score = 25.8 bits (55), Expect = 4.2
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP + PP VF P P + PPP+H
Sbjct: 724 PPVQSPPPPPVFSPPPPAPI------YSPPPPPVH 752
Score = 25.0 bits (53), Expect = 7.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
PP +SPP V P P V S PPP+H
Sbjct: 748 PPPVHSPPPPVHSPP-PPPVHSPPPPVHSPPPPVH 781
>At3g07720 unknown protein
Length = 329
Score = 26.2 bits (56), Expect = 3.2
Identities = 14/48 (29%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
Query: 4 QPNSPPDN-VFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVVFHF 50
QP P DN ++ D T+ + G APPP G++ + +++ F
Sbjct: 43 QPRVPVDNQLYVFDLETQTWSIQEASGDAPPPRVGVAMAAVGPIIYFF 90
>At1g31810 hypothetical protein
Length = 1201
Score = 26.2 bits (56), Expect = 3.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
PP P + N +P P + S + G+ PPP
Sbjct: 685 PPPPKANISNAPKPPAPPPLPPSSTRLGAPPPP 717
>At2g27100 unknown protein
Length = 720
Score = 25.8 bits (55), Expect = 4.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPP 34
PPQ SPP +R D G RG PP
Sbjct: 104 PPQRRSPPQKRYRRDDNGYDGRRGSPRGGYGPP 136
>At1g26150 Pto kinase interactor, putative
Length = 760
Score = 25.8 bits (55), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1 VPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 35
V P P SPP+ P +P+ L S S+PP +
Sbjct: 253 VHPSPPSPPEETLPPPKPSPDPLPS--NSSSPPTL 285
Score = 25.4 bits (54), Expect = 5.5
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 2 PPQPNSPPDNVFRPDRPTKVG----LGSKKRGSAPPP 34
PPQP+ P DN P R G + S+PPP
Sbjct: 28 PPQPSFPGDNATSPTREPTNGNPPETTNTPAQSSPPP 64
Score = 25.0 bits (53), Expect = 7.1
Identities = 12/34 (35%), Positives = 16/34 (46%), Gaps = 1/34 (2%)
Query: 2 PPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPI 35
PP+P SPP PT + + S PPP+
Sbjct: 72 PPEP-SPPSPSLTGPPPTTIPVSPPPEPSPPPPL 104
>At5g07750 putative protein
Length = 1289
Score = 25.4 bits (54), Expect = 5.5
Identities = 14/38 (36%), Positives = 16/38 (41%), Gaps = 2/38 (5%)
Query: 2 PPQPNSPPDNVFR--PDRPTKVGLGSKKRGSAPPPIHG 37
PP P PP + P P G GS PPP +G
Sbjct: 956 PPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSYG 993
Score = 25.4 bits (54), Expect = 5.5
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 1 VPPQPNSPPDNVFRPDRPTKVGL-GSKKRGSAPPPIHG 37
+PP P PP + P P + G PPP+HG
Sbjct: 1009 IPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHG 1046
>At4g32710 putative protein kinase
Length = 731
Score = 25.4 bits (54), Expect = 5.5
Identities = 12/34 (35%), Positives = 17/34 (49%)
Query: 3 PQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIH 36
P ++PP N P P+ S + S PPPI+
Sbjct: 144 PSESTPPVNTASPPPPSPPRRRSGPKPSFPPPIN 177
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.142 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,914,243
Number of Sequences: 26719
Number of extensions: 75315
Number of successful extensions: 326
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 251
Number of HSP's gapped (non-prelim): 79
length of query: 68
length of database: 11,318,596
effective HSP length: 44
effective length of query: 24
effective length of database: 10,142,960
effective search space: 243431040
effective search space used: 243431040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)
Medicago: description of AC136838.16