BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136506.11 - phase: 0 /pseudo
         (1043 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g21080 putative protein                                            309  5e-84
At1g05960 unknown protein                                             277  3e-74
At2g41830 hypothetical protein                                        251  2e-66
At5g26850 unknown protein                                             250  3e-66

>At5g21080 putative protein
          Length = 980

 Score =  309 bits (792), Expect = 5e-84
 Identities = 145/216 (67%), Positives = 178/216 (82%)

Query: 1   MSVISRNIWPVCGSLCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEY 60
           M V+SR ++PVC SLCCFCPALR RSRHP+KRYK LLADIFPR+ +E+PNDRKI KLCEY
Sbjct: 1   MGVVSRTVFPVCESLCCFCPALRARSRHPVKRYKHLLADIFPRSQDEQPNDRKIGKLCEY 60

Query: 61  ASKNPLRVPKITSYLEQRCYKELRTENYQAVKVVICIYRKLLVSCRDQMPLFASSLLSII 120
           A+KNPLR+PKIT+ LEQRCYKELR E + +VK+V+ IY+KLLVSC +QM LFASS L +I
Sbjct: 61  AAKNPLRIPKITTSLEQRCYKELRMEQFHSVKIVMSIYKKLLVSCNEQMLLFASSYLGLI 120

Query: 121 QILLDQSRQDEVQILGCQTLFDFVNNQRDGTYMFNLDSFILKLCHLAQQVGDDGKVEHLR 180
            ILLDQ+R DE++ILGC+ L+DFV +Q +GTYMFNLD  I K+C LA ++G++    +L 
Sbjct: 121 HILLDQTRYDEMRILGCEALYDFVTSQAEGTYMFNLDGLIPKICPLAHELGEEDSTTNLC 180

Query: 181 ASGLQVLSSMVWFMGEFTHISVEFDNVSLASLVNSG 216
           A+GLQ LSS+VWFMGEF+HISVEFDNV    L N G
Sbjct: 181 AAGLQALSSLVWFMGEFSHISVEFDNVVSVVLENYG 216


>At1g05960 unknown protein
          Length = 982

 Score =  277 bits (708), Expect = 3e-74
 Identities = 129/214 (60%), Positives = 170/214 (79%)

Query: 1   MSVISRNIWPVCGSLCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEY 60
           M V+SR + P CG+LC FCP+LR RSRHP+KRYKK+LA+IFPR  E EPNDRKI KLCEY
Sbjct: 1   MGVMSRRVLPACGNLCFFCPSLRARSRHPVKRYKKMLAEIFPRNQEAEPNDRKIGKLCEY 60

Query: 61  ASKNPLRVPKITSYLEQRCYKELRTENYQAVKVVICIYRKLLVSCRDQMPLFASSLLSII 120
           AS+NPLR+PKIT YLEQ+CYKELR  N  +VKVV+CIY+KLL SC++QMPLF+ SLLSI+
Sbjct: 61  ASRNPLRIPKITEYLEQKCYKELRNGNIGSVKVVLCIYKKLLSSCKEQMPLFSCSLLSIV 120

Query: 121 QILLDQSRQDEVQILGCQTLFDFVNNQRDGTYMFNLDSFILKLCHLAQQVGDDGKVEHLR 180
           + LL+Q++++EVQILGC TL DF++ Q   ++MFNL+  I KLC LAQ++GDD +   LR
Sbjct: 121 RTLLEQTKEEEVQILGCNTLVDFISLQTVNSHMFNLEGLIPKLCQLAQEMGDDERSLQLR 180

Query: 181 ASGLQVLSSMVWFMGEFTHISVEFDNVSLASLVN 214
           ++G+Q L+ MV F+GE + +S++ D +    L N
Sbjct: 181 SAGMQALAFMVSFIGEHSQLSMDLDMIISVILEN 214


>At2g41830 hypothetical protein
          Length = 961

 Score =  251 bits (641), Expect = 2e-66
 Identities = 123/210 (58%), Positives = 154/210 (72%), Gaps = 18/210 (8%)

Query: 3   VISRNIWPVCGSLCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEYAS 62
           VISR + PVCGSLC  CPALR RSR P+KRYKKL+A+IFPR  EE  NDRKI KLCEYA+
Sbjct: 7   VISRQVLPVCGSLCILCPALRARSRQPVKRYKKLIAEIFPRNQEEGINDRKIGKLCEYAA 66

Query: 63  KNPLRVPK---ITSYLEQRCYKELRTENYQAVKVVICIYRKLLVSCRDQMPLFASSLLSI 119
           KN +R+PK   I+  LE RCYKELR EN+ + K+ +CIYR+LLV+C++Q+PLF+S  L  
Sbjct: 67  KNAVRMPKFFQISDSLEHRCYKELRNENFHSAKIAMCIYRRLLVTCKEQIPLFSSGFLRT 126

Query: 120 IQILLDQSRQDEVQILGCQTLFDFVNNQRDGTYMFNLDSFILKLCHLAQQVGDDGKVEHL 179
           +Q LLDQ+RQDE+QI+GCQ+LF+FV NQ               LC L  + GDD +   L
Sbjct: 127 VQALLDQTRQDEMQIVGCQSLFEFVINQ---------------LCQLGLEGGDDDRSRSL 171

Query: 180 RASGLQVLSSMVWFMGEFTHISVEFDNVSL 209
           RA+GLQ LS+M+W MGE++HI  EFDNV L
Sbjct: 172 RAAGLQALSAMIWLMGEYSHIPSEFDNVLL 201


>At5g26850 unknown protein
          Length = 970

 Score =  250 bits (638), Expect = 3e-66
 Identities = 114/207 (55%), Positives = 156/207 (75%)

Query: 1   MSVISRNIWPVCGSLCCFCPALRERSRHPIKRYKKLLADIFPRTPEEEPNDRKISKLCEY 60
           M  ISRN++P C S+C  CPALR RSR P+KRYKKLL +IFP++P+  PN+RKI KLCEY
Sbjct: 1   MGFISRNVFPACESMCICCPALRSRSRQPVKRYKKLLGEIFPKSPDGGPNERKIVKLCEY 60

Query: 61  ASKNPLRVPKITSYLEQRCYKELRTENYQAVKVVICIYRKLLVSCRDQMPLFASSLLSII 120
           A+KNP+R+PKI  +LE+RCYK+LR+E  + + +V   Y K+L  C+DQM  FA+SLL+++
Sbjct: 61  AAKNPIRIPKIAKFLEERCYKDLRSEQMKFINIVTEAYNKMLCHCKDQMAYFATSLLNVV 120

Query: 121 QILLDQSRQDEVQILGCQTLFDFVNNQRDGTYMFNLDSFILKLCHLAQQVGDDGKVEHLR 180
             LLD S+QD   ILGCQTL  F+ +Q DGTY  +++ F LK+C LA++ G++ + + LR
Sbjct: 121 TELLDNSKQDTPTILGCQTLTRFIYSQVDGTYTHSIEKFALKVCSLAREEGEEHQKQCLR 180

Query: 181 ASGLQVLSSMVWFMGEFTHISVEFDNV 207
           ASGLQ LS+MVW+MGEF+HI    D +
Sbjct: 181 ASGLQCLSAMVWYMGEFSHIFATVDEI 207


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.361    0.161    0.605 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,044,240
Number of Sequences: 26719
Number of extensions: 768753
Number of successful extensions: 2987
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2981
Number of HSP's gapped (non-prelim): 4
length of query: 1043
length of database: 11,318,596
effective HSP length: 109
effective length of query: 934
effective length of database: 8,406,225
effective search space: 7851414150
effective search space used: 7851414150
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.9 bits)
S2: 65 (29.6 bits)