BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136504.6 - phase: 0 /pseudo
(417 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35920 unknown protein 365 e-101
At2g17780 hypothetical protein 322 2e-88
At5g42340 arm repeat containing protein 35 0.059
At3g46510 arm repeat containing protein homolog 33 0.29
At1g63300 hypothetical protein 33 0.29
At1g27910 unknown protein 33 0.29
At5g41140 putative protein 32 0.50
At1g72250 kinesin, putative 32 0.65
At2g28830 unknown protein 31 1.1
At1g67530 unknown protein 30 1.9
At4g21070 putative protein (fragment) 30 2.5
At3g51560 disease resistance-like protein 30 3.2
At2g43190 unknown protein 29 4.2
At1g76120 unknown protein 29 4.2
At1g15910 29 4.2
At3g58290 putative protein 29 5.5
At4g31630 putative protein 28 7.2
At3g45190 putative protein 28 7.2
At1g68790 putative nuclear matrix constituent protein 1 (NMCP1) 28 7.2
At4g26130 uncharacterized protein 28 9.4
>At4g35920 unknown protein
Length = 421
Score = 365 bits (938), Expect = e-101
Identities = 204/347 (58%), Positives = 238/347 (67%), Gaps = 20/347 (5%)
Query: 1 MASSWEQFGEIANVAQLTGLDAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQL 60
M+ SW+ GEIA+VAQLTGLDAVKLIG+IVKAANTA MHKKNCRQFAQHLKLIGNLL+QL
Sbjct: 1 MSHSWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQL 60
Query: 61 KISELKKYPETREPLEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDR 120
KISE+KKYPETREPLE LEDALRRSY+LVNSC+DRSYLYLLAMGWNIVYQFRK Q+EIDR
Sbjct: 61 KISEMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDR 120
Query: 121 YLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLK 180
+L+++PLITLVDNAR +RER E I++DQ YTLD+ED+ VQ V +K E +E VLK
Sbjct: 121 FLKIIPLITLVDNAR---IRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLK 177
Query: 181 KTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVTNFAAYSLPE-- 238
KTLSCSYPN F EALK ENEKLQ+EL SQ + D+ QCE IQRL+ VT AA P+
Sbjct: 178 KTLSCSYPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSE 237
Query: 239 --------KLSPEDNYQIVEYSNNSHSDANGSKGHSSNEKHHKKKPKFQKRIRCQLEVHI 290
K S + EYS + S S +S + R H
Sbjct: 238 KELTKKASKKSERSSSMKTEYSYDEDSPKKSSTRAASRSTSNVSSGHDLLSRRASQAQHH 297
Query: 291 SRKIGILIYLLVVLNLIFIFSFAGIKTFFYPCGTFSKIATVATNRPI 337
L+ +L F KTFF+PCGT +KIAT A+NR I
Sbjct: 298 EEWHTDLLACCSEPSLCF-------KTFFFPCGTLAKIATAASNRHI 337
>At2g17780 hypothetical protein
Length = 417
Score = 322 bits (825), Expect = 2e-88
Identities = 192/355 (54%), Positives = 231/355 (64%), Gaps = 44/355 (12%)
Query: 1 MASSWEQFGEIANVAQLTGLDAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQL 60
MA+SW+Q GEIA+VAQLTG+DA+KLIGMIV AANTARMHKKNCRQFA HLKLI NLL+Q+
Sbjct: 1 MANSWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQI 60
Query: 61 KISELKKYPETREPLEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDR 120
K SE+ + E EPL+ L+DALRRSYILV SCQ++SYLYLLAMGWNIV QF KAQNEID
Sbjct: 61 KNSEMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDL 120
Query: 121 YLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKE-DTVVL 179
+L++VPLI + DNA R+RERLE IE+DQ YTLD+ED+KVQ V +K E +E T VL
Sbjct: 121 FLKIVPLINMADNA---RIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVL 177
Query: 180 KKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDINQCEFIQRLLDVTNFAAYSLP-- 237
KKTLS SYPN F EALK E EKLQLEL S+A D +QCE IQRL+DVT AA P
Sbjct: 178 KKTLSRSYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATVEPNL 237
Query: 238 -------EKLSP----EDNYQIVEYS--NNSHSDANGSKGHS--SNEKHHKKKPKFQKRI 282
E+L+ +D Y S +S S + S GH S + +
Sbjct: 238 EKVLTKKEELTSSKKRDDLYDTDSSSIRADSRSTSYVSSGHELLSGRSLQHRGNWHADLL 297
Query: 283 RCQLEVHISRKIGILIYLLVVLNLIFIFSFAGIKTFFYPCGTFSKIATVATNRPI 337
C E + +KT F+PCGT +KI+TVAT+R I
Sbjct: 298 DCCSEPCLC-----------------------LKTLFFPCGTLAKISTVATSRQI 329
>At5g42340 arm repeat containing protein
Length = 656
Score = 35.4 bits (80), Expect = 0.059
Identities = 31/164 (18%), Positives = 70/164 (41%), Gaps = 6/164 (3%)
Query: 21 DAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLEQLED 80
D V ++ + + R +K C + LK++ LD+++ E P + L +L
Sbjct: 52 DIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFLDEIRGFE---SPSCKHFLNRLRK 108
Query: 81 ALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARA-TRV 139
+ L+ +C + S +Y+ G ++ +F +++R L P L+ + A +
Sbjct: 109 VFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEI 168
Query: 140 RERLEVIEKDQCAYTLDDEDQKV--QTVFMKPEHDKEDTVVLKK 181
+ ++K + D + V VF K + D+ ++++
Sbjct: 169 DSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAIIER 212
>At3g46510 arm repeat containing protein homolog
Length = 660
Score = 33.1 bits (74), Expect = 0.29
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 40 KKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLEQLEDALRRSYILVNSCQDRSYLY 99
KK C A+ LKL+ + ++++ S +T + L L++A+ + + C S +Y
Sbjct: 30 KKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIY 89
Query: 100 LLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVI 146
L+ + + + ++++ L +P L + VRE++E++
Sbjct: 90 LVMEREQVTSKLMEVSVKLEQSLSQIPYEEL---DISDEVREQVELV 133
>At1g63300 hypothetical protein
Length = 1029
Score = 33.1 bits (74), Expect = 0.29
Identities = 53/261 (20%), Positives = 95/261 (36%), Gaps = 26/261 (9%)
Query: 15 AQLTGLDAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREP 74
A L+ L+ L IVK ++ + Q + ++ K+S+ +K
Sbjct: 304 ADLSELELQSLRKQIVKETKRSQDLLREVNSLKQERDSLKEDCERQKVSDKQKGETKTRN 363
Query: 75 LEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNA 134
Q E R ++L+ ++ Y +N+ Q K Q + V + +
Sbjct: 364 RLQFEG--RDPWVLLEETREELD-YEKDRNFNLRLQLEKTQESNSELILAVQDLEEMLEE 420
Query: 135 RATRVRERLEVIEKDQCAYTLD--DEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFSF 192
++ + +E + C D D DQK +K D +DT +L++ ++ Y
Sbjct: 421 KSKEGADNIEESMRRSCRSETDEDDHDQKALEDLVKKHVDAKDTHILEQKITDLYNEIEI 480
Query: 193 ------------------TEALKKENEKLQLELHHSQANMDIN-QCEFIQRLLDVTNFAA 233
E LK++N + +L SQ + Q E L+DVT
Sbjct: 481 YKRDKDELEIQMEQLALDYEILKQQNHDISYKLEQSQLQEQLKIQYECSSSLVDVTELE- 539
Query: 234 YSLPEKLSPEDNYQIVEYSNN 254
+ E L E Q E+S +
Sbjct: 540 -NQVESLEAELKKQSEEFSES 559
>At1g27910 unknown protein
Length = 768
Score = 33.1 bits (74), Expect = 0.29
Identities = 29/134 (21%), Positives = 63/134 (46%), Gaps = 11/134 (8%)
Query: 32 AANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLE---QLEDALRRSYIL 88
A A++H K C + I ++ L+ + P ++ ++ L L + +
Sbjct: 12 APGDAKLHGKMCNALSVIYCKIMSIFPSLEAAR----PRSKSGIQALCSLHVVLEKVKNI 67
Query: 89 VNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVIEK 148
+ C + S LYL G ++V +F KA++ + LR V +V + +++ E L +E
Sbjct: 68 LRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVE--DIVQQSIGSQLLEIL--MEL 123
Query: 149 DQCAYTLDDEDQKV 162
+ ++LD ++++
Sbjct: 124 ENTEFSLDPAEKEI 137
>At5g41140 putative protein
Length = 983
Score = 32.3 bits (72), Expect = 0.50
Identities = 44/220 (20%), Positives = 85/220 (38%), Gaps = 16/220 (7%)
Query: 7 QFGEIANVAQLTGLDAVKLIGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELK 66
+ G +A L+ L+ L IVK ++ + Q L+ + K S+ +
Sbjct: 298 ELGALARRTDLSELELQSLRKQIVKETKRSQDLLREVTSLKQERDLLKADNESNKASDKR 357
Query: 67 KYPETREPLEQLEDALRRSYILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVP 126
K QLE R ++L+ ++ Y + N+ Q +K Q + V
Sbjct: 358 KEEAKIRNKLQLEG--RDPHVLLEETREELD-YEKDLNSNLRLQLQKTQESNTELILAVQ 414
Query: 127 LITLVDNARATRV---------RERLEVIEKDQC-AYTLDDEDQKVQTVFMKPEHDKEDT 176
+ ++ R + E + C + T DDEDQK +K D ++
Sbjct: 415 DLEAMEGQRTKKTVDLPGPRTCERNTEESRRMSCTSETDDDEDQKALDELVKGHMDAKEA 474
Query: 177 VVLKKTLSCSYPNFSFTEALKKENEKLQLELHHSQANMDI 216
VL++ ++ Y E K++ E L++++ + +I
Sbjct: 475 HVLERRITDLYNEI---EIYKRDKEDLEIQVEQLSLDYEI 511
>At1g72250 kinesin, putative
Length = 1195
Score = 32.0 bits (71), Expect = 0.65
Identities = 27/142 (19%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 28 MIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETRE---PLEQLEDALRR 84
++ +A A + +C Q + ++ + ++++LK+ +K E E L ++++ L R
Sbjct: 338 LVCRAEEEAEGMRSDCEQQRKEMEDMKRMVEELKLENQQKTRECEEALNSLSEIQNELMR 397
Query: 85 SYILVNSC-----QDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRV 139
+ V S +++ L++ I + K E Y LV I + +RV
Sbjct: 398 KSMHVGSLGTSQREEQMVLFIKRFDKKIEVEQIKLLEEATTYKHLVQDINEFSSHIQSRV 457
Query: 140 RERLEVIEKDQCAYTLDDEDQK 161
++ E+ E + + ++++K
Sbjct: 458 KQDAELHENLKVKFVAGEKERK 479
>At2g28830 unknown protein
Length = 654
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/121 (18%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 26 IGMIVKAANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLEQLEDALRRS 85
I I +++ KK+C ++ L L+ +L++++ ++ + E L ++ +L +
Sbjct: 17 INEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQ-ESSSEVVNALLSVKQSLLHA 75
Query: 86 YILVNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEV 145
L++ S +YL+ ++ +F+K + +++ L ++P L + ++E++E+
Sbjct: 76 KDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENL---EISDELKEQVEL 132
Query: 146 I 146
+
Sbjct: 133 V 133
>At1g67530 unknown protein
Length = 782
Score = 30.4 bits (67), Expect = 1.9
Identities = 29/135 (21%), Positives = 68/135 (49%), Gaps = 13/135 (9%)
Query: 32 AANTARMHKKNCRQFAQHLKLIGNLLDQLKISELKKYPETREPLE---QLEDALRRSYIL 88
AA+ A++H C++ + L + ++ L+ + P ++ ++ L AL ++ +
Sbjct: 12 AASDAKLHGDMCKELSGVLCKVLSIFPSLEGAR----PRSKSGIQALCSLHIALEKAKNI 67
Query: 89 VNSCQDRSYLYLLAMGWNIVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVI-E 147
+ C + S LYL G ++ +F KA+ + L+ V +V ++ +++ LE++ E
Sbjct: 68 LQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVE--DIVPSSIGSQI---LEIVGE 122
Query: 148 KDQCAYTLDDEDQKV 162
+ + LD +++V
Sbjct: 123 LENTRFMLDPSEKEV 137
>At4g21070 putative protein (fragment)
Length = 1495
Score = 30.0 bits (66), Expect = 2.5
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 203 LQLELHHSQANMDI-NQCEFIQRLLDVTNFAAYSLPEKLSPEDNYQIVEYSNNSHSDANG 261
LQLE +HS + + N QR DV L + + + +VE N H G
Sbjct: 419 LQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMG 478
Query: 262 SKGHSSNEKHHKKKPKFQKRIRCQ 285
K H ++ + K + R+R +
Sbjct: 479 DKSHPQSDAIYAKLKEMTGRLRSE 502
>At3g51560 disease resistance-like protein
Length = 1253
Score = 29.6 bits (65), Expect = 3.2
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 5 WEQFGEIANVAQLTGLDAVKLIGM----------IVKAANTARMHKKNCRQFAQHLKLIG 54
WE E+ + ++ + +L+G+ ++ AR+ + QHL++I
Sbjct: 585 WEGTKELGMLKRIMLCHSQQLVGIQELQIALNMEVIDLQGCARLQRFLATGHFQHLRVI- 643
Query: 55 NLLDQLKISELKKYPETREPLEQLEDALRRSYILVNSCQDRSYLY 99
NL +KI + P E L + +R + S QD S++Y
Sbjct: 644 NLSGCIKIKSFPEVPPNIEELYLKQTGIRSIPTVTFSPQDNSFIY 688
>At2g43190 unknown protein
Length = 296
Score = 29.3 bits (64), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (48%)
Query: 244 DNYQIVEYSNNSHSDANGSKGHSSNEKHHKKKPKFQKRIRCQLEVHISRKI 294
DNY +++ S S A+GSK S + K KR++ +HI + +
Sbjct: 134 DNYILLDNFVQSRSSASGSKKASQKDSKRSKSRMSMKRLKKSGALHIPKDL 184
>At1g76120 unknown protein
Length = 463
Score = 29.3 bits (64), Expect = 4.2
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 146 IEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSC---SYPNFSFTEALKKENEK 202
I++D C + + KV++ F E +KE + LSC SY +FT K ++
Sbjct: 238 IQEDSCKLNTNSSETKVKSKFCYGEKEKER---FSRILSCYVGSYNFHNFTTRTKADDPT 294
Query: 203 LQLELHHSQANMDIN 217
++ AN IN
Sbjct: 295 ANRQIISFTANTVIN 309
>At1g15910
Length = 634
Score = 29.3 bits (64), Expect = 4.2
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 107 IVYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEVIEKDQCAYTLDDEDQKVQTVF 166
I+Y K NE+DR +R + R + +EK + LD +
Sbjct: 316 ILYDKEKLSNELDRKMR--------------DLESRAKQLEKHEALTELDRQ-------- 353
Query: 167 MKPEHDKEDTVVLKKTLSCSYPNFSFTEALKKENEKLQL-ELHHSQANMDINQCEFIQRL 225
K + DK + + K+L + E K + L+L E H Q +N+ +++
Sbjct: 354 -KLDEDKRKSDAMNKSL-----QLASREQKKADESVLRLVEEHQRQKEDALNKILLLEKQ 407
Query: 226 LDVTNFAAYSLPEKLSPEDNYQIVEYSNNSHSDANGSKGHSSNEKHHKKKPKFQ 279
LD + E + Q++++ + +A K N++ KK + +
Sbjct: 408 LDTKQTLEMEIQEL---KGKLQVMKHLGDDDDEAVQKKMKEMNDELDDKKAELE 458
>At3g58290 putative protein
Length = 282
Score = 28.9 bits (63), Expect = 5.5
Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 141 ERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLKKTLSCSYPNFSFTEALKKEN 200
E E + Q A DD + + + E DK+D V+ K + + + +++
Sbjct: 145 ETFEAVSTSQVAAVRDDSEWTLLGYYSSSEEDKDDVTVVVKGFHVLDSQVNQVKEIFEKH 204
Query: 201 EKLQLELHHSQANMDINQCEFIQRLLDVTNFAAYSLPEKLSPEDNYQIVEYSNNSHSDAN 260
L L N+ F+ L+ + LP++L+ ED + +++++ SD
Sbjct: 205 PDLATNLVLKNQNLKNVYMGFLLDLIKTLS----KLPKELTEED----LNFADSTLSDLT 256
Query: 261 GSKGHSSNEKHHKKKPKFQKRIRC 284
+ G + K +K+I C
Sbjct: 257 NA-GFMLDWLRLKLNRALEKQIAC 279
>At4g31630 putative protein
Length = 512
Score = 28.5 bits (62), Expect = 7.2
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 108 VYQFRKAQNEIDRYLRLVPLITLVDNARATRVRERLEV-------IEKDQCAYTLDDEDQ 160
+ +F+ Q+ I L+L P + + +++ R++ V IE + C+ T+
Sbjct: 246 ICRFKLVQSGIKPVLQLCPNASSIPEGNSSKARKKRNVSEIEGDEIESENCSETIPLNQN 305
Query: 161 KVQTVFMKP 169
K+ T +KP
Sbjct: 306 KILTFDLKP 314
>At3g45190 putative protein
Length = 774
Score = 28.5 bits (62), Expect = 7.2
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 367 EDDEHSEWR----------EVQIRGVYGMTSSSIFLKHCHIENVYLSKFLIYFVRVLAKN 416
E+++ EW E R V G TS F+ CH + +S+ Y V +L+ N
Sbjct: 413 ENNDWGEWEANTLHDRNAVENVYRWVCGYTSDQTFMASCHTIDATISRLAQYLVPILSLN 472
>At1g68790 putative nuclear matrix constituent protein 1 (NMCP1)
Length = 1085
Score = 28.5 bits (62), Expect = 7.2
Identities = 28/96 (29%), Positives = 48/96 (49%), Gaps = 7/96 (7%)
Query: 133 NARATRVRERLEVIEKDQCAYTLDDEDQKVQTVFMKPEHDKEDTVVLK-KTLSCSYPNFS 191
N R RV E IEK + L++ QK+ +V +KE+++ +K +S +F
Sbjct: 265 NHREERVMENERTIEKKE--KILENLQQKI-SVAKSELTEKEESIKIKLNDISLKEKDF- 320
Query: 192 FTEALKKENEKLQLELHHSQANMDINQCEFIQRLLD 227
EA+K + + + ELH + N+ + I +LLD
Sbjct: 321 --EAMKAKVDIKEKELHEFEENLIEREQMEIGKLLD 354
>At4g26130 uncharacterized protein
Length = 286
Score = 28.1 bits (61), Expect = 9.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 253 NNSHSDANGSKGHSSNEKHHKKKPKFQKRIR 283
+N H D GS GH N+ + P R++
Sbjct: 40 HNQHQDGYGSSGHDQNQARFGRPPSLIDRVK 70
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.325 0.139 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,929,369
Number of Sequences: 26719
Number of extensions: 375431
Number of successful extensions: 1677
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1661
Number of HSP's gapped (non-prelim): 27
length of query: 417
length of database: 11,318,596
effective HSP length: 102
effective length of query: 315
effective length of database: 8,593,258
effective search space: 2706876270
effective search space used: 2706876270
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC136504.6