BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.8 + phase: 0
(182 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810 ACTIN 2/7 (sp|P53492) 296 4e-81
At3g12110 unknown protein 295 1e-80
At5g59370 actin 4 293 3e-80
At3g46520 actin 12 293 3e-80
At3g53750 actin (ACT3) 293 3e-80
At2g37620 actin 3 293 3e-80
At1g49240 actin 11 like protein 287 2e-78
At3g18780 actin 2 286 6e-78
At2g42100 putative actin 249 4e-67
At2g42090 putative actin 206 4e-54
At3g27000 actin related protein, putative 150 5e-37
At1g13180 actin-like protein 119 1e-27
At1g18450 unknown protein 115 2e-26
At1g73910 actin-related protein 5 (ARP5) 96 1e-20
At3g60830 actin - like protein 79 2e-15
At3g33520 actin like protein 72 2e-13
At5g56180 putative protein 32 0.25
At1g16690 Unknown protein 30 0.94
At3g30790 hypothetical protein 27 4.6
At3g05750 hypothetical protein 27 6.1
>At5g09810 ACTIN 2/7 (sp|P53492)
Length = 377
Score = 296 bits (758), Expect = 4e-81
Identities = 143/146 (97%), Positives = 144/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFNVPAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
>At3g12110 unknown protein
Length = 377
Score = 295 bits (754), Expect = 1e-80
Identities = 142/146 (97%), Positives = 143/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYA 146
>At5g59370 actin 4
Length = 377
Score = 293 bits (751), Expect = 3e-80
Identities = 141/146 (96%), Positives = 143/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYA 146
>At3g46520 actin 12
Length = 377
Score = 293 bits (751), Expect = 3e-80
Identities = 141/146 (96%), Positives = 143/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYA 146
>At3g53750 actin (ACT3)
Length = 377
Score = 293 bits (750), Expect = 3e-80
Identities = 140/146 (95%), Positives = 143/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYA 146
>At2g37620 actin 3
Length = 377
Score = 293 bits (750), Expect = 3e-80
Identities = 140/146 (95%), Positives = 143/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLV DNGTGMVKAGFAGDDAPRAVFPSI+GRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYA 146
>At1g49240 actin 11 like protein
Length = 377
Score = 287 bits (735), Expect = 2e-78
Identities = 136/146 (93%), Positives = 142/146 (97%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MADA+DIQP+V DNGTGMVKAGFAGDDAPRAVFPS++GRPRH GVMVGM QKDAYVGDEA
Sbjct: 1 MADADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYA 146
>At3g18780 actin 2
Length = 377
Score = 286 bits (731), Expect = 6e-78
Identities = 135/146 (92%), Positives = 142/146 (96%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEA 60
MA+A+DIQP+V DNGTGMVKAGFAGDDAPRAVFPS++GRPRH GVMVGM QKDAYVGDEA
Sbjct: 1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYA 146
MTQIMFETFN PAMYVAIQAVLSLYA
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYA 146
>At2g42100 putative actin
Length = 378
Score = 249 bits (637), Expect = 4e-67
Identities = 113/137 (82%), Positives = 128/137 (92%)
Query: 10 LVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
+V DNGTGMVKAGFAGDDAPRAVFPS++GRPRH GVMVGM +KD +VGDEAQ++RGIL+L
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSL 70
Query: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
KYPIEHG+VSNWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F
Sbjct: 71 KYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESF 130
Query: 130 NVPAMYVAIQAVLSLYA 146
P+MY+ IQAVLSLY+
Sbjct: 131 AFPSMYIGIQAVLSLYS 147
>At2g42090 putative actin
Length = 366
Score = 206 bits (525), Expect = 4e-54
Identities = 96/140 (68%), Positives = 118/140 (83%), Gaps = 5/140 (3%)
Query: 7 IQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
++P+V D G GMV+AGFAGD+AP+ VFP ++GRPR G+ ++YVG+E + R I
Sbjct: 1 MKPIVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDI 55
Query: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
LTLK P+EHGIV+NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMF
Sbjct: 56 LTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMF 115
Query: 127 ETFNVPAMYVAIQAVLSLYA 146
E+F+VPAMYV++Q+VL LY+
Sbjct: 116 ESFDVPAMYVSMQSVLYLYS 135
>At3g27000 actin related protein, putative
Length = 389
Score = 150 bits (378), Expect = 5e-37
Identities = 69/139 (49%), Positives = 94/139 (66%), Gaps = 2/139 (1%)
Query: 10 LVVDNGTGMVKAGFAGDDAPRAVFPSIIGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
+V DNGTG VK GFAG++ P +VFP ++GRP R+ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 128 TFNVPAMYVAIQAVLSLYA 146
+N +++ IQAVL+LYA
Sbjct: 127 KYNFAGVFIQIQAVLTLYA 145
>At1g13180 actin-like protein
Length = 427
Score = 119 bits (297), Expect = 1e-27
Identities = 64/158 (40%), Positives = 88/158 (55%), Gaps = 24/158 (15%)
Query: 10 LVVDNGTGMVKAGFAGDDAPRAVFPSIIG------------------RPRHTGVMVGMGQ 51
+V+DNGTG K GFAG+ P + P+++ + GV +
Sbjct: 9 IVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL-- 66
Query: 52 KDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
D Y+GDEA +K L YPIEHG V +WD ME+ W +N LR PE+H LLT
Sbjct: 67 -DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLT 125
Query: 109 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA 146
E+PL P +RE +I+FETFNVP +Y+A+ +VL+L A
Sbjct: 126 ESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAA 163
>At1g18450 unknown protein
Length = 441
Score = 115 bits (287), Expect = 2e-26
Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIG---------------------R 39
M +++ +VVD G+ KAG+AG+DAP+AVFPS+IG
Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSE 60
Query: 40 PRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV 98
T ++ YVG +A S +R + + PI+ GIVS+WD ++ IW H F + L +
Sbjct: 61 DSKTESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMI 120
Query: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA 146
P EHP+LL E PLN + REK ++MFE + VPA+++A VL+ +A
Sbjct: 121 DPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFA 168
>At1g73910 actin-related protein 5 (ARP5)
Length = 145
Score = 95.5 bits (236), Expect = 1e-20
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 16/136 (11%)
Query: 1 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVG------------ 48
M +++ +VVD G+ KAG+AG+DAP+AVFPS++G G+ +
Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKES 60
Query: 49 ---MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 105 VLLTEAPLNPKANREK 120
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
>At3g60830 actin - like protein
Length = 363
Score = 78.6 bits (192), Expect = 2e-15
Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 7 IQPLVVDNGTGMVKAGFA-GDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
++ LVVD G+ +KAG A D +P + PS + R MV G A D +
Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFE 51
Query: 66 ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 124
+TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+
Sbjct: 52 DVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQL 110
Query: 125 MFETFNVPAMYVAIQAVLSLYA 146
MFETFNV Y + QAVLSLYA
Sbjct: 111 MFETFNVSGFYASEQAVLSLYA 132
>At3g33520 actin like protein
Length = 421
Score = 71.6 bits (174), Expect = 2e-13
Identities = 42/137 (30%), Positives = 73/137 (52%), Gaps = 4/137 (2%)
Query: 10 LVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
+V+DNG G++KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 130 NVPAMYVA-IQAVLSLY 145
++Y+A Q+++ LY
Sbjct: 122 GFSSLYIAHPQSLVHLY 138
>At5g56180 putative protein
Length = 471
Score = 31.6 bits (70), Expect = 0.25
Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 11/66 (16%)
Query: 91 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NVPAMYVAIQA 140
T + ++V P P++++ PL + KA+R ++ +F NVPA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 141 VLSLYA 146
VL+LYA
Sbjct: 241 VLALYA 246
>At1g16690 Unknown protein
Length = 439
Score = 29.6 bits (65), Expect = 0.94
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
D A L++KY + H I S W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 118 REK 120
REK
Sbjct: 225 REK 227
>At3g30790 hypothetical protein
Length = 953
Score = 27.3 bits (59), Expect = 4.6
Identities = 13/45 (28%), Positives = 19/45 (41%), Gaps = 3/45 (6%)
Query: 55 YVGDEAQSKRG---ILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
Y G + KRG + T P E+G NW W ++ +L
Sbjct: 440 YYGAQETCKRGGNWLTTANMPDEYGSTHNWHKQSIFWQLPYWKDL 484
>At3g05750 hypothetical protein
Length = 798
Score = 26.9 bits (58), Expect = 6.1
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 7 IQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPR-HTGVMVGMGQKDAYVGDEAQSKRG 65
+ ++V+NGT K GF A ++ S+ + G ++A V + + K+G
Sbjct: 388 VNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIKKG 447
Query: 66 --ILTLKYPIEHGIVSNWDDMEK 86
++ ++ G+ + DD +K
Sbjct: 448 EKVIKCNITVDGGLKTGDDDRKK 470
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,401,599
Number of Sequences: 26719
Number of extensions: 139952
Number of successful extensions: 306
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 22
length of query: 182
length of database: 11,318,596
effective HSP length: 93
effective length of query: 89
effective length of database: 8,833,729
effective search space: 786201881
effective search space used: 786201881
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC136472.8