BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136472.17 - phase: 0 
         (124 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g43710 histidine decarboxylase like protein                        166  2e-42
At1g50750 hypothetical protein                                         29  0.52
At4g29800 unknown protein                                              28  0.88
At3g54950 putative protein                                             28  1.2
At2g39220 similar to latex allergen from Hevea brasiliensis            27  2.0
At4g03310 hypothetical protein                                         27  3.4
At1g12470 hypothetical protein                                         26  4.4
At5g07890 putative protein                                             26  5.7
At2g11810 MGDG synthase type C (mgdC)                                  26  5.7
At2g07050 cycloartenol synthase                                        25  7.5
At2g14740 putative vacuolar sorting receptor                           25  9.8
At2g14630 En/Spm-like transposon protein                               25  9.8
At1g66720 hypothetical protein                                         25  9.8

>At1g43710 histidine decarboxylase like protein
          Length = 482

 Score =  166 bits (421), Expect = 2e-42
 Identities = 79/106 (74%), Positives = 94/106 (88%), Gaps = 1/106 (0%)

Query: 8   FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
           F+KEVQKCLRNAHY KDRL EAGI AMLNELSSTVVFERP DEEF+R+WQLAC+G+IAHV
Sbjct: 373 FQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHV 432

Query: 68  VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
           VVMP+VTIEKLD+FL +LV+ R  W+E G+ QP C+AS+VG N+C+
Sbjct: 433 VVMPSVTIEKLDNFLKDLVKHRLIWYEDGS-QPPCLASEVGTNNCI 477


>At1g50750 hypothetical protein
          Length = 816

 Score = 29.3 bits (64), Expect = 0.52
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 39  SSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELVQKRATWFEYGTF 98
           + T + E P DE    +        +  +VV P  T +  DD L ++ +  A  F+ G+ 
Sbjct: 583 AGTNMDESPFDENNSSEPPFCADRGVVDIVVSPPETRQACDDEL-DVNESNADMFDDGSK 641

Query: 99  QPYCIASDVG 108
           QP C+  + G
Sbjct: 642 QPKCLLHEDG 651


>At4g29800 unknown protein
          Length = 525

 Score = 28.5 bits (62), Expect = 0.88
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 89  RATWFEYGTFQPYCIASDVGENSCLA 114
           RATW E GTF P    S  G+  C+A
Sbjct: 298 RATWAEPGTFDPVRTCSVDGKTRCVA 323


>At3g54950 putative protein
          Length = 488

 Score = 28.1 bits (61), Expect = 1.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 89  RATWFEYGTFQPYCIASDVGENSCLA 114
           RATW E G F+P  + S  G+  C+A
Sbjct: 261 RATWAEPGVFEPVEMKSVDGQTKCVA 286


>At2g39220 similar to latex allergen from Hevea brasiliensis
          Length = 499

 Score = 27.3 bits (59), Expect = 2.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 89  RATWFEYGTFQPYCIASDVGENSCLA 114
           RATW E G F+P  + S  G+  C+A
Sbjct: 274 RATWAEPGVFEPVEMRSVDGKTRCVA 299


>At4g03310 hypothetical protein
          Length = 562

 Score = 26.6 bits (57), Expect = 3.4
 Identities = 11/30 (36%), Positives = 19/30 (62%)

Query: 30  GIGAMLNELSSTVVFERPHDEEFIRKWQLA 59
           G+G++ NE SS  V  +PH++  +   +LA
Sbjct: 331 GVGSLHNEASSATVGPQPHNDPVVLSEKLA 360


>At1g12470 hypothetical protein
          Length = 950

 Score = 26.2 bits (56), Expect = 4.4
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 34  MLNELSSTVVFERPHDEEFIRKWQLACKGNIAH 66
           M+NE+  T+ F +P D ++   W L  + N+A+
Sbjct: 912 MINEI--TLPFIKPEDSQYSTSWDLRSETNLAN 942


>At5g07890 putative protein
          Length = 389

 Score = 25.8 bits (55), Expect = 5.7
 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 17/94 (18%)

Query: 9   EKEVQKCLRNAHYFKDRLIEAG-----IGAMLNELSSTVVFERPHDEEFIRKWQLACKGN 63
           EKE+  C +   Y +D+LI        +   L++L   +   R  +EE        C   
Sbjct: 64  EKELLNCYKEIDYLRDQLIFRSKEVNYLNEHLHDLEFKLAESRNLEEEVNSLRDELCMSK 123

Query: 64  IAHVVVM------------PNVTIEKLDDFLNEL 85
             H++++             ++T+EKL++ ++ L
Sbjct: 124 SEHLLLLQELESKEIELQCSSLTLEKLEETISSL 157


>At2g11810 MGDG synthase type C (mgdC)
          Length = 465

 Score = 25.8 bits (55), Expect = 5.7
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 15/93 (16%)

Query: 19  AHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKL 78
           A+Y K+  IEAG+     ++  +V     H   ++ KWQ   K  I   V+    T  + 
Sbjct: 160 AYYAKE--IEAGLMEYKPDIIISVHPLMQHIPLWVMKWQGLHKKVIFVTVITDLNTCHR- 216

Query: 79  DDFLNELVQKRATWFEYGTFQPYCIASDVGENS 111
                       TWF +G  + YC + +V + +
Sbjct: 217 ------------TWFHHGVSRCYCPSKEVAKRA 237


>At2g07050 cycloartenol synthase
          Length = 759

 Score = 25.4 bits (54), Expect = 7.5
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 44  FERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELVQ---KRATWFEYGTFQP 100
           F + H  + + + Q + +  I+ V  +P V IE  DD   E+V+   KR   F Y T Q 
Sbjct: 53  FVQKHSADLLMRLQFSRENLISPV--LPQVKIEDTDDVTEEMVETTLKRGLDF-YSTIQA 109

Query: 101 Y 101
           +
Sbjct: 110 H 110


>At2g14740 putative vacuolar sorting receptor
          Length = 628

 Score = 25.0 bits (53), Expect = 9.8
 Identities = 15/59 (25%), Positives = 29/59 (48%), Gaps = 8/59 (13%)

Query: 61  KGNIAHVVVMPNVTIE------KLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
           KG+   V ++P + +       KL+   + +++   + FE  T    C+++DV  N CL
Sbjct: 365 KGSRGDVTILPTLVVNNRQYRGKLEK--SAVLKALCSGFEETTEPAICLSTDVESNECL 421


>At2g14630 En/Spm-like transposon protein
          Length = 133

 Score = 25.0 bits (53), Expect = 9.8
 Identities = 11/30 (36%), Positives = 19/30 (62%)

Query: 30 GIGAMLNELSSTVVFERPHDEEFIRKWQLA 59
          G+G++ NE SS  V  +PH++  +   +LA
Sbjct: 20 GVGSLHNEASSATVGPQPHNDLVVLLEKLA 49


>At1g66720 hypothetical protein
          Length = 352

 Score = 25.0 bits (53), Expect = 9.8
 Identities = 16/53 (30%), Positives = 26/53 (48%), Gaps = 1/53 (1%)

Query: 31  IGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVV-VMPNVTIEKLDDFL 82
           IGA LN+L+   V E+   E F     +A +G +  ++      TIE  +D +
Sbjct: 233 IGASLNDLAQQGVIEKDKVESFNITLYIAEEGELRQIIEENGKFTIEAFEDII 285


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.324    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,807,356
Number of Sequences: 26719
Number of extensions: 99983
Number of successful extensions: 301
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 294
Number of HSP's gapped (non-prelim): 13
length of query: 124
length of database: 11,318,596
effective HSP length: 87
effective length of query: 37
effective length of database: 8,994,043
effective search space: 332779591
effective search space used: 332779591
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)