BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136286.5 + phase: 1 /partial
         (107 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g14410 putative protein                                             90  2e-19
At1g71260 unknown protein (At1g71260)                                  67  2e-12
At2g02740 hypothetical protein                                         33  0.031
At5g35930 unknown protein                                              28  0.99
At5g08440 unknown protein                                              26  2.9
At3g49330 putative protein                                             26  3.8
At2g45570 cytochrome P450 (CYP76C2)                                    25  4.9

>At1g14410 putative protein
          Length = 263

 Score = 89.7 bits (221), Expect = 2e-19
 Identities = 40/63 (63%), Positives = 49/63 (77%)

Query: 3   LPARVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNR 62
           LPAR +V  S+YKGKA L V P  P+F + DSG FK+SK+G +LLQF PSAG RQYDW++
Sbjct: 77  LPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSK 136

Query: 63  KQV 65
           KQV
Sbjct: 137 KQV 139


>At1g71260 unknown protein (At1g71260)
          Length = 238

 Score = 66.6 bits (161), Expect = 2e-12
 Identities = 28/59 (47%), Positives = 40/59 (67%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQ 64
           R+    S++KGKA L V PVLP FT  DSG  +I + G +++ F+P+ G R+YDW +KQ
Sbjct: 53  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 111


>At2g02740 hypothetical protein
          Length = 192

 Score = 32.7 bits (73), Expect = 0.031
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKIS 40
           R +V  S+YKGKA L + P  P+F + +    KI+
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALEIVMMKIN 118


>At5g35930 unknown protein
          Length = 1175

 Score = 27.7 bits (60), Expect = 0.99
 Identities = 12/28 (42%), Positives = 17/28 (59%), Gaps = 1/28 (3%)

Query: 65  VSYCSFIIWCWQHIRYLYSLEFRFYRCC 92
           V   S +IWC  H   LY+L++R  +CC
Sbjct: 875 VDTSSQLIWCGSHDHTLYALDYR-SQCC 901


>At5g08440 unknown protein
          Length = 726

 Score = 26.2 bits (56), Expect = 2.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 8   HVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEG 43
           H+ +S+Y G A+  VS  +      ++ T  I KEG
Sbjct: 605 HIEKSLYNGHALFKVSYSIGYLDIWEAATLSIKKEG 640


>At3g49330 putative protein
          Length = 186

 Score = 25.8 bits (55), Expect = 3.8
 Identities = 12/31 (38%), Positives = 20/31 (63%), Gaps = 4/31 (12%)

Query: 78  IRYLYSLEFRFYRCCQALHIIS----KRSFF 104
           ++YLY  ++RF R  QAL +++    + SFF
Sbjct: 117 LKYLYLRDYRFMRAYQALALVNISMCRTSFF 147


>At2g45570 cytochrome P450 (CYP76C2)
          Length = 512

 Score = 25.4 bits (54), Expect = 4.9
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 20  LVVSPVLPKFTSSDSGTFKISKEGLM-------LLQFVPSAGFRQYDWNRKQVSYCS 69
           ++ S  L  + S+ SG F+ +  G+M          F P  GF     NRK +  CS
Sbjct: 193 ILFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTLKACS 249


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.331    0.142    0.478 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,326,725
Number of Sequences: 26719
Number of extensions: 86294
Number of successful extensions: 246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 240
Number of HSP's gapped (non-prelim): 7
length of query: 107
length of database: 11,318,596
effective HSP length: 83
effective length of query: 24
effective length of database: 9,100,919
effective search space: 218422056
effective search space used: 218422056
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 52 (24.6 bits)