BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135959.8 + phase: 0 /pseudo/partial
(1454 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g37060 Athila retroelment ORF 1, putative 1244 0.0
At2g14040 putative retroelement pol polyprotein 853 0.0
At4g07660 putative athila transposon protein 630 e-180
At4g07600 474 e-133
At2g10690 putative retroelement pol polyprotein 466 e-131
At2g12040 T10J7.2 430 e-120
At2g06320 putative retroelement pol polyprotein 387 e-107
At2g11680 putative retroelement pol polyprotein 365 e-100
At2g13060 pseudogene 361 2e-99
At2g10780 pseudogene 351 2e-96
At3g11970 hypothetical protein 347 3e-95
At1g36590 hypothetical protein 342 7e-94
At2g04670 putative retroelement pol polyprotein 333 6e-91
At1g35370 hypothetical protein 330 5e-90
At4g10580 putative reverse-transcriptase -like protein 300 4e-81
At3g31340 Athila ORF 1, putative 298 2e-80
At2g14650 putative retroelement pol polyprotein 277 4e-74
At1g20390 hypothetical protein 270 6e-72
At2g06890 putative retroelement integrase 267 4e-71
At2g07660 putative retroelement pol polyprotein 255 1e-67
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 1244 bits (3218), Expect = 0.0
Identities = 650/1187 (54%), Positives = 822/1187 (68%), Gaps = 107/1187 (9%)
Query: 315 NAVTLRSGKPL---EDPIRRTET-------------DHSEKEIREP----PSRETRAEKE 354
+A+TLRSGK L E P + TE + +EK I EP P+R A
Sbjct: 433 HAITLRSGKELPTKESPNQNTEDSLDQDGEDFCQNGNSAEKAIEEPILHQPTRPL-APAA 491
Query: 355 EPRVEGNTT----------PPFKPKIPFPQRFAKSKLDEQFKKFMEMMNKIYIDVPFTEV 404
P VE PP+KP +PFP RF K + + + + + + +P +
Sbjct: 492 SPLVEKPAAAKTKENVFIPPPYKPPLPFPGRFKKVMIQKYKALLEKQLKNLEVTMPLVDC 551
Query: 405 LTQMPTYAKFLKEILSKKRKIEESETVNLTEECSAIIQNKL-PPKLKDPGSFSIPCVIGS 463
L +P K++K++++++ K E V L+ ECSAIIQ K+ P KL DPGSF++PC +G
Sbjct: 552 LALIPDSNKYVKDMITERIK-EVQGMVVLSHECSAIIQQKIIPKKLGDPGSFTLPCALGP 610
Query: 464 EVVKKAMCDLGASVSLMPLSLYERLGIGELKSTRMTLQLADRSVKYPAGIIEDVPVKVGE 523
K +CDLGASVSLMPL + ++LG + K ++L LADRSV+ G++ED+PV +G
Sbjct: 611 LAFSKCLCDLGASVSLMPLPVAKKLGFNKYKPCNISLILADRSVRISHGLLEDLPVMIGV 670
Query: 524 VYIPADFVVMEMEEDNQVPILLGRPFLATAGAIIDVKKGKLAFNVGKET-VEFELAKLMK 582
V +P DFVV+EM+E+ + P++LGRPFLA A AIIDVKKGK+ N+G++ + F++ MK
Sbjct: 671 VEVPTDFVVLEMDEEPKDPLILGRPFLARARAIIDVKKGKIDLNLGRDLKMTFDITNTMK 730
Query: 583 GPSIKDSCCMIDIIDHCVKECSLASTTHDGLEVCLVNNAGT-KLEGEAKAYEVLLDR-TP 640
P+I+ + I+ +D + D L+ L ++ L E E +LD T
Sbjct: 731 KPTIEGNIFWIEEMDMLADKMLEELGETDHLQSALTKDSKEGDLHLETLGGEYILDHITR 790
Query: 641 PI-----KDLSVEELIKEEPTLQPKE-----APKVELKTLPSNLRYEFLGPNSTYPVIVN 690
P S++ E L + APKV+LK LP LRY FLG NSTYPVIVN
Sbjct: 791 PTAHSVYSTTSLDHNSSSEANLVSDDWSEIKAPKVDLKPLPKGLRYVFLGLNSTYPVIVN 850
Query: 691 ASLDEVETEKLLYVLKKYPKAIGYTIDDIKGINPSLCMHRILLEDDYKPSIEHQRRLNPN 750
L + L+ L KY KAIGY++DDIKGI+P+LC HRI LE++ SIE QRRLNPN
Sbjct: 851 DELTADQVNLLITELMKYRKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRLNPN 910
Query: 751 MKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGGLTVIKNDKNESIATRTVTGWRM 810
+KEVVKKE+LKLLDAGVIYPISDS WVSPV VPKKGG+TV+KN K+E I TRT+TG RM
Sbjct: 911 LKEVVKKEILKLLDAGVIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITGHRM 970
Query: 811 CIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTC 870
CI+YRKLN A+RK+HFPLPFID MLERLA H ++C+LD YSGFFQIPIHPNDQ KTTFTC
Sbjct: 971 CIEYRKLNVASRKEHFPLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTTFTC 1030
Query: 871 PFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEK 930
P+GTFAY+RMPFGLCNAPATFQRCM SIFSD +E+++EVFMDDFSV+GS+F CL NL +
Sbjct: 1031 PYGTFAYKRMPFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLNLCR 1090
Query: 931 VLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRS 990
VL+RCE+ NLVLNWEKCHFMVREGIVLG +S+ GIEVD+AK++++ ++ PP +VK+IRS
Sbjct: 1091 VLKRCEETNLVLNWEKCHFMVREGIVLGRKISEEGIEVDKAKIDVMMQLQPPKTVKDIRS 1150
Query: 991 FLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQAFCRLKEALITAPIIQPPDW 1050
FLGHAGFYR FIKDFS + +PLT LL K+ +F FDD CL AF +KEALITAPI+Q P+W
Sbjct: 1151 FLGHAGFYRIFIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQAPNW 1210
Query: 1051 NLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDK 1110
+ PFEI+ T+D AQV YATTEKELLAVV+A +K
Sbjct: 1211 DFPFEII----------------------------TMDDAQVRYATTEKELLAVVFAFEK 1242
Query: 1111 FRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHL 1170
FR YLVGSK+ +YTDH+A++++ KKD KPRL+RWILLLQEFD+EI DKKG+EN VADHL
Sbjct: 1243 FRSYLVGSKVTIYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGVADHL 1302
Query: 1171 SRLREANKDELPLDDSFPDDQLFLLAQTD---APWYADFVNFLAAGVLPPELNYQQKKKF 1227
SR+R +DE+ +DDS P++QL + Q + PWYAD VN+L +G PP L+ +KKKF
Sbjct: 1303 SRMR--IEDEVLIDDSMPEEQLMAIQQLNEKKLPWYADHVNYLVSGEEPPNLSSYEKKKF 1360
Query: 1228 FNDLKHYYWDEPYLFRRGSDGIFRRCIPESEVSSILTHCHSSSYGGHASTQKTSFKILHS 1287
F D+ H+YWDEPYL+ D I+R C+ E E+ IL HCH +YGGH +T KT KIL +
Sbjct: 1361 FKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIEGILLHCHGFAYGGHFATFKTMSKILQA 1420
Query: 1288 GFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMPLNNILEVEIFDVWGVDFMGPFPSSFG 1347
GFWWPS+FKD FISKCD E FDVWG+DFMGPFPSS+G
Sbjct: 1421 GFWWPSMFKDAQEFISKCD--------------------SFENFDVWGIDFMGPFPSSYG 1460
Query: 1348 NQYILVAVDYVSKWVEAIASPTNDAQVVIKMFKKVIFPRFGVPRVVISDGGSHFISKHFE 1407
N+YILVA+DYVSKWVEAIAS TNDA+VV+K+FK +IFPRFGVPR+VISDGG HFI+K FE
Sbjct: 1461 NKYILVAIDYVSKWVEAIASHTNDARVVLKLFKTIIFPRFGVPRIVISDGGKHFINKGFE 1520
Query: 1408 KLLQKLGVRHKVATPYHPQTSGQVEVSNRQIKAILEKTVSTSRTDWS 1454
LL+K GV+HK TSGQVE+SNR+IKAILEKTV ++R DWS
Sbjct: 1521 NLLKKHGVKHK--------TSGQVEISNREIKAILEKTVGSTRKDWS 1559
Score = 119 bits (299), Expect = 1e-26
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 1 NQFSGSPSEDPNLHISNFWRLSVTCKDD---QETVRLHLFPFSLKNKASNWFNSLKPGSI 57
N+F G P EDP H+ F RL K + ++ +L LFPFSL +KA W SL GSI
Sbjct: 52 NKFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSI 111
Query: 58 TSWDQLRREFLCRFFPPSKTAQLRGKLYQFTQMNGESLFDVWERFKEILRRCPHHGLEKW 117
TSW+ ++ FL +FF S+TA+LR + FTQ N E+ ++ WERFK +CPHH
Sbjct: 112 TSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWERFKGYQTQCPHH----- 166
Query: 118 LIIHIFYNGLTSSTKLTIDAAAGGALMNKDFTTAYALIENMALNLFQWTEEKE-TVDPSP 176
++ +D A+ G +NKD + ++EN+A + + E+ + ++ S
Sbjct: 167 --------------EMLLDTASNGNFLNKDVEDGWEVVENLAQSDGNYNEDYDRSIRTSS 212
Query: 177 SEKEAGINETSSIDYLSTKLNALSQR 202
E E +++ KL + Q+
Sbjct: 213 DSDEKHRREMKAMNDKLDKLLLMQQK 238
>At2g14040 putative retroelement pol polyprotein
Length = 841
Score = 853 bits (2205), Expect = 0.0
Identities = 460/919 (50%), Positives = 589/919 (64%), Gaps = 128/919 (13%)
Query: 350 RAEKEEPRVEGNTTPPFKPKIPFPQRFAKSKLDEQFKKFMEMMNKIYIDVPFTEVLTQMP 409
R + E + + PP+ PK+PFP R K + ++++ F E+M ++ P
Sbjct: 4 RKQTLEEKAKKTVLPPYVPKLPFPGRQRKIQREKEYSLFDEIMRQLQRYSP--------- 54
Query: 410 TYAKFLKEILSKKRKIEESETVNLTEECSAIIQNKLPPKLKDPGSFSIPCVIGSEVVKKA 469
ECSAI+QN +P K +DPGSF +P IG +
Sbjct: 55 --------------------------ECSAILQNVIPVKREDPGSFVLPSRIGEYTFDRC 88
Query: 470 MCDLGASVSLMPLSLYERLGIGELKSTRMTLQLADRSVKYPAGIIEDVPVKVGEVYIPAD 529
+CDLGA VSLMP S+ +RLG T+M+L L DRS+ +P G+ EDV V+VG YIP D
Sbjct: 89 LCDLGAGVSLMPFSVAKRLGDTNFTPTKMSLVLGDRSISFPVGVAEDVQVRVGNFYIPTD 148
Query: 530 FVVMEMEEDNQVPILLGRPFLATAGAIIDVKKGKLAFNVGKETVEFELAKLMKGPSIKDS 589
FV++E++E+ + ++LGRPFL A+IDV+K K+ +G EF + ++M P+ +
Sbjct: 149 FVIIELDEEPRHRLILGRPFLNIVAALIDVRKSKINLRIGDIVQEFNMERIMSKPTTECQ 208
Query: 590 CCMIDIIDHCVKECSLASTTHDGLEVCLVNNAGT-KLEGEAKA-YEVLLDRTPPIK---- 643
+DI+D V E T D L+ L GEA + +LD + P+
Sbjct: 209 TFWVDIMDELVNELLAELNTEDPLQTVLTKEESEFGYLGEATTRFARILDSSSPMTKVVA 268
Query: 644 --DLSVEELIKEEPTLQPKE--------APKVELKTLPSNLRYEFLGPNSTYPVIVNASL 693
+L E+ K PK+ APK+ELK LP+ LR FLGPNSTY VI+N L
Sbjct: 269 FAELGDNEVEKALVVSSPKDCDDWSELNAPKMELKPLPARLRVAFLGPNSTYLVIINPEL 328
Query: 694 DEVETEKLLYVLKKYPKAIGYTIDDIKGINPSLCMHRILLEDDYKPSIEHQRRLNPNMKE 753
+ VE+ LL L+KY KA+GY++DDI GI+P+LCMH I LE + S+EHQRRLN N+++
Sbjct: 329 NNVESALLLCELRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRLNSNLRD 388
Query: 754 VVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCID 813
VVKKE++KLLDAG+IYPISDS WVSPV VVPKKGG+ VIKN+KNE I TRTVTG RMCID
Sbjct: 389 VVKKEIMKLLDAGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTGHRMCID 448
Query: 814 YRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPFG 873
YRKLN ATRKD+FPL FIDQMLERL+ ++C+LDGY GFFQI IHP+DQEKTTFTCP+G
Sbjct: 449 YRKLNSATRKDNFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTTFTCPYG 508
Query: 874 TFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLE 933
TFAYRRMPFGLCNAPATFQ CM IFSD +E MEVF+DDF VL+
Sbjct: 509 TFAYRRMPFGLCNAPATFQHCMKYIFSDMIEDFMEVFIDDF---------------LVLQ 553
Query: 934 RCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLG 993
RCE +LVLNWEK HFMVR+GIVLGH +S++G+EVDRAK+EI+ FLG
Sbjct: 554 RCEDKHLVLNWEKSHFMVRDGIVLGHKISEKGVEVDRAKIEIMR-------------FLG 600
Query: 994 HAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLP 1053
HAGFYRRFIKDFS I +P T LL K+ FDD+CLQAF +KE+L++A I+QPP+W LP
Sbjct: 601 HAGFYRRFIKDFSKIARPCTQLLCKEQKSEFDDTCLQAFNIVKESLVSALIVQPPEWELP 660
Query: 1054 FEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQ 1113
FE++CDASDY VG VLGQRKDKK+HAIYYAS+TLDGAQV
Sbjct: 661 FEVICDASDYVVGAVLGQRKDKKLHAIYYASRTLDGAQV--------------------- 699
Query: 1114 YLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRL 1173
IV+T H+A++YLL+KKDAKPRL+RWILLLQ+FDLEIKDKKG+EN VAD+LSRL
Sbjct: 700 -------IVHTVHAALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEVADNLSRL 752
Query: 1174 REAN----KDELP------LDDSFPDD---------QLFLL--AQTDAPWYADFVNFLAA 1212
R +D LP ++D + D+ +L L +++ PWYADF N+L+
Sbjct: 753 RVQEEVLMRDILPGENLASIEDCYMDEVGRLRVSTLELMTLHTGESNLPWYADFANYLSC 812
Query: 1213 GVLPPELNYQQKKKFFNDL 1231
V PP+ KKK ++
Sbjct: 813 EVPPPDFTGYFKKKLLKEV 831
>At4g07660 putative athila transposon protein
Length = 724
Score = 630 bits (1624), Expect = e-180
Identities = 328/596 (55%), Positives = 418/596 (70%), Gaps = 46/596 (7%)
Query: 439 AIIQNKL-PPKLKDPGSFSIPCVIGSEVVKKAMCDLGASVSLMPLSLYERLGIGELKSTR 497
AI Q K+ P KL DPGSF++PC +G K+ +CDLGA VSLMPLS+ +RLG + KS
Sbjct: 3 AITQKKIVPKKLIDPGSFTLPCSLGPLAFKRCLCDLGALVSLMPLSVAKRLGFTQYKSCN 62
Query: 498 MTLQLADRSVKYPAGIIEDVPVKVGEVYIPADFVVMEMEEDNQVPILLGRPFLATAGAII 557
++L LADRSV+ P + E++P+++G V IP DFVV+EM+E+ + P++LGRPFLATAGA+
Sbjct: 63 ISLILADRSVRIPHSLFENLPIRIGAVDIPTDFVVLEMDEEPKDPLILGRPFLATAGAMN 122
Query: 558 DVKKGKLAFNVGKET-VEFELAKLMKGPSIKDSCCMIDIIDHCVKECSLASTTHDGLEVC 616
DVKKGK+ N+GK + F++ MK P+IK I+ ID E D L
Sbjct: 123 DVKKGKIDLNLGKYCRMTFDVKDAMKKPTIKGQLFWIEEIDQLADELLEERAEEDHLYSA 182
Query: 617 LVNNAGTK-LEGEAKAYEVLLD------RTPPIKDLSVEE----LIKEEPTLQPK----- 660
L L E Y+ LLD + P ++L+ E ++ EE + Q +
Sbjct: 183 LTKRGEDGFLHLETLGYQKLLDSHKAMEESEPFEELNGPETEVMVMSEEGSTQVQPAHSR 242
Query: 661 ----------------------------EAPKVELKTLPSNLRYEFLGPNSTYPVIVNAS 692
+APKV+LK+LP LRY F GPNSTYPVI+N
Sbjct: 243 TYSTNNSTSTISNSGELIIPTSDDWSELKAPKVDLKSLPKGLRYVFFGPNSTYPVIINVE 302
Query: 693 LDEVETEKLLYVLKKYPKAIGYTIDDIKGINPSLCMHRILLEDDYKPSIEHQRRLNPNMK 752
L++ E LL L+KY +AIGY++ DIK I+PSLC HRI LE++ SIE QRRLN N+K
Sbjct: 303 LNDNEVNLLLSELRKYKRAIGYSLSDIKRISPSLCNHRIHLENESYSSIEPQRRLNLNLK 362
Query: 753 EVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCI 812
EVVKKE+LKLLDAGVIYPISDS WV PV VPKKGG+TV+KN+K+E I TRT+TG R+CI
Sbjct: 363 EVVKKEILKLLDAGVIYPISDSTWVFPVHCVPKKGGMTVVKNEKDELIPTRTITGHRVCI 422
Query: 813 DYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPF 872
DYRKLN A+RKDHFPLPF +QMLE LA H + C+LDGYSGFFQIPIHPNDQEKTTFTCP+
Sbjct: 423 DYRKLNAASRKDHFPLPFTNQMLEGLANHLYNCFLDGYSGFFQIPIHPNDQEKTTFTCPY 482
Query: 873 GTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVL 932
GTFAY+RMPFGLCNAP TFQRCM SIFSD +EK++EVFMDDFSV+G +F CL NL +VL
Sbjct: 483 GTFAYKRMPFGLCNAPTTFQRCMTSIFSDLIEKMVEVFMDDFSVYGPSFSSCLLNLGRVL 542
Query: 933 ERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEI 988
+ E+ NLVLNWEKC+FMV+EGIVLGH +S++GIEVD+ K++++ ++ PP +VK+I
Sbjct: 543 TKWEETNLVLNWEKCYFMVKEGIVLGHKISEKGIEVDKEKIKVMMQLQPPKTVKDI 598
Score = 147 bits (371), Expect = 4e-35
Identities = 74/131 (56%), Positives = 100/131 (75%), Gaps = 2/131 (1%)
Query: 1065 VGVVLGQRKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYT 1124
+ V++ + K + IYYAS+TLD AQ YATTEKELL VV+A KFR YLV SK+ VYT
Sbjct: 583 IKVMMQLQPPKTVKDIYYASRTLDEAQGRYATTEKELLVVVFAFKKFRSYLVESKVTVYT 642
Query: 1125 DHSAIKYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLREANKDELPLD 1184
DH+A++++ KKD KPRL+R ILLLQEFD+EI +KKG+EN ADHLSR+R ++ + +D
Sbjct: 643 DHAALRHMYAKKDTKPRLLRGILLLQEFDMEIVEKKGIENGAADHLSRMR--IEEPILID 700
Query: 1185 DSFPDDQLFLL 1195
DS P++QL ++
Sbjct: 701 DSMPEEQLMVV 711
>At4g07600
Length = 630
Score = 474 bits (1221), Expect = e-133
Identities = 221/325 (68%), Positives = 262/325 (80%), Gaps = 18/325 (5%)
Query: 777 VSPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLE 836
VSPVQ +PKKGG+TVIKN+K+E I RT+TG RMCIDYR LN A+R DHFPLPF DQMLE
Sbjct: 324 VSPVQCIPKKGGITVIKNEKDELIPIRTITGLRMCIDYRNLNAASRNDHFPLPFTDQMLE 383
Query: 837 RLAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMM 896
RLA H ++C+LDGYSGFFQIPIHPND EKTTFTCP+GTFAY RMPFGLCNAPATFQRCM
Sbjct: 384 RLANHPYYCFLDGYSGFFQIPIHPNDHEKTTFTCPYGTFAYERMPFGLCNAPATFQRCMT 443
Query: 897 SIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIV 956
SIFSD +E+++EVFMDDFSV+G +F CL NL +VL RCE+ NLVLNWEKCHFMV+EGI+
Sbjct: 444 SIFSDIIEEMVEVFMDDFSVYGPSFSSCLLNLGRVLTRCEETNLVLNWEKCHFMVKEGIM 503
Query: 957 LGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLL 1016
LGH +S++GIEVD+ FLGHAGFYRRFIKDFS I +PLT LL
Sbjct: 504 LGHKISEKGIEVDKG------------------CFLGHAGFYRRFIKDFSKIARPLTRLL 545
Query: 1017 LKDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKK 1076
K+ +F FD+ C ++F +KEAL++AP+++ +W+ PFEIMCDA DYAVG VLGQ+ DKK
Sbjct: 546 CKETEFEFDEDCPKSFHTIKEALVSAPVVRATNWDYPFEIMCDALDYAVGAVLGQKIDKK 605
Query: 1077 MHAIYYASKTLDGAQVNYATTEKEL 1101
+H IYYAS+TLD AQ YATTEKEL
Sbjct: 606 LHVIYYASRTLDEAQGRYATTEKEL 630
Score = 177 bits (448), Expect = 5e-44
Identities = 103/260 (39%), Positives = 161/260 (61%), Gaps = 18/260 (6%)
Query: 388 FMEMMNKIYIDVPFTEVLTQMPTYAKFLKEILSKKRKIEESETVNLTEECSAIIQNKL-P 446
F + + ++ + +P + L + KFLK+++ ++ + E V L+ ECSAIIQ K+ P
Sbjct: 2 FAKNIKEVELRIPLVDALALILDTHKFLKDLIVERIQ-EVQGMVVLSHECSAIIQKKIVP 60
Query: 447 PKLKDPGSFSIPCVIGSEVVKKAMCDLGASVSLMPLSLYERLGIGELKSTRMTLQLADRS 506
KL DPGSF++PC +G+ + +CDLGA VS MPLS+ +RLG + KS ++L LADRS
Sbjct: 61 KKLSDPGSFTLPCFLGTVAFNRCLCDLGALVSPMPLSIAKRLGFTQYKSCNISLILADRS 120
Query: 507 VKYPAGIIEDVPVKVGEVYIPADFVVMEMEEDNQVPILLGRPFLATAGAIIDVKKGKLAF 566
V+ G+++++P+++G I DFV++EM+E+ + P++L RPFLATAGA+IDVKKGK+
Sbjct: 121 VRISHGLLKNLPIRIGAAEISTDFVILEMDEEPKDPLILRRPFLATAGAMIDVKKGKIDL 180
Query: 567 NVGKE-TVEFELAKLMKGPSIKDSCCMIDIIDHCVKEC--SLASTTHDGLEVCLVNNAGT 623
N+GK+ + F++ MK P+I+ I+ +D E LA H +N+A T
Sbjct: 181 NLGKDFRMTFDIKDAMKKPNIEGQLFWIEEMDQLADELLEELAQEDH-------LNSALT 233
Query: 624 K------LEGEAKAYEVLLD 637
K L + Y+ LLD
Sbjct: 234 KTGQDGFLHLKVLGYQKLLD 253
>At2g10690 putative retroelement pol polyprotein
Length = 622
Score = 466 bits (1200), Expect = e-131
Identities = 230/382 (60%), Positives = 288/382 (75%), Gaps = 27/382 (7%)
Query: 863 QEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVFMDDFSVHGSNFD 922
++KTTFTCP GTFAY+RM FGLCNAP TFQR M SIFSDF+E+IMEVFMDDFS F
Sbjct: 163 KKKTTFTCPNGTFAYKRMSFGLCNAPGTFQRSMTSIFSDFIEEIMEVFMDDFS----GFS 218
Query: 923 DCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPP 982
CL NL +VLERCE+ NLVLNWEKCHFMV EGIVLGH +S +GIEVD+AK++++ ++ PP
Sbjct: 219 SCLLNLCRVLERCEETNLVLNWEKCHFMVHEGIVLGHKISGKGIEVDKAKIDVMIQLQPP 278
Query: 983 TSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQAFCRLKEALITA 1042
+VK+IRSFLGHA FYRRFIKDFS I +PLT LL K+ +F FD+ CL+AF +KE L++A
Sbjct: 279 KTVKDIRSFLGHAEFYRRFIKDFSKIARPLTRLLCKETEFNFDEDCLKAFHLIKETLVSA 338
Query: 1043 PIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGAQVNYATTEKELL 1102
PI Q P+W+ PFEIMCDA DYAVG VL Q+ D K+H IYYAS+T+D AQ YAT EKELL
Sbjct: 339 PIFQAPNWDHPFEIMCDAFDYAVGAVLDQKIDDKLHVIYYASRTMDEAQTRYATIEKELL 398
Query: 1103 AVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGV 1162
AVV+A +K R YLVG K+ VY DH+A++++ KK+ K RL+RWILLLQEFD+EI DKKGV
Sbjct: 399 AVVFAFEKIRSYLVGFKVKVYIDHAALRHIYAKKETKSRLLRWILLLQEFDMEIIDKKGV 458
Query: 1163 ENVVADHLSRLREANKDELPLDDSFPDDQLFL-------------------LAQTDAPWY 1203
EN VADHLSR+R +D +P+DD+ P++QL + + PWY
Sbjct: 459 ENGVADHLSRMR--IEDSVPIDDTMPEEQLMFYDLVNKSFDTKDMPEEADAVEEEKLPWY 516
Query: 1204 ADFVNFLAAGVLPPELNYQQKK 1225
AD VN+L +G + E++ +Q K
Sbjct: 517 ADLVNYLTSGQV--EVSNRQMK 536
Score = 61.2 bits (147), Expect = 4e-09
Identities = 28/52 (53%), Positives = 36/52 (68%)
Query: 657 LQPKEAPKVELKTLPSNLRYEFLGPNSTYPVIVNASLDEVETEKLLYVLKKY 708
L +APK++LK LP LRY FLGPN TYPVI+N L + + +LL L+KY
Sbjct: 95 LSELKAPKLDLKPLPKGLRYAFLGPNDTYPVIINDGLSDEQVNQLLNELRKY 146
Score = 42.7 bits (99), Expect = 0.002
Identities = 20/28 (71%), Positives = 22/28 (78%)
Query: 1427 TSGQVEVSNRQIKAILEKTVSTSRTDWS 1454
TSGQVEVSNRQ+K IL K V S+ DWS
Sbjct: 524 TSGQVEVSNRQMKDILTKVVGVSKRDWS 551
>At2g12040 T10J7.2
Length = 976
Score = 430 bits (1106), Expect = e-120
Identities = 201/304 (66%), Positives = 255/304 (83%), Gaps = 2/304 (0%)
Query: 892 QRCMMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMV 951
+R MMSIF+D +E IMEVFMDDFSV+GS F+DCL NL KVL RCE+ +LVLNWEKCHF V
Sbjct: 79 ERGMMSIFTDMIEDIMEVFMDDFSVYGSLFEDCLENLYKVLARCEEKHLVLNWEKCHFRV 138
Query: 952 REGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKP 1011
++GIVLGH +S+ GIE DRAK+E++ + ++K +RSFLGHAGFYRRFIKDFS I +P
Sbjct: 139 QDGIVLGHRISEYGIEADRAKIEVMTSLQALDNLKAVRSFLGHAGFYRRFIKDFSKIARP 198
Query: 1012 LTNLLLKDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQ 1071
LT+LL K+ F F C AF ++K+ALI+API+QPPDW+LPFE+MCDASD+AVG VLGQ
Sbjct: 199 LTSLLCKEVKFEFTQECHDAFQQIKQALISAPIVQPPDWDLPFEVMCDASDFAVGAVLGQ 258
Query: 1072 RKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKY 1131
RKDKK+HAIYYAS+TLD A+ NYATTEKE LAVV+A +KFR YLVG K+IV+TDH+A+KY
Sbjct: 259 RKDKKLHAIYYASRTLDDAKRNYATTEKEFLAVVFAFEKFRSYLVGLKVIVHTDHAALKY 318
Query: 1132 LLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPDDQ 1191
L+ KDAKPRL+RWILLLQEFD+E++DKKGVE VADHLSR+R D++P++D P++
Sbjct: 319 LMQNKDAKPRLLRWILLLQEFDIEVRDKKGVEKCVADHLSRIR--IDDDVPINDFLPEEN 376
Query: 1192 LFLL 1195
++++
Sbjct: 377 IYMI 380
Score = 238 bits (608), Expect = 1e-62
Identities = 128/251 (50%), Positives = 159/251 (62%), Gaps = 20/251 (7%)
Query: 1197 QTDAPWYADFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPE 1256
+ D PWYAD V +L A V KK+F +++ YYWD+PYL I
Sbjct: 455 EKDYPWYADIVIYLGADVELDNFIDYNKKRFLREIRRYYWDKPYL---------PISIVL 505
Query: 1257 SEVSSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITK 1316
E + C+ S +S ++ + S ++H+ D CQR G I+
Sbjct: 506 MEFIGEMHCCNRDSIQSSSSRLLVAYNV--------SGCSEIHI---ASDPCQRRGKISN 554
Query: 1317 RNEMPLNNILEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIASPTNDAQVVI 1376
NEMP ILEV++FD WG++FMGP P S N YILV VDYVSKWVEAIASP ND+ VV+
Sbjct: 555 CNEMPQKFILEVKVFDCWGINFMGPIPPSNKNLYILVVVDYVSKWVEAIASPKNDSAVVM 614
Query: 1377 KMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNR 1436
K+FK +IFP FGVPR+VISDGG HFI+K KLL + GV+H+VATPYHPQTSGQVEVSNR
Sbjct: 615 KLFKCIIFPHFGVPRIVISDGGKHFINKILTKLLLQYGVQHRVATPYHPQTSGQVEVSNR 674
Query: 1437 QIKAILEKTVS 1447
QIK ILEKTV+
Sbjct: 675 QIKEILEKTVA 685
Score = 40.4 bits (93), Expect = 0.008
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 728 MHRILLEDDYKPSIEHQRRLNPNMKEVVKKEVL 760
MHRI LED+ K S+EHQRRLN K+ ++K +L
Sbjct: 1 MHRIHLEDESKSSVEHQRRLNLIQKKRLRKRLL 33
>At2g06320 putative retroelement pol polyprotein
Length = 466
Score = 387 bits (994), Expect = e-107
Identities = 176/255 (69%), Positives = 208/255 (81%)
Query: 1200 APWYADFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESEV 1259
+PWYAD VN+LA G+ PP L ++K FF D+ HYYWDEPYL+ D I+R + E EV
Sbjct: 37 SPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYLYTLCKDKIYRSYVSEDEV 96
Query: 1260 SSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNE 1319
IL HCH S+YGGH +T KT KIL +GFWWP++FKD F+SKCD CQR G+I++RNE
Sbjct: 97 EGILLHCHDSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNE 156
Query: 1320 MPLNNILEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIASPTNDAQVVIKMF 1379
MP N ILEV+IFDVWG+DFMGPFPSS+GN+YILV VDYVSKWVEAIASPTNDA+VV+K+F
Sbjct: 157 MPQNPILEVDIFDVWGIDFMGPFPSSYGNKYILVVVDYVSKWVEAIASPTNDAKVVLKLF 216
Query: 1380 KKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNRQIK 1439
K +IFPRFGV VVISDGG HFI+K FE LL+K GV+HKVATPYHPQTSGQVE+SNR+IK
Sbjct: 217 KTIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKHKVATPYHPQTSGQVEISNREIK 276
Query: 1440 AILEKTVSTSRTDWS 1454
ILEKTV +R DWS
Sbjct: 277 TILEKTVGITRKDWS 291
>At2g11680 putative retroelement pol polyprotein
Length = 301
Score = 365 bits (937), Expect = e-100
Identities = 177/303 (58%), Positives = 229/303 (75%), Gaps = 20/303 (6%)
Query: 950 MVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSIT 1009
MVREGIVLGH +S +G++V++AKV+++ ++ PP + K+IRSFLGHAGFYRRFIKDFS +
Sbjct: 1 MVREGIVLGHKISKKGVQVNKAKVDVMMQLQPPKTGKDIRSFLGHAGFYRRFIKDFSKLA 60
Query: 1010 KPLTNLLLKDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVL 1069
+PLT LL K+A+F F++ CL AF KEAL++API+Q P+ + PFEIMCD SDYAVG VL
Sbjct: 61 RPLTRLLCKEAEFIFEEECLTAFKSTKEALVSAPIVQAPNRDYPFEIMCDDSDYAVGAVL 120
Query: 1070 GQRKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAI 1129
GQ+ D+K+H IYYAS T+D QV YATTEKELLAVV+A +KFR YLVGSK+ VYTDH+A+
Sbjct: 121 GQKIDRKLHVIYYASGTMDDTQVRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAAL 180
Query: 1130 KYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPD 1189
+++ KKD KPRL+RWILLLQEFD+EI DKKG+EN VADHLSR+R +DE+P+DDS P+
Sbjct: 181 RHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGVADHLSRMR--IEDEVPIDDSMPE 238
Query: 1190 DQLFLLAQTDAP------------------WYADFVNFLAAGVLPPELNYQQKKKFFNDL 1231
+QL + Q + WYAD V +L G PP L+ +KKKFF D+
Sbjct: 239 EQLMAIQQLNESAQINKSLDQVCAVEDKLMWYADHVKYLFGGEEPPNLSSYEKKKFFKDI 298
Query: 1232 KHY 1234
H+
Sbjct: 299 NHF 301
>At2g13060 pseudogene
Length = 930
Score = 361 bits (926), Expect = 2e-99
Identities = 168/258 (65%), Positives = 201/258 (77%)
Query: 1197 QTDAPWYADFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPE 1256
+ D PWYAD VN+LAA V P KK+F +++ Y WDEPYL++ DGI+RRCI
Sbjct: 133 EKDYPWYADIVNYLAADVEPDNFTDYNKKRFLREIRRYQWDEPYLYKHSYDGIYRRCIAA 192
Query: 1257 SEVSSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITK 1316
+EV SIL+HCHSSSYGGH +T KT K+L + FWWP++F+D FIS+CD CQR G I+K
Sbjct: 193 TEVPSILSHCHSSSYGGHFATFKTVSKVLQADFWWPTMFRDTQKFISQCDPCQRRGKISK 252
Query: 1317 RNEMPLNNILEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIASPTNDAQVVI 1376
RNEMP N LEVE+FD WG+DFMGPFP S N YILV VDYVSKWVEAIAS ND+ VV+
Sbjct: 253 RNEMPPNFRLEVEVFDRWGIDFMGPFPPSNKNLYILVDVDYVSKWVEAIASLKNDSAVVM 312
Query: 1377 KMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNR 1436
K+FK +IFPRFGVPR+VISDG HFI+K EKLL + GV+H+VATPYHPQTSGQVEVSNR
Sbjct: 313 KLFKSIIFPRFGVPRIVISDGDKHFINKILEKLLLQYGVQHRVATPYHPQTSGQVEVSNR 372
Query: 1437 QIKAILEKTVSTSRTDWS 1454
QIK ILEKTV ++ +WS
Sbjct: 373 QIKEILEKTVGKAKKEWS 390
Score = 83.6 bits (205), Expect = 8e-16
Identities = 37/63 (58%), Positives = 53/63 (83%), Gaps = 2/63 (3%)
Query: 1133 LNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPDDQL 1192
+ KKDAKPRL+ WILLLQEFD+E++DKKGVEN VADHLSR+R D++P++D P++ +
Sbjct: 1 MQKKDAKPRLLIWILLLQEFDIEVRDKKGVENGVADHLSRIR--IDDDVPINDFLPEENI 58
Query: 1193 FLL 1195
+++
Sbjct: 59 YMI 61
>At2g10780 pseudogene
Length = 1611
Score = 351 bits (901), Expect = 2e-96
Identities = 235/742 (31%), Positives = 379/742 (50%), Gaps = 54/742 (7%)
Query: 731 ILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGGLT 790
I LE P + R+ P +KK++ +LLD G I P S S W +PV V KK G
Sbjct: 651 IELEPGTTPISKAPYRMAPAEMAKLKKQLEELLDKGFIRP-SSSPWGAPVLFVKKKDG-- 707
Query: 791 VIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGY 850
+R+CIDYR LNK T K+ +PLP ID+++++L F +D
Sbjct: 708 ----------------SFRLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLA 751
Query: 851 SGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVF 910
SG+ QIPI P D KT F + F + MPFGL NAPA F + M +F DF+++ + +F
Sbjct: 752 SGYHQIPIEPTDVRKTAFRTRYDHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIF 811
Query: 911 MDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDR 970
++D V+ +++ +L VLER + L KC F R LGH++SD+G+ VD
Sbjct: 812 INDILVYSKSWEAHQEHLRAVLERLREHELFAKLSKCSFWQRSVGFLGHVISDQGVSVDP 871
Query: 971 AKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQ 1030
K+ I++ P + EIRSFLG AG+YRRF+ F+S+ +PLT L KD F + D C +
Sbjct: 872 EKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEK 931
Query: 1031 AFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGA 1090
+F LK L AP++ P+ P+ + DAS +G VL Q K I YAS+ L
Sbjct: 932 SFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVGLGCVLMQ----KGSVIAYASRQLRKH 987
Query: 1091 QVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILLLQ 1150
+ NY T + E+ AVV+ + +R YL G+K+ +YTDH ++KY+ + + R RW+ L+
Sbjct: 988 EKNYPTHDLEMAAVVFFLKIWRSYLYGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVA 1047
Query: 1151 EFDLEIKDKKGVENVVADHLSRLR---EANKDELPLDDSFPDDQLFLLAQTDAP---WYA 1204
+++L+I G N VAD LSR R EA + ++ L + + L++ P A
Sbjct: 1048 DYNLDIAYHPGKANQVADALSRRRSEVEAERSQVDLVNMMGTLHVNALSKEVEPLGLGAA 1107
Query: 1205 DFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIF----RRCIPESEV- 1259
D + L+ L E + ++K + + ++ ++G R C+P
Sbjct: 1108 DQADLLSRIRLAQERD--------EEIKGWAQNNKTEYQTSNNGTIVVNGRVCVPNDRAL 1159
Query: 1260 -SSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRN 1318
IL H S + H + K ++ L + W + KDV +++KC CQ + +
Sbjct: 1160 KEEILREAHQSKFSIHPGSNK-MYRDLKRYYHWVGMKKDVARWVAKCPTCQ---LVKAEH 1215
Query: 1319 EMPLNNILEVEI----FDVWGVDFMGPFPSSFGNQY--ILVAVDYVSKWVEAIA-SPTND 1371
++P + + I +D +DF+ P+ +++ + V VD ++K +A S +
Sbjct: 1216 QVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISDKDG 1275
Query: 1372 AQVVIKMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQV 1431
A+++ + + I G+P ++SD + F SK ++ + LG R ++T YHPQT Q
Sbjct: 1276 AEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDEQS 1335
Query: 1432 EVSNRQIKAILEKTVSTSRTDW 1453
E + + ++ +L V +W
Sbjct: 1336 ERTIQTLEDMLRACVLDWGGNW 1357
Score = 39.7 bits (91), Expect = 0.013
Identities = 20/84 (23%), Positives = 44/84 (51%), Gaps = 3/84 (3%)
Query: 500 LQLADRSVKYPAGIIEDVPVKVGEVYIPADFVVMEMEEDNQVPILLGRPFLATAGAIIDV 559
++ A YP G++ + V V V +PAD +++ +++ + ++LG +L A ID
Sbjct: 507 VRAAGGQAMYPTGLVRGISVVVNGVNMPADLIIVPLKKHD---VILGMDWLGKYKAHIDC 563
Query: 560 KKGKLAFNVGKETVEFELAKLMKG 583
+G++ F + ++F+ + G
Sbjct: 564 HRGRIQFERDEGMLKFQGIRTTSG 587
>At3g11970 hypothetical protein
Length = 1499
Score = 347 bits (890), Expect = 3e-95
Identities = 239/718 (33%), Positives = 362/718 (50%), Gaps = 47/718 (6%)
Query: 729 HRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGG 788
H+I L + P + R + + K + K V LL G + S S + SPV +V KK G
Sbjct: 591 HKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQA-SSSPYASPVVLVKKKDG 649
Query: 789 LTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLD 848
WR+C+DYR+LN T KD FP+P I+ +++ L F +D
Sbjct: 650 T------------------WRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 849 GYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIME 908
+G+ Q+ + P+D +KT F G F Y MPFGL NAPATFQ M IF F+ K +
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 909 VFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEV 968
VF DD V+ S+ ++ +L++V E L KC F V + LGH +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 969 DRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSC 1028
D AK++ +++ PT++K++R FLG AG+YRRF++ F I PL L DA F +
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDA-FEWTAVA 870
Query: 1029 LQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLD 1088
QAF LK AL AP++ P ++ F + DA +G VL Q + H + Y S+ L
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQ----EGHPLAYISRQLK 926
Query: 1089 GAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILL 1148
G Q++ + EKELLAV++A+ K+R YL+ S I+ TD ++KYLL ++ P +W+
Sbjct: 927 GKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPK 986
Query: 1149 LQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPDDQLFLLAQTDAPWYADFVN 1208
L EFD EI+ ++G ENVVAD LSR+ + L + + + L Q + +
Sbjct: 987 LLEFDYEIQYRQGKENVVADALSRVE--GSEVLHMAMTVVECDLLKDIQAGYANDSQLQD 1044
Query: 1209 FLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESE--VSSILTHC 1266
+ A P+ KK+F+ W + L R+ + +P ++ ++IL
Sbjct: 1045 IITALQRDPD-----SKKYFS------WSQNILRRKS-----KIVVPANDNIKNTILLWL 1088
Query: 1267 HSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMPLNNI- 1325
H S GGH+ T ++ F+W + KD+ +I C CQ+ S + L +
Sbjct: 1089 HGSGVGGHSGRDVTHQRV-KGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLP 1147
Query: 1326 LEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIA-SPTNDAQVVIKMFKKVIF 1384
+ I+ +DF+ P S G I+V VD +SK IA S A V + +F
Sbjct: 1148 IPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVF 1207
Query: 1385 PRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNRQIKAIL 1442
G P ++SD F S+ + + GV K+ + YHPQ+ GQ EV NR ++ L
Sbjct: 1208 KLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYL 1265
>At1g36590 hypothetical protein
Length = 1499
Score = 342 bits (878), Expect = 7e-94
Identities = 238/718 (33%), Positives = 362/718 (50%), Gaps = 47/718 (6%)
Query: 729 HRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGG 788
H+I L + P + R + + K + K V LL G + S S + SPV +V KK G
Sbjct: 591 HKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQA-SSSPYASPVVLVKKKDG 649
Query: 789 LTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLD 848
WR+C+DYR+LN T KD FP+P I+ +++ L F +D
Sbjct: 650 T------------------WRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 849 GYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIME 908
+G+ Q+ + P+D +KT F G F Y MPFGL NAPATFQ M IF F+ K +
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 909 VFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEV 968
VF DD V+ S+ ++ +L++V E L KC F V + LGH +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 969 DRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSC 1028
D AK++ +++ PT++K++R FLG AG+YRRF++ F I PL L DA F +
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDA-FEWTAVA 870
Query: 1029 LQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLD 1088
QAF LK AL AP++ P ++ F + DA +G VL Q + H + Y S+ L
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQ----EGHPLAYISRQLK 926
Query: 1089 GAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILL 1148
G Q++ + EKELLAV++A+ K+R YL+ S I+ TD ++KYLL ++ P +W+
Sbjct: 927 GKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPK 986
Query: 1149 LQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPDDQLFLLAQTDAPWYADFVN 1208
L EFD EI+ ++G ENVVAD LSR+ + L + + + L Q + +
Sbjct: 987 LLEFDYEIQYRQGKENVVADALSRVE--GSEVLHMAMTVVECDLLKDIQAGYANDSQLQD 1044
Query: 1209 FLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESE--VSSILTHC 1266
+ A P+ KK+F+ W + L R+ + +P ++ ++IL
Sbjct: 1045 IITALQRDPD-----SKKYFS------WSQNILRRKS-----KIVVPANDNIKNTILLWL 1088
Query: 1267 HSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMPLNNI- 1325
H S GGH+ T ++ F+ + KD+ +I C CQ+ S + L +
Sbjct: 1089 HGSGVGGHSGRDVTHQRV-KGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLP 1147
Query: 1326 LEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIA-SPTNDAQVVIKMFKKVIF 1384
+ I+ +DF+ P S G I+V VD +SK IA S A V + + +F
Sbjct: 1148 IPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAQAYLDNVF 1207
Query: 1385 PRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNRQIKAIL 1442
G P ++SD F S+ + + GV K+ + YHPQ+ GQ EV NR ++ L
Sbjct: 1208 KLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYL 1265
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 333 bits (853), Expect = 6e-91
Identities = 235/741 (31%), Positives = 362/741 (48%), Gaps = 66/741 (8%)
Query: 719 IKGINPSLC-MHRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWV 777
++G+ PS I LE P + R+ P +KK++ LL G I P S S W
Sbjct: 496 LQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMTELKKQLEDLLGKGFIRP-STSPWG 554
Query: 778 SPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLER 837
+PV V KK G +R+CIDYR LN T K+ +PLP ID++L++
Sbjct: 555 APVLFVKKKDG------------------SFRLCIDYRGLNWVTVKNKYPLPRIDELLDQ 596
Query: 838 LAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMS 897
L + F +D SG+ QIPI D KT F +G F + MPF L NAPA F R M S
Sbjct: 597 LRGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNS 656
Query: 898 IFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVL 957
+F +F+++ + +F+DD V+ + ++ +L +V+E+ + L KC F RE L
Sbjct: 657 VFQEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFL 716
Query: 958 GHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLL 1017
GH+VS G+ VD K+E I PT+ EIRSFL G+YRRF+K F+S+ +P+T L
Sbjct: 717 GHIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTG 776
Query: 1018 KDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKM 1077
KD F + C + F LKE L + P++ P+ P+ + DAS +G VL QR
Sbjct: 777 KDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQRG---- 832
Query: 1078 HAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKD 1137
I YAS+ L + NY T + E+ V++A+ +R YL G K+ V+TDH ++KY+ N+ +
Sbjct: 833 KVIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQPE 892
Query: 1138 AKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPD-DQLFLLA 1196
R +RW+ L+ ++DLEI G NVVAD LSR R ++ + L L
Sbjct: 893 LNLRQMRWMELVADYDLEIAYHPGKANVVADALSRKRVGAAPGQSVEALVSEIGALRLCV 952
Query: 1197 QTDAPWYADFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRR-CIP 1255
P + V+ A +L Q+K + E G+ ++ R C+P
Sbjct: 953 VAREPLGLEAVD--RADLLTRARLAQEKDEGLIAASKAEGSEYQFAANGTIFVYGRVCVP 1010
Query: 1256 ESEV--SSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGS 1313
+ E IL+ H+S + H K ++ L + W + +DV ++++CD CQ
Sbjct: 1011 KDEELRREILSEAHASMFSIHPGATK-MYRDLKRYYQWVGMKRDVANWVAECDVCQ---L 1066
Query: 1314 ITKRNEMPLNNILEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIA-SPTNDA 1372
+ +++P I V +D ++K +A T+ A
Sbjct: 1067 VKAEHQVP---------------------------DAIWVIMDRLTKSAHFLAIRKTDGA 1099
Query: 1373 QVVIKMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVE 1432
V+ K + I GVP ++SD S F + K+G + +++T YHPQT GQ E
Sbjct: 1100 AVLAKKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTDGQSE 1159
Query: 1433 VSNRQIKAILEKTVSTSRTDW 1453
+ + ++ +L V DW
Sbjct: 1160 RTIQTLEDMLRMCV----LDW 1176
>At1g35370 hypothetical protein
Length = 1447
Score = 330 bits (845), Expect = 5e-90
Identities = 232/719 (32%), Positives = 360/719 (49%), Gaps = 57/719 (7%)
Query: 729 HRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGG 788
H+I L + P + R + K+ + K V ++ +G I +S S + SPV +V KK G
Sbjct: 570 HKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQ-VSSSPFASPVVLVKKKDG 628
Query: 789 LTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLD 848
WR+C+DY +LN T KD F +P I+ +++ L F +D
Sbjct: 629 T------------------WRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKID 670
Query: 849 GYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIME 908
+G+ Q+ + P+D +KT F G F Y M FGL NAPATFQ M S+F DF+ K +
Sbjct: 671 LRAGYHQVRMDPDDIQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVL 730
Query: 909 VFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEV 968
VF DD ++ S+ ++ +L V E L K H LGH +S R IE
Sbjct: 731 VFFDDILIYSSSIEEHKEHLRLVFEVMRLHKLFAKGSKEH--------LGHFISAREIET 782
Query: 969 DRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSC 1028
D AK++ +++ PT+VK++R FLG AG+YRRF+++F I PL + L K F +
Sbjct: 783 DPAKIQAVKEWPTPTTVKQVRGFLGFAGYYRRFVRNFGVIAGPL-HALTKTDGFCWSLEA 841
Query: 1029 LQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLD 1088
AF LK L AP++ P ++ F + DA + VL Q K H + Y S+ L
Sbjct: 842 QSAFDTLKAVLCNAPVLALPVFDKQFMVETDACGQGIRAVLMQ----KGHPLAYISRQLK 897
Query: 1089 GAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILL 1148
G Q++ + EKELLA ++A+ K+R YL+ S I+ TD ++KYLL ++ P +W+
Sbjct: 898 GKQLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPK 957
Query: 1149 LQEFDLEIKDKKGVENVVADHLSRLREANKDELPLDDSFPDDQLFLLAQTDAPWYADFVN 1208
L EFD EI+ ++G EN+VAD LSR+ + + L D L + + +D
Sbjct: 958 LLEFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECD----FLKEIQVAYESD--- 1010
Query: 1209 FLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESE--VSSILTHC 1266
GVL ++ Q+ + KHY W + L R+ + +P + +L
Sbjct: 1011 ----GVLKDIISALQQHP--DAKKHYSWSQDILRRKS-----KIVVPNDVEITNKLLQWL 1059
Query: 1267 HSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMPLNNI- 1325
H S GG S + S + + S F+W + KD+ FI C CQ+ S L +
Sbjct: 1060 HCSGMGGR-SGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPLP 1118
Query: 1326 LEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVE--AIASPTNDAQVVIKMFKKVI 1383
+ +I+ +DF+ P+S G I+V VD +SK A+A P + A V + F +
Sbjct: 1119 IPDKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYS-ALTVAQAFLDNV 1177
Query: 1384 FPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNRQIKAIL 1442
+ G P ++SD F S +++ + GV ++++ YHPQ+ GQ EV NR ++ L
Sbjct: 1178 YKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYL 1236
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 300 bits (768), Expect = 4e-81
Identities = 175/457 (38%), Positives = 254/457 (55%), Gaps = 24/457 (5%)
Query: 719 IKGINPSLC-MHRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWV 777
++G+ PS I LE P + R+ P +KK++ LL G I P S S W
Sbjct: 470 LQGLPPSQSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRP-STSPWG 528
Query: 778 SPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLER 837
+PV V KK G +R+CIDYR+LN+ T K+ +PLP ID++L++
Sbjct: 529 APVLFVKKKDG------------------SFRLCIDYRELNRVTVKNRYPLPRIDELLDQ 570
Query: 838 LAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMS 897
L + F +D SG+ QIPI D KT F +G F + MPFGL NAPA F R M S
Sbjct: 571 LRGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNS 630
Query: 898 IFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVL 957
+F +F+++ + +F+DD V+ + ++ +L +V+E+ + L KC F RE L
Sbjct: 631 VFQEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFL 690
Query: 958 GHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLL 1017
GH+VS G+ VD K+E I PT+ EIRSFLG AG+YRRF+K F+S+ +P+T L
Sbjct: 691 GHIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTG 750
Query: 1018 KDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKM 1077
KD F + C + F LKE L + P++ P+ P+ + DAS +G VL Q
Sbjct: 751 KDVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHG---- 806
Query: 1078 HAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKD 1137
I YAS+ L + NY T + E+ AV++A+ +R YL G K+ V+TDH ++KY+ + +
Sbjct: 807 KVIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQPE 866
Query: 1138 AKPRLIRWILLLQEFDLEIKDKKGVENVVADHLSRLR 1174
R RW+ L+ ++DLEI G NVV D LSR R
Sbjct: 867 LNLRQRRWMELVADYDLEIAYHPGKANVVVDALSRKR 903
Score = 31.2 bits (69), Expect = 4.6
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 1282 FKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMPLNNILEVEIFDVWGVDFMG- 1340
++ L + W + DV ++++CD CQ + K L +L+ W DF+
Sbjct: 962 YRDLKRYYQWVGMKMDVANWVAECDVCQ----LVKAEHQVLGGMLQSLPIPEWKWDFITM 1017
Query: 1341 ----PFPSSFGNQYILVAVDYVSKWVEAIA-SPTNDAQVVIKMFKKVIFPRFGVP 1390
S I V VD ++K +A T+ A V+ K F I GVP
Sbjct: 1018 DLVVGLRVSRTKDAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEIVKLHGVP 1072
>At3g31340 Athila ORF 1, putative
Length = 781
Score = 298 bits (762), Expect = 2e-80
Identities = 217/684 (31%), Positives = 334/684 (48%), Gaps = 75/684 (10%)
Query: 1 NQFSGSPSEDPNLHISNF---WRLSVTCKDDQETVRLHLFPFSLKNKASNWFNSLKPGSI 57
NQF SE+ H+ NF R++ + ++ LF FSL + A W SL P ++
Sbjct: 100 NQFFVHSSENHVYHLDNFEDICRITRMNGVPDDIIKCRLFIFSLADNAHRWLKSLDPINL 159
Query: 58 TSWDQLRREFLCRFFPPSKTAQLRGKLYQFTQMNGESLFDVWERFKEILRRCPHHGLEKW 117
SW+ + FL ++F S+TA LR K+ F Q ES + WERFK+ R CPHHG +
Sbjct: 160 RSWEDYKAAFLGQYFTQSRTAILRNKISSFQQGGTESFPEAWERFKDYYRECPHHGFSRA 219
Query: 118 LIIHIFYNGLTSSTKLTIDAAAGGALMNKDFTTAYALIENMALNLFQWTEEKETVDPSPS 177
+I FY G+ + K+ +D A+ G M K T A LI+N+A + VD S
Sbjct: 220 TLISTFYQGVDKAYKMALDTASNGDFMTKTETEATKLIKNLAASNIN-----HNVDYDRS 274
Query: 178 EKEAGINETSSIDYLSTKLNALSQRLDRMSTPTFSPPCETCGLSSHSDTDCNLTSVEQLN 237
+ G E + LS K+ L +R ++ F + DC+ ++N
Sbjct: 275 NRGGG-GELKQLAELSVKVEQLLRRDQKVIN--FCEDSSKGMVHQEYSGDCSEDLQAEMN 331
Query: 238 FVQNGQRVVQK---------SHIELLMKNLFFKQSEQLQELKDQTRLLNNSLATLTTKID 288
FV NG R +Q S + +K + + LQ++ + L + A + K+D
Sbjct: 332 FV-NGIRYIQLRQAHKVQNFSPTDFRIKGTI-RDNSNLQQILEG---LKKNAADINVKVD 386
Query: 289 SIY-----------SHNKISETQLSQVVRKAGHPNKMNAVTLRSGKPLEDPIRRTETDHS 337
S+Y SH K E Q+SQVV + P SGK I + +
Sbjct: 387 SMYNDLNVKFATLSSHVKTLENQVSQVVSASMRP-----AGAHSGKEEPREIDVAKQVET 441
Query: 338 EKEIREPPSRETRAEKEEPRVEGNTTPPFKPKIPFP--QRFAKSKLDEQFKKFMEMMNKI 395
+ E + E +EP E PP+ PK+PFP +R +S+ E++ +E +
Sbjct: 442 NAVVVETLVEDKIVEDDEPLSE--EPPPYVPKLPFPGRERQIQSRKREEYALLVESQRQ- 498
Query: 396 YIDVPFTEVLTQMPTYAKFLKEILSKKRKIEESETVNLTEECSAIIQNKLPPKLKDPGSF 455
+ T+V+ E+L+ K + CSAI +P KL DPGSF
Sbjct: 499 QKEAQLTDVV-----------EVLAGKEMVST---------CSAIPPATIPEKLGDPGSF 538
Query: 456 SIPCVIGSEVVKKAMCDLGASVSLMPLSLYERLGIGELKSTRMTLQLADRSVKYPAGIIE 515
+PC IG ++ +CDLGA V+LMPLS+ +RLGI K +R++L LADRSV++P G+ E
Sbjct: 539 VLPCRIGKSAFERCLCDLGAGVNLMPLSMSKRLGITNFKPSRISLILADRSVRFPVGLAE 598
Query: 516 DVPVKVGEVYIPADFVVMEMEEDNQVPILLGRPFLATAGAIIDVKKGKLAFNVGKETVEF 575
+V V+VG+ YIP DFVV+E++++ P+ LGRPFL T GAIIDV++ + +G +EF
Sbjct: 599 NVHVRVGDFYIPTDFVVLELDKEPHDPLTLGRPFLNTVGAIIDVRRSTINLQIGDFALEF 658
Query: 576 ELAKLMKGPSIKDSCCMIDIIDHCVKECSLASTTHDGLEVCLVNNAGTKLEGEAKAYEVL 635
++ K P+I+ +D D EC+ D +E+ V L+G+ K V
Sbjct: 659 DMKGTRKNPTIEGHAFSVDTNDEPGAECA-----KDCIELSDVEEV---LDGDTKDAHVT 710
Query: 636 LDRTPPIKDLSVEELIKEEPTLQP 659
L + D ++E ++ + T +P
Sbjct: 711 LIPLQRVGD-TIEYKVQSKGTSKP 733
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 277 bits (708), Expect = 4e-74
Identities = 177/512 (34%), Positives = 263/512 (50%), Gaps = 41/512 (8%)
Query: 664 KVELKTLPSNLRYEFLGPNSTYPVIVNASLDEVETEKLLYVLKKYPKAIGYTIDDIKGIN 723
+V + +L Y+ + P S VI V+ EK++ + ++G+
Sbjct: 407 RVSFERPEGSLVYQGVRPTSGSLVI-----SAVQAEKMIEKGCEAYLEFEDVFQSLQGLP 461
Query: 724 PSLC-MHRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQV 782
PS I LE P + R+ P +KK++ LL A PV
Sbjct: 462 PSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLLGA-------------PVLF 508
Query: 783 VPKKGGLTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHS 842
V KK G +R+CIDYR LN T K+ +PLP ID++L++L +
Sbjct: 509 VKKKDG------------------SFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGAT 550
Query: 843 HFCYLDGYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDF 902
F +D SG+ IPI D KT F +G F + MPFGL NAPA F R M S+F +
Sbjct: 551 CFSKIDLTSGYHLIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEV 610
Query: 903 VEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVS 962
+++ + +F+DD V+ + ++ +L +V+E+ + L KC F RE LGH+VS
Sbjct: 611 LDEFVIIFIDDILVYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVS 670
Query: 963 DRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADF 1022
G+ VD K+E I PT+ EIRSFLG AG+YRRF+K F+S+ +P+T L KD F
Sbjct: 671 AEGVSVDPEKIEAIRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPF 730
Query: 1023 TFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYY 1082
+ C + F LKE L + P++ P+ P+ + DAS +G VL QR I Y
Sbjct: 731 VWSPECEEGFVSLKEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRG----KVIAY 786
Query: 1083 ASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRL 1142
AS+ L + NY T + E+ AV++A+ +R YL G + V+TDH ++KY+ + + R
Sbjct: 787 ASRQLRKHEGNYPTHDLEMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQ 846
Query: 1143 IRWILLLQEFDLEIKDKKGVENVVADHLSRLR 1174
+W+ L+ ++DLEI G NVVAD LS R
Sbjct: 847 RQWMELVADYDLEIAYHPGKANVVADALSHKR 878
Score = 61.6 bits (148), Expect = 3e-09
Identities = 46/163 (28%), Positives = 80/163 (48%), Gaps = 12/163 (7%)
Query: 1296 KDVHLFISKCDKCQRTGSITKRNEMPLNNILEVEI----FDVWGVDFMGPFPSSFGNQYI 1351
+DV ++++CD CQ + +++P + + I +D +DF+ P S I
Sbjct: 941 EDVANWVAECDVCQL---VKAEHQVPGGMLQSLPIPEWKWDFITIDFVVGLPVSRTKDAI 997
Query: 1352 LVAVDYVSKWVEAIA-SPTNDAQVVIKMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLL 1410
V VD ++K +A T+ A V+ K + I GVP ++SD S F S +
Sbjct: 998 WVIVDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQ 1057
Query: 1411 QKLGVRHKVATPYHPQTSGQVEVSNRQIKAILEKTVSTSRTDW 1453
++G + +++T YHPQT GQ E + + ++ +L V DW
Sbjct: 1058 AEMGTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCV----LDW 1096
>At1g20390 hypothetical protein
Length = 1791
Score = 270 bits (689), Expect = 6e-72
Identities = 168/520 (32%), Positives = 269/520 (51%), Gaps = 24/520 (4%)
Query: 659 PKEAPKVELKTLPSNL-RYEFLGPNSTYP---VIVNASLDEVETEKLLYVLKKYPKAIGY 714
PKEA S L R E + + + P V V A + +L+ +LK+ K +
Sbjct: 693 PKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAW 752
Query: 715 TIDDIKGINPSLCMHRILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDS 774
+I+D+KGI+P++ H + ++ +KP + +R+L P V +EV KLL AG I +
Sbjct: 753 SIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYP 812
Query: 775 KWVSPVQVVPKKGGLTVIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQM 834
+W++ VV KK G WR+C+DY LNKA KD +PLP ID++
Sbjct: 813 EWLANPVVVKKKNGK------------------WRVCVDYTDLNKACPKDSYPLPHIDRL 854
Query: 835 LERLAKHSHFCYLDGYSGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRC 894
+E + + ++D +SG+ QI +H +DQEKT+F GT+ Y+ M FGL NA AT+QR
Sbjct: 855 VEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRF 914
Query: 895 MMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREG 954
+ + +D + + +EV++DD V +D + +L K + + LN KC F V G
Sbjct: 915 VNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSG 974
Query: 955 IVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTN 1014
LG++V+ RGIE + ++ I ++ P + +E++ G RFI + P N
Sbjct: 975 EFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYN 1034
Query: 1015 LLLKDADFTFDDSCLQAFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKD 1074
LL + A F +D +AF +LK+ L T PI+ P+ + SD+AV VL +
Sbjct: 1035 LLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDR 1094
Query: 1075 KKMHAIYYASKTLDGAQVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLN 1134
+ I+Y SK+L A+ Y EK LAVV + K R Y I V TD ++ L+
Sbjct: 1095 GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTD-QPLRVALH 1153
Query: 1135 KKDAKPRLIRWILLLQEFDLEIKDKKGVEN-VVADHLSRL 1173
R+ +W + L E+D++ + + +++ V+AD L L
Sbjct: 1154 SPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIEL 1193
Score = 134 bits (336), Expect = 5e-31
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 1202 WYADFVNFLAAGVLPPELNYQQKKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESEVSS 1261
W + ++L+ G LP + + ++ K+ E +L + + G C+ +E++
Sbjct: 1380 WRVEIRDYLSDGTLPSD-KWTARRLRIKAAKYTLMKE-HLLKVSAFGAMLNCLHGTEINE 1437
Query: 1262 ILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRNEMP 1321
I+ H + G H+ + + K+ GF+WP++ D F +KC++CQR +
Sbjct: 1438 IMKETHEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTEL 1497
Query: 1322 LNNILEVEIFDVWGVDFMGPFPSSFGNQYILVAVDYVSKWVEAIASPTNDAQVVIKMFKK 1381
L + F W +D +GP P+S ++ILV DY +KWVEA + T A V K
Sbjct: 1498 LRAGVAPYPFMRWAMDIVGPMPASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWK 1557
Query: 1382 VIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVATPYHPQTSGQVEVSNRQIKAI 1441
I R G+P +I+D GS FIS FE +R +TP +PQ +GQ E +N+ I +
Sbjct: 1558 FIICRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSG 1617
Query: 1442 LEKTVSTSRTDWS 1454
L+K + + W+
Sbjct: 1618 LKKRLDEKKGAWA 1630
Score = 45.4 bits (106), Expect = 2e-04
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 27 DDQETVRLHLFPFSLKNKASNWFNSLKPGSITSWDQLRREFLCRFFPPSKTAQLRGKLYQ 86
D+ + R +F L A NWF+ LKP SI S+ QL FL + P + L+
Sbjct: 202 DNFDAGRCQIFIEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLKHYAPLIENQTSNADLWS 261
Query: 87 FTQMNGESLFDVWERFKEIL 106
+Q ESL +RFK ++
Sbjct: 262 ISQGAKESLRSFVDRFKLVV 281
>At2g06890 putative retroelement integrase
Length = 1215
Score = 267 bits (682), Expect = 4e-71
Identities = 173/516 (33%), Positives = 266/516 (51%), Gaps = 38/516 (7%)
Query: 808 WRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGYSGFFQIPIHPNDQEKTT 867
WRMC D R +N T K P+P +D ML+ L S F +D SG+ QI ++ D+ KT
Sbjct: 469 WRMCFDCRAINNVTVKYCHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRMNEGDEWKTA 528
Query: 868 FTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVFMDDFSVHGSNFDDCLTN 927
F G + + MPFGL +AP+TF R M + F+ + V+ DD V+ + + + +
Sbjct: 529 FKTKHGLYEWLVMPFGLTHAPSTFMRLMNHVLRAFIGIFVIVYFDDILVYSESLREHIEH 588
Query: 928 LEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDRAKVEIIEKMLPPTSVKE 987
L+ VL + L N +KC F + LG +VS G++VD KV+ I P +V E
Sbjct: 589 LDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGE 648
Query: 988 IRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQAFCRLKEALITAPIIQP 1047
+RSF G AGFYRRF KDFS+I PLT ++ KD F ++ + +AF LK+ L AP++
Sbjct: 649 VRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPVLIL 708
Query: 1048 PDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGAQVNYATTEKELLAVVYA 1107
++ FEI CDAS +G VL Q D+K+ A + S+ L GA +NY T +KEL A+V A
Sbjct: 709 SEFLKTFEIECDASGIGIGAVLMQ--DQKLIAFF--SEKLGGATLNYPTYDKELYALVRA 764
Query: 1108 IDKFRQYLVGSKIIVYTDHSAIKYLLNKKDAKPRLIRWILLLQEFDLEIKDKKGVENVVA 1167
+ +++ YL +++TDH ++K+L ++ R RW+ ++ F IK KKG +NVVA
Sbjct: 765 LQRWQHYLWPKVFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVA 824
Query: 1168 DHLSR----LREANKDELPLDDSFPDDQLFLLAQTDAPWYADFVNFLAAGVLPPELNYQQ 1223
D LS+ L N + +Q+ + +TD DF Y+
Sbjct: 825 DALSQRYTLLSTLNVKLMGF------EQIKEVYETD----HDFQEV-----------YKA 863
Query: 1224 KKKFFNDLKHYYWDEPYLFRRGSDGIFRRCIPESEVSSI-LTHCHSSSYGGHASTQKTSF 1282
+KF + Y+ + +LF R C+P + + + H GH KT
Sbjct: 864 CEKFASG--RYFRQDKFLFYEN-----RLCVPNCSLRDLFVREAHGGGLMGHFGIAKT-L 915
Query: 1283 KILHSGFWWPSLFKDVHLFISKCDKCQRTGSITKRN 1318
+++ F WP + DV +C+ C++ S + N
Sbjct: 916 EVMTEHFRWPHMKCDVKRICGRCNTCKQAKSKIQPN 951
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 255 bits (652), Expect = 1e-67
Identities = 154/406 (37%), Positives = 220/406 (53%), Gaps = 25/406 (6%)
Query: 731 ILLEDDYKPSIEHQRRLNPNMKEVVKKEVLKLLDAGVIYPISDSKWVSPVQVVPKKGGLT 790
I LE P + R+ P +KK++ +LL G I P S S W +PV V KK G
Sbjct: 146 IELEPGTTPISKAPYRMAPAEMAELKKQLEELLAKGFIRP-SSSPWGAPVLFVKKKDG-- 202
Query: 791 VIKNDKNESIATRTVTGWRMCIDYRKLNKATRKDHFPLPFIDQMLERLAKHSHFCYLDGY 850
+R+CIDYR LNK T K+ +PLP ID+++++L F +D
Sbjct: 203 ----------------SFRLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLA 246
Query: 851 SGFFQIPIHPNDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMMSIFSDFVEKIMEVF 910
SG+ QIPI P D KT F +G F + MPFGL NAPA F + M +F DF+++ + +F
Sbjct: 247 SGYHQIPIEPTDVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIF 306
Query: 911 MDDFSVHGSNFDDCLTNLEKVLERCEQVNLVLNWEKCHFMVREGIVLGHLVSDRGIEVDR 970
+DD VH +++ +L VLER + L K F R LGH++SD+G+ VD
Sbjct: 307 IDDILVHSKSWEAHQEHLRAVLERLREHELFAKLSKFSFWQRSVGFLGHVISDQGVSVDP 366
Query: 971 AKVEIIEKMLPPTSVKEIRSFLGHAGFYRRFIKDFSSITKPLTNLLLKDADFTFDDSCLQ 1030
K+ I++ P + EIRSFLG AG+YRRF+ F+S+ +PLT L KD F + D C +
Sbjct: 367 EKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEK 426
Query: 1031 AFCRLKEALITAPIIQPPDWNLPFEIMCDASDYAVGVVLGQRKDKKMHAIYYASKTLDGA 1090
+F LK LI AP++ P+ P+ + DAS +G VL Q K I YAS+ L
Sbjct: 427 SFLELKAMLINAPVLVLPEEGEPYTVYTDASIVGLGCVLMQ----KGSVIAYASRQLRKH 482
Query: 1091 QVNYATTEKELLAVVYAIDKFRQYLVGSKIIVYTDHSAIKYLLNKK 1136
+ NY T + E+ AVV+A+ +R YL+ ++ D + LN K
Sbjct: 483 EKNYPTHDLEMAAVVFALKIWRSYLI--RLAQERDEEIKGWTLNNK 526
Score = 76.3 bits (186), Expect = 1e-13
Identities = 54/212 (25%), Positives = 100/212 (46%), Gaps = 13/212 (6%)
Query: 1251 RRCIPESEV--SSILTHCHSSSYGGHASTQKTSFKILHSGFWWPSLFKDVHLFISKCDKC 1308
R C+P IL H S + H + K ++ L + W + KDV +++KC C
Sbjct: 542 RVCVPNDRALKEEILREAHQSKFSIHPGSNKM-YRDLKRYYHWVGMRKDVARWVAKCPTC 600
Query: 1309 QRTGSITKRNEMPLNNILEVEI----FDVWGVDFMGPFPSSFGNQY--ILVAVDYVSKWV 1362
Q + +++P + + I +D +DF+ P+ +++ + V VD ++K
Sbjct: 601 QL---VKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSA 657
Query: 1363 EAIASPTND-AQVVIKMFKKVIFPRFGVPRVVISDGGSHFISKHFEKLLQKLGVRHKVAT 1421
+A D A+++ + + I G+P ++SD + F SK + + LG R ++T
Sbjct: 658 HFMAISDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLST 717
Query: 1422 PYHPQTSGQVEVSNRQIKAILEKTVSTSRTDW 1453
YHPQT GQ E + + ++ +L V +W
Sbjct: 718 AYHPQTDGQSERTIQTLEDMLRACVLDWGGNW 749
Score = 32.0 bits (71), Expect = 2.7
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 500 LQLADRSVKYPAGIIEDVPVKVGEVYIPADFVVMEMEEDNQVPILLGRPFLATAGAIIDV 559
++ A YP ++ + V V V +PAD +++ +++ + ++LG +L ID
Sbjct: 2 VRAAGGQAMYPTRLVRGISVVVNGVNMPADLIIVPLKKHD---VILGMDWLGKYKGHIDC 58
Query: 560 KKGKLAFNVGKETVEFELAKLMKG 583
+ ++ F + ++F+ + G
Sbjct: 59 HRERIQFERDEGMLKFQGIRTTSG 82
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,676,414
Number of Sequences: 26719
Number of extensions: 1522884
Number of successful extensions: 4965
Number of sequences better than 10.0: 186
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 4467
Number of HSP's gapped (non-prelim): 383
length of query: 1454
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1342
effective length of database: 8,326,068
effective search space: 11173583256
effective search space used: 11173583256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC135959.8