BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135797.3 - phase: 0 /pseudo
(460 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09470 unknown protein 412 e-115
At3g03620 unknown protein 32 0.56
At5g64280 2-oxoglutarate/malate translocator 32 0.96
At1g55020 unknown protein 31 1.6
At2g39060 similar to MtN3 protein 30 2.1
At5g16550 Unknown protein (MQK4.29) 30 2.8
At5g19640 peptide transport protein-like 30 3.6
At2g29650 Na+-dependent inorganic phosphate cotransporter like p... 30 3.6
At5g55950 unknown protein 29 4.8
At2g43070 unknown protein 29 4.8
At5g16740 putative protein 29 6.2
At1g64820 hypothetical protein 29 6.2
>At3g09470 unknown protein
Length = 437
Score = 412 bits (1059), Expect = e-115
Identities = 237/453 (52%), Positives = 298/453 (65%), Gaps = 34/453 (7%)
Query: 9 DEETPLVVATDESPIQFQQHKSHTRDVHILSIAFLLIFLAYGAAQNLQSTLNTASGELIV 68
DEE PL+ A+ E + + K +TRDVHILSI+FLLIFLAYGAAQNL++T+N G + +
Sbjct: 6 DEEAPLISASGEDR-KVRAGKCYTRDVHILSISFLLIFLAYGAAQNLETTVNKDLGTISL 64
Query: 69 CIEFSGGGFGYDFAWDIIFVFYIF------FCVCFFGGADSRIQECFDCWNFGLLVIPGC 122
I++V ++F V G ++ + W F +
Sbjct: 65 ---------------GILYVSFMFCSMVASLVVRLMGSKNALVLGTTGYWLFVAANLKPS 109
Query: 123 KFEAQLVYVGSGFCLSWVLRFYIMGWAACQGTYLTSTARSHAIDNNFHEGAVIGDFNGEF 182
F + GF S + W QGTYLTS ARSHA D+ HEG+VIG FNGEF
Sbjct: 110 WFTMVPASLYLGFAASII-------WVG-QGTYLTSIARSHATDHGLHEGSVIGVFNGEF 161
Query: 183 WGVYTLHQFIGNLITFALLSDGQEGSTNGTTLLFVVFLSVMTFGAILTCFLHK-RGDYSK 241
W ++ HQ GNLIT ALL DG+EGST+GTTLL +VFL MT G IL F+ K G+ K
Sbjct: 162 WAMFACHQLFGNLITLALLKDGKEGSTSGTTLLMLVFLFSMTLGTILMFFIRKIDGEDGK 221
Query: 242 GGYKHLDAGTGQSKSLKSLCRSLTGALSDVKMLLIIPLIAYSGLQHAFVWAEFTKYVVTP 301
G + + G SL SL R + L D++MLLI+PL+AYSGLQ AFVWAEFTK +VTP
Sbjct: 222 GP---VGSPVGLVDSLASLPRMIITPLLDIRMLLIVPLLAYSGLQQAFVWAEFTKEIVTP 278
Query: 302 EIGVSGVGIAMAVYGAFDGICSLVAGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMS 361
IGVSGVG AMAVYGA D +CS+ AGR T GL+SIT IVS GA QA V + LLL + +
Sbjct: 279 AIGVSGVGGAMAVYGALDAVCSMTAGRFTSGLSSITFIVSGGAVAQASVFLWLLLGYRQT 338
Query: 362 SGFIGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQLKIWQSATIAMVFFL 421
SG +GT Y L +AA+LGIGDG+L TQ++ALL +LFKHD EGAFAQLK+WQSA IA+VFFL
Sbjct: 339 SGVLGTAYPLIMAAILGIGDGILNTQISALLALLFKHDTEGAFAQLKVWQSAAIAIVFFL 398
Query: 422 APYISFQAVIMVMLTLLCLSFCSFLWLALKVGN 454
+PYIS QA+++VML ++C+S SFL+LALKV N
Sbjct: 399 SPYISLQAMLIVMLVMVCVSLFSFLFLALKVEN 431
>At3g03620 unknown protein
Length = 466
Score = 32.3 bits (72), Expect = 0.56
Identities = 34/157 (21%), Positives = 65/157 (40%), Gaps = 19/157 (12%)
Query: 303 IGVSGVGIAMAVYGAFDGICSLVAGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMSS 362
+ V G+GI A+ G G ++V + G + A V ++ +L S+SS
Sbjct: 203 VSVMGMGIGGALLGLNVGSWAMVLAEFVYIFGGWCPFTWTGFSIAAFVDLIPMLKLSISS 262
Query: 363 GFIGTLYILFLAALL----------------GIGDGVLMTQLNALLGMLFKHDMEGAFAQ 406
GF+ L +++ L+ I + +LN LG L + A
Sbjct: 263 GFMICLEYWYMSILVLMAGYTKDAKIAISAFSICQYIYTWELNICLGFLGAACVRVAN-- 320
Query: 407 LKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFC 443
++ + A+ F + ++ ++ V+ + LCL+FC
Sbjct: 321 -ELGKGDAHAVRFSIKVILTISTLMGVIFSALCLAFC 356
>At5g64280 2-oxoglutarate/malate translocator
Length = 549
Score = 31.6 bits (70), Expect = 0.96
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 263 SLTGALSDVKMLLIIPLIAYSG-LQHAFVWAEFTKYVVTPEIGVSGVGIAMAVYGAFDGI 321
S+ A+ + LL++ +I + L W T + V IG++G + V
Sbjct: 369 SVVSAMIGLSTLLLLGVINWDDCLSDKSAWDSLTWFAVL--IGMAGQLTNLGVVAWMSDC 426
Query: 322 CSLVAGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIG- 380
+ + L S+T SF +QA L++ L F+ +G G LY FLA + G
Sbjct: 427 VAKLLQSL-----SLTWPASF-IILQACYLLIHYL-FASQTGHAGALYPPFLAMQIAAGV 479
Query: 381 DGVLMTQLNALLGMLFKHDMEGAFAQLKIWQSATIAMVFFLAPYISFQAVIMV 433
GVL A L + F +++ GA A S A +++ A Y+ + + V
Sbjct: 480 PGVL-----AALCLAFNNNLSGALAH----YSGGPAALYYGAGYVDLRDMFRV 523
>At1g55020 unknown protein
Length = 859
Score = 30.8 bits (68), Expect = 1.6
Identities = 16/36 (44%), Positives = 21/36 (57%), Gaps = 2/36 (5%)
Query: 177 DFNGEFWGVYTLHQFIGNLITFALLSDGQEGSTNGT 212
DFN F + LH+F+GN IT L+S S NG+
Sbjct: 37 DFNASF--LDRLHEFLGNKITLRLVSSDVTDSENGS 70
>At2g39060 similar to MtN3 protein
Length = 258
Score = 30.4 bits (67), Expect = 2.1
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 321 ICSLVAGRLT--FGLTS-----ITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLYILFL 373
IC+L + L +G+ I SI +FG F++ L L +L ++ I TL ++ +
Sbjct: 49 ICALASATLLLYYGIMKTHAYLIISINTFGCFIEISYLFLYIL-YAPREAKISTLKLIVI 107
Query: 374 AALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQLKIWQSATIAMVFFLAPYISFQAVI-- 431
+ G+ G+L+ +N L+ + G W A ++ F +P + VI
Sbjct: 108 CNIGGL--GLLILLVNLLVPKQHRVSTVG-------WVCAAYSLAVFASPLSVMRKVIKT 158
Query: 432 -----MVMLTLLCLSFCSFLW 447
M L L L+ + +W
Sbjct: 159 KSVEYMPFLLSLSLTLNAVMW 179
>At5g16550 Unknown protein (MQK4.29)
Length = 249
Score = 30.0 bits (66), Expect = 2.8
Identities = 21/64 (32%), Positives = 33/64 (50%), Gaps = 6/64 (9%)
Query: 310 IAMAVYGAFDGICSLVAGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLY 369
I++AV G F + L + G S+ + V A V AVV +L+ +SG+IG Y
Sbjct: 151 ISLAVAGGFLALFFLCLTGVYIGALSVAAFVISTATVSAVVSVLI------ASGWIGFFY 204
Query: 370 ILFL 373
++L
Sbjct: 205 AVWL 208
>At5g19640 peptide transport protein-like
Length = 609
Score = 29.6 bits (65), Expect = 3.6
Identities = 22/106 (20%), Positives = 47/106 (43%), Gaps = 10/106 (9%)
Query: 343 GAFVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEG 402
G + A++L++ +++ +G +LFL ++G G+ ++ G ++ + G
Sbjct: 61 GGWTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVG 120
Query: 403 AFAQLKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFCSFLWL 448
AF W + FQ + ++ + L LSF S+ +L
Sbjct: 121 AFLSDSYWGRYLTCTI--------FQVIFVIGVGL--LSFVSWFFL 156
>At2g29650 Na+-dependent inorganic phosphate cotransporter like
protein
Length = 512
Score = 29.6 bits (65), Expect = 3.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 325 VAGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVL 384
+AG + ++ FG ++ IL + + +G Y+L + A +G+G+GV
Sbjct: 157 IAGGIWADTVGGKRVLGFGVIWWSIATILTPV-----AAKLGLPYLLVVRAFMGVGEGVA 211
Query: 385 MTQLNALL 392
M +N +L
Sbjct: 212 MPAMNNIL 219
>At5g55950 unknown protein
Length = 398
Score = 29.3 bits (64), Expect = 4.8
Identities = 21/64 (32%), Positives = 28/64 (42%), Gaps = 5/64 (7%)
Query: 326 AGRLTFGLTSITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLM 385
+G L G TS TS V G F V+L+ + F GFI A+ +G +
Sbjct: 285 SGALALGATSATSHVVLGQFKTCVILLGGYVIFGSDPGFIS-----ICGAIAALGGMSVY 339
Query: 386 TQLN 389
T LN
Sbjct: 340 TWLN 343
>At2g43070 unknown protein
Length = 543
Score = 29.3 bits (64), Expect = 4.8
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 20/104 (19%)
Query: 345 FVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAF 404
F+ + LLLL + MSS F+ L I F G + N ++ ++ + A
Sbjct: 259 FIVTASIFLLLLFYFMSSWFVWVLTIFFCI-------GGMQGMHNIIMAVILRKCRHLAR 311
Query: 405 AQLKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFCSFLWL 448
+K+ P + +V+ +++ ++CL+F F ++
Sbjct: 312 KSVKL-------------PLLGTMSVLSLLVNIVCLAFAVFWFI 342
>At5g16740 putative protein
Length = 426
Score = 28.9 bits (63), Expect = 6.2
Identities = 18/63 (28%), Positives = 29/63 (45%), Gaps = 4/63 (6%)
Query: 263 SLTGALSDVKMLLIIPLIAYSGLQHAFVWAEFTKYVVTPEIGVSGVGIAMAVYGAFDGIC 322
SLTG+L V + + +P Y + W TK+ +G +G + V G+F+
Sbjct: 359 SLTGSLVSVTIAVTLPSAFYLKI----CWDGMTKFTRAANLGFVVLGCVLGVLGSFESSK 414
Query: 323 SLV 325
LV
Sbjct: 415 LLV 417
>At1g64820 hypothetical protein
Length = 502
Score = 28.9 bits (63), Expect = 6.2
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 298 VVTPEIGVSGVGIAMAVYGAFDGICSLVAGRLTFGLTSITSIVSFGAFVQAVVLILLLLD 357
+ T V+G + + GA D +C G FG GA+ + +L LL+
Sbjct: 71 IATSLTNVTGFSLIVGFAGALDTLCGQAFGAEQFG--------KIGAYTYSSMLCLLVFC 122
Query: 358 FSMS 361
FS+S
Sbjct: 123 FSIS 126
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.329 0.143 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,937,200
Number of Sequences: 26719
Number of extensions: 415226
Number of successful extensions: 1133
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1124
Number of HSP's gapped (non-prelim): 16
length of query: 460
length of database: 11,318,596
effective HSP length: 103
effective length of query: 357
effective length of database: 8,566,539
effective search space: 3058254423
effective search space used: 3058254423
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC135797.3