BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135505.16 - phase: 1 /pseudo
(323 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04120 glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC) 584 e-167
At1g13440 putative protein 580 e-166
At1g79530 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)... 475 e-134
At1g16300 glyceraldehyde-3-phosphate dehydrogenase like protein 470 e-133
At1g12900 glyceraldehyde 3-phosphate dehydrogenase A, cholorplas... 286 1e-77
At3g26650 glyceraldehyde 3-phosphate dehydrogenase A subunit (GapA) 281 3e-76
At1g42970 putative glyceraldehyde-3-phosphate dehydrogenase (At1... 281 4e-76
At2g07750 putative RNA helicase 31 0.79
At2g03140 similar to late embryogenesis abundant proteins 31 1.0
At1g63250 putative RNA helicase 30 1.8
At3g48240 putative protein 29 3.0
At2g47580 small nuclear ribonucleoprotein U1A 29 3.9
At5g26710 glutamyl-tRNA synthetase 28 8.8
At5g06300 lysine decarboxylase-like protein 28 8.8
At1g21440 hypothetical protein 28 8.8
>At3g04120 glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC)
Length = 338
Score = 584 bits (1505), Expect = e-167
Identities = 289/323 (89%), Positives = 305/323 (93%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELT 60
KI+IGINGFGRIGRLVARV L+RDDVELVAVNDPFITT+YMTYMFKYDSVHGQWK++EL
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELK 64
Query: 61 VKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVI 120
+KD KTLLFGEKPVTVF RNPE+IPWA GAD +VESTGVFTDKDKAAAHLKGGAKKV+
Sbjct: 65 IKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 121 ISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 180
ISAPSKDAPMFVVGVNE EYK + DI+SNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 181 ITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 240
ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDV 244
Query: 241 SVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAG 300
SVVDLTVRLEK ATYD+IK AIKEESEG LKGILGYTEDDVVSTDF+GD RSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 301 IALNDNFVKLVSWYDNELGYSTR 323
IAL+D FVKLVSWYDNE GYS+R
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSR 327
>At1g13440 putative protein
Length = 338
Score = 580 bits (1496), Expect = e-166
Identities = 287/323 (88%), Positives = 303/323 (92%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELT 60
KI+IGINGFGRIGRLVARV L+RDDVELVAVNDPFITT+YMTYMFKYDSVHGQWK+ EL
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELK 64
Query: 61 VKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVI 120
VKD KTLLFGEKPVTVF RNPE+IPW GAD +VESTGVFTDKDKAAAHLKGGAKKV+
Sbjct: 65 VKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 121 ISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 180
ISAPSKDAPMFVVGVNE EYK + DI+SNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 181 ITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 240
ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDV 244
Query: 241 SVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAG 300
SVVDLTVRLEK ATYD+IK AIKEESEG +KGILGYTEDDVVSTDF+GD RSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 301 IALNDNFVKLVSWYDNELGYSTR 323
IAL+D FVKLVSWYDNE GYS+R
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSR 327
>At1g79530 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
precursor like protein
Length = 422
Score = 475 bits (1223), Expect = e-134
Identities = 238/323 (73%), Positives = 266/323 (81%), Gaps = 1/323 (0%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELT 60
K K+GINGFGRIGRLV R+A RDD+E+VAVNDPFI YM YM KYDS HG +K +
Sbjct: 86 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGS-IN 144
Query: 61 VKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVI 120
V D TL K V V + R+P EIPWA GAD +VES+GVFT KAA+HLKGGAKKVI
Sbjct: 145 VIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVI 204
Query: 121 ISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 180
ISAPS DAPMFVVGVNE Y+P DI+SNASCTTNCLAPLAKV+++ FGI+EGLMTTVH+
Sbjct: 205 ISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHA 264
Query: 181 ITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 240
TATQKTVDGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 265 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNV 324
Query: 241 SVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAG 300
SVVDLT RLEK A+Y+ +KAAIK SEG LKGILGYT++DVVS DF+GD+RSSIFDA AG
Sbjct: 325 SVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAG 384
Query: 301 IALNDNFVKLVSWYDNELGYSTR 323
I L+ +FVKLVSWYDNE GYS R
Sbjct: 385 IGLSKSFVKLVSWYDNEWGYSNR 407
>At1g16300 glyceraldehyde-3-phosphate dehydrogenase like protein
Length = 420
Score = 470 bits (1209), Expect = e-133
Identities = 236/323 (73%), Positives = 267/323 (82%), Gaps = 1/323 (0%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELT 60
K K+GINGFGRIGRLV R+A RDD+E+VAVNDPFI YM YMFKYDS HG +K +
Sbjct: 84 KTKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGT-IN 142
Query: 61 VKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVI 120
V D TL K V V + R+P EIPWA GA+ +VES+GVFT +A++HLKGGAKKVI
Sbjct: 143 VIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVI 202
Query: 121 ISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 180
ISAPS DAPMFVVGVNEK Y P DI+SNASCTTNCLAPLAKV+++ FGI+EGLMTTVH+
Sbjct: 203 ISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHA 262
Query: 181 ITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 240
TATQKTVDGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 263 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 322
Query: 241 SVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAG 300
SVVDLT RLEK A+Y+ +KAAIK SEG L+GILGYTE+DVVS DF+GD+RSSIFDA AG
Sbjct: 323 SVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANAG 382
Query: 301 IALNDNFVKLVSWYDNELGYSTR 323
I L+ +F+KLVSWYDNE GYS R
Sbjct: 383 IGLSKSFMKLVSWYDNEWGYSNR 405
>At1g12900 glyceraldehyde 3-phosphate dehydrogenase A, cholorplast
precursor, putative
Length = 399
Score = 286 bits (732), Expect = 1e-77
Identities = 156/326 (47%), Positives = 210/326 (63%), Gaps = 6/326 (1%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKNDE 58
KIK+ INGFGRIGR R R D +++V +ND +++ KYDS G + D
Sbjct: 64 KIKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADV 122
Query: 59 LTVKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKK 118
DS + G K + + + RNP +PW G D+++E TGVF D+D A HL+ GAKK
Sbjct: 123 KPSGDSALSVDG-KIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKK 181
Query: 119 VIISAPSK-DAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTT 177
V+I+AP K D P +VVGVN + Y E IISNASCTTNCLAP KV++ +FGI++G MTT
Sbjct: 182 VLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 241
Query: 178 VHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 237
HS T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 242 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 300
Query: 238 VDVSVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDA 297
+VSVVDL V++ K +++ AA ++ +E LKGIL ++ +VS DF SS D+
Sbjct: 301 PNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDS 360
Query: 298 KAGIALNDNFVKLVSWYDNELGYSTR 323
+ + D+ VK+++WYDNE GYS R
Sbjct: 361 SLTMVMGDDMVKVIAWYDNEWGYSQR 386
>At3g26650 glyceraldehyde 3-phosphate dehydrogenase A subunit (GapA)
Length = 396
Score = 281 bits (719), Expect = 3e-76
Identities = 152/326 (46%), Positives = 211/326 (64%), Gaps = 6/326 (1%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKNDE 58
K+K+ INGFGRIGR R R D ++++A+ND +++ KYDS G + D
Sbjct: 61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADV 119
Query: 59 LTVKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKK 118
++ + G K + V ++RNP +PW G DI++E TGVF D++ A H++ GAKK
Sbjct: 120 KPSGETAISVDG-KIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKK 178
Query: 119 VIISAPSK-DAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTT 177
VII+AP K D P +VVGVN Y + IISNASCTTNCLAP KV++ +FGI++G MTT
Sbjct: 179 VIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTT 238
Query: 178 VHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT 237
HS T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVPT
Sbjct: 239 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPT 297
Query: 238 VDVSVVDLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDA 297
+VSVVDL V++ K +++ AA ++ +E LKGIL ++ +VS DF S+ D+
Sbjct: 298 PNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDS 357
Query: 298 KAGIALNDNFVKLVSWYDNELGYSTR 323
+ + D+ VK+++WYDNE GYS R
Sbjct: 358 SLTMVMGDDMVKVIAWYDNEWGYSQR 383
>At1g42970 putative glyceraldehyde-3-phosphate dehydrogenase
(At1g42970)
Length = 447
Score = 281 bits (718), Expect = 4e-76
Identities = 156/329 (47%), Positives = 219/329 (66%), Gaps = 9/329 (2%)
Query: 1 KIKIGINGFGRIGRLVARVALKRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKNDE 58
K+K+ INGFGRIGR R R D +E+V +ND + +++ KYDS+ G +K E
Sbjct: 81 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKN-ASHLLKYDSMLGTFKA-E 138
Query: 59 LTVKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKK 118
+ + D++T+ K + V ++R+P ++PWA G DI++E TGVF D A H++ GA K
Sbjct: 139 VKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASK 198
Query: 119 VIISAPSK--DAPMFVVGVNEKEYKPEF-DIISNASCTTNCLAPLAKVINDRFGIVEGLM 175
VII+AP+K D P +V+GVNE++Y + +IISNASCTTNCLAP AKV+++ FGIV+G M
Sbjct: 199 VIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVKGTM 258
Query: 176 TTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 235
TT HS T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RV
Sbjct: 259 TTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRV 317
Query: 236 PTVDVSVVDLTVRLEKPA-TYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSI 294
PT +VSVVDL + +EK T + + A ++ + G +KGIL + +VS DF S+
Sbjct: 318 PTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTT 377
Query: 295 FDAKAGIALNDNFVKLVSWYDNELGYSTR 323
D+ + + D+ VK+V+WYDNE GYS R
Sbjct: 378 IDSSLTMVMGDDMVKVVAWYDNEWGYSQR 406
>At2g07750 putative RNA helicase
Length = 845
Score = 31.2 bits (69), Expect = 0.79
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 132 VVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGP 191
V V E++ +P I S +C++PL GIV+ MT V T ++ +DG
Sbjct: 357 VDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVK--MTRVQDATLSE-CLDGK 413
Query: 192 SAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM 231
A ++ + TG K++ +LPA+ L M
Sbjct: 414 DA------------LVKAKTGTGKSMAFLLPAIETVLKAM 441
>At2g03140 similar to late embryogenesis abundant proteins
Length = 1805
Score = 30.8 bits (68), Expect = 1.0
Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 22/141 (15%)
Query: 24 DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSKTLLFGEKPVTVFAHRNPE 83
DD VAVN F + M + G +DE +KD K L + + E
Sbjct: 952 DDSTQVAVNSVFGVLENMISQLDEEKKEGNEVSDEKNLKDEKNLKDAKNVTNEVVSPSEE 1011
Query: 84 EIPWASTGADII-----------VESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFV 132
EIP+ ++ V T +D DK ++ FV
Sbjct: 1012 EIPYKRETKSLMPSAKSRDPACSVSETEKCSDNDKVTG---------VVIEKQLGRDEFV 1062
Query: 133 VGVNEKEYKPE--FDIISNAS 151
+G + + PE D I N+S
Sbjct: 1063 IGKHSPKILPERKTDSIENSS 1083
>At1g63250 putative RNA helicase
Length = 798
Score = 30.0 bits (66), Expect = 1.8
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 132 VVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGP 191
V V E++ +P I S +C++PL GI++ MT V T ++ +DG
Sbjct: 310 VDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILK--MTRVQDATLSE-CLDGK 366
Query: 192 SAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM 231
A ++ + TG K++ +LPA+ L M
Sbjct: 367 DA------------LVKAKTGTGKSMAFLLPAIETVLKAM 394
>At3g48240 putative protein
Length = 180
Score = 29.3 bits (64), Expect = 3.0
Identities = 16/60 (26%), Positives = 29/60 (47%)
Query: 114 GGAKKVIISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKVINDRFGIVEG 173
GG + I+S P + +P G + K F ++++ S C+AP + + RF + G
Sbjct: 101 GGKIRAILSPPKQMSPRSSGGGGDLSPKSPFSVVASPSPPRYCVAPPTENLLSRFRMRTG 160
>At2g47580 small nuclear ribonucleoprotein U1A
Length = 250
Score = 28.9 bits (63), Expect = 3.9
Identities = 13/35 (37%), Positives = 21/35 (59%), Gaps = 1/35 (2%)
Query: 85 IPWASTGADIIVESTGVFTDKDKAAAH-LKGGAKK 118
I +A T +D++ ++ G F ++K H KGG KK
Sbjct: 92 IQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKK 126
>At5g26710 glutamyl-tRNA synthetase
Length = 719
Score = 27.7 bits (60), Expect = 8.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 109 AAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKPEFDI 146
A ++K G+ K + + SKD+ V G + + KPE D+
Sbjct: 169 ATYVKKGSGKPVAAPKSKDSQQAVKGDGQDKGKPEVDL 206
>At5g06300 lysine decarboxylase-like protein
Length = 217
Score = 27.7 bits (60), Expect = 8.8
Identities = 22/77 (28%), Positives = 34/77 (43%), Gaps = 14/77 (18%)
Query: 83 EEIPWASTG----------ADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFV 132
E I WA G D S F DK + A+++I+SAP+ +
Sbjct: 123 EVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQ 182
Query: 133 VGVNEKEYKPEFDIISN 149
+ +EY+PEFD I++
Sbjct: 183 L----EEYEPEFDEITS 195
>At1g21440 hypothetical protein
Length = 317
Score = 27.7 bits (60), Expect = 8.8
Identities = 15/54 (27%), Positives = 25/54 (45%)
Query: 88 ASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYK 141
A T A + TG+ D+A +++ GA + AP D + +G K Y+
Sbjct: 171 ARTDARALSAKTGLSDAIDRANLYMEAGADASFVEAPRDDDELKEIGRRTKGYR 224
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,195,983
Number of Sequences: 26719
Number of extensions: 309181
Number of successful extensions: 768
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 16
length of query: 323
length of database: 11,318,596
effective HSP length: 99
effective length of query: 224
effective length of database: 8,673,415
effective search space: 1942844960
effective search space used: 1942844960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135505.16