BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135315.2 - phase: 0
(478 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03060 putative protein 32 1.0
At4g03780 putative athila-like protein 32 1.0
At1g79830 unknown protein (At1g79830) 32 1.0
At1g32810 hypothetical protein 32 1.0
At5g53020 putative protein 31 1.7
At3g02120 hypothetical protein 31 1.7
At1g65280 30 2.2
At4g13540 unknown protein (At4g13540) 30 2.9
At4g08350 putative protein 30 2.9
At2g24500 putative C2H2-type zinc finger protein 30 2.9
At5g41140 putative protein 30 3.8
At1g49870 hypothetical protein 30 3.8
At5g55520 putative protein 29 5.0
At5g19900 PRLI-interacting factor A 29 5.0
At5g06180 unknown protein 29 5.0
At2g18540 putative vicilin storage protein (globulin-like) 29 5.0
At5g60030 KED - like protein 29 6.5
At3g51730 unknown protein 29 6.5
At3g16000 myosin heavy chain like protein 29 6.5
At1g79840 homeobox protein (GLABRA2) 29 6.5
>At5g03060 putative protein
Length = 292
Score = 31.6 bits (70), Expect = 1.0
Identities = 21/78 (26%), Positives = 38/78 (47%), Gaps = 1/78 (1%)
Query: 393 KKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARG 452
K ++ K Y E +++ +Q N ++K + K +ELEEK L++D ++ R
Sbjct: 38 KHEILKENYENLEKDYKSIEESFKQMNEMNEIMKFQYQKQIKELEEKILSLLKDLEKERS 97
Query: 453 RRNFYARYC-GSDSESES 469
+ Y + G SE E+
Sbjct: 98 EKEEYMKEMKGMISEKEA 115
>At4g03780 putative athila-like protein
Length = 489
Score = 31.6 bits (70), Expect = 1.0
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 42/168 (25%)
Query: 310 PTGQREAFTRAWSKVRRKSVRHLGVRSGIAHEAYTQWVINRAEEIGMPYPAMRHVAASAP 369
P + E FTR W + HL RS + E+ ++ EEI +P
Sbjct: 311 PIKEDEDFTREWFAPEDQKGVHLEERS-LESESLSE------EEISIP----------TY 353
Query: 370 SIPLPLPPTTQEMYQEHLAMES---RKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLK 426
S P PPT +E L ++S + ++W YN E+ I GK K
Sbjct: 354 SPGEPKPPTNPSAEEEQLILDSFAEKLLELWIG-YNAQEDTI----GKSTHK-------- 400
Query: 427 KELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDHPT 474
+EE + ++ + +G NF + SE ED+ T
Sbjct: 401 ---------MEELNSTILELQEMVKGYHNFEIEDWSKEPGSEEEDYST 439
>At1g79830 unknown protein (At1g79830)
Length = 918
Score = 31.6 bits (70), Expect = 1.0
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 367 SAPSIPLPLPPTTQEMYQEHLAMESRKKQMWKAR--YNEAENLIMTLDGKDEQKTHENLM 424
S PS P+ L E Q ++E +++ + R Y A+ TL+G+ Q E
Sbjct: 670 SLPSSPIQLSCLRAEQGQLSKSLEKERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRE 729
Query: 425 LKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDHP 473
L+++ + +E+ +EL+ +D +R + R R +S + SE P
Sbjct: 730 LRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSEQLP 778
>At1g32810 hypothetical protein
Length = 654
Score = 31.6 bits (70), Expect = 1.0
Identities = 15/63 (23%), Positives = 31/63 (48%)
Query: 413 GKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDH 472
GK + + L ++++ +KV R+ ++E+ D + A + + +C + E E E H
Sbjct: 575 GKRKARKRRRLSIQRKGIKVLRKKRNEEEVSEEDEEDAFSDTSEESIFCDEEEEEEEEGH 634
Query: 473 PTT 475
T
Sbjct: 635 TAT 637
>At5g53020 putative protein
Length = 720
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/80 (28%), Positives = 40/80 (49%), Gaps = 3/80 (3%)
Query: 375 LPPTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQ---KTHENLMLKKELVK 431
L T + QEH + R+K+ + + L L ++Q K HE L E+ K
Sbjct: 146 LRETQERDVQEHSSELWRQKKTFLELASSQRQLEAELSRANKQIEAKGHELEDLSLEINK 205
Query: 432 VRRELEEKDELLMRDSKRAR 451
+R++LE+KD +L K+++
Sbjct: 206 MRKDLEQKDRILAVMMKKSK 225
>At3g02120 hypothetical protein
Length = 480
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/89 (23%), Positives = 36/89 (39%), Gaps = 4/89 (4%)
Query: 363 HVAASAPSIPLPLPPTTQEMYQEHLAMESRKKQMWKARY----NEAENLIMTLDGKDEQK 418
HV S+PLP P Y++ E Q+ + NE E + ++ DE +
Sbjct: 269 HVITEINSVPLPPPVKKPNEYEKETIAEKEPYQVENSNSDIEDNEEEEKMSEVESDDEHE 328
Query: 419 THENLMLKKELVKVRRELEEKDELLMRDS 447
+ M++ E + + +E E DS
Sbjct: 329 EEQTDMIEAEALVEKEVIETVKENKPEDS 357
>At1g65280
Length = 605
Score = 30.4 bits (67), Expect = 2.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 426 KKELVKVRRELEEKDELLMRDSKRARGRRNFYAR----YCGSDSESESEDHPTT 475
K+E + R+++E K+ K+ + ++ Y Y GSDS S+ ED P T
Sbjct: 60 KREKERKRKKIERKERKRRDMKKKKKTKKREYESDTESYSGSDSFSDQEDDPET 113
>At4g13540 unknown protein (At4g13540)
Length = 210
Score = 30.0 bits (66), Expect = 2.9
Identities = 15/54 (27%), Positives = 33/54 (60%), Gaps = 1/54 (1%)
Query: 388 AMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDE 441
A E R+++ + +E E +I+ L + + E L++E+ ++R+++EEK+E
Sbjct: 21 ANEQRRRET-RRELDEKERVILALKMAETEWRKERKRLREEVKRLRQKMEEKEE 73
>At4g08350 putative protein
Length = 1054
Score = 30.0 bits (66), Expect = 2.9
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
Query: 428 ELVKVRRELEEKDELLMRD---SKRARGRRNFYARYCGSDSESESED 471
+L + E EE++E R S+R RGR NF Y DS+ E +D
Sbjct: 19 DLEEEEEEDEEEEEERGRGGGGSRRKRGRSNFIDDYAEEDSQEEDDD 65
>At2g24500 putative C2H2-type zinc finger protein
Length = 395
Score = 30.0 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 29/60 (47%), Gaps = 1/60 (1%)
Query: 413 GKDEQKTHE-NLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESED 471
G K HE +L K ++K E+D+ +++ R +N A+ GS E ESED
Sbjct: 76 GYRSSKAHEQHLKSKSHVLKASTSTGEEDKAIIKQLPPRRVEKNNTAQLKGSIEEEESED 135
>At5g41140 putative protein
Length = 983
Score = 29.6 bits (65), Expect = 3.8
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 334 VRSGIAHEAYTQWVINRAEEIGMPYPAMRHVAASAPSIPLPLPPTTQEMYQEHLAMESRK 393
V + + HE + R +EI + + S+ L Q + E A+ +
Sbjct: 725 VNADLTHE-----ITRRKDEIEILRLDLEETRKSSMETEASLSEELQRIIDEKEAVITAL 779
Query: 394 KQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDE 441
K + +NL +L + + + L+K++V+VR ELE+K+E
Sbjct: 780 KSQLETAIAPCDNLKHSLSNNESEIEN----LRKQVVQVRSELEKKEE 823
>At1g49870 hypothetical protein
Length = 828
Score = 29.6 bits (65), Expect = 3.8
Identities = 17/56 (30%), Positives = 32/56 (56%), Gaps = 2/56 (3%)
Query: 385 EHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKD 440
+H+ ++KQM+KA E EN +G Q HE++ + K ++ RR++ +K+
Sbjct: 639 KHVPKLEKEKQMFKAGVEETENSKRNNEGSLNQ-GHESMKVAKPILS-RRQMRDKE 692
>At5g55520 putative protein
Length = 802
Score = 29.3 bits (64), Expect = 5.0
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 389 MESRKKQMWKARYNEAENLIMTLDGKDE----QKTHENLMLKKELVKVRRELEEKDELL 443
++ KK + + L+ + DG+DE ++T+E +E KVR +L EK+ LL
Sbjct: 431 LDEYKKNALQESSKVTQQLMKSDDGEDETEVVKETYETNQRSEEFGKVRIDLSEKEALL 489
>At5g19900 PRLI-interacting factor A
Length = 494
Score = 29.3 bits (64), Expect = 5.0
Identities = 20/70 (28%), Positives = 31/70 (43%)
Query: 402 NEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYC 461
N EN + D Q ENL LK+ L + REL + L +R ++
Sbjct: 306 NVLENRVDDQDSHIAQLEEENLTLKERLFLMERELGDMRRRLQYLERRDMVAQDANEEVV 365
Query: 462 GSDSESESED 471
++SES+ +D
Sbjct: 366 ENESESDGDD 375
>At5g06180 unknown protein
Length = 404
Score = 29.3 bits (64), Expect = 5.0
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 296 NLATSPEFFYYSNAPTGQREA--FTRAWSKVRRKSVRHLGVRSGIAHEAYTQWVINRAEE 353
+L +P+ Y+S P G+R+ F R W R R++ + +G H A + N E
Sbjct: 164 DLVITPQHDYFSLTPEGKRQIPFFLRPWVTPREHPGRNVFLTTGALHYADASTLRNATSE 223
>At2g18540 putative vicilin storage protein (globulin-like)
Length = 699
Score = 29.3 bits (64), Expect = 5.0
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 380 QEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEK 439
Q +E + + R++Q K R EA ++E+K E + ++E + R+E EE
Sbjct: 530 QRKEREEVERKRREEQERKRREEEARKR------EEERKREEEMAKRREQERQRKEREEV 583
Query: 440 DELLMRDSKRAR 451
+ + + +R R
Sbjct: 584 ERKIREEQERKR 595
>At5g60030 KED - like protein
Length = 292
Score = 28.9 bits (63), Expect = 6.5
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 380 QEMYQEHLAMESRKKQMWKARYNEAENLIMTLDG-KDEQKTHENLMLKKELVKVRRELEE 438
+++ E + + ++++ K++ N E+++ + +DEQK+ E KK K ++E
Sbjct: 171 EKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKN--KDEDVVDE 228
Query: 439 KDELLMRDSKRARGRRNFYARYCGSDSESESED 471
K++ + D +R+ R+ + SD E SE+
Sbjct: 229 KEKEKLEDEQRSGERKKEKKKKRKSDEEIVSEE 261
>At3g51730 unknown protein
Length = 213
Score = 28.9 bits (63), Expect = 6.5
Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 17/76 (22%)
Query: 153 LLIYGLILFPNLDNFVDMNAIEIFHSRNPVPTLL-----------------ANMYHAIHD 195
LL+ GLIL + +FVD E ++ V TL A + +HD
Sbjct: 10 LLLLGLILVSDARSFVDSTISEKVSNKEDVCTLCEEYVTDALSYLEKNVTQAEIIEDLHD 69
Query: 196 RTLKGRGYILCCVPLL 211
R + RGY C+ L+
Sbjct: 70 RCSQLRGYSQQCISLV 85
>At3g16000 myosin heavy chain like protein
Length = 727
Score = 28.9 bits (63), Expect = 6.5
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 380 QEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTHE-------NLMLKKELVKV 432
+E Y+ +L E +K ++ + ++L + + E THE N L+KELV++
Sbjct: 490 KERYERNLDAEKQKNEISASELALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEI 549
Query: 433 -------RRELEEKDELLMRDSKRARG 452
+ELEE+ + ++ +K +G
Sbjct: 550 YKKVETSNKELEEEKKTVLSLNKEVKG 576
>At1g79840 homeobox protein (GLABRA2)
Length = 747
Score = 28.9 bits (63), Expect = 6.5
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 361 MRHVAASAPSIPLPLPPTTQEMYQEHLAMESRKKQMWKARYNEAENLIMTLDGKDEQKTH 420
+RH+ A P P Q++ ++ L + R+ + W + I + Q+ H
Sbjct: 113 IRHMEALFKETPHPDEKQRQQLSKQ-LGLAPRQVKFW---FQNRRTQIKAI-----QERH 163
Query: 421 ENLMLKKELVKVRRE 435
EN +LK EL K+R E
Sbjct: 164 ENSLLKAELEKLREE 178
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,188,645
Number of Sequences: 26719
Number of extensions: 506802
Number of successful extensions: 1453
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1436
Number of HSP's gapped (non-prelim): 32
length of query: 478
length of database: 11,318,596
effective HSP length: 103
effective length of query: 375
effective length of database: 8,566,539
effective search space: 3212452125
effective search space used: 3212452125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC135315.2