BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135231.7 + phase: 0 /pseudo
         (943 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g36850 putative glucan synthase                                     31  2.9
At5g61930 unknown protein                                              30  8.3

>At2g36850 putative glucan synthase
          Length = 784

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 22/137 (16%)

Query: 785 RGSLPWP-----EDTNVTSMRPSLLTSTVQVLVFVFAMQKV-RLFWLRL*HTLVLFRWKW 838
           +G L W      E  ++ ++R  +L + + +  F+F    V +L   R   +L L+ + W
Sbjct: 595 KGELSWESWWEEEQAHIQTLRGRILETILSLRFFMFQYGIVYKLDLTRKNTSLALYGYSW 654

Query: 839 VKL*GCTLLCNG*VICNLTMWISKQTLS*QLKPSFLLETTCPNLDALFPHVVLCSVLSFL 898
           V L     L  G  + ++T                L+       D   P +  C VL F+
Sbjct: 655 VVLVVIVFLFKG--VASITFIA-------------LIVVAIAMTDLSIPDMFAC-VLGFI 698

Query: 899 TLGWSLLGDKPTWLLML 915
             GW+LL    TW  +L
Sbjct: 699 PTGWALLSLAITWKQVL 715


>At5g61930 unknown protein
          Length = 402

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 8/44 (18%)

Query: 742 VPRLSSVLETCLQTGNWLMLRMFLYLDRIINQQRPPPLNNIESR 785
           VP++S+VLE C+Q G        + L++  +++R  P+ +IE R
Sbjct: 194 VPKISAVLELCIQAG--------VDLEKFPSKRRSKPVYSIEGR 229


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.365    0.165    0.642 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,921,814
Number of Sequences: 26719
Number of extensions: 663577
Number of successful extensions: 3112
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3112
Number of HSP's gapped (non-prelim): 2
length of query: 943
length of database: 11,318,596
effective HSP length: 109
effective length of query: 834
effective length of database: 8,406,225
effective search space: 7010791650
effective search space used: 7010791650
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 65 (29.6 bits)