BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134824.6 - phase: 0
(2242 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20390 hypothetical protein 763 0.0
At3g31530 hypothetical protein 459 e-129
At2g15410 putative retroelement pol polyprotein 401 e-111
At2g13330 F14O4.9 382 e-105
At2g14400 putative retroelement pol polyprotein 324 3e-88
At2g15100 putative retroelement pol polyprotein 306 1e-82
At2g14380 putative retroelement pol polyprotein 293 8e-79
At1g37200 hypothetical protein 287 4e-77
At4g03800 274 5e-73
At1g37060 Athila retroelment ORF 1, putative 267 6e-71
At2g10780 pseudogene 266 1e-70
At4g10580 putative reverse-transcriptase -like protein 263 1e-69
At2g04670 putative retroelement pol polyprotein 258 2e-68
At3g11970 hypothetical protein 251 4e-66
At1g36590 hypothetical protein 251 4e-66
At2g07660 putative retroelement pol polyprotein 250 6e-66
At2g14650 putative retroelement pol polyprotein 249 1e-65
At1g35370 hypothetical protein 240 6e-63
At2g14040 putative retroelement pol polyprotein 234 3e-61
At2g06320 putative retroelement pol polyprotein 207 7e-53
>At1g20390 hypothetical protein
Length = 1791
Score = 763 bits (1971), Expect = 0.0
Identities = 432/1117 (38%), Positives = 633/1117 (55%), Gaps = 49/1117 (4%)
Query: 1136 ELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1195
E++NI + R + +GA + ++ ++I LL+ FAWS EDM G+DP I H +
Sbjct: 712 EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 771
Query: 1196 KPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1255
P PV+QK R+ P+ A + EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 772 DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 831
Query: 1256 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1315
VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M +D+EKTSF+T
Sbjct: 832 VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 891
Query: 1316 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKM 1375
GT+CYKVM FGL NAGATYQR + + D I + VEVY+DDM+VKS E HVE+L+K
Sbjct: 892 RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 951
Query: 1376 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGF 1435
F+ L Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+ ++V+
Sbjct: 952 FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1011
Query: 1436 LGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEG 1495
GR+ ++RFIS T C P + LL++ W+ + +EAF+ +K+YL PPILV P G
Sbjct: 1012 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1071
Query: 1496 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1555
L +Y+AV D ++ VL ++D ++ I+Y SK + ETRY ++EK A+ +A+
Sbjct: 1072 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1129
Query: 1556 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1615
+LR Y +HT +++ P++ + +G++ +W + LSEYDI F+ + A+K +LAD
Sbjct: 1130 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1188
Query: 1616 HLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGI 1675
L PL + EE W L DG+ +A G GI
Sbjct: 1189 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1225
Query: 1676 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1735
G +VSP + + R+ F TNN+AEYE I G+ A M+I + + DS L+ Q+
Sbjct: 1226 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1285
Query: 1736 KGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV- 1794
GE+E + K+ Y + + F +L IPR +N ADALA L+ + +D+
Sbjct: 1286 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLR 1341
Query: 1795 PLIKVQRLERPS-----HVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQD 1849
+I V+ +++PS V + + + D W +I+ +L P D
Sbjct: 1342 RIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYLSDGTLP-----SD 1396
Query: 1850 KKTLRRL---AGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTM 1906
K T RRL A ++ L + L K + +L C+ E ++M + H+G G H+ G +
Sbjct: 1397 KWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRAL 1456
Query: 1907 SRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIG 1966
+ KL + G+YW M DC + KC +CQ +A IH P L +P+PF W +D++G
Sbjct: 1457 ALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVG 1516
Query: 1967 RIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNG 2026
+ AS RFILV DYFTKWVEA SY + V F+ IICR+G+P +IITDNG
Sbjct: 1517 PM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNG 1574
Query: 2027 TNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTYKD-WHEMLP 2085
+ + + C +KI + S+P PQ NG EA NK I ++K + K W + L
Sbjct: 1575 SQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELD 1634
Query: 2086 YALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLN 2145
L YRTT RS+T TPF+ YGMEA+ P EV SLR M K E + D+L+
Sbjct: 1635 GVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLD 1693
Query: 2146 LIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPD-PRGKWTPNYE 2204
+EE R A+ R Q+YQ +++KVH R F VG+LVL+ + GK N+E
Sbjct: 1694 DLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWE 1753
Query: 2205 GPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2241
G Y V K G L M G +P N+ +K+Y+
Sbjct: 1754 GSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1790
Score = 73.2 bits (178), Expect = 2e-12
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 810 FSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 869
F++ +L HN L + + ++ VL+DTGSS++++ K L ++ ++
Sbjct: 555 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 614
Query: 870 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 929
+ + FDG +G I LPI +G V F V+ A Y+ +LG PWIH A+ ST
Sbjct: 615 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 674
Query: 930 LHQKLKFVKNGKLVTIHG-------EEAYLVSQLSSFSCIEAGSAEGTAFQGLTIE 978
HQ +KF + + T+ +Y S+L + ++ T G+ E
Sbjct: 675 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAE 730
Score = 44.3 bits (103), Expect = 8e-04
Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 4/172 (2%)
Query: 179 EFDKYNGLTCPQNHIVKY---VRKMGNYKDN-DSLMIHYFQDSLMEDAAEWYTSLSKDDV 234
+ + YNG P+ + + + + DN D+ F + L A W++ L + +
Sbjct: 173 KLESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSI 232
Query: 235 HTFDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 294
+F +L ++F HY + + L S+SQ +ES R + R++ IT +
Sbjct: 233 DSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAI 292
Query: 295 MTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 346
+ + + + + AP+ + + +R E + +I+ K S+
Sbjct: 293 VALRNAVWYDSRFRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 344
>At3g31530 hypothetical protein
Length = 831
Score = 459 bits (1182), Expect = e-129
Identities = 286/868 (32%), Positives = 446/868 (50%), Gaps = 126/868 (14%)
Query: 1289 SFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIH 1348
S+ ++ + + M+PED+EKT+F T G FCY+VMPFGL NAGATY+R + +F I
Sbjct: 83 SYCHSWTLFVVMMMNPEDQEKTAFYTEQGIFCYRVMPFGLKNAGATYERFVNKIFALQIG 142
Query: 1349 KEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQK 1408
K +EVY+DDM+VKS E+ H+ +L + F++L Y ++LNP KC FGVRS
Sbjct: 143 KTMEVYIDDMLVKSMTEKDHISHLRECFKQLNLYNVKLNPAKCRFGVRS----------- 191
Query: 1409 GIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVW 1468
GIE +P ++ A+ M +PQ +++V+ GR+ ++RFIS T C + +LR+N+ W
Sbjct: 192 GIEANPKQIEALLGMASPQNKREVQCLTGRVAALNRFISRSTEKCLAFYDVLRRNKKFEW 251
Query: 1469 NDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYY 1528
C+EAF +K YL PPIL PV G P +Y+AV D ++ L ++D +K I+Y
Sbjct: 252 TTRCEEAFQELKKYLATPPILAKPVIGEPQYLYVAVSDTAVSGELVREDRGEQK--LIFY 309
Query: 1529 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1588
+S+ FT E+RY +EK A+ +A++LR Y +H+ ++ M P++ I + +G++
Sbjct: 310 VSQTFTSAESRYPQMEKLALAVVMSAQKLRPYFQSHSIIVMGSM-PLRVILHSPSQSGRL 368
Query: 1589 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEP 1648
A+W + LSEYDI ++ + K +LAD + P + + + P
Sbjct: 369 AKWTIELSEYDIEYQNKTCAKSQVLADFIVELPTKEAR-------------------ENP 409
Query: 1649 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1708
L ++ W L DG+ + G G+G + SP G E TNN+AEYEA +
Sbjct: 410 L-------DTTWLLHVDGSSSKQGSGVGIRLTSPTG-----------EATNNVAEYEALV 451
Query: 1709 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHI 1768
G+ A ++I + DS L+ NQ GE+ T K+ Y + + L F + EL I
Sbjct: 452 AGLNLAWGLKIGKTRAFCDSQLIANQFNGEYTTQDKKMEAYLIHVQNLAKNFDEFELTRI 511
Query: 1769 PRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPS-------HVFAIGDVIDQAGEN 1821
PR EN ADALA L+S + +P V+ +E+PS HV I DQ +
Sbjct: 512 PRGENTSADALAALASTSDTSLKRVIP---VEFIEKPSIELGKEEHVLPIQISADQDDPD 568
Query: 1822 VVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVD 1881
+ W I ++ + P + K + L+ A RF+L LYK L+ CV+
Sbjct: 569 DCN-SEWMEPIISYISEGKLP--SDKWKARKLKAQAARFVLVDTKLYKWRLSGPLMTCVE 625
Query: 1882 EHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKI 1941
++M ++H G+ +A I
Sbjct: 626 AEAICKIMKEIHSGS----------------------------------------HAPTI 645
Query: 1942 HVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQ 2001
H P L+ ++SP+PF W +D+IG + P S + +LV DYF+KW+EA SY ++
Sbjct: 646 HQPAELLSSIASPYPFMRWSMDIIGPMHP--SKQKKLVLVLTDYFSKWIEAESYASIKDA 703
Query: 2002 VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEA 2061
V F+ +I+CR+G+P +I+TDNG+ + Q C+++ I S+P PQ NG EA
Sbjct: 704 QVENFVLKHILCRHGIPYEIVTDNGSQFISTRFQGFCDKWGIRLSKSTPRYPQGNGQAEA 763
Query: 2062 ANKNIKRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIP 2121
AN+ L L +RTT R +T TPF+ +YG E V+P E+ +P
Sbjct: 764 ANE-------------------LEGVLWLHRTTPRRATRETPFASIYGTECVIPAEMIVP 804
Query: 2122 SLRVIMEAKLSEAEWCQNRYDQLNLIEE 2149
SLR + + ++ + Q D+L+LI+E
Sbjct: 805 SLRRSLSPE-NDPDNTQTPLDELDLIDE 831
Score = 41.2 bits (95), Expect = 0.007
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 884 LGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF 936
LG I LP+ +V F + D Y+ ++G PW++ AV ST H LKF
Sbjct: 3 LGTIKLPVRAKGVTKIVDFSITDQPTVYNAIIGTPWLNQFRAVASTYHLCLKF 55
>At2g15410 putative retroelement pol polyprotein
Length = 1787
Score = 401 bits (1031), Expect = e-111
Identities = 201/497 (40%), Positives = 310/497 (61%), Gaps = 24/497 (4%)
Query: 1113 IPYEITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPD 1172
I Y + + Q+++ P + + +NI + R + I L ++ +++ LR+
Sbjct: 695 IIYNVILVPTQDERP-NPQKGTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAA 753
Query: 1173 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1232
FAWS EDMPG+D + H + P P++QK R+ PD + EV+K +DAG ++
Sbjct: 754 TFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVE 813
Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
V YP+W+ N V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV+ TA +++ SFMD
Sbjct: 814 VRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMD 873
Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
FSGYNQI M DREKT FIT GT+CYKVMPFGL NAGATY R + +F D + +E
Sbjct: 874 AFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSME 933
Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
VY+DDM+VKS E+H+ +L + F+ L +Y ++LNP+KCTFGV SG+ LG++V+++GIE
Sbjct: 934 VYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRGIEA 993
Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
+P ++ AI ++P+P+ ++V+ +GR+ ++RFIS T C P ++LLR N+ W+++C
Sbjct: 994 NPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKRFEWDEKC 1053
Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1532
+ EG L +Y+AV ++ VL ++D ++H I+Y+SK
Sbjct: 1054 E--------------------EGETLYLYIAVSTSAVSGVLVREDR--GEQHPIFYVSKT 1091
Query: 1533 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1592
E RY LEK A+ +A++LR Y ++T +++ P++ I + +G++A+W
Sbjct: 1092 LDGAELRYPTLEKLAFAVVISARKLRPYFKSYTVEVLTN-QPLRTILHSPSQSGRLAKWA 1150
Query: 1593 MLLSEYDIVFKTQKAIK 1609
+ LSEYDI +K + K
Sbjct: 1151 VELSEYDIAYKNRTCAK 1167
Score = 314 bits (804), Expect = 4e-85
Identities = 204/608 (33%), Positives = 296/608 (48%), Gaps = 72/608 (11%)
Query: 1695 FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYAR 1754
F +NN AEYEA I G+ A + +K + Y DS LV +Q G +E + ++ Y R
Sbjct: 1190 FPASNNEAEYEALIAGLRLAHGIEVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVR 1249
Query: 1755 RLLTYFTKVELHHIPRDENQMADALATLSSMFRVN-------HWNDVPLIKVQ-RLERPS 1806
L F EL IPR +N ADALA L+S + DVP IK+Q + +PS
Sbjct: 1250 ELSYNFEVFELTKIPRSDNAPADALAVLASTSDPDLRRVIPVECIDVPSIKIQGTITKPS 1309
Query: 1807 HVFAIGDVIDQAGENVVDYRP--------------------------------------- 1827
I +Q +V P
Sbjct: 1310 EYTVIDLTAEQLSIVMVILPPATDRSEDAGPSGNLVCSSDPGQSSGCDRSDDSNRSADSD 1369
Query: 1828 ------WYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLR 1878
W +I+ ++ R P +DK RRL R + L + L + + VLL
Sbjct: 1370 SPASTNWIEEIRSYIADRIVP-----KDKWAARRLRARSAQYTLPHEHLLRWSATGVLLS 1424
Query: 1879 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 1938
C+D+ EA+Q+M ++H+G G H+ G ++ K+ + G YW M DC ++ +C KCQ +A
Sbjct: 1425 CLDDEEAQQVMREIHEGAGGNHSGGRALALKIRKHGQYWPTMNADCEKFVARCEKCQGHA 1484
Query: 1939 NKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 1998
IH+P L P+PF W +D+I AS ++ILV DYFTKW EA SY +
Sbjct: 1485 PFIHIPSEVLQTAMPPYPFMRWAMDIIRPF--PASRQKKYILVMTDYFTKWFEAESYARI 1542
Query: 1999 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 2058
+ V F+ NIIC +G+P +I+TDNGT + + C ++KI S+P PQ NG
Sbjct: 1543 QSKEVQNFVWKNIICHHGLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQ 1602
Query: 2059 VEAANKNIKRIIQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2117
EA NK I ++K + K W + L L YRTT R ST TPFSL YGMEA+ P E
Sbjct: 1603 AEATNKTILDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCE 1662
Query: 2118 VEIPSLR---VIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVH 2174
+P++R +I + L++ Q D L+ +EE+R A+ R Q+YQ ++KKV
Sbjct: 1663 AGLPTVRRSMLINDPTLND----QMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVK 1718
Query: 2175 PREFKVGELVLKGRISQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVN 2233
R F G+LVL+ + GK ++EGPY++ K G L MDG +P N
Sbjct: 1719 NRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWN 1778
Query: 2234 ADIVKKYF 2241
+ +K+Y+
Sbjct: 1779 SANLKRYY 1786
Score = 34.3 bits (77), Expect = 0.85
Identities = 23/102 (22%), Positives = 43/102 (41%), Gaps = 4/102 (3%)
Query: 183 YNGLTCPQNHIVKYVRKMGNY----KDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVHTFD 238
Y GL P+ + +G +D D+ F L A W++ L + + +
Sbjct: 258 YEGLVDPRPFLTSVSIAIGRAHFSDEDRDAGSCQLFVKHLSGAALTWFSRLEANSIDSVH 317
Query: 239 ELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWR 280
L T+F +YG + L +++Q +ES R + R++
Sbjct: 318 ALTTSFLKNYGVFMEKGASNVDLWTMAQTAKESLRSFIGRFK 359
>At2g13330 F14O4.9
Length = 889
Score = 382 bits (981), Expect = e-105
Identities = 206/538 (38%), Positives = 304/538 (56%), Gaps = 59/538 (10%)
Query: 1247 KKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPED 1306
+K+GK R+C+DFRDLNKA PKD+FPLPHID LV+ T + + SFMD F GYNQI M +
Sbjct: 289 EKNGKWRVCIDFRDLNKACPKDSFPLPHIDRLVEATVEHEKLSFMDAFYGYNQILMRRDG 348
Query: 1307 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEE 1366
+EKT+FIT GT+ YKVMPFGL NAG TYQR + +F D + K +EVY+DDM+VKSA E+
Sbjct: 349 QEKTAFITDRGTYYYKVMPFGLKNAGTTYQRLVNRMFVDQLGKTIEVYIDDMLVKSAHEK 408
Query: 1367 QHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAP 1426
HV L + F+ L K++++LNP KC+F V+S + L ++V+++GIE +P ++ A EMP+P
Sbjct: 409 DHVPQLRECFKILIKFEMKLNPEKCSFEVQSREFLEYLVTERGIEANPKQIAAFIEMPSP 468
Query: 1427 QTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEP 1486
+ ++V+ GR+ ++ FIS C P ++ LRK + WN +C++AF +K YL EP
Sbjct: 469 KMAREVQRLTGRIPALNGFISRSANKCVPFYQPLRKGKEFDWNKDCEQAFKQLKAYLTEP 528
Query: 1487 PILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKT 1546
PIL P +G PL +Y T+ + R +EK
Sbjct: 529 PILAKPEKGEPLYLY--------------------------------TNRDKRCPAMEKL 556
Query: 1547 CCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQK 1606
+ + ++LR Y +H ++ PI+ I +G++A+W + L EYDI ++T+
Sbjct: 557 ALTVVMSVRKLRLYFQSHPI-VVMTSQPIRTILHSLTQSGRLAKWAIELREYDIEYRTRT 615
Query: 1607 AIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDG 1666
++K +LAD + PL D +G + N KW L DG
Sbjct: 616 SLKAQVLADFVIKLPLADL--------------------------DGTNSNKKWLLHVDG 649
Query: 1667 AVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYG 1726
+ N G G+G + SP G I + ++ F +NN +EYEA I GI+ A + I+ + Y
Sbjct: 650 SSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASNNESEYEALIAGIKLAQEKGIREIHAYS 709
Query: 1727 DSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSS 1784
DS LV +Q GE+E ++ Y + + L F +L IPR EN AD LA L+S
Sbjct: 710 DSQLVTSQFHGEYEAKDERMEAYLELVKTLAQQFESFKLTRIPRGENTSADTLAALAS 767
Score = 74.7 bits (182), Expect = 6e-13
Identities = 48/156 (30%), Positives = 77/156 (48%), Gaps = 6/156 (3%)
Query: 806 NNLWFSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTP 865
+ + F E E+ + K H+ AL I ++ + +S ++VDTGSS++V+ + + +
Sbjct: 45 DGITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSK 104
Query: 866 LRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGA 925
L+ + F G +G I LP L F V+D A ++ +LGRPW+H A
Sbjct: 105 LQGRKTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKA 164
Query: 926 VTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSC 961
V ST HQ +KF + ++G SQ SS C
Sbjct: 165 VPSTYHQCIKFPSYKGIAVVYG------SQRSSRKC 194
Score = 33.1 bits (74), Expect = 1.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 1135 IELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGL 1184
I + I + KR + IG L+ V++ +I L+E D FAWS ++ G+
Sbjct: 237 ITQVCIDESDPKRCVGIGHDLDLTVREDLITFLKENKDSFAWSSANLQGI 286
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 324 bits (831), Expect = 3e-88
Identities = 158/355 (44%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 1207 RRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASP 1266
R+ + A + +EV K + G + V+YP+W+AN V V KK+GK R+C+DF DLNKA P
Sbjct: 470 RKLGVERAKAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACP 529
Query: 1267 KDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPF 1326
KD+FPLPHID LV++TA +++ SFMD FSGYNQI M+PED+EKT FIT G +CYKVMPF
Sbjct: 530 KDSFPLPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPF 589
Query: 1327 GLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRL 1386
GL NAGATY R + +F + + K +EVY+DDM++KS +E HV++L + F L +Y+++L
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649
Query: 1387 NPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFI 1446
NP KCTFGV SG+ LG+IV+++GIE +P+++ A MP+P+ K+V+ GR+ ++RFI
Sbjct: 650 NPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFI 709
Query: 1447 SHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFD 1506
S T P +++L+ N+ +W+++C+EAF +K YL PP+L P L +Y++V +
Sbjct: 710 SRSTDKSLPFYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVSN 769
Query: 1507 ESMGCVLGQQDETGKKEHAIYYLSKKFT-DCETRYTMLEKTCCALAWAAKRLRHY 1560
++ VL ++D G+++ Y + +F D E + + +E + AK R +
Sbjct: 770 HAVSGVLIREDR-GEQKPIYYIIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKF 823
Score = 218 bits (556), Expect = 2e-56
Identities = 162/539 (30%), Positives = 255/539 (47%), Gaps = 82/539 (15%)
Query: 1730 LVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMF--R 1787
+++NQ G++E +++ Y + L F K EL IPR +N ADALA L+S
Sbjct: 790 IIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKFELIRIPRGQNTTADALAALASTSDPE 849
Query: 1788 VNHWNDVPLIKVQRLERPSHVFAIGDVIDQA---GENVVDYRPWYYDIKQFLLSREYPPS 1844
VN V I + ++ F + A G+ V+ P +K+ P
Sbjct: 850 VNSIIPVECISERSIKEEKEAFVVTRSRAAARDRGDTAVELPP----VKRRKSKEATVPK 905
Query: 1845 ASKQDKKTLRRLAGRFL-----------LDGDIL--------------YKRNYDMVLLRC 1879
+ Q+ + + +D DIL Y+R L
Sbjct: 906 PAVQENIGIELIEEVISDAKIEAETEPWVDEDILAPNEHPEPEALNSLYRRGVSDPYLLS 965
Query: 1880 VDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYAN 1939
+ E +M +VH+G G+H++G M+ K+ + YYW M DC +YA++C +CQ++A
Sbjct: 966 IFGPVVEIVMSEVHEGLCGSHSSGRAMAFKIKKMCYYWPTMITDCVKYAQRCKRCQLHAP 1025
Query: 1940 KIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 1999
IH P + +S+P+PF W +D+IG + +++ G +++LV DYF+KW+EA +
Sbjct: 1026 LIHQPSELFSSISAPYPFMRWSMDIIGPLH-RSTRGVQYLLVLTDYFSKWIEAEA----- 1079
Query: 2000 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 2059
I+ +G+ K+ + S+ PQ NG
Sbjct: 1080 -----------ILLNWGI------------------------KVSY--STLRYPQGNGQA 1102
Query: 2060 EAANKNIKRIIQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 2118
EAANK I ++K + K W++ L L YRTT R STG TPFSLVYGM+AV+P E+
Sbjct: 1103 EAANKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTGETPFSLVYGMKAVVPAEL 1162
Query: 2119 EIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 2178
+P LR EA L+E E D L+ I E+R A+ + Q+YQ ++ KV R F
Sbjct: 1163 NVPGLR-RTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAARYYNSKVKSRPF 1221
Query: 2179 KVGELVLKGRI--SQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 2235
VG+ VLK R+ +++ + GK N+EGPY+V + G L ++ + P N +
Sbjct: 1222 FVGDYVLK-RVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLEDRPVQRPWNVN 1279
Score = 45.1 bits (105), Expect = 5e-04
Identities = 26/111 (23%), Positives = 49/111 (43%), Gaps = 4/111 (3%)
Query: 181 DKYNGLTCPQNHIVKYVRKMG----NYKDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVHT 236
+ YNGL P+ ++ ++ G N D D F ++L A W+T L +
Sbjct: 163 ESYNGLEDPKGYLAAFLIAAGRVDLNEADEDVRYCKLFSENLCGQALMWFTQLEPGSISN 222
Query: 237 FDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARIT 287
F+EL+ F Y + L +LSQ E+ R + +++ ++++
Sbjct: 223 FNELSVVFLKQYSILMDKSISDTDLWNLSQGPNETLRAFITKFKYVLSKLS 273
Score = 37.7 bits (86), Expect = 0.077
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 807 NLWFSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPL 866
++ F E+E + H+ AL ++++ + +S +L+DTGSS++++ +TL+++ +
Sbjct: 408 SILFDEKETQHLERSHDDALVVTLDVANFEVSRILIDTGSSVDLIFLSTLERMGISRADV 467
Query: 867 RRSTFLVKAFDGSRKNVLGEIDLPITIG 894
R V+ K V E+D + IG
Sbjct: 468 NRRKLGVE----RAKAVNDEVDKLLKIG 491
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 306 bits (783), Expect = 1e-82
Identities = 223/784 (28%), Positives = 379/784 (47%), Gaps = 94/784 (11%)
Query: 1467 VWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAI 1526
+WN+ C+EAF +K YL EP +L G L +Y+AV + ++ V + + + K+ I
Sbjct: 630 IWNESCEEAFKQLKRYLSEPSVLAKREFGEQLFLYIAVSESAVTGVQVRVERSDKR--PI 687
Query: 1527 YYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTG 1586
+Y+ +TRY M+EK A+ AA++LR Y +H +++ + P++ I +G
Sbjct: 688 FYV-------KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSL-PLRTILHSPTQSG 739
Query: 1587 KIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCD 1646
++ +W + LSE+D+ F+ + ++ ++ ++ F +++S++
Sbjct: 740 RLGKWAIELSEFDLEFRARTSLNSTMDTSR------------QWGFIK---TWVRSRN-- 782
Query: 1647 EPLINEGPDPNSKWG--LVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEY 1704
+++ P N G D + AY + V G F + N+ A
Sbjct: 783 ---LSDAPTANRYSGEYEAKDACMEAYLNLVREV----SGRFEQFELTRIPRAENSAANA 835
Query: 1705 EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVE 1764
A + E R+ ++ ++ +++I + R RRL +
Sbjct: 836 LAALASTFEVTLPRVIPVETISQPSIRLDEI---------SFVTTRAMRRRLDAQSAENG 886
Query: 1765 LHHIPRDENQMADAL----ATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGE 1820
LH + DE +++DA+ + NH +P ++P H +
Sbjct: 887 LHQLGDDE-EISDAVHPTEIVENQSLPDNHNAPLP-------DQPPHDWG---------- 928
Query: 1821 NVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCV 1880
D+R I+ ++L+ P A K + L+ RF + DILY+R + C+
Sbjct: 929 --ADWRE---PIRDYILNGTLP--AEKWAARKLKATCARFCIANDILYRRIFSAPDAVCI 981
Query: 1881 DEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANK 1940
+ +M +VHDGT G H G +++ K+ + GYYW + DC YARKC +CQ +A
Sbjct: 982 FGEQTRTVMKEVHDGTCGNHTGGRSLAFKVRKYGYYWPTLVADCEAYARKCEQCQKHAPL 1041
Query: 1941 IHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTK 2000
I P L +S+P+PF W +D++G + T+ VEAA+Y+N+T
Sbjct: 1042 ILQPAELLTTVSAPYPFMKWLMDIVGPLHVS---------------TRGVEAAAYSNITH 1086
Query: 2001 QVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVE 2060
V FI +IICR+G+P +I+TDNG+ + + CEE++I +S+P PQ NG E
Sbjct: 1087 VQVWNFIWKDIICRHGLPYEIVTDNGSQFISEQFEVFCEEWQIRLSHSTPRYPQGNGQAE 1146
Query: 2061 AANKNIKRIIQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVE 2119
A NK I ++K + YK W L L RTT R +T TPFSL+YGMEAV+P E++
Sbjct: 1147 AMNKTIISNLKKKLNAYKGAWFGELQNVLWAVRTTPRRATDETPFSLIYGMEAVIPAEIK 1206
Query: 2120 IPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFK 2179
+PS R I + +E E + D ++ I+E+R A+AR Q+Y ++ V R F+
Sbjct: 1207 VPSARRIRNPQ-NETENNEMIIDVIDTIDERRNRALARMQNYHNAGARYYNSNVRNRSFE 1265
Query: 2180 VGELVLKGRISQQPDPR--GKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2237
VG LVL+ R+ Q + GK ++EGPY + G L +M+G + N+ +
Sbjct: 1266 VGTLVLR-RVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHL 1324
Query: 2238 KKYF 2241
K+++
Sbjct: 1325 KRFY 1328
Score = 172 bits (435), Expect = 3e-42
Identities = 84/151 (55%), Positives = 106/151 (69%)
Query: 1181 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1240
M G+ ++ H + P PV+QK R+ PD A + EV + ++ G + V+YPEW+A
Sbjct: 412 MTGISTEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPEWLA 471
Query: 1241 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1300
N V V KK+GK R+CVDF DLNKA KD FPLPHID LV++T ++ SFMD FSGYNQI
Sbjct: 472 NPVVVKKKNGKWRVCVDFTDLNKACSKDFFPLPHIDRLVESTTGHEMLSFMDAFSGYNQI 531
Query: 1301 KMSPEDREKTSFITPWGTFCYKVMPFGLINA 1331
M+PED+EKTSFIT GT+ YKVMPFGL NA
Sbjct: 532 LMNPEDQEKTSFITECGTYYYKVMPFGLKNA 562
Score = 47.0 bits (110), Expect = 1e-04
Identities = 35/107 (32%), Positives = 51/107 (46%), Gaps = 6/107 (5%)
Query: 846 SSLNVMPKTTLDQLSYRGTPLRR---STFLVKAFDGSRKNVLGEIDLPITIGPENFLVTF 902
S+ N PK + + T LR+ T + S LG + LP+T +V F
Sbjct: 314 SASNAAPKAPQPATTKKPTELRKPAAGTCTTMLCETSMS--LGTVVLPVTAQGVVKMVEF 371
Query: 903 QVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF-VKNGKLVTIHGE 948
V D A+Y+ +LG PW+++ V ST HQ +KF GK+ I E
Sbjct: 372 TVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVGKMTGISTE 418
Score = 44.7 bits (104), Expect = 6e-04
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 141 AKELQREIKANRGNGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKM 200
A E+++ I+A R +T +SK+ + ++F+ + YNG + H+ +
Sbjct: 143 APEVEKVIEATR------RTPFTPRISKLRI-REFRDFKLPVYNGKGDLKEHLTSFQVIA 195
Query: 201 GNYK----DNDSLMIHYFQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKP 256
G + D+ + F ++L A W+T L + + F +L+TAF Y +
Sbjct: 196 GRVPLEPHEEDAGLCKLFSENLFGLALTWFTQLEEGSIDNFKQLSTAFIKQYEYFINSDI 255
Query: 257 NREFLRSLSQKKEESFREYAQRWRG 281
L + SQ +E R Y R +G
Sbjct: 256 TEAHLWNFSQSADEPLRTYIYRVQG 280
>At2g14380 putative retroelement pol polyprotein
Length = 764
Score = 293 bits (750), Expect = 8e-79
Identities = 139/282 (49%), Positives = 197/282 (69%)
Query: 1180 DMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWV 1239
DM G+DP + H + P V+QK R+ P+ + + +EV K +DAG ++ V+YPEW+
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535
Query: 1240 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1299
AN V V KK+ K R+C+DF DLNKA PKD+FPLPHID +V+ T +++ SFMD FSGYNQ
Sbjct: 536 ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQ 595
Query: 1300 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMI 1359
I M +D+EKTSFI GT+CYKVMPFGL N GA YQR + +F + K +EVY+DDM+
Sbjct: 596 IPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDML 655
Query: 1360 VKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1419
VKS H+++L FE L KY ++LNP KC FGV SG+ LG+IV+++GIE +P ++RA
Sbjct: 656 VKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRGIEANPKQIRA 715
Query: 1420 IREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLR 1461
I ++ +P+ +K+V+ GR+ ++RFI+ T P ++LLR
Sbjct: 716 ILDLQSPRNKKEVQRLTGRIAGLNRFIARSTDKSLPFYQLLR 757
Score = 81.3 bits (199), Expect = 6e-15
Identities = 57/195 (29%), Positives = 88/195 (44%), Gaps = 27/195 (13%)
Query: 782 EQAYVDHEVTVDRFGGIVGNITACNN---------------LW------------FSEEE 814
+Q + D V R I+G +TAC + LW F+ E+
Sbjct: 277 DQQHNDAPVPRRRVNMIMGGLTACRDSFRSIKEYIKSGAATLWSSPATKEMTPLTFTSED 336
Query: 815 LPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVK 874
L HN L I ++ ++ +L+DTGSS+NV+ K L ++ ++ S +
Sbjct: 337 LFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKMKVHDRHIKPSVRPLT 396
Query: 875 AFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKL 934
FDG+ G I LPI +G F V+D Y+ +LG PWIHD A+ S+ HQ +
Sbjct: 397 GFDGNTMMTNGTIKLPIYLGGAATWHKFVVVDKPTIYNIILGTPWIHDMQAIPSSYHQCI 456
Query: 935 KFVKNGKLVTIHGEE 949
K + + TI G +
Sbjct: 457 KIPTSIGIETIRGNQ 471
>At1g37200 hypothetical protein
Length = 1564
Score = 287 bits (735), Expect = 4e-77
Identities = 136/298 (45%), Positives = 201/298 (66%), Gaps = 4/298 (1%)
Query: 1130 PHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIV 1189
P + I + I + K+ + +G L+ +++ I L+E D FAWS ++ G+ +
Sbjct: 614 PQKSSITQVYIDESDPKQCVGVGQDLDPAIREDFITFLKENKDSFAWSSANLQGISLEVT 673
Query: 1190 EHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKD 1249
H + P P++QK R+ P+ A +++EV + + G + V+YP+W+AN V V K+
Sbjct: 674 SHELNVDPTYRPIKQKRRKLGPERAKAVQDEVDRLLKIGSIREVKYPDWLANPVVVKNKN 733
Query: 1250 GKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREK 1309
GK R+C+DF DLNKA PKD+FPLPHID LV TA ++ SFMD FSGYNQI M P+D+EK
Sbjct: 734 GKWRVCIDFMDLNKACPKDSFPLPHIDRLVKATAGHELLSFMDAFSGYNQILMRPDDQEK 793
Query: 1310 TSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHV 1369
T+FIT CYKVMPFGL N GATYQR + +F D + K +E+Y+DDM+VKSA E+ H+
Sbjct: 794 TAFITD----CYKVMPFGLKNTGATYQRLVNRMFADQLGKTMELYIDDMLVKSAHEKDHL 849
Query: 1370 EYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQ 1427
L + F+ L K++++LNP KC+FGV SG+ LG++V+Q+GIE +P ++ A +MP+P+
Sbjct: 850 PQLRECFKILNKFEMKLNPEKCSFGVPSGEFLGYLVTQRGIEANPKQIAAFIDMPSPK 907
Score = 244 bits (622), Expect = 5e-64
Identities = 167/555 (30%), Positives = 259/555 (46%), Gaps = 91/555 (16%)
Query: 1517 DETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIK 1576
D G+K IYY+SK D ET Y +EK A+ +A++LR YL +H ++ PI+
Sbjct: 927 DHEGQKP--IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPI-VVMTSQPIR 983
Query: 1577 YIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEE 1636
I + ++A+W + LSEYDI ++T+ + K +LAD + PL D
Sbjct: 984 TILHSTTQSSRLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADL----------- 1032
Query: 1637 IMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFE 1696
+G + N KW L DG+ N G G G + SP G I + R+ F
Sbjct: 1033 ---------------DGTNSNKKWLLHVDGSSNRQGSGEGIQLTSPTGEVIEQSFRLGFN 1077
Query: 1697 CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRL 1756
+NN +EYEA I GI+ A MRI+ + + DS LV +Q GE+E ++ Y + + L
Sbjct: 1078 ASNNESEYEALIDGIKLAQGMRIRDIHAHSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 1137
Query: 1757 LTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAI----- 1811
F EL IPR EN DALA L+S +P V+ +E PS +
Sbjct: 1138 TQQFESFELTRIPRGENTSTDALAALASTLDPFVKRIIP---VEGIEHPSIDLTVKHAGM 1194
Query: 1812 ----------------------------GDVIDQA----GENVVDYRP-----WYYDIKQ 1834
G ++A E + Y P W I
Sbjct: 1195 ETSATCNFTRVTRSTTAAARALAAAAEAGAAEEEAKLRTPEQLASYEPEPYNDWRIPIID 1254
Query: 1835 FLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHD 1894
++ PP K + + L+ + R+ + L KR+ + C + + LM +H+
Sbjct: 1255 YIERGITPP--DKWETRKLKAQSARYCIMEGRLMKRSVAGPYMVCTYGQQTKDLMKSMHE 1312
Query: 1895 GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSP 1954
G G+H +G T+ +L DC ++ +C KCQ +A +H PP ++ +SSP
Sbjct: 1313 GQCGSHYSGRTLRCIMLA----------DCIAHSLRCDKCQRHAPTLHQPPEEMSSISSP 1362
Query: 1955 WPFSMWGIDMIGRIEPKASNGH---RFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNI 2011
+PF W +D++ +E AS G + +LV DY TKW+E ++ VT++ V F+ NI
Sbjct: 1363 YPFMKWSMDVVRPME--ASGGKKRLKNLLVLTDYSTKWIEGKAFQQVTEKQVEVFLLENI 1420
Query: 2012 ICRYGVPSKIITDNG 2026
+ R+G+P +I+TDNG
Sbjct: 1421 VYRHGIPYEIVTDNG 1435
Score = 49.3 bits (116), Expect = 3e-05
Identities = 34/98 (34%), Positives = 51/98 (51%), Gaps = 2/98 (2%)
Query: 2145 NLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPD-PRGKWTPNY 2203
+ I+E+R AM + Q+YQ ++ + R F+VGELVL+ S + GK N+
Sbjct: 1465 DFIDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNW 1524
Query: 2204 EGPYVVKKAFSGGALILTHM-DGVELPNPVNADIVKKY 2240
EGPY + + G L + +GV P NA +KKY
Sbjct: 1525 EGPYRITEVVRDGIYKLVKVFNGVPELRPWNAMHLKKY 1562
Score = 41.6 bits (96), Expect = 0.005
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 909 ASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSC 961
A ++ +LGRPW+H AV ST HQ +KF + I+G SQ SS C
Sbjct: 530 APFNAILGRPWLHAMKAVPSTYHQCIKFPSEKGIAVIYG------SQRSSRRC 576
>At4g03800
Length = 637
Score = 274 bits (700), Expect = 5e-73
Identities = 138/337 (40%), Positives = 214/337 (62%), Gaps = 21/337 (6%)
Query: 1181 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1240
MP +DP I+ H + P P++QK R+ + A + ++ K + G + V+YP+WVA
Sbjct: 321 MPDIDPSIICHELNVDPRFKPLKQKRRKLGVERAKAVNGKIDKLLKIGSIREVQYPDWVA 380
Query: 1241 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1300
V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV++TA +++ +FMD F GYNQI
Sbjct: 381 ITVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFLGYNQI 440
Query: 1301 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1360
M+PED+EKTSFIT + GATYQ + +F++ + K +EV +DD +V
Sbjct: 441 MMNPEDQEKTSFIT---------------DRGATYQWLVNKMFNEHLRKTMEVSIDDTLV 485
Query: 1361 KSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1420
KS +E HV++L + FE L +Y+++LN KCTFGV SG+ LG+IV+++GIE +P+++ A
Sbjct: 486 KSLKKEDHVKHLGECFEILNQYQMKLNLAKCTFGVPSGEFLGYIVTKRGIEANPNQINAF 545
Query: 1421 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1480
+ P+ + K+V+ GR+ S T P +++L+ N +W+++C+EAF +K
Sbjct: 546 LKTPSLRNFKEVQRLTGRI------ASRSTDKSLPFYQILKGNNGFLWDEKCEEAFRQLK 599
Query: 1481 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQD 1517
YL PP+L P L +Y+ V + ++ VL ++D
Sbjct: 600 AYLTTPPVLSKPEADEKLYLYVFVSNHAVSGVLVRED 636
Score = 77.4 bits (189), Expect = 9e-14
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 805 CNNLWFSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGT 864
C+++ F EEE + H+ AL I+++ + IS +LVDTGSS++++ + G
Sbjct: 182 CSSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLI---------FLGP 232
Query: 865 PLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAG 924
P + AF LG I LP+ G + +V F V D A+Y+ +LG PWI
Sbjct: 233 PSP-----LVAFTSESAMSLGTIKLPVLAGKMSKIVDFVVFDKPATYNIILGTPWIFQMK 287
Query: 925 AVTSTLHQKLKFVKNGKLVTIHGE 948
AV ST HQ LKF + + TI G+
Sbjct: 288 AVPSTYHQWLKFPTSNGVETIWGD 311
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 267 bits (682), Expect = 6e-71
Identities = 157/497 (31%), Positives = 252/497 (50%), Gaps = 49/497 (9%)
Query: 1163 IIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1222
+I L +Y +S +D+ G+ P + HRI + E + RR +P++ +K E+
Sbjct: 861 LITELMKYRKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRLNPNLKEVVKKEIL 920
Query: 1223 KQIDAGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKA 1264
K +DAG + + WV+ + VPKK G RMC+++R LN A
Sbjct: 921 KLLDAGVIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITGHRMCIEYRKLNVA 980
Query: 1265 SPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVM 1324
S K++FPLP ID +++ A + F+D +SG+ QI + P D+ KT+F P+GTF YK M
Sbjct: 981 SRKEHFPLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTTFTCPYGTFAYKRM 1040
Query: 1325 PFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKL 1384
PFGL NA AT+QR MT++F D+I + VEV++DD V + + L ++ +R + L
Sbjct: 1041 PFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLNLCRVLKRCEETNL 1100
Query: 1385 RLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISR 1444
LN KC F VR G +LG +S++GIEVD K+ + ++ P+T K +R FLG +
Sbjct: 1101 VLNWEKCHFMVREGIVLGRKISEEGIEVDKAKIDVMMQLQPPKTVKDIRSFLGHAGFYRI 1160
Query: 1445 FISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAV 1504
FI + P+ +LL K ++DEC AF IK L+ PI+ P P +
Sbjct: 1161 FIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQAPNWDFPFEII--- 1217
Query: 1505 FDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNH 1564
D + RY EK A+ +A ++ R YLV
Sbjct: 1218 ---------------------------TMDDAQVRYATTEKELLAVVFAFEKFRSYLVGS 1250
Query: 1565 TTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDD 1624
+ + +++I+ K ++ RW +LL E+D+ +K I+ + ADHL+ ++D
Sbjct: 1251 KVTIYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGV-ADHLSRMRIED 1309
Query: 1625 YQPIEFDFPDEEIMYLK 1641
I+ P+E++M ++
Sbjct: 1310 EVLIDDSMPEEQLMAIQ 1326
Score = 204 bits (518), Expect = 6e-52
Identities = 143/419 (34%), Positives = 209/419 (49%), Gaps = 43/419 (10%)
Query: 1827 PWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAE 1886
PWY D +L+S E PP+ S +KK + F D LY D + CV E E E
Sbjct: 1334 PWYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIE 1393
Query: 1887 QLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPP 1945
++ H +G H AT TMS K+L+AG++W +M D ++ KC +
Sbjct: 1394 GILLHCHGFAYGGHFATFKTMS-KILQAGFWWPSMFKDAQEFISKCDSFE---------- 1442
Query: 1946 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA-ASYTNVTKQVVA 2004
F +WGID +G +S G+++ILVAIDY +KWVEA AS+TN +VV
Sbjct: 1443 ----------NFDVWGIDFMGPF--PSSYGNKYILVAIDYVSKWVEAIASHTN-DARVVL 1489
Query: 2005 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2064
K K I R+GVP +I+D G + N + L ++ ++H S G VE +N+
Sbjct: 1490 KLFKTIIFPRFGVPRIVISDGGKHFINKGFENLLKKHGVKHKTS--------GQVEISNR 1541
Query: 2065 NIKRIIQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2123
IK I++K V +T KDW L L YRT ++ G TPF+L+YG LP+E+E ++
Sbjct: 1542 EIKAILEKTVGSTRKDWSAKLNDTLWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAM 1601
Query: 2124 RVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2183
+ + R QLN + + R++A + Y+ R K+ DKK+ R+FKVG+
Sbjct: 1602 WAVKLLNFDIKTAEEKRLIQLNDLNKIRLEAYESSKIYKERTKSFHDKKIVSRDFKVGDQ 1661
Query: 2184 VL--KGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2240
VL R+ P GK + GP+ V GA+ L +G VN +KKY
Sbjct: 1662 VLLFNSRLRLFP---GKLKSRWSGPFSVTAVRPYGAITLAGKNG---DFTVNGQRLKKY 1714
Score = 39.3 bits (90), Expect = 0.026
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 181 DKYNGLTC--PQNHIVKYVRKMGNYKDN----DSLMIHYFQDSLMEDAAEWYTSLSKDDV 234
+K++GL P +H+ ++ R K N D + F SL + A +W SL + +
Sbjct: 52 NKFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSI 111
Query: 235 HTFDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRG 281
++++ AF + + N+R R + +Q E+F E +R++G
Sbjct: 112 TSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWERFKG 158
>At2g10780 pseudogene
Length = 1611
Score = 266 bits (679), Expect = 1e-70
Identities = 156/461 (33%), Positives = 248/461 (52%), Gaps = 18/461 (3%)
Query: 1150 KIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGL-DPMIVEHRIPTKPECPPVRQKLRR 1208
++GA+ E K I ++ E+ D+FA P DP +E +P P+ + R
Sbjct: 615 EVGASAE----LKDIPIVNEFSDVFAAVSGVPPDRSDPFTIE----LEPGTTPISKAPYR 666
Query: 1209 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1268
P K+K ++++ +D GF+ P W A ++ V KKDG R+C+D+R LNK + K+
Sbjct: 667 MAPAEMAKLKKQLEELLDKGFIRPSSSP-WGAPVLFVKKKDGSFRLCIDYRGLNKVTVKN 725
Query: 1269 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1328
+PLP ID L+D ++ FS +D SGY+QI + P D KT+F T + F + VMPFGL
Sbjct: 726 KYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYDHFEFVVMPFGL 785
Query: 1329 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNP 1388
NA A + + M +F D + + V ++++D++V S E H E+L + ERLR+++L
Sbjct: 786 TNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELFAKL 845
Query: 1389 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1448
+KC+F RS LG ++S +G+ VDP+K+R+I+E P P+ ++R FLG Y RF+
Sbjct: 846 SKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMS 905
Query: 1449 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1508
+ P+ +L K+ W+DEC+++F +K L P+LV P EG P +Y
Sbjct: 906 FASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLTNAPVLVLPEEGEPYTVYTDASIVG 965
Query: 1509 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1568
+GCVL Q K I Y S++ E Y + A+ + K R YL +
Sbjct: 966 LGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRSYLYGAKVQI 1019
Query: 1569 ISRMDPIKYIFEKAAVTGKIARWQMLLSEY--DIVFKTQKA 1607
+ +KYIF + + + RW L+++Y DI + KA
Sbjct: 1020 YTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKA 1060
Score = 98.2 bits (243), Expect = 5e-20
Identities = 104/483 (21%), Positives = 199/483 (40%), Gaps = 47/483 (9%)
Query: 1763 VELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENV 1822
+++ + P NQ+ADAL+ S + V L+ + HV A+ ++ G
Sbjct: 1051 LDIAYHPGKANQVADALSRRRSEVEAER-SQVDLVNMMGT---LHVNALSKEVEPLGLGA 1106
Query: 1823 VDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLA--GRFLLDGDILYKRNYDMVLLRCV 1880
D I+ R+ Q+ KT + + G +++G + CV
Sbjct: 1107 ADQADLLSRIR-LAQERDEEIKGWAQNNKTEYQTSNNGTIVVNGRV------------CV 1153
Query: 1881 DEHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 1938
A E+++ + H F H + M R L R Y+W+ M+ D ++ KC CQ+
Sbjct: 1154 PNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMKKDVARWVAKCPTCQLVK 1212
Query: 1939 NKIHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 1997
+ VP L + P W + +D + + + H + V +D TK + ++
Sbjct: 1213 AEHQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISD 1272
Query: 1998 VT-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 2056
+++A+ + I+ +G+P I++D T + +A + + S+ Y PQ +
Sbjct: 1273 KDGAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTD 1332
Query: 2057 GAVEAANKNIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLP 2115
E + ++ +++ V + +W + L Y + ++S G +P+ +YG P
Sbjct: 1333 EQSERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTP 1392
Query: 2116 LEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHP 2175
L + E +L +++ ++ K +A R +SY +K+
Sbjct: 1393 L-----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRRKE 1440
Query: 2176 REFKVGELVLKGRISQQP----DPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNP 2231
EF+VG+LV ++ + R K +P Y GPY V + A L +LP
Sbjct: 1441 LEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKL------DLPPK 1494
Query: 2232 VNA 2234
+NA
Sbjct: 1495 LNA 1497
Score = 32.3 bits (72), Expect = 3.2
Identities = 26/131 (19%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 209 LMIHYFQDSLMEDAAEWYTSLSK---DDVHTFDELATAFRSHYGFNTRLKPNREFLRSLS 265
+ +H+ + DA W+ ++ K D+V +F + F Y F E
Sbjct: 215 IAVHFLEG----DAHNWWLTVEKRRGDEVRSFADFEDEFNKKY-FPPEAWDRLECAYLDL 269
Query: 266 QKKEESFREYAQRWRGAAARITPALDEEE-MTQTFLKTLKKDYVERMIIAAPNNFSEMVT 324
+ + REY + + + L+EE+ + F++ L+ + ++ N+ SE+V
Sbjct: 270 VQGNRTVREYDEEFNRLRRYVGRELEEEQAQLRRFIRGLRIEIRNHCLVRTFNSVSELVE 329
Query: 325 MGTRLEEAVRD 335
+EE + +
Sbjct: 330 RAAMIEEGIEE 340
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 263 bits (671), Expect = 1e-69
Identities = 150/456 (32%), Positives = 246/456 (53%), Gaps = 13/456 (2%)
Query: 1164 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1222
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 457 IRVVQEFQDVF----QSLQGLPPSQSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLK 512
Query: 1223 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1282
+ GF+ P W A ++ V KKDG R+C+D+R+LN+ + K+ +PLP ID L+D
Sbjct: 513 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQL 571
Query: 1283 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1342
+ FS +D SGY+QI ++ D KT+F T +G F + VMPFGL NA A + R M ++
Sbjct: 572 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSV 631
Query: 1343 FHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1402
F + + + V +++DD++V S E+ +L ++ E+LR+ KL +KC+F R LG
Sbjct: 632 FQEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLG 691
Query: 1403 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1462
IVS +G+ VDP+K+ AIR+ P P ++R FLG Y RF+ + P+ KL K
Sbjct: 692 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGK 751
Query: 1463 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1522
+ P VW+ EC+E F S+K L P+L P G+P ++Y +GCVL Q +
Sbjct: 752 DVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHGK---- 807
Query: 1523 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1582
I Y S++ E Y + A+ +A K R YL + + +KYIF +
Sbjct: 808 --VIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQP 865
Query: 1583 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1618
+ + RW L+++YD+ K +++ D L+
Sbjct: 866 ELNLRQRRWMELVADYDLEIAYHPG-KANVVVDALS 900
Score = 32.7 bits (73), Expect = 2.5
Identities = 28/113 (24%), Positives = 50/113 (43%), Gaps = 10/113 (8%)
Query: 1911 LRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSP-WPFSMWGIDMIGRIE 1969
L+ Y W+ M+ D + +C CQ+ + V L + P W + +D++ +
Sbjct: 965 LKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFITMDLV--VG 1022
Query: 1970 PKASNGHRFILVAIDYFTKWVEAASYTNVTK----QVVAKFIKNNIICRYGVP 2018
+ S I V +D TK +A + + K V+AK + I+ +GVP
Sbjct: 1023 LRVSRTKDAIWVIVDRLTK---SAHFLAIRKTDGAAVLAKKFVSEIVKLHGVP 1072
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 258 bits (660), Expect = 2e-68
Identities = 149/456 (32%), Positives = 244/456 (52%), Gaps = 13/456 (2%)
Query: 1164 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1222
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 483 IRVIQEFEDVF----QSLQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMTELKKQLE 538
Query: 1223 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1282
+ GF+ P W A ++ V KKDG R+C+D+R LN + K+ +PLP ID L+D
Sbjct: 539 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQL 597
Query: 1283 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1342
+ FS +D SGY+QI ++ D KT+F T +G F + VMPF L NA A + R M ++
Sbjct: 598 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSV 657
Query: 1343 FHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1402
F + + + V +++DD++V S E+H +L ++ E+LR+ KL +KC+F R LG
Sbjct: 658 FQEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLG 717
Query: 1403 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1462
IVS +G+ VDP+K+ AIR+ P P ++R FL Y RF+ + P+ KL K
Sbjct: 718 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGK 777
Query: 1463 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1522
+ P VW+ EC+E F S+K L P+L P G+P ++Y +GCVL Q+ +
Sbjct: 778 DVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQRGK---- 833
Query: 1523 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1582
I Y S++ E Y + + +A K R YL + + +KYIF +
Sbjct: 834 --VIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQP 891
Query: 1583 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1618
+ + RW L+++YD+ K +++AD L+
Sbjct: 892 ELNLRQMRWMELVADYDLEIAYHPG-KANVVADALS 926
Score = 77.4 bits (189), Expect = 9e-14
Identities = 76/336 (22%), Positives = 136/336 (39%), Gaps = 57/336 (16%)
Query: 1881 DEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANK 1940
DE +++ + H F H M R L R Y W+ M+ D + +C CQ+ +
Sbjct: 1012 DEELRREILSEAHASMFSIHPGATKMYRDLKRY-YQWVGMKRDVANWVAECDVCQLVKAE 1070
Query: 1941 IHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTK 2000
VP ++W V +D TK +A + + K
Sbjct: 1071 HQVPD------------AIW--------------------VIMDRLTK---SAHFLAIRK 1095
Query: 2001 Q----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 2056
V+AK + I+ +GVP I++D + +A + + S+ Y PQ +
Sbjct: 1096 TDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTD 1155
Query: 2057 GAVEAANKNIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLP 2115
G E + ++ +++ V + W + L Y + ++S G PF +YG P
Sbjct: 1156 GQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTP 1215
Query: 2116 LEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHP 2175
L + E + A++ Q +++ +++ +A AR +SY DK+
Sbjct: 1216 LR-----WTQVEERSIYGADYVQETTERIRVLKLNMKEAQARQRSYA-------DKRRRE 1263
Query: 2176 REFKVGELV-LKGRISQQPDP---RGKWTPNYEGPY 2207
EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1264 LEFEVGDRVYLKMAMLRGPNRSILETKLSPRYMGPF 1299
>At3g11970 hypothetical protein
Length = 1499
Score = 251 bits (640), Expect = 4e-66
Identities = 161/506 (31%), Positives = 268/506 (52%), Gaps = 27/506 (5%)
Query: 1123 QEKKAIQPHQEEIELINIGTEENKREIKI----GATLEEGVKQKIIQLLREYPDIFAWSY 1178
Q+ + +Q Q ++ ++ + E ++ T E G + + ++L EYPDIF
Sbjct: 521 QKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVEEVLNEYPDIFI--- 577
Query: 1179 EDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDA----GFLMT 1232
+ L P +H +I PV Q+ R ++ KNE+ K ++ G +
Sbjct: 578 -EPTALPPFREKHNHKIKLLEGSNPVNQRPYR----YSIHQKNEIDKLVEDLLTNGTVQA 632
Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
P + + +V V KKDG R+CVD+R+LN + KD+FP+P I+ L+D + +FS +D
Sbjct: 633 SSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
+GY+Q++M P+D +KT+F T G F Y VMPFGL NA AT+Q M +F + K V
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
V+ DD++V S+ E+H ++L ++FE +R KL +KC F V + LG +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
DP K++A++E P P T KQ+RGFLG Y RF+ GP+ L K W
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPL-HALTKTDAFEWTAVA 870
Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1532
Q+AF+ +K L + P+L P+ + ++ + +G VL Q+ H + Y+S++
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEG------HPLAYISRQ 924
Query: 1533 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1592
+ ++ EK A+ +A ++ RHYL+ + + +KY+ E+ T +W
Sbjct: 925 LKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWL 984
Query: 1593 MLLSEYDIVFKTQKAIKGSILADHLA 1618
L E+D + ++ K +++AD L+
Sbjct: 985 PKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 82.8 bits (203), Expect = 2e-15
Identities = 86/330 (26%), Positives = 139/330 (42%), Gaps = 31/330 (9%)
Query: 1892 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVM 1951
+H G H+ G ++ + ++ +YW M D Y R C CQ + P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 1952 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 2009
P P ++W + IE S G I+V +D +K + ++ + VA +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLD 1204
Query: 2010 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 2069
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 2070 IQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2128
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2129 AKLS-EAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKG 2187
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVY-- 1369
Query: 2188 RISQQP--------DPRGKWTPNYEGPYVV 2209
+ QP K +P Y GPY +
Sbjct: 1370 -VKLQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At1g36590 hypothetical protein
Length = 1499
Score = 251 bits (640), Expect = 4e-66
Identities = 161/506 (31%), Positives = 268/506 (52%), Gaps = 27/506 (5%)
Query: 1123 QEKKAIQPHQEEIELINIGTEENKREIKI----GATLEEGVKQKIIQLLREYPDIFAWSY 1178
Q+ + +Q Q ++ ++ + E ++ T E G + + ++L EYPDIF
Sbjct: 521 QKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSELGEESVVEEVLNEYPDIFI--- 577
Query: 1179 EDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDA----GFLMT 1232
+ L P +H +I PV Q+ R ++ KNE+ K ++ G +
Sbjct: 578 -EPTALPPFREKHNHKIKLLEGSNPVNQRPYR----YSIHQKNEIDKLVEDLLTNGTVQA 632
Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
P + + +V V KKDG R+CVD+R+LN + KD+FP+P I+ L+D + +FS +D
Sbjct: 633 SSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKID 691
Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
+GY+Q++M P+D +KT+F T G F Y VMPFGL NA AT+Q M +F + K V
Sbjct: 692 LRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVL 751
Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
V+ DD++V S+ E+H ++L ++FE +R KL +KC F V + LG +S +GIE
Sbjct: 752 VFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIET 811
Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
DP K++A++E P P T KQ+RGFLG Y RF+ GP+ L K W
Sbjct: 812 DPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPL-HALTKTDAFEWTAVA 870
Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1532
Q+AF+ +K L + P+L P+ + ++ + +G VL Q+ H + Y+S++
Sbjct: 871 QQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEG------HPLAYISRQ 924
Query: 1533 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1592
+ ++ EK A+ +A ++ RHYL+ + + +KY+ E+ T +W
Sbjct: 925 LKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWL 984
Query: 1593 MLLSEYDIVFKTQKAIKGSILADHLA 1618
L E+D + ++ K +++AD L+
Sbjct: 985 PKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 78.2 bits (191), Expect = 5e-14
Identities = 85/330 (25%), Positives = 139/330 (41%), Gaps = 31/330 (9%)
Query: 1892 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVM 1951
+H G H+ G ++ + ++ +Y M D Y R C CQ + P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 1952 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 2009
P P ++W + IE S G I+V +D +K + ++ + VA+ +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAQAYLD 1204
Query: 2010 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 2069
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 2070 IQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2128
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2129 AKLS-EAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKG 2187
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVY-- 1369
Query: 2188 RISQQP--------DPRGKWTPNYEGPYVV 2209
+ QP K +P Y GPY +
Sbjct: 1370 -VKLQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 250 bits (639), Expect = 6e-66
Identities = 144/414 (34%), Positives = 228/414 (54%), Gaps = 16/414 (3%)
Query: 1150 KIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGL-DPMIVEHRIPTKPECPPVRQKLRR 1208
++GA+ E K I ++ E+ D+FA P DP +E +P P+ + R
Sbjct: 110 EVGASAE----LKDILIVNEFSDVFAAVSGVPPDRSDPFTIE----LEPGTTPISKAPYR 161
Query: 1209 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1268
P ++K ++++ + GF+ P W A ++ V KKDG R+C+D+R LNK + K+
Sbjct: 162 MAPAEMAELKKQLEELLAKGFIRPSSSP-WGAPVLFVKKKDGSFRLCIDYRGLNKVTVKN 220
Query: 1269 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1328
+PLP ID L+D ++ FS +D SGY+QI + P D KT+F T +G F + VMPFGL
Sbjct: 221 KYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAFRTRYGHFEFVVMPFGL 280
Query: 1329 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNP 1388
NA A + + M +F D + + V +++DD++V S E H E+L + ERLR+++L
Sbjct: 281 TNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVHSKSWEAHQEHLRAVLERLREHELFAKL 340
Query: 1389 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1448
+K +F RS LG ++S +G+ VDP+K+R+I+E P P+ ++R FLG Y RF+
Sbjct: 341 SKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRRFVMS 400
Query: 1449 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1508
+ P+ +L K+ W+DEC+++F +K L+ P+LV P EG P +Y
Sbjct: 401 FASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLINAPVLVLPEEGEPYTVYTDASIVG 460
Query: 1509 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLV 1562
+GCVL Q K I Y S++ E Y + A+ +A K R YL+
Sbjct: 461 LGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKIWRSYLI 508
Score = 100 bits (248), Expect = 1e-20
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 22/340 (6%)
Query: 1879 CVDEHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQI 1936
CV A E+++ + H F H + M R L R Y+W+ M D ++ KC CQ+
Sbjct: 544 CVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMRKDVARWVAKCPTCQL 602
Query: 1937 YANKIHVPPHAL-NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 1995
+ VP L N+ S W + +D + R+ + H + V +D TK +
Sbjct: 603 VKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSAHFMAI 662
Query: 1996 TNVT-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQ 2054
++ +++A+ + I+ +G+P I++D T + A + + S+ Y PQ
Sbjct: 663 SDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQ 722
Query: 2055 MNGAVEAANKNIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 2113
+G E + ++ +++ V + +W + L Y + ++S G +P+ +YG
Sbjct: 723 TDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACR 782
Query: 2114 LPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 2173
PL + E +L +++ ++ K +A R +SY +K+
Sbjct: 783 TPL-----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRR 830
Query: 2174 HPREFKVGELVLKGRISQQP----DPRGKWTPNYEGPYVV 2209
EF+VG+LV ++ + R K +P Y GPY V
Sbjct: 831 KELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKV 870
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 249 bits (636), Expect = 1e-65
Identities = 153/501 (30%), Positives = 253/501 (49%), Gaps = 25/501 (4%)
Query: 1121 LEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYED 1180
L+ + + + E L+ G + I A E + +K + E+ D+F +
Sbjct: 401 LDCHRGRVSFERPEGSLVYQGVRPTSGSLVISAVQAEKMIEKGCEAYLEFEDVF----QS 456
Query: 1181 MPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWV 1239
+ GL P + I +P P+ + R P ++K +++ + A L
Sbjct: 457 LQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLLGAPVLF-------- 508
Query: 1240 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1299
V KKDG R+C+D+R LN + K+ +PLP ID L+D + FS +D SGY+
Sbjct: 509 -----VKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHL 563
Query: 1300 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMI 1359
I ++ D KT+F T +G F + VMPFGL NA A + R M ++F +++ + V +++DD++
Sbjct: 564 IPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDIL 623
Query: 1360 VKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1419
V S E+H +L ++ E+LR+ KL +KC+F R LG IVS +G+ VDP+K+ A
Sbjct: 624 VYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 683
Query: 1420 IREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSI 1479
IR+ P ++R FLG Y RF+ + P+ KL K+ P VW+ EC+E F S+
Sbjct: 684 IRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 743
Query: 1480 KNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETR 1539
K L P+L P G P ++Y +GCVL Q+ + I Y S++ E
Sbjct: 744 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGK------VIAYASRQLRKHEGN 797
Query: 1540 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1599
Y + A+ +A K R YL + + +KYIF + + + +W L+++YD
Sbjct: 798 YPTHDLEMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYD 857
Query: 1600 IVFKTQKAIKGSILADHLAYQ 1620
+ K +++AD L+++
Sbjct: 858 LEIAYHPG-KANVVADALSHK 877
Score = 69.7 bits (169), Expect = 2e-11
Identities = 70/295 (23%), Positives = 124/295 (41%), Gaps = 27/295 (9%)
Query: 1923 DCYQYARKCHKCQIYANKIHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILV 1981
D + +C CQ+ + VP L + P W + ID + + S I V
Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFV--VGLPVSRTKDAIWV 999
Query: 1982 AIDYFTKWVEAASYTNVTKQ----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQAL 2037
+D TK +A + + K V+AK + I+ +GVP I++D + + +A
Sbjct: 1000 IVDRLTK---SAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAF 1056
Query: 2038 CEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVR 2096
E + S+ Y PQ G E + ++ +++ V + W + L Y +
Sbjct: 1057 QAEMGTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYP 1116
Query: 2097 SSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMA 2156
+S G PF +Y PL L + E + A++ Q +++ +++ +A
Sbjct: 1117 ASIGMAPFEALYERPCRTPL-----CLTQVGERSIYGADYVQETTERIRVLKLNMKEAQD 1171
Query: 2157 RGQSYQARMKTAFDKKVHPREFKVGELV-LKGRISQQPD---PRGKWTPNYEGPY 2207
R +SY DK+ EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1172 RQRSYA-------DKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPF 1219
>At1g35370 hypothetical protein
Length = 1447
Score = 240 bits (613), Expect = 6e-63
Identities = 160/497 (32%), Positives = 262/497 (52%), Gaps = 20/497 (4%)
Query: 1123 QEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQ-LLREYPDIFAWSYEDM 1181
Q+ +A Q + + + ++E + I A + V++ ++Q ++ E+PD+FA +
Sbjct: 503 QKTQADQIQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQNIVEEFPDVFAEPTDLP 562
Query: 1182 PGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVAN 1241
P + +H+I PV Q+ R +I VQ I +G + P + +
Sbjct: 563 PFREKH--DHKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQVSSSP-FASP 619
Query: 1242 IVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 1301
+V V KKDG R+CVD+ +LN + KD F +P I+ L+D S VFS +D +GY+Q++
Sbjct: 620 VVLVKKKDGTWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKIDLRAGYHQVR 679
Query: 1302 MSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVK 1361
M P+D +KT+F T G F Y VM FGL NA AT+Q M ++F D + K V V+ DD+++
Sbjct: 680 MDPDDIQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVLVFFDDILIY 739
Query: 1362 SADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIR 1421
S+ E+H E+L +FE +R +KL F S + LG +S + IE DP K++A++
Sbjct: 740 SSSIEEHKEHLRLVFEVMRLHKL--------FAKGSKEHLGHFISAREIETDPAKIQAVK 791
Query: 1422 EMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKN 1481
E P P T KQVRGFLG Y RF+ + GP+ L K W+ E Q AFD++K
Sbjct: 792 EWPTPTTVKQVRGFLGFAGYYRRFVRNFGVIAGPL-HALTKTDGFCWSLEAQSAFDTLKA 850
Query: 1482 YLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYT 1541
L P+L PV + ++ E+ C G + +K H + Y+S++ + +
Sbjct: 851 VLCNAPVLALPVFDKQFMV------ETDACGQGIRAVLMQKGHPLAYISRQLKGKQLHLS 904
Query: 1542 MLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIV 1601
+ EK A +A ++ RHYL+ + + +KY+ E+ T +W L E+D
Sbjct: 905 IYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYE 964
Query: 1602 FKTQKAIKGSILADHLA 1618
+ ++ K +++AD L+
Sbjct: 965 IQYRQG-KENLVADALS 980
Score = 85.9 bits (211), Expect = 2e-16
Identities = 87/350 (24%), Positives = 149/350 (41%), Gaps = 32/350 (9%)
Query: 1902 TGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWG 1961
+G S + +++ +YW M D + R C CQ + P L + P P +W
Sbjct: 1068 SGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPL--PIPDKIWC 1125
Query: 1962 IDMIGRIEPKASNGHR-FILVAIDYFTKWVEAASYTN-VTKQVVAKFIKNNIICRYGVPS 2019
+ IE ++G + I+V +D +K + + + VA+ +N+ +G P+
Sbjct: 1126 DVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPT 1185
Query: 2020 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTYKD 2079
I++D ++ + + +E SS Y PQ +G E N+ ++ ++ M
Sbjct: 1186 SIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPH 1245
Query: 2080 -WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQ 2138
W++ LP A + Y T SS+ TPF LVYG + L +V + A+ Q
Sbjct: 1246 LWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARS-----LQ 1300
Query: 2139 NRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQP----- 2193
R + L ++ M A Q RMK D+ R F +G+ V + QP
Sbjct: 1301 ERENMLLFLKFHLMRA-------QHRMKQFADQHRTERTFDIGDFVY---VKLQPYRQQS 1350
Query: 2194 ---DPRGKWTPNYEGPY-VVKKAFSGGALILTHMDGVELPNPVNADIVKK 2239
K +P Y GPY +++K G ++ +LP+ V DI +K
Sbjct: 1351 VVLRVNQKLSPKYFGPYKIIEKC--GEVMVGNVTTSTQLPS-VLPDIFEK 1397
>At2g14040 putative retroelement pol polyprotein
Length = 841
Score = 234 bits (598), Expect = 3e-61
Identities = 152/499 (30%), Positives = 240/499 (47%), Gaps = 77/499 (15%)
Query: 1167 LREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQID 1226
LR+Y +S +D+ G+ P + H I + E + RR + ++ +K E+ K +D
Sbjct: 340 LRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRLNSNLRDVVKKEIMKLLD 399
Query: 1227 AGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKASPKD 1268
AG + + WV+ + VPKK G + RMC+D+R LN A+ KD
Sbjct: 400 AGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTGHRMCIDYRKLNSATRKD 459
Query: 1269 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1328
NFPL ID +++ + + F+DG+ G+ QI + P+D+EKT+F P+GTF Y+ MPFGL
Sbjct: 460 NFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTTFTCPYGTFAYRRMPFGL 519
Query: 1329 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNP 1388
NA AT+Q M +F DMI +EV++DD +V E++H L LN
Sbjct: 520 CNAPATFQHCMKYIFSDMIEDFMEVFIDDFLVLQRCEDKH---------------LVLNW 564
Query: 1389 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1448
K F VR G +LG +S+KG+EVD K+ +R FLG + RFI
Sbjct: 565 EKSHFMVRDGIVLGHKISEKGVEVDRAKIEIMR-------------FLGHAGFYRRFIKD 611
Query: 1449 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1508
+ P +LL K Q ++D C +AF+ +K L+ I+ PP P + D
Sbjct: 612 FSKIARPCTQLLCKEQKSEFDDTCLQAFNIVKESLVSALIVQPPEWELPFEVICDASDYV 671
Query: 1509 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1568
+G VLGQ+ + KK HAIYY S+ + ++ HT
Sbjct: 672 VGAVLGQRKD--KKLHAIYYASRTLDGAQ-----------------------VIVHTVHA 706
Query: 1569 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPI 1628
++Y+ K ++ RW +LL ++D+ K +K I+ + AD+L+ + + +
Sbjct: 707 -----ALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEV-ADNLSRLRVQEEVLM 760
Query: 1629 EFDFPDEEIMYLKSKDCDE 1647
P E + ++ DE
Sbjct: 761 RDILPGENLASIEDCYMDE 779
>At2g06320 putative retroelement pol polyprotein
Length = 466
Score = 207 bits (526), Expect = 7e-53
Identities = 145/440 (32%), Positives = 219/440 (48%), Gaps = 16/440 (3%)
Query: 1808 VFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDIL 1867
+F+IG Q V PWY D +L PP+ + ++K R + D L
Sbjct: 20 LFSIGKEFHQLNA-VEGGSPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYL 78
Query: 1868 YKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQ 1926
Y D + V E E E ++ HD +G H AT T+S K+L+AG++W M D +
Sbjct: 79 YTLCKDKIYRSYVSEDEVEGILLHCHDSAYGGHFATFKTVS-KILQAGFWWPTMFKDAQE 137
Query: 1927 YARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 1986
+ KC CQ N N + F +WGID +G +S G+++ILV +DY
Sbjct: 138 FVSKCDSCQRKGNISRRNEMPQNPILEVDIFDVWGIDFMGPFP--SSYGNKYILVVVDYV 195
Query: 1987 TKWVEA-ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEH 2045
+KWVEA AS TN K VV K K I R+GV +I+D G + N V + L ++ ++H
Sbjct: 196 SKWVEAIASPTNDAK-VVLKLFKTIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKH 254
Query: 2046 HNSSPYRPQMNGAVEAANKNIKRIIQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPF 2104
++PY PQ +G VE +N+ IK I++K V T KDW L AL Y+T ++ G TPF
Sbjct: 255 KVATPYHPQTSGQVEISNREIKTILEKTVGITRKDWSTKLDDALWAYKTAFKTPIGTTPF 314
Query: 2105 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQAR 2164
+L+ L +E+E ++ + + R QL+ ++E R++A + Y+ R
Sbjct: 315 NLLCVKSCHLHVELEYKAMWAVKLLNFDIKTAEEKRLIQLSELDEIRLEAYESSKIYKER 374
Query: 2165 MKTAFDKKVHPREFKVGELVL--KGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTH 2222
K DKK+ ++F+VG+ VL R+ P GK + GP+ + + GA+ L
Sbjct: 375 TKLFHDKKIITKDFQVGDQVLLFNSRLKIFP---GKLKSRWSGPFCITEVRPYGAVTLAG 431
Query: 2223 MDGVELPNPVNADIVKKYFA 2242
GV VN +KKY A
Sbjct: 432 KSGV---FTVNGQRLKKYLA 448
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,206,734
Number of Sequences: 26719
Number of extensions: 2411852
Number of successful extensions: 8693
Number of sequences better than 10.0: 235
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 7726
Number of HSP's gapped (non-prelim): 682
length of query: 2242
length of database: 11,318,596
effective HSP length: 115
effective length of query: 2127
effective length of database: 8,245,911
effective search space: 17539052697
effective search space used: 17539052697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC134824.6