BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.6 + phase: 0
(1667 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 713 0.0
At1g48710 hypothetical protein 707 0.0
At2g15650 putative retroelement pol polyprotein 679 0.0
At3g60170 putative protein 676 0.0
At3g25450 hypothetical protein 617 e-176
At2g20460 putative retroelement pol polyprotein 569 e-162
At1g31210 putative reverse transcriptase 566 e-161
At2g05390 putative retroelement pol polyprotein 563 e-160
At3g59720 copia-type reverse transcriptase-like protein 560 e-159
At1g70010 hypothetical protein 555 e-158
At2g16000 putative retroelement pol polyprotein 551 e-156
At1g37110 525 e-149
At3g45520 copia-like polyprotein 520 e-147
At2g07550 putative retroelement pol polyprotein 515 e-146
At2g16670 putative retroelement pol polyprotein 514 e-145
At2g13930 putative retroelement pol polyprotein 514 e-145
At4g27210 putative protein 501 e-141
At5g35820 copia-like retrotransposable element 500 e-141
At2g21460 putative retroelement pol polyprotein 499 e-141
At1g26990 polyprotein, putative 490 e-138
>At3g61330 copia-type polyprotein
Length = 1352
Score = 713 bits (1841), Expect = 0.0
Identities = 375/983 (38%), Positives = 566/983 (57%), Gaps = 43/983 (4%)
Query: 673 INNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINF- 731
I+NV+ + +K N+LS+ Q + GYD+ N ++ +++ IT ++ +N
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450
Query: 732 SDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQ 791
+D+A +C ++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C
Sbjct: 451 NDIAQCLKMCY---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCL 506
Query: 792 KGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIK 851
GK K SF + +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K
Sbjct: 507 LGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLK 566
Query: 852 SKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQ 911
K E+F F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQ
Sbjct: 567 EKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQ 626
Query: 912 QNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKG 971
QNGVVERKNRT+ EMAR+M+ L K WAEAV + Y+ NR + + T E + G
Sbjct: 627 QNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSG 686
Query: 972 RRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESM 1031
R+P +S+ G + + KL+ K+++ IF GY SK Y++YN +T+ S
Sbjct: 687 RKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISR 746
Query: 1032 HVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAESNS 1091
++ FD+ S + + N ED E P+ E +E + P T S
Sbjct: 747 NIVFDEEGEWDWNSNEEDYNFFPHFEEDEPE---PTREEPPSEEPTTPPTSPTSSQIEES 803
Query: 1092 EAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESL 1151
+E +P+ ++ + +N + + +L
Sbjct: 804 SSERTPRFRSIQELYEVTENQENL----------------------------------TL 829
Query: 1152 IGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKL 1211
L + EP ++A+ W AM EE+ Q+ND W+L P+ IG KWV++ K
Sbjct: 830 FCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKK 889
Query: 1212 NEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKS 1271
N +GEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDVKS
Sbjct: 890 NSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKS 949
Query: 1272 AFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFER 1331
AFLNG +EEEVY++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF +
Sbjct: 950 AFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIK 1009
Query: 1332 GQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLG 1391
+ L+ + K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LG
Sbjct: 1010 CPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLG 1069
Query: 1392 IQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGM 1451
I++ Q G+++ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ +
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1129
Query: 1452 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1511
+GSL YLT +RPDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYK
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1189
Query: 1512 LIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1571
L+G+ D+D+ GD +RKSTSG ++G+ +W SK+Q + +ST EAEY++A SC
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHA 1249
Query: 1572 LWMKHQLEDYQI-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILD 1630
+W+++ L++ + I+ DN +AI L+KNP+ H R+KHI+ ++H+IR V K +
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 1631 IQFIDTEHQWADIFTKPLSVERF 1653
++++ T Q AD FTKPL E F
Sbjct: 1310 LEYVKTHDQVADFFTKPLKRENF 1332
Score = 80.5 bits (197), Expect = 8e-15
Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +M++ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSIA---LPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + IA L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKS 339
+ + K G K+ + C+NC K GH+ ++C +KF+ K+
Sbjct: 249 PHEDNTNQRGENSSRGRGK-GHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKA 306
>At1g48710 hypothetical protein
Length = 1352
Score = 707 bits (1826), Expect = 0.0
Identities = 375/987 (37%), Positives = 568/987 (56%), Gaps = 45/987 (4%)
Query: 673 INNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINF- 731
I+NV+ + +K N+LS+ Q + GYD+ N ++ +++ IT ++ +N
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450
Query: 732 SDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQ 791
+D+A +C ++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C
Sbjct: 451 NDIAQCLKMCY---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCL 506
Query: 792 KGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIK 851
GK K SF + + LEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K
Sbjct: 507 LGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLK 566
Query: 852 SKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQ 911
K E+F F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQ
Sbjct: 567 EKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQ 626
Query: 912 QNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKG 971
QNGV ERKNRT+ EMAR+M+ L K WAEAV + Y+ NR + + T E + G
Sbjct: 627 QNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSG 686
Query: 972 RRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESM 1031
R+ +S+ G + + KL+ K+++ IF GY SK Y++YN +T+ S
Sbjct: 687 RKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISR 746
Query: 1032 HVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAESNS 1091
++ FD+ S + + N ED E P+ E +E + P T S
Sbjct: 747 NIVFDEEGEWDWNSNEEDYNFFPHFEEDEPE---PTREEPPSEEPTTPPTSPTSSQIEES 803
Query: 1092 EAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESL 1151
+E +P+ ++ + +N + + +L
Sbjct: 804 SSERTPRFRSIQELYEVTENQENL----------------------------------TL 829
Query: 1152 IGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKL 1211
L + EP +EA+ W AM EE+ Q+ND W+L P+ IG KWV++ K
Sbjct: 830 FCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKK 889
Query: 1212 NEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKS 1271
N +GEV R KARLVA+GY Q+ GIDY E FAPVARLE +RL++S A + ++QMDVKS
Sbjct: 890 NSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKS 949
Query: 1272 AFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFER 1331
AFLNG +EEEVY++QP G+ D V +LKK+LYGLKQAPRAW R+ + + DF +
Sbjct: 950 AFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIK 1009
Query: 1332 GQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLG 1391
+ L+ + K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LG
Sbjct: 1010 CPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLG 1069
Query: 1392 IQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGM 1451
I++ Q G+++ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ +
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1129
Query: 1452 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1511
+GSL YLT +RPDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYK
Sbjct: 1130 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1189
Query: 1512 LIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1571
L+G+ D+D+ GD +RKSTSG ++G+ +W SK+Q + +ST EAEY++A SC
Sbjct: 1190 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHA 1249
Query: 1572 LWMKHQLEDYQI-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILD 1630
+W+++ L++ + I+ DN +AI L+KNP+ H R+KHI+ ++H+IR V K +
Sbjct: 1250 IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQ 1309
Query: 1631 IQFIDTEHQWADIFTKPLSVERFEFIK 1657
++++ T Q ADIFTKPL +R +FIK
Sbjct: 1310 LEYVKTHDQVADIFTKPL--KREDFIK 1334
Score = 79.7 bits (195), Expect = 1e-14
Identities = 70/327 (21%), Positives = 148/327 (44%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +M++ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + K G K+ + C+NC K GH+ ++C +KF+ +
Sbjct: 249 PHEDNTNQRGENSSRGRGK-GHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFE---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 679 bits (1752), Expect = 0.0
Identities = 376/996 (37%), Positives = 569/996 (56%), Gaps = 40/996 (4%)
Query: 673 INNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINFS 732
I NV+LV GL+ NLLS+ Q +GY V F C + + + K I N + + +KI S
Sbjct: 381 IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEI-MNIEMTDKSFKIKLS 439
Query: 733 DLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQK 792
+ ++ + + + WHKRLGH + + + ++ +LV GLP + C AC
Sbjct: 440 SVEEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNL 495
Query: 793 GKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKS 852
GK + SF + T LE++H D+ GP+ S+ GS+Y ++ +DDY+ WV F+K
Sbjct: 496 GKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQ 555
Query: 853 KDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQ 912
K F F ++ + I +R P E+FCE GI + + P +PQQ
Sbjct: 556 KSETFATFKKFKALVEKQSNCSIKTLR----------PMEVFCEDEGINRQVTLPYSPQQ 605
Query: 913 NGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEX-TAYELFKG 971
NG ERKNR+L EMAR+M+ E +L WAEAV TS Y+QNR+ + + + T E + G
Sbjct: 606 NGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCG 665
Query: 972 RRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESM 1031
+PN+S+ G Y+ +KL+AKA+ GI GYS ++K YRV+ E + VE S
Sbjct: 666 HKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSR 725
Query: 1032 HVKF--DDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAES 1089
V F D + K E ++ + + S Q + S ++++ + +
Sbjct: 726 DVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQID---------DHAN 776
Query: 1090 NSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEE 1149
N E E S V ++ ++ ++ ++ PK K+KS +E++ + +PR Q
Sbjct: 777 NGEGETSSHVLSQVNDQEERETSES---PK-KYKSM--KEIL---EKAPRMENDEAAQGI 827
Query: 1150 SLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRN 1209
L++ EP+T +EA D W AM EE+ ++N W LV KP +KN+I KW+++
Sbjct: 828 EAC-LVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKI 886
Query: 1210 KLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDV 1269
K + G ++KARLVA+G+SQ+ GIDY ETFAPV+R + IR LL+YA LYQMDV
Sbjct: 887 KTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDV 946
Query: 1270 KSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDF 1329
KSAFLNG +EEEVYV QPPGF + V +L K+LYGLKQAPRAWY+R+ ++ I+N F
Sbjct: 947 KSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGF 1006
Query: 1330 ERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFF 1389
R D L+ + +D+LIV +YVDD+I N L F K M+DEFEM+ +G L +F
Sbjct: 1007 ARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYF 1066
Query: 1390 LGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLS--KEDTGTVVDQKL 1447
LG+++NQ G+++ Q KY +L+ KF +++ K ++TP+ P + D D
Sbjct: 1067 LGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTK 1126
Query: 1448 YRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKS 1507
YR ++G LLYL ASRPD++++ +R+ S P H KR+ RY+KGT+N G+L+
Sbjct: 1127 YRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSK 1186
Query: 1508 LDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASC 1567
+L+G+ D+D+ G ++KST+G LG + W S +Q T+A STAEAEYI+ +
Sbjct: 1187 ETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAA 1246
Query: 1568 CTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQK 1626
Q +W++ ED+ + IPI CDN +AI + +NP+ H R KHIEIK+HF+R K
Sbjct: 1247 TNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHK 1306
Query: 1627 GILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
G++ +++ E Q AD+ TK LSV RFE +++ L +
Sbjct: 1307 GLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
Score = 82.0 bits (201), Expect = 3e-15
Identities = 64/298 (21%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHH 96
D E++ +W M + +LW ++E+GV + E R T ++ +
Sbjct: 13 DGEKYDFWSIKMATIFR--TRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTNDTM 70
Query: 97 KIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMED 156
++ I+ ++ + +++ S++K + L ++GS +V+ K L +YE +M D
Sbjct: 71 ALQ-ILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYD 129
Query: 157 DESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSV 216
+++I+ + L L + + + KIL SLP+++ V+ +E+ +DL+ L++
Sbjct: 130 NDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTM 189
Query: 217 EDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQS 276
+L+ LK E + E S K + + SKG+ ES + + ++ +Q
Sbjct: 190 SELLGILKAQEARVTAREESTKEGAFYVRSKGR-----------ESGFKQDNTNNRVNQD 238
Query: 277 VKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEK 334
K ++ ++ + K + +K+ + K C+ C K GH+ +C KE+
Sbjct: 239 KKWCGFHKSSKH-TEEECREKPKNDDHGKNKRSNIK-CYKCGKIGHYANECRSKNKER 294
>At3g60170 putative protein
Length = 1339
Score = 676 bits (1743), Expect = 0.0
Identities = 379/1030 (36%), Positives = 584/1030 (55%), Gaps = 51/1030 (4%)
Query: 662 RKSTIGNSSISIN---------NVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKD 712
R S +G S+ + V+ V L++NLLS+ Q + G + C + +
Sbjct: 335 RMSVVGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPS 394
Query: 713 DKSITFNGKRVENVYKINFSDLADQKVVCLLS---MNDKKWVWHKRLGHANWRLISKISK 769
+I ++ + + + +CL + M+ + +WH R GH N + ++
Sbjct: 395 KGAIMETNMSGNRMFFL-LASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAH 453
Query: 770 LQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLY 829
++V GLP + + +C C GK + S K +S L+L+H D+ GP+ S
Sbjct: 454 KKMVIGLPILKATKE-ICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHS 512
Query: 830 GSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENE 889
G +Y L +DD++R TWV F+ K A F F ++ E + +R+D GGEF +
Sbjct: 513 GKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSN 572
Query: 890 PFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSC 949
F FC HGI + ++ TPQQNGV ERKNRT+ R+M+ E + K FW+EA S
Sbjct: 573 EFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSV 632
Query: 950 YIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXG 1009
+IQNR + T E + GR+P + F GC Y+ KL+ K+++ +F G
Sbjct: 633 HIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLG 692
Query: 1010 YSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDS 1069
SE SKA+R+Y+ + + S V FD+ + E+ T + D D
Sbjct: 693 VSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGD-------EDD 745
Query: 1070 EKYTEVESCPEAEITPE---AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFK--HKS 1124
EK +EV P A +P +++N + P + + S T++ P + +++
Sbjct: 746 EKNSEVVE-PIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYET 804
Query: 1125 SHPEELIIGSKDSPRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEEL 1180
EE+ EE+L +L ++ +P ++A+ D W AM+ E+
Sbjct: 805 GEGEEI-----------------EENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEI 847
Query: 1181 NQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1240
+N+ W+L P IG KWV++ KLNE GEV + KARLVA+GY+Q GIDYTE
Sbjct: 848 ESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEV 907
Query: 1241 FAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVY 1300
FAPVARL+ +R +L+ + ++Q+DVKSAFL+G ++EEVYV+QP GF + VY
Sbjct: 908 FAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVY 967
Query: 1301 KLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFG 1360
KL+K+LYGLKQAPRAWY R+ + +K +FER + TLF +T +ILIV +YVDD+IF
Sbjct: 968 KLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFT 1027
Query: 1361 STNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLED 1420
++ ++C EF K M EFEMS +G++K FLGI++ QS G+++ Q +Y +E+L +F +++
Sbjct: 1028 GSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDE 1087
Query: 1421 CKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPR 1480
+ P+ P L+K++ G VD+ +++ ++GSL+YLT +RPD+++ VCL +RF S+PR
Sbjct: 1088 SNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPR 1147
Query: 1481 ESHLTAVKRIFRYLKGTTNLGLLY--RKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLG 1538
SH A KRI RYLKGT LG+ Y RK+ KL+ F D+DYAGD +R+STSG +
Sbjct: 1148 MSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMA 1207
Query: 1539 ENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIP-IYCDNTAA 1597
I WASK+Q +A+ST EAEYI+AA C Q +W++ LE S I CDN++
Sbjct: 1208 SGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSST 1267
Query: 1598 ICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIK 1657
I LSK+P+LH ++KHIE++ H++R+ V ++ +++ TE Q ADIFTKPL +E+FE ++
Sbjct: 1268 IQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLR 1327
Query: 1658 KNLNMHFVSD 1667
L M +S+
Sbjct: 1328 ALLGMVNMSE 1337
Score = 107 bits (267), Expect = 6e-23
Identities = 77/301 (25%), Positives = 137/301 (44%), Gaps = 43/301 (14%)
Query: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
P+F+G + +W M +F+ ELW ++E+G+ + + + +R A ++
Sbjct: 13 PRFDG---YYDFWSMTMENFLRS--RELWRLVEEGIPAIVVGTTPVSEAQR---SAVEEA 64
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
K K++ + +I R + DKST+KA++ S+ ++GS KVK A+ L ++EL
Sbjct: 65 KLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFEL 124
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
M++ E I+ R T+V+ ++ + S VSKILRSL ++ V +IEE+ DL
Sbjct: 125 LAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDL 184
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+TLS+++L SL VHE LN H +++ + + + ++ S
Sbjct: 185 STLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGR-------- 236
Query: 272 DEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQ 331
RG ++ C+ C GHF +CP+ +
Sbjct: 237 ---------------------------GRGRGRSGTNRAIVECYKCHNLGHFQYECPEWE 269
Query: 332 K 332
K
Sbjct: 270 K 270
>At3g25450 hypothetical protein
Length = 1343
Score = 617 bits (1590), Expect = e-176
Identities = 343/1002 (34%), Positives = 564/1002 (56%), Gaps = 34/1002 (3%)
Query: 675 NVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINFSDL 734
+V+ + LK N+LS+ Q ++G D+ + TL +++ + + +YK++ ++
Sbjct: 350 DVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKVSL-EV 408
Query: 735 ADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGK 794
+ K + L + N+ +WH RLGH ++ I + K +LV G+ + CG+C GK
Sbjct: 409 ENSKCLQLTTTNEST-IWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFGK 467
Query: 795 IVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 854
+ SF ++ LEL+H DL GP++ ++ +Y V++DD+SR+ W +K K
Sbjct: 468 QARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEKS 527
Query: 855 YACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNG 914
A F F ++ E I R+D GGEF + F+ FC K GI ++P TPQQNG
Sbjct: 528 EAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNG 587
Query: 915 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKGRRP 974
VVER+NRTL M R+++ N+ + W EAV S Y+ NR+ R + T YE+FK ++P
Sbjct: 588 VVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKP 647
Query: 975 NISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESMHVK 1034
N+ + GC Y LKKL+ +++ ++ G SKAYR+ + + + S V
Sbjct: 648 NVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVV 707
Query: 1035 FDDREPG--SKTSEQSESNAGT-TDSEDASESDQPSDSEKYTEVESCPEAEITPEAESN- 1090
FD+ ++S +++ +GT T + ++ ++++ TE E EAEI E E+
Sbjct: 708 FDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENII 767
Query: 1091 SEAEPSPKVQNESASEDFQDNTQQVIQPKFKHK-----SSHPEELIIGSKDSPRRTRSHF 1145
EAE Q++ + + + +QVI+P + E L++ D
Sbjct: 768 EEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND--------- 818
Query: 1146 RQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKW 1205
EP +EA W A +EE+ ++N W LV P IG KW
Sbjct: 819 -------------EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKW 865
Query: 1206 VFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILY 1265
VF+ K N G + + KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+++ A ++G ++
Sbjct: 866 VFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIH 925
Query: 1266 QMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLI 1325
+DVK+AFL+G + E+VYV QP GF + + + VYKL K+LYGL+QAPRAW +L+ L
Sbjct: 926 HLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILK 985
Query: 1326 KNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGE 1385
+ FE+ + +L+R+ ++IL+V +YVDD++ +N + F K M +FEMS +G+
Sbjct: 986 ELKFEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGK 1045
Query: 1386 LKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQ 1445
L ++LGI++ QSK+G+ + Q +Y K++L++ + C +NTPM + LSK +D+
Sbjct: 1046 LTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDE 1105
Query: 1446 KLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1505
YR IG L YL +RPD+ ++V + +R+ +PRESH A+K+I RYL+GTT+ GL ++
Sbjct: 1106 TDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFK 1165
Query: 1506 KSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAA 1565
K + LIG+ D+ + D + KST G+ +L + I+W S++Q + +S+ EAE+++A
Sbjct: 1166 KGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAAT 1225
Query: 1566 SCCTQLLWMKHQL-EDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYV 1624
Q +W++ L E + I DN +AI L+KNP+ H R+KHI ++HFIR V
Sbjct: 1226 EAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECV 1285
Query: 1625 QKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNMHFVS 1666
+ G ++++ + Q ADI TK L +F +++ + + VS
Sbjct: 1286 ENGQIEVEHVPGVRQKADILTKALGKIKFLEMRELIGVQGVS 1327
Score = 70.1 bits (170), Expect = 1e-11
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 19/219 (8%)
Query: 93 KKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELF 152
+K+ R ++ SIP + +++ + T+ A++ ++ + G+++VKEA+ L+ +++
Sbjct: 58 EKNDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKL 117
Query: 153 RMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDL 211
+M+D E+I++ R + + L + S V K L+SLP ++ V A+E+ DL
Sbjct: 118 KMKDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDL 177
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
T + ED+ +K +E + + + S + +GK+ +E EEE D
Sbjct: 178 KTTTFEDIAGRIKTYEDRVWDDDDSHE-------DQGKL--------MTEVEEEVVDDLE 222
Query: 272 DEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKED 310
+E++ V + K + R K R + K+ED
Sbjct: 223 EEEEEVINKEIKAKSHVIDRLLKLI---RLQEQKEKEED 258
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 569 bits (1467), Expect = e-162
Identities = 338/1016 (33%), Positives = 541/1016 (52%), Gaps = 40/1016 (3%)
Query: 652 PLSIHPKVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFC-DNGYDVTFSKTNCTLVN 710
P + ++ G + + N I + NV + + NL+SIS D G V F + C + +
Sbjct: 473 PTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQD 532
Query: 711 KDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKL 770
GKR+ N+Y ++ A + + ++ D VWHKRLGH ++ S++ L
Sbjct: 533 LTKGLTLGEGKRIGNLYVLDTQSPA----ISVNAVVDVS-VWHKRLGHPSF---SRLDSL 584
Query: 771 QLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYG 830
V G A C C K K SF S + + S ELLHID++GP + ++ G
Sbjct: 585 SEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNST-FELLHIDVWGPFSVETVEG 643
Query: 831 SKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEP 890
KY L IVDD+SR TW+ +KSK VF +F ++ + + ++ VRSD+ E
Sbjct: 644 YKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA--- 700
Query: 891 FELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCY 950
F F + GI+ S P TP+QN VVERK++ + +AR ++ ++N++ +W + V T+ +
Sbjct: 701 FTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVF 760
Query: 951 IQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGY 1010
+ NR + T +E+ G+ P+ S GC Y + K +++ +F GY
Sbjct: 761 LINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGY 820
Query: 1011 SERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSE 1070
K Y++ + E+ V S +V+F + +S+QS TT S+ + D S
Sbjct: 821 PFGFKGYKLLDLESNVVHISRNVEFHEELFPLASSQQS----ATTASDVFTPMDPLSSGN 876
Query: 1071 KYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEEL 1130
T P+ PS ++ ++ F + Q SHP
Sbjct: 877 SITSHLPSPQIS------------PSTQISKRRITK-FPAHLQDYHCYFVNKDDSHP--- 920
Query: 1131 IIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWD 1190
I S + + SH + + I P++ EA W A+ +E+ +R D W+
Sbjct: 921 ISSSLSYSQISPSHMLY---INNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWE 977
Query: 1191 LVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAI 1250
+ P K +G KWVF K + G + R KAR+VA+GY+Q+EG+DYTETF+PVA++ +
Sbjct: 978 ITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATV 1037
Query: 1251 RLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKH----PDHVYKLKKSL 1306
+LLL + + L Q+D+ +AFLNG +EE +Y+K P G+ D+K P+ V +LKKS+
Sbjct: 1038 KLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSI 1097
Query: 1307 YGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASL 1366
YGLKQA R W+ + SN L+ FE+ D TLF R + + +++ +YVDDI+ ST
Sbjct: 1098 YGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQA 1157
Query: 1367 CKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNT 1426
+ ++ ++ F++ +G LK+FLG+++ ++ EG+ + Q KY ELL + DCK +
Sbjct: 1158 AQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSI 1217
Query: 1427 PMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTA 1486
PM P LSK D + D+++YR ++G L+YLT +RPDI F+V +F S PR +HL A
Sbjct: 1218 PMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAA 1277
Query: 1487 VKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWAS 1546
V ++ +Y+KGT GL Y D L G+ DAD+ R+ST+G F+G +LISW S
Sbjct: 1278 VYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRS 1337
Query: 1547 KRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPIL 1606
K+Q T++ S+AEAEY + A ++ W+ L ++++ +Y D+TAA+ ++ NP+
Sbjct: 1338 KKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVF 1397
Query: 1607 HSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
H R KHIEI H +R + G L + + T+ Q ADI TKPL +F + +++
Sbjct: 1398 HERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSI 1453
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 567 bits (1460), Expect = e-161
Identities = 340/1017 (33%), Positives = 536/1017 (52%), Gaps = 50/1017 (4%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFNGKRVENV 726
N I +N V +V ++ +LLS+S+ CD+ V F +++ + + G R +
Sbjct: 373 NGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGL 432
Query: 727 YKINFSDLADQKVVCLLSMND---KKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHS 783
Y L +Q+ V L S + VWH RLGHAN + + LQ K + +
Sbjct: 433 YV-----LENQEFVALYSNRQCAATEEVWHHRLGHANSKALQH---LQNSKAIQINKSRT 484
Query: 784 DALCGACQKGKIVKSSFKSKDIVSTSR---PLELLHIDLFGPVNTASLYGSKYGLVIVDD 840
+C CQ GK + F ++S SR PL+ +H DL+GP S G KY + VDD
Sbjct: 485 SPVCEPCQMGKSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDD 540
Query: 841 YSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGI 900
YSR++W + +K VF SF ++ + KI +SD GGEF + + +HGI
Sbjct: 541 YSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGI 600
Query: 901 LHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPM 960
H S P TPQQNG+ ERK+R L E+ +M+ ++ + FW E+ T+ YI NR+ +
Sbjct: 601 HHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVL 660
Query: 961 XEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVY 1020
+ YE G +P+ S+ G Y K + ++ + +F GY+ + K YR +
Sbjct: 661 KNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCF 720
Query: 1021 NSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPE 1080
T V S +V F++ E K QS +T A + ++ S+ V + P
Sbjct: 721 YPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISE----ISVPAAPV 776
Query: 1081 AEITPEAESNSEA---------EPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELI 1131
+ + N+ A +P P NE + E+ +++ + +E +
Sbjct: 777 QLFSKPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEI---------AANQEQV 827
Query: 1132 IGSKDSPRRTRSHFRQEESLIGLLS----IIEPKTVEEALSDDGWILAMQEELNQFQRND 1187
I S R+++ ++ + L++ EPKT+ A+ GW A+ EE+N+
Sbjct: 828 INSHAMTTRSKAGIQKPNTRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLH 887
Query: 1188 VWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARL 1247
W LVP NI+ +KWVF+ KL+ G + + KARLVA+G+ Q+EG+DY ETF+PV R
Sbjct: 888 TWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRT 947
Query: 1248 EAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLY 1307
IRL+L + + G + Q+DV +AFL+G ++E V++ QP GF D + P HV +L K++Y
Sbjct: 948 ATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIY 1007
Query: 1308 GLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLC 1367
GLKQAPRAW+D SNFL+ F + D +LF IL + +YVDDI+ ++ SL
Sbjct: 1008 GLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLL 1067
Query: 1368 KEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTP 1427
++ + +++ F M +G ++FLGIQI G+++HQT Y ++L++ + DC M TP
Sbjct: 1068 EDLLQALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTP 1127
Query: 1428 MHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAV 1487
+ L ++ + +R + G L YLT +RPDI F+V + P S +
Sbjct: 1128 LPQ--QLDNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLL 1185
Query: 1488 KRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASK 1547
KRI RY+KGT +GL +++ L + D+D+AG + R+ST+G C LG NLISW++K
Sbjct: 1186 KRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAK 1245
Query: 1548 RQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIP--IYCDNTAAICLSKNPI 1605
RQ T++ S+ EAEY + ++ W+ L D I +P +YCDN +A+ LS NP
Sbjct: 1246 RQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGI-PQYLPTQVYCDNLSAVYLSANPA 1304
Query: 1606 LHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
LH+R+KH + +H+IR V G+++ Q I Q AD+FTK L F ++ L +
Sbjct: 1305 LHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 563 bits (1451), Expect = e-160
Identities = 329/1013 (32%), Positives = 547/1013 (53%), Gaps = 65/1013 (6%)
Query: 665 TIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVE 724
T G ++ +V+ + LK N++S+ Q + G DV TL +++ + +
Sbjct: 328 TKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRN 387
Query: 725 NVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSD 784
+YK+ DL + V CL +L A + + +LV G+ NI +
Sbjct: 388 RLYKV---DLNVENVKCL------------QLEAAT------MVRKELVIGISNIPKEKE 426
Query: 785 ALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRW 844
CG+C GK + F S+ LEL+H DL GP+ ++ +Y LV++DD++R+
Sbjct: 427 T-CGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRY 485
Query: 845 TWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEF 904
W +K K A E F F T+++ E +KI R+D GGEF ++ F+ FC K GI
Sbjct: 486 MWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHL 545
Query: 905 SSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXT 964
++P TPQQNGVVER+NRTL M R+++ + + W EAV S YI NR+ R + T
Sbjct: 546 TAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQT 605
Query: 965 AYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVY---- 1020
YE+FK R+PN+ + GC Y +L+KL+ +++ ++ G SKAYR+
Sbjct: 606 PYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTN 665
Query: 1021 -------NSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYT 1073
NS+++ + S E G+ ++S+ + E++ S + ++
Sbjct: 666 RKIIKWNNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHN 725
Query: 1074 EVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIG 1133
E E E P S A P P ++ +T+QV +P + ++ ++
Sbjct: 726 EQEQIDAEETQP-----SHATPLPTLRR---------STRQVGKPNYL------DDYVL- 764
Query: 1134 SKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVP 1193
+ E+ L+ + EP +EA W A +EE+ ++N W L+
Sbjct: 765 --------MAEIEGEQVLLAIND--EPWDFKEANKLKEWRDACKEEILSIEKNKTWSLID 814
Query: 1194 KPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLL 1253
P ++ +IG KWVF+ K N G + + KARLVA+GY Q+ GIDY E FA VAR+E IR++
Sbjct: 815 LPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVI 874
Query: 1254 LSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAP 1313
++ A ++G ++ +DVK+AFL+G + E+VYV QP GF + + VYKL K+LYGLKQAP
Sbjct: 875 IALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAP 934
Query: 1314 RAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKL 1373
RAW +L+ L + +F + + +++RR +K +LIV IYVDD++ ++ L F K
Sbjct: 935 RAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKD 994
Query: 1374 MQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCT 1433
M +FEMS +G+L ++LGI++ K G+ + Q +Y +++++ + +C + PM
Sbjct: 995 MAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLE 1054
Query: 1434 LSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRY 1493
L K + ++ YR MIG L Y+ +RPD+ + V + +R+ PRESH A+K++ RY
Sbjct: 1055 LCKAQEEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRY 1114
Query: 1494 LKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIA 1553
LKGT + GL ++ L+G+ D+ ++ D + KST+G+ +L + I+W S++Q +A
Sbjct: 1115 LKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVA 1174
Query: 1554 MSTAEAEYISAASCCTQLLWMKHQL-EDYQINANSIPIYCDNTAAICLSKNPILHSRAKH 1612
+S+ EAE+++A Q +W++ E + + I DN +AI L+KN + H R+KH
Sbjct: 1175 LSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKH 1234
Query: 1613 IEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNMHFV 1665
I ++HFIR V+ ++++ + Q ADI TKPL +F +++ + + V
Sbjct: 1235 IHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKFREMRELVGVQCV 1287
Score = 85.5 bits (210), Expect = 2e-16
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 54/288 (18%)
Query: 58 ELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDK 117
++W+ ++ G DD++ K+ R ++ S+P + +++
Sbjct: 9 KVWETIDPGSDDME----------------------KNDMARALLFQSVPESTILQVGKH 46
Query: 118 STAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEMYSRFQTLVSGLQIL 177
T+KAM+ ++ G+++VKEAK L+ +++ M+D+E+I+E R + + + L
Sbjct: 47 KTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESL 106
Query: 178 KKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETS 236
+ S V K L+SLP ++ + A+E+ DLNT ED+V +K +E + + + S
Sbjct: 107 GEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDDS 166
Query: 237 KKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKF 296
+ +GK+ Y SES ++ G + +
Sbjct: 167 PE-------EQGKL-----MYANSESSYDTRGGRG------------------RGRGRSS 196
Query: 297 LSKRGSYKNSKKEDQKG-CFNCKKPGHFIADCPDLQKEKFKGKSKKSS 343
RG Y +++ K C+ C K GH+ ++C D + K + ++ +
Sbjct: 197 GRGRGGYGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQN 244
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 560 bits (1443), Expect = e-159
Identities = 309/842 (36%), Positives = 459/842 (53%), Gaps = 68/842 (8%)
Query: 673 INNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINF- 731
I+NV+ + +K N+LS+ Q + GYD+ N ++ +K+ IT ++ +N
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIR 450
Query: 732 SDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQ 791
+D+A +C ++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C
Sbjct: 451 NDIAQCLKMCY---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCL 506
Query: 792 KGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIK 851
G K SF + +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K
Sbjct: 507 LGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLK 566
Query: 852 SKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQ 911
K E+F F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQ
Sbjct: 567 EKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQ 626
Query: 912 QNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKG 971
QNGV ERKNRT+ EMAR+M+ L K WAEAV + Y+ NR + + T E + G
Sbjct: 627 QNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSG 686
Query: 972 RRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESM 1031
R+P +S+ G + + KL+ K+++ IF GY SK Y++YN +T+ S
Sbjct: 687 RKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISR 746
Query: 1032 HVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAESNS 1091
++ FD+ S + + N ED E P+ E +E + P T S
Sbjct: 747 NIVFDEEGEWDWNSNEEDYNFFPHFEEDKPE---PTREEPPSEEPTTPPTSPTSSQIEES 803
Query: 1092 EAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESL 1151
+E +P+ ++ + +N + + +L
Sbjct: 804 SSERTPRFRSIQELYEVTENQENL----------------------------------TL 829
Query: 1152 IGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKL 1211
L + EP +EA+ W AM EE+ Q+ND W+L P+ IG KWV++ K
Sbjct: 830 FCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKK 889
Query: 1212 NEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKS 1271
N +GEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDVKS
Sbjct: 890 NSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKS 949
Query: 1272 AFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFER 1331
AFLNG +EEEVY++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF +
Sbjct: 950 AFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIK 1009
Query: 1332 GQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLG 1391
+ L+ + K+DILI +YVDD+IF N S+ +EF K M EFEM+ +G + ++LG
Sbjct: 1010 CPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLG 1069
Query: 1392 IQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGM 1451
I++ Q G+++ Q Y KE+LKKFK++D +
Sbjct: 1070 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSN--------------------------PSL 1103
Query: 1452 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1511
+GSL YLT +RPDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYK
Sbjct: 1104 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1163
Query: 1512 LI 1513
L+
Sbjct: 1164 LV 1165
Score = 81.3 bits (199), Expect = 4e-15
Identities = 71/327 (21%), Positives = 148/327 (44%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +M++ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + K G K+ + C+NC K GH+ ++C +KFK +
Sbjct: 249 PHEDNTNQRGENSSRGRGK-GHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFK---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At1g70010 hypothetical protein
Length = 1315
Score = 555 bits (1431), Expect = e-158
Identities = 345/1005 (34%), Positives = 535/1005 (52%), Gaps = 54/1005 (5%)
Query: 673 INNVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINF 731
+N+V + K NLLS+S + G + F +T+C L + + + GK+V N+Y ++
Sbjct: 325 LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDL 384
Query: 732 SDLA----DQKV-VCLLSMNDKKWVWHKRLGHANWRLISKISKL-QLVKGLPNIDYHSDA 785
L+ D + V ++ +D +WHKRLGH + + + +S L K N D+H
Sbjct: 385 DSLSHPGTDSSITVASVTSHD---LWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFH--- 438
Query: 786 LCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWT 845
C C K F S + S SRP +L+HID +GP + + G +Y L IVDDYSR T
Sbjct: 439 -CRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRAT 496
Query: 846 WVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFS 905
WV +++K V +F T ++ + E I VRSD+ E F F GI+ S
Sbjct: 497 WVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKGIVPYHS 553
Query: 906 SPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTA 965
P TPQQN VVERK++ + +AR++ ++++ +W + + T+ Y+ NR+ + +
Sbjct: 554 CPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCP 613
Query: 966 YELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQ 1025
+E+ P + GC Y + K + +A+ F GY K Y++ + ET
Sbjct: 614 FEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETH 673
Query: 1026 CVEESMHVKFDDRE---PGSKTSEQSES---NAGTTDSEDASESDQPSDSEKYTEVESCP 1079
+ S HV F + GS S++ ++ + T SD + S+ + VE P
Sbjct: 674 SIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVEILP 733
Query: 1080 EAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHK--SSHPEELIIGSKDS 1137
A T N+ EPS + + A + +Q + H SS P E+
Sbjct: 734 SANPT-----NNVPEPSVQTSHRKAKKP------AYLQDYYCHSVVSSTPHEI------- 775
Query: 1138 PRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVP 1193
R+ S+ R + + L+ + EP EA W AM E + + W++
Sbjct: 776 -RKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCS 834
Query: 1194 KPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLL 1253
P+ K IG +W+F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA+L +++LL
Sbjct: 835 LPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLL 894
Query: 1254 LSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFE----DLKHPDHVYKLKKSLYGL 1309
L A + L Q+D+ +AFLNG ++EE+Y++ P G+ D P+ V +LKKSLYGL
Sbjct: 895 LGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGL 954
Query: 1310 KQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKE 1369
KQA R WY + S+ L+ F + D T F + L V +Y+DDII S N +
Sbjct: 955 KQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDI 1014
Query: 1370 FSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMH 1429
M+ F++ +GELK+FLG++I +S +G+++ Q KY +LL + CK + PM
Sbjct: 1015 LKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMD 1074
Query: 1430 PTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKR 1489
P+ + + G V+ YR +IG L+YL +RPDI F+V A+F PR++HL AV +
Sbjct: 1075 PSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYK 1134
Query: 1490 IFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQ 1549
I +Y+KGT GL Y + + +L + +ADY R R+STSG C FLG++LI W S++Q
Sbjct: 1135 ILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQ 1194
Query: 1550 ATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHS 1608
++ S+AEAEY S + +L+W+ + L++ Q+ + ++CDN AAI ++ N + H
Sbjct: 1195 DVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHE 1254
Query: 1609 RAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1653
R KHIE H +R + KG+ ++ I+TE Q AD FTKPL F
Sbjct: 1255 RTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHF 1299
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 551 bits (1419), Expect = e-156
Identities = 337/1017 (33%), Positives = 542/1017 (53%), Gaps = 50/1017 (4%)
Query: 658 KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSI 716
K+ G + N I + NV + + NL+SIS D+ G V F K +C + + +
Sbjct: 468 KISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRM 527
Query: 717 TFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGL 776
G+RV N+Y + D+ DQ + ++ +WH+RLGHA+ + + IS G
Sbjct: 528 LGQGRRVANLYLL---DVGDQSISVNAVVDIS--MWHRRLGHASLQRLDAISDSL---GT 579
Query: 777 PNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLV 836
C C K K SF + + V +LLHID++GP + ++ G KY L
Sbjct: 580 TRHKNKGSDFCHVCHLAKQRKLSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLT 638
Query: 837 IVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCE 896
IVDD+SR TW+ +K+K VF +F Q++ + ++K+ VRSD+ E + F F
Sbjct: 639 IVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELK---FTSFYA 695
Query: 897 KHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIY 956
+ GI+ S P TP+QN VVERK++ + +AR ++ ++ + W + V T+ ++ NR
Sbjct: 696 EKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTP 755
Query: 957 IRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKA 1016
+ + T YE+ G P GC Y + K +++ +F GY K
Sbjct: 756 SQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKG 815
Query: 1017 YRVYNSETQCVEESMHVKFDD------REPGSKTSEQSESNAGTTDSEDASESDQPSDSE 1070
Y++ + E+ V S +V+F + + PGS++S + + S S++ S S
Sbjct: 816 YKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTH-SPSS 874
Query: 1071 KYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEEL 1130
+++ P P+ S +P + D+ NT Q HK +P
Sbjct: 875 LPSQISDLP-----PQISSQRVRKPPAHLN------DYHCNTMQS-----DHK--YPISS 916
Query: 1131 IIG-SKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVW 1189
I SK SP SH + + I P EA W A+ E+ ++ + W
Sbjct: 917 TISYSKISP----SHMCY---INNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTW 969
Query: 1190 DLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEA 1249
++ P K +G KWVF K G + R KARLVA+GY+Q+EG+DYT+TF+PVA++
Sbjct: 970 EITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTT 1029
Query: 1250 IRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKH----PDHVYKLKKS 1305
I+LLL + + L Q+DV +AFLNG +EEE+++K P G+ + K + V +LK+S
Sbjct: 1030 IKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRS 1089
Query: 1306 LYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNAS 1365
+YGLKQA R W+ + S+ L+ F++ D TLF + + +IV +YVDDI+ ST+ +
Sbjct: 1090 IYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEA 1149
Query: 1366 LCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMN 1425
+ ++ + F++ +G+LK+FLG+++ ++ G+ + Q KY ELL+ + CK ++
Sbjct: 1150 AAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACKPVS 1209
Query: 1426 TPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLT 1485
PM P + K+D + D + YR ++G L+YLT +RPDI F+V +F S PR +HLT
Sbjct: 1210 VPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLT 1269
Query: 1486 AVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWA 1545
A R+ +Y+KGT GL Y S D L GF D+D+A + R+ST+ F+G++LISW
Sbjct: 1270 AAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLISWR 1329
Query: 1546 SKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPI 1605
SK+Q T++ S+AEAEY + A +++W+ L Q + +Y D+TAAI ++ NP+
Sbjct: 1330 SKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPILYSDSTAAIYIATNPV 1389
Query: 1606 LHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
H R KHI++ H +R + G L + + TE Q ADI TKPL +FE +K +++
Sbjct: 1390 FHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSI 1446
>At1g37110
Length = 1356
Score = 525 bits (1352), Expect = e-149
Identities = 337/1043 (32%), Positives = 544/1043 (51%), Gaps = 83/1043 (7%)
Query: 654 SIHPKVQG--RKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGY-------DVTFSKT 704
S+ + QG R T G + + NV V L+ NL+S GY V + K
Sbjct: 343 SVESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKN 402
Query: 705 NCTLVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKW-VWHKRLGHANWRL 763
N T + G +Y ++ S + + +C + K +WH RLGH +
Sbjct: 403 NKTALR---------GSLSNGLYVLDGSTVMSE--LCNAETDKVKTALWHSRLGHMSMNN 451
Query: 764 ISKISKLQLV--KGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG 821
+ ++ L+ K + +++ C C GK K SF S L +H DL+G
Sbjct: 452 LKVLAGKGLIDRKEINELEF-----CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWG 505
Query: 822 PVN-TASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRS 880
N T S+ G +Y L I+DD +R W+ F+KSKD + F + + ++ + K+ +R+
Sbjct: 506 SPNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRT 565
Query: 881 DHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHF 940
D+G EF N F+ +C++HGI + TPQQNGV ER NRT+ E R +++++ + + F
Sbjct: 566 DNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVF 625
Query: 941 WAEAVNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNA 1000
WAEA T+ Y+ NR + E++ R+P + + G Y+ + KL
Sbjct: 626 WAEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQG---KLKP 682
Query: 1001 KAQRGIFXGYSERSKAYRVYN-SETQCV-------EES-----MHVKFDDREPGSK---T 1044
+A +G F GY +K Y+V+ E +CV +ES + VK DD + ++ T
Sbjct: 683 RALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETT 742
Query: 1045 SEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESA 1104
S + E N S SDSE TE E ++E E E + + + +PK +
Sbjct: 743 SSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDSE--EEVEYSEKTQETPKRTGLTT 800
Query: 1105 SEDFQDNTQQVIQP--KFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKT 1162
+ +D ++ I P +F +SS L++ E+ I + EP++
Sbjct: 801 YKLARDRVRRNINPPTRFTEESSVTFALVV---------------VENCI----VQEPQS 841
Query: 1163 VEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQG-EVT 1218
+EA+ + W +A +E++ +N WDLV KP + IIG +W+F+ K G E T
Sbjct: 842 YQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPT 901
Query: 1219 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVV 1278
R KARLVA+GY+Q+EG+DY E FAPV + +IR+L+S ++ + L QMDVK+ FL+G +
Sbjct: 902 RFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDL 961
Query: 1279 EEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL 1338
EEE+Y++QP GF + V +LKKSLYGLKQ+PR W R F+ F R + D +
Sbjct: 962 EEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACV 1021
Query: 1339 F-RRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQS 1397
+ + + D + + +YVDD++ + + + + EFEM MG LGI I +
Sbjct: 1022 YVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRD 1081
Query: 1398 KEG--VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLS---KEDTGTVVDQKLYRGMI 1452
++G + + Q Y +++L +F + K+ N P+ L+ +ED D Y +
Sbjct: 1082 RKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAV 1141
Query: 1453 GSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1511
GS++Y + +RPD+ +++CL +R+ S P H AVK + RYLKG +L L++ K D+
Sbjct: 1142 GSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFT 1201
Query: 1512 LIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1571
+ G+CD++YA D R+S SG +G N +SW + Q +AMST EAEYI+ A +
Sbjct: 1202 VTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEA 1261
Query: 1572 LWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDI 1631
+W+K L+D + + + I+CD+ +AICLSKN + H R KHI+++ ++IR+ V+ G +D+
Sbjct: 1262 MWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDV 1321
Query: 1632 QFIDTEHQWADIFTKPLSVERFE 1654
I T D TK + V +F+
Sbjct: 1322 LKIHTSRNPVDALTKCIPVNKFK 1344
>At3g45520 copia-like polyprotein
Length = 1363
Score = 520 bits (1339), Expect = e-147
Identities = 324/1005 (32%), Positives = 526/1005 (52%), Gaps = 41/1005 (4%)
Query: 670 SISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKI 729
++++ NV + + NLLS+ F G+ F N L K + G+R + +Y +
Sbjct: 369 TVTLQNVRYIPDMDRNLLSLGTFEKAGHK--FESENGMLRIKSGNQVLLEGRRYDTLYIL 426
Query: 730 NFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLV--KGLPNIDYHSDALC 787
+ D+ + + ND +WH+RL H + + +S + K + K + +D D +
Sbjct: 427 HGKPATDESLA-VARANDDTVLWHRRLCHMSQKNMSLLIKKGFLDKKKVSMLDTCEDCIY 485
Query: 788 GACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTW 846
G +K + + D T + LE +H DL+G P SL +Y + +DDY+R W
Sbjct: 486 GRAKK---IGFNLAQHD---TKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVW 539
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F+K+KD A E F S+ + ++ + ++ +R+D+G EF N F+ FCE+ G +
Sbjct: 540 VYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTC 599
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
TPQQNGVVER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ +
Sbjct: 600 AYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPD 659
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
+ + G+ P S + GC ++ KLN +A++G+ GY K Y+V+ E +
Sbjct: 660 KRWSGKAPIYSYLRRYGCVTFVHTDGG---KLNLRAKKGVLIGYPSGVKGYKVWLIEEKK 716
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEK-YTEVESCPEAEITP 1085
S +V F + ++ E + D S D +++K + +A++TP
Sbjct: 717 CVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQSQAQVTP 776
Query: 1086 EAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHF 1145
+ P P+ + + E T P H E I + PRR
Sbjct: 777 ATRGAVTSTP-PRYETDDIEE-----TDVHQSPLSYHLVRDRERREIRA---PRRFDDED 827
Query: 1146 RQEESLIGLLS--IIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKNI 1200
E+L +EP +EA+ D D W LAM EE+ +ND W V +P ++ I
Sbjct: 828 YYAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRI 887
Query: 1201 IGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAIN 1259
IG++W+++ K G E R KARLVA+GY+Q+EG+DY E FAPV + +IR+LLS
Sbjct: 888 IGSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQ 947
Query: 1260 HGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDR 1319
+ L Q+DVK+AFL+G ++E++Y+ P G E L + V L KSLYGLKQAPR W ++
Sbjct: 948 ENLELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEK 1007
Query: 1320 LSNFLIKNDFERGQVDTTLFRRTLKKD-ILIVQIYVDDIIFGSTNASLCKEFSKLMQDEF 1378
++++ + F+R D+ + + L D + + YVDD++ + N K + +F
Sbjct: 1008 FNHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKF 1067
Query: 1379 EMSMMGELKFFLGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKVMNTPM--HPTCTL 1434
EM +G K LGI+I +E +++ Q Y ++LK F + + K TP+ H
Sbjct: 1068 EMKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKS 1127
Query: 1435 SKEDTGTVVDQKL----YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKR 1489
+ E+ + ++ + Y +GS++Y + +RPD+ + V + +RF S P + H VK
Sbjct: 1128 ATEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKW 1187
Query: 1490 IFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQ 1549
+ RY+KGT + L Y+++ D+ + G+CDADYA D +R+S +G LG N ISW S Q
Sbjct: 1188 VLRYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQ 1247
Query: 1550 ATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSR 1609
+A S+ E EY+S + +W+K L+D+ ++ I+CD+ +AI LSKN + H R
Sbjct: 1248 RVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHER 1307
Query: 1610 AKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFE 1654
KHI++K HFIR + G +++ I TE ADIFTK L V +F+
Sbjct: 1308 TKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQ 1352
Score = 58.9 bits (141), Expect = 2e-08
Identities = 67/320 (20%), Positives = 127/320 (38%), Gaps = 55/320 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSFI--MGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I +GL L + + + D E + D + +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHIDMLGLSAVLRE--SETPMGKERDSEKSDEDEKEEREKMEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL----MLV 146
+K K R IV S+ K+ +++A AM +L ++ +KAL L
Sbjct: 67 FEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEAL-------DRLYMSKALPNRIYLK 119
Query: 147 HQYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIE 206
+ F+M ++ SIE F +V+ L+ L D +L SLP + ++
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
+ LS++++ +++ E+ G + KS K
Sbjct: 180 YSSGKTVLSLDEVAAAIYSRELEF-----------------GSVKKSIKG---------- 212
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+ + +K E R ++K +G K SK + ++GC+ C + GH +
Sbjct: 213 ---------QAEGLYVKDKAENRGRSEQK---DKGKGKRSKSKSKRGCWICGEDGHLKST 260
Query: 327 CPDLQKEKFKGKSKKSSFNS 346
CP+ K +FK + +S
Sbjct: 261 CPNKNKPQFKNQGSNKGESS 280
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 515 bits (1326), Expect = e-146
Identities = 327/1011 (32%), Positives = 530/1011 (52%), Gaps = 53/1011 (5%)
Query: 670 SISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKI 729
+I + NV + + NLLS+ F GY F + L K + G+R + +Y +
Sbjct: 362 TIVLTNVRYIPDMDRNLLSLGTFEKAGYK--FESEDGILRIKAGNQVLLTGRRYDTLYLL 419
Query: 730 NFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKG-LPNIDYHSDALCG 788
N+ +A + + + +D +WH+RL H + K ++ + KG L S +C
Sbjct: 420 NWKPVASESLAVVKRADDTV-LWHQRLCHMS----QKNMEILVRKGFLDKKKVSSLDVCE 474
Query: 789 ACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWV 847
C GK + SF S T LE +H DL+G P SL +Y + I+DD++R WV
Sbjct: 475 DCIYGKAKRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWV 533
Query: 848 KFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSP 907
F+K+KD A E F + ++ + + ++ +R+D+G EF N+ F+ FCE GI +
Sbjct: 534 YFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCA 593
Query: 908 RTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYE 967
TPQQNGV ER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ + +
Sbjct: 594 YTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDK 653
Query: 968 LFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCV 1027
+ G P S + GC ++ +T D KL +A++G+ GY K Y+V+ + +
Sbjct: 654 KWSGNPPVYSYLRRYGCVAFV-HTDD--GKLEPRAKKGVLIGYPVGVKGYKVWILDERKC 710
Query: 1028 EESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEIT--- 1084
S ++ F + ++ E+ + T+ +D + S D E +V S + E+
Sbjct: 711 VVSRNIIFQENAVYKDLMQRQENVS--TEEDDQTGSYLEFDLEAERDVISGGDQEMVNTI 768
Query: 1085 PEAESNSEAEPSPKVQNESASEDFQDN--TQQVIQPKFKHKSSHPEELIIGSKDSPRRTR 1142
P ES + P+ + N+ D + + +++ + K + P D
Sbjct: 769 PAPESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRF----DDEDYYAE 824
Query: 1143 SHFRQEESLIGLLSIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPSQKN 1199
+ + E+ +EP+ +A D D W LAM EE++ ++N+ W +V +P +
Sbjct: 825 ALYTTEDG-----EAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQR 879
Query: 1200 IIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAI 1258
IIG +W+F+ KL G E R KARLVA+GY+Q+EGIDY E FAPV + +IR+LLS
Sbjct: 880 IIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVA 939
Query: 1259 NHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYD 1318
+ L Q+DVK+AFL+G ++E++Y+ P G+E + + V L K+LYGLKQAP+ W +
Sbjct: 940 QEDLELEQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNE 999
Query: 1319 RLSNFLIKNDFERGQVDTTLFRRTLKK-DILIVQIYVDDIIFGSTNASLCKEFSKLMQDE 1377
+ NF+ + F + D+ + + L ++ + IYVDDI+ S N +
Sbjct: 1000 KFDNFMKEICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMR 1059
Query: 1378 FEMSMMGELKFFLGIQINQSKE-GV-YVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLS 1435
FEM +G K LG++I + + GV ++ Q Y ++L+ + + + K TP+
Sbjct: 1060 FEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQ 1119
Query: 1436 KEDTGTVVDQKL-----------YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESH 1483
+QKL Y +GS++Y + +RPD+ + V + +RF S P + H
Sbjct: 1120 -----AATEQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEH 1174
Query: 1484 LTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLIS 1543
VK + RY+KGT L Y+KS + ++G+CDADYA D +R+S +G LG N IS
Sbjct: 1175 WLGVKWVLRYIKGTLKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTIS 1234
Query: 1544 WASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKN 1603
W S Q +A ST E+EY+S + +W+K L+D+ S+ I+CD+ +AI LSKN
Sbjct: 1235 WKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKN 1294
Query: 1604 PILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFE 1654
+ H R KHI++K+HFIR + G +++ I TE ADIFTK L+V +F+
Sbjct: 1295 NVHHERTKHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKFQ 1345
Score = 59.7 bits (143), Expect = 1e-08
Identities = 65/310 (20%), Positives = 125/310 (39%), Gaps = 55/310 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I+GL+ L + G LDE + ++ +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEKLEK--FEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLVHQ 148
L +K K R IV S+ K+ +STA AM +L K+ +KAL + +
Sbjct: 67 LEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLAL-------DKLYMSKALPNRIYPK 119
Query: 149 YEL--FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIE 206
+L F+M ++ S+E F +++ L+ + D +L +LP + ++
Sbjct: 120 QKLYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
+ + L+++++ +++ E+ L + S K ++ L K K K +
Sbjct: 180 YSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGEQKG------ 233
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIAD 326
+G K K + + GC+ C + GHF +
Sbjct: 234 ---------------------------------KGKGKKGKSKKKPGCWTCGEEGHFRSS 260
Query: 327 CPDLQKEKFK 336
CP+ K +FK
Sbjct: 261 CPNQNKPQFK 270
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 514 bits (1324), Expect = e-145
Identities = 333/1066 (31%), Positives = 539/1066 (50%), Gaps = 58/1066 (5%)
Query: 640 KGVKPKVLNDQKPLSI-----HPKVQGRKSTIG-NSSISINNVWLVDGLKHNLLSISQFC 693
K + L D P+ I ++ ++ T+ S++ + +V+ V+ + +L+SI Q
Sbjct: 276 KDAATEKLTDMDPILIVLADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLM 335
Query: 694 D-NGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKW-V 751
D N + S + ++ + + G+RV + +++A V +K + +
Sbjct: 336 DENRCVLQMSDRFLVVQDRTSRMVMGAGRRVGGTFHFRSTEIAASVTV----KEEKNYEL 391
Query: 752 WHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRP 811
WH R+GH R++S I + + H + C C + K ++SF I T R
Sbjct: 392 WHSRMGHPAARVVSLIPESSVSVS----STHLNKACDVCHRAKQTRNSFPLS-INKTLRI 446
Query: 812 LELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEK 871
EL++ DL+GP T S G++Y L I+DDYSR W+ + K A +F +
Sbjct: 447 FELIYCDLWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQF 506
Query: 872 ELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMI 931
+KI VRSD+G EF F ++ G++HE S TP++N VERK+R L +AR +
Sbjct: 507 NVKIKTVRSDNGTEFLC--LTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALR 564
Query: 932 HENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNT 991
+ NL FW E V T+ Y+ NR + + T YE ++P + G Y N
Sbjct: 565 FQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNR 624
Query: 992 KDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESN 1051
K +++R +F GY K +R+++ E S V F + E + S +
Sbjct: 625 NRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRISHEQNVI 684
Query: 1052 AGTTDSEDASESDQPSDSEKYTEVES------CPEAEITPEAESN-----------SEAE 1094
++ A D + E + + C + I+P A S+ +E
Sbjct: 685 EEEEEALWAPIVDGLIEEEVHLGQNAGPTPPICVSSPISPSATSSRSEHSTSSPLDTEVV 744
Query: 1095 PSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGL 1154
P+P SAS Q + P + K + + + + PRR + R + + L
Sbjct: 745 PTPATSTTSASSPSSPTNLQFL-PLSRAKPTTAQAVAPPAVPPPRRQST--RNKAPPVTL 801
Query: 1155 LSIIEPKTV-EEALSDDGWILAMQEELNQFQR----------------NDVWDLVPKPSQ 1197
+ TV +E+ S IL ++ + +R N W + P
Sbjct: 802 KDFVVNTTVCQESPSKLNSILYQLQKRDDTRRFSASHTTYVAIDAQEENHTWTIEDLPPG 861
Query: 1198 KNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYA 1257
K IG++WV++ K N G V R KARLVA G Q+EG DY ETFAPVA++ +RL L A
Sbjct: 862 KRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVA 921
Query: 1258 INHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWY 1317
+ ++QMDV +AFL+G + EEVY+K PPGFE HP+ V +L+K+LYGLKQAPR W+
Sbjct: 922 VKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFE-ASHPNKVCRLRKALYGLKQAPRCWF 980
Query: 1318 DRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDE 1377
++L+ L + F++ D +LF + + IYVDD+I + ++F + +
Sbjct: 981 EKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLASC 1040
Query: 1378 FEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKE 1437
F M +G LK+FLGI++ +S G+Y+ Q KY +++ + L K N P+ L
Sbjct: 1041 FHMKDLGPLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLS 1100
Query: 1438 DTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGT 1497
+ + D + YR ++G L+YL +R D+ FSV + ARF +PRE H A R+ RYLK
Sbjct: 1101 TSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKAD 1160
Query: 1498 TNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTA 1557
G+ R+S D+++ G+CD+D+AGD + R+S +G G++ ISW +K+Q T++ S+A
Sbjct: 1161 PGQGVFLRRSGDFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSA 1220
Query: 1558 EAEYISAASCCTQLLWMKHQLEDYQI-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIK 1616
EAEY + + ++LLW+K L + + + + CD+ +AI ++ NP+ H R KHIEI
Sbjct: 1221 EAEYRAMSFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSAIYIATNPVFHERTKHIEID 1280
Query: 1617 HHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
+HF+R+ KG++ + + T Q ADIFTKPL + F + L +
Sbjct: 1281 YHFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCFSAFRIKLGI 1326
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 514 bits (1324), Expect = e-145
Identities = 330/1017 (32%), Positives = 534/1017 (52%), Gaps = 60/1017 (5%)
Query: 669 SSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYK 728
S + + +V + + NL+S+ D G F + L S G++ + +Y
Sbjct: 337 SQVILTDVRYMPNMTRNLISLGTLEDRG--CWFKSQDGILKIVKGCSTILKGQKRDTLYI 394
Query: 729 INFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA-LC 787
++ + + + D+ +WH RLGH + K ++ + KG + + C
Sbjct: 395 LD-GVTEEGESHSSAEVKDETALWHSRLGHMS----QKGMEILVKKGCLRREVIKELEFC 449
Query: 788 GACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTW 846
C GK + SF V T L +H DL+G P N ASL S+Y + VDDYSR W
Sbjct: 450 EDCVYGKQHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVW 508
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
+ F++ KD A E F + ++ + + K+ K+R+D+G E+ N FE FC++ GI+ +
Sbjct: 509 IYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTC 568
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
TPQQNG+ ER NRT+ + R+M+ + + K FWAEA +T+ Y+ NR +
Sbjct: 569 AYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPE 628
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
E + G P++S+ + GC YI + KLN ++++GIF Y E K Y+V+ E +
Sbjct: 629 EKWTGALPDLSSLRKFGCLAYIHADQG---KLNPRSKKGIFTSYPEGVKGYKVWVLEDKK 685
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSE-----KYTEVESCPEA 1081
S +V F ++ S++ +D ED + +D E T+ S P
Sbjct: 686 CVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSE 745
Query: 1082 EITPE----------AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELI 1131
T + SE E S V++ S + +D ++ I+ K+ S+
Sbjct: 746 ATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFA 805
Query: 1132 IGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSD---DGWILAMQEELNQFQRNDV 1188
S+D + EPK+ +EAL D + W AM+EE+ +N
Sbjct: 806 YYSEDDGKP------------------EPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHT 847
Query: 1189 WDLVPKPSQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARL 1247
WDLV KP + +IG +WVF K G E R ARLVA+G++Q+EG+DY E F+PV +
Sbjct: 848 WDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKH 907
Query: 1248 EAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLY 1307
+IR LLS +++ + L QMDVK+AFL+G +EEE+Y+ QP GFE + + V LK+SLY
Sbjct: 908 VSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLY 967
Query: 1308 GLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI-VQIYVDDIIFGSTNASL 1366
GLKQ+PR W R F+ + R D+ ++ + D I + +YVDD++ S N S
Sbjct: 968 GLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSE 1027
Query: 1367 CKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKVM 1424
E +L+ EFEM +G+ K LG++I++ ++ + + Q Y K++L+ F++++ K +
Sbjct: 1028 VNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPV 1087
Query: 1425 NTPMHPTCTLS----KEDTGTVVDQKL--YRGMIGSLLY-LTASRPDILFSVCLCARFQS 1477
+TP+ L KE K+ Y IGS++Y + +RPD+ +S+ + +RF S
Sbjct: 1088 STPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMS 1147
Query: 1478 DPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFL 1537
P + H AVK + RY++GT L +RK D+ L G+CD+DY + R+S +G +
Sbjct: 1148 KPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTV 1207
Query: 1538 GENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAA 1597
G N ISW SK Q +A+S+ EAEY++ + LW+K + + + + ++ D+ +A
Sbjct: 1208 GGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSA 1267
Query: 1598 ICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFE 1654
I L+KN + H R KHI+I+ HFIR+ + G++ + I TE A+IFTK + + +FE
Sbjct: 1268 ITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFE 1324
Score = 32.3 bits (72), Expect = 2.4
Identities = 18/82 (21%), Positives = 42/82 (50%)
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
F+M++++ I+E F +V+ L L+ +L SLP+R+ V ++ +
Sbjct: 100 FKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSR 159
Query: 212 NTLSVEDLVSSLKVHEMSLNEH 233
L ++D++ + + E L+++
Sbjct: 160 EKLRLDDVMVAARDKERELSQN 181
>At4g27210 putative protein
Length = 1318
Score = 501 bits (1289), Expect = e-141
Identities = 319/1040 (30%), Positives = 506/1040 (47%), Gaps = 95/1040 (9%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFC-DNGYDVTFSKTNCTLVNKDDKSITFNGKRVENV 726
+ ++ + +V + + +LLS+S+ D V F + +K K + G + +
Sbjct: 228 SGTVPLTDVLVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGSNRDGL 287
Query: 727 YKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
Y + D Q + VWH+RLGH + +++
Sbjct: 288 YCLK-DDKQFQAFFSTRQRSASDEVWHRRLGHPHPQIL---------------------- 324
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
+PLE +H DL+GP S+ G +Y V +D YSR++W
Sbjct: 325 -----------------------QPLERVHCDLWGPTTITSVQGFRYYAVFIDHYSRFSW 361
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
+ +K K +F +F ++ + KI + D GGEF + F + HGI + S
Sbjct: 362 IYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSC 421
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEX-TA 965
P TPQQNG+ ERK+R L E+ +M+ ++++ FW EA T+ ++ N + + E +
Sbjct: 422 PHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISP 481
Query: 966 YELFKGRRPNISNFHQLGCTXYILNTKDYLK-KLNAKAQRGIFXGYSERSKAYRVYNSET 1024
YE ++P+ ++ G + +DY + K N + + +F GY+E+ K YR T
Sbjct: 482 YEKLYDKKPDYTSLRSFGSACF-PTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPT 540
Query: 1025 QCVEESMHVKFDDR-EPGSKTSEQSESNAGT---------TDSEDASESDQPSD-SEKYT 1073
+ S HV FD+ P S T + T +DS S S PS S +T
Sbjct: 541 GRLYISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTSTSPSSRSPLFT 600
Query: 1074 EVESCP----EAEITP--------EAESNSEAEPSPKVQNE-----------------SA 1104
+ P + + P SN + SP +E A
Sbjct: 601 SADFPPLPQRKTPLLPTLVPISSVSHASNITTQQSPDFDSERTTDFDSASIGDSSHSSQA 660
Query: 1105 SEDFQDNTQQV-IQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTV 1163
D ++ QQ + H S++ ++ +K + + L +S EPKTV
Sbjct: 661 GSDSEETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRY---VFLSHKVSYPEPKTV 717
Query: 1164 EEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKAR 1223
AL GW AM EE+ W LVP S +++G+KWVFR KL+ G + + KAR
Sbjct: 718 TAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTLNKLKAR 777
Query: 1224 LVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVY 1283
+VA+G+ Q+EGIDY ET++PV R +RL+L A + QMDVK+AFL+G ++E VY
Sbjct: 778 IVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGDLKETVY 837
Query: 1284 VKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTL 1343
+ QP GF D PDHV L KS+YGLKQ+PRAW+D+ S FL++ F + D +LF
Sbjct: 838 MTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAH 897
Query: 1344 KKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYV 1403
+++++ +YVDD++ ++ + EF M+ MG+L +FLGIQ+ + + G+++
Sbjct: 898 NNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGLFM 957
Query: 1404 HQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRP 1463
Q KY ++LL +E C + TP+ D +R + G L YLT +RP
Sbjct: 958 SQQKYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRP 1017
Query: 1464 DILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGD 1523
DI F+V + P S +KRI RY+KGT +G+ Y + L + D+D+
Sbjct: 1018 DIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWGNC 1077
Query: 1524 RIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQI 1583
+ R+S G C F+G NL+SW+SK+ T++ S+ EAEY S + +++LW+ L + +I
Sbjct: 1078 KQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRI 1137
Query: 1584 NANSIP-IYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWAD 1642
P ++CDN +A+ L+ NP H+R KH +I HF+R V L ++ I Q AD
Sbjct: 1138 PLPDTPELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIAD 1197
Query: 1643 IFTKPLSVERFEFIKKNLNM 1662
IFTK L E F ++ L +
Sbjct: 1198 IFTKSLPYEAFIHLRGKLGV 1217
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 500 bits (1287), Expect = e-141
Identities = 317/1023 (30%), Positives = 531/1023 (50%), Gaps = 76/1023 (7%)
Query: 669 SSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYK 728
S+I + +V + + NL+S+ D G K T+ D +T GK+ +Y
Sbjct: 364 STILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVLT--GKKESTLYF 421
Query: 729 INFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCG 788
+ + LA + V + D+ +WH RLGH + LQ++ ++D
Sbjct: 422 LQGTTLAGEANV-IDKEKDETSLWHSRLGHIGAK------GLQVLVSKGHLD-------- 466
Query: 789 ACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGS-KYGLVIVDDYSRWTWV 847
K + SF + V+ + L+ +H DL+G N G +Y + +DD++R TW+
Sbjct: 467 -----KNIMISFGAAKHVTKDK-LDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWI 520
Query: 848 KFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSP 907
FI++KD A F + TQI+ +++ K+ + +D+G EF N+ F+ FC K G++ +
Sbjct: 521 YFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCA 580
Query: 908 RTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYE 967
TPQQNGV ER NRT+ R M+ E+ L K FWAEA +T+ ++ N+ + E
Sbjct: 581 YTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEE 640
Query: 968 LFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCV 1027
+ G P+ + G YI + + KLN +A++GIF GY + K ++V+ E +
Sbjct: 641 KWTGHPPDYKILKKFGSVAYIHSDQG---KLNPRAKKGIFLGYPDGVKRFKVWLLEDRKC 697
Query: 1028 EESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEA 1087
S + F + + ++ ++D + ++ TEVE A
Sbjct: 698 VVSRDIVFQENQM----------------YKELQKNDMSEEDKQLTEVERTLIELKNLSA 741
Query: 1088 ESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR- 1146
+ +++E E AS T+ + K ++ ++ + + R R R
Sbjct: 742 DDENQSEGGDNSNQEQAS-----TTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRA 796
Query: 1147 ------QEESLIGLL-------SIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWD 1190
+++SL+G + EP+T EEA+ + W A EE++ ++ND WD
Sbjct: 797 PQRFVEEDDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWD 856
Query: 1191 LVPKPSQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEA 1249
++ KP K +IG KW+F+ K G E R KARLVA+G+SQ+EGIDY E F+PV + +
Sbjct: 857 VIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVS 916
Query: 1250 IRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGL 1309
IR LLS + + L Q+DVK+AFL+G ++E + + QP G+ED + V LKKSLYGL
Sbjct: 917 IRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGL 976
Query: 1310 KQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI-VQIYVDDIIFGSTNASLCK 1368
KQ+PR W R +F+I + ++R + + ++ + L I + +YVDD++ S N +
Sbjct: 977 KQSPRQWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQ 1036
Query: 1369 EFSKLMQDEFEMSMMGELKFFLGIQINQSKE-GVY-VHQTKYTKELLKKFKLEDCKVMNT 1426
+ + + EFEM +G + LG++I +++E G+ + Q++Y +L+ F ++ KV T
Sbjct: 1037 KLKESLNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQT 1096
Query: 1427 PMHPTCTLSKEDTGTVVDQKLYRGM------IGSLLY-LTASRPDILFSVCLCARFQSDP 1479
P+ L + T+ Y + IGS++Y + SRPD+ + V + +RF S P
Sbjct: 1097 PLGAHFKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKP 1156
Query: 1480 RESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGE 1539
+ H AVK + RY+KGT + L ++K +++ G+CD+DYA D R+S +G G
Sbjct: 1157 SKEHWQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGG 1216
Query: 1540 NLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAIC 1599
N ISW S Q +A+ST EAEY++ A + +W++ + +++ + CD+ +AI
Sbjct: 1217 NTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIA 1276
Query: 1600 LSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKN 1659
LSKN + H R KHI++++HFIR + G + + I T ADIFTK + V + + K
Sbjct: 1277 LSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKL 1336
Query: 1660 LNM 1662
L +
Sbjct: 1337 LRV 1339
Score = 52.8 bits (125), Expect = 2e-06
Identities = 71/313 (22%), Positives = 119/313 (37%), Gaps = 64/313 (20%)
Query: 28 SGKAP--KFNGDPEEFSWWKT-----NMYSFIMGLDEELWDILEDGVDDLDLDEEGAAID 80
SG+A KF+GD + W + M + GL EE ++ED ++ +G D
Sbjct: 3 SGRAEVEKFDGDGDYILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEIS---DGGNQD 59
Query: 81 RRIHTPA--QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVK 138
T K L +K K R I+ S+ K+ + TA M L F
Sbjct: 60 PETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPN 119
Query: 139 EAKALMLVHQYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRW 198
++ Y +M ++ ++EE + F L+S L+ +K D +L SLP ++
Sbjct: 120 RIYLKQRLYGY---KMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQF 176
Query: 199 RPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYK 258
++ K TL +E++ S++ +SK + L + GK+ K++
Sbjct: 177 DQLKETLKYCK--TTLHLEEITSAI--------------RSKILELGASGKLLKNNS--- 217
Query: 259 ASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKG----C 314
DG +D+ + +G KN + KG C
Sbjct: 218 ---------DGLFVQDRG-----------------RSETRGKGPNKNKSRSKSKGAGKTC 251
Query: 315 FNCKKPGHFIADC 327
+ C K GHF C
Sbjct: 252 WICGKEGHFKKQC 264
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 499 bits (1285), Expect = e-141
Identities = 323/1014 (31%), Positives = 535/1014 (51%), Gaps = 62/1014 (6%)
Query: 671 ISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKIN 730
+ + NV + + NLLS+ F +GY +F N TL S+ +R +Y +
Sbjct: 341 VRLTNVRYIPEMDRNLLSLGTFEKSGY--SFKLENGTLSIIAGDSVLLTVRRCYTLYLLQ 398
Query: 731 FSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA-LCGA 789
+ + ++ + ++ D +WH+RLGH + K L L KGL + S C
Sbjct: 399 WRPVTEESL-SVVKRQDDTILWHRRLGHMS----QKNMDLLLKKGLLDKKKVSKLETCED 453
Query: 790 CQKGKIVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVK 848
C GK + F T LE +H DL+G P SL +Y + +DDY+R +
Sbjct: 454 CIYGKAKRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIY 512
Query: 849 FIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPR 908
F+K+KD A + F + ++ + + +I +R+D+G EF N F+ FC + GIL +
Sbjct: 513 FLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAY 572
Query: 909 TPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYEL 968
TPQQNGV ER NRTL E R+M+ ++ L K FWAEA +T+ + N+ + +
Sbjct: 573 TPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKR 632
Query: 969 FKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVE 1028
+ G+ P S + GC ++ +T D KLN +A++GI GY K Y+++ E +
Sbjct: 633 WSGKSPIYSYLRRFGCIAFV-HTDD--GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCV 689
Query: 1029 ESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEIT---- 1084
S +V F +++ S S+DA + + + Y +++ E IT
Sbjct: 690 VSRNVIF----------QENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGD 739
Query: 1085 -PEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRS 1143
P E+ S PSP ++ SE T +IQ + +L+ +D RRT
Sbjct: 740 DPIVEAQSPFNPSPAT-TQTYSEGVNSETD-IIQSPLSY------QLV---RDRDRRTIR 788
Query: 1144 ---HFRQEESLIGLLSI------IEPKTVEEA---LSDDGWILAMQEELNQFQRNDVWDL 1191
F E+ L L IEP EA ++ + W LAM EE+ +N W +
Sbjct: 789 APVRFDDEDYLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTV 848
Query: 1192 VPKPSQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAI 1250
V +P + +IG++W+++ KL G E R KARLVA+GY+Q++GIDY E FAPV + +I
Sbjct: 849 VKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSI 908
Query: 1251 RLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLK 1310
R+L+S + L Q+DVK+AFL+G ++E++Y+ P G+E++ D V L KSLYGLK
Sbjct: 909 RILMSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLK 968
Query: 1311 QAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI-VQIYVDDIIFGSTNASLCKE 1369
QAP+ W ++ + ++ + F R D+ + + L + + +YVDD++ + N +
Sbjct: 969 QAPKQWNEKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQ 1028
Query: 1370 FSKLMQDEFEMSMMGELKFFLGIQI--NQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTP 1427
+ + F+M +G K LG++I N+ + +++ Q Y ++L+ + + + K + TP
Sbjct: 1029 LKEELSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTP 1088
Query: 1428 MHP-----TCTLSKEDTGTVVDQKL-YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPR 1480
+ T+ K++ + + Y +GS++Y + +RPD+ + V + +R+ S P
Sbjct: 1089 LGAHLKMRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPA 1148
Query: 1481 ESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGEN 1540
H VK + RY+KG+ L Y++S D+K++G+CDAD+A + R+S +G LG +
Sbjct: 1149 REHWLGVKWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGS 1208
Query: 1541 LISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICL 1600
ISW S +Q +A+ST EAEY+S + +WMK L+++ S+ I+CD+ +AI L
Sbjct: 1209 TISWKSGQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIAL 1268
Query: 1601 SKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFE 1654
SKN + H R KHI++++ +IR+ + G D+ IDTE ADIFTK + V +F+
Sbjct: 1269 SKNNVHHERTKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQ 1322
Score = 46.2 bits (108), Expect = 2e-04
Identities = 55/225 (24%), Positives = 102/225 (44%), Gaps = 20/225 (8%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELW--DILEDGVDDLDLDEEGAAIDRRIHTPAQ 88
KF+G + ++ WK + + I+GL L D L + V ++ L EE + + +
Sbjct: 10 KFDGRGD-YTMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEE----EEKEEVLRR 64
Query: 89 KKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLV 146
+ L +K K R IV S+ K+ + +A AM L K+ +KAL +
Sbjct: 65 ELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVL-------DKLYMSKALPNRIY 117
Query: 147 HQYEL--FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTA 204
+ +L F+M ++ SIE F +++ L+ D +L SLP +
Sbjct: 118 QKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDT 177
Query: 205 IEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGK 249
++ TLS++++V+++ E+ L ++ S K ++ L K K
Sbjct: 178 LKYGLGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEK 222
>At1g26990 polyprotein, putative
Length = 1436
Score = 490 bits (1261), Expect = e-138
Identities = 332/1023 (32%), Positives = 519/1023 (50%), Gaps = 88/1023 (8%)
Query: 658 KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYD-VTFSKTNCTLVNKDDKSI 716
K++G ++S++NV + K NLLS+S V+F+ C + + +
Sbjct: 458 KIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELM 517
Query: 717 TFNGKRVENVYKINFS-DLADQ-----KVVCLLSMNDKKWVWHKRLGHANWRLISKISKL 770
G +V N+Y +N L D K VC N+ + +WHKRLGH ++ +KI L
Sbjct: 518 LGKGSQVGNLYILNLDKSLVDVSSFPGKSVCSSVKNESE-MWHKRLGHPSF---AKIDTL 573
Query: 771 QLVKGLPNIDYHSDAL-CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLY 829
V LP + D+ C C K FKS + + + EL+HID +GP + ++
Sbjct: 574 SDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVD 632
Query: 830 GSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENE 889
+Y L IVDD+SR TW+ +K K VF SF ++ + K+ VRSD+ E +
Sbjct: 633 SYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFN 692
Query: 890 PFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSC 949
ELF K GI + P TP+QN VVERK++ L +AR ++ ++ + +W + V T+
Sbjct: 693 --ELFA-KEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAV 749
Query: 950 YIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXG 1009
++ NR+ + T YE +P+ S+ GC Y + K + +A+ IF G
Sbjct: 750 FLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLG 809
Query: 1010 YSERSKAYRVYNSETQCVEESMHVKF-DDREPGSKTSEQSESNAGTTDSEDASESDQPSD 1068
Y K Y++ + ET V S HV F +D P + ++ +D D
Sbjct: 810 YPMGYKGYKLLDIETYSVSISRHVIFYEDIFPFASSNI----------------TDAAKD 853
Query: 1069 SEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPE 1128
+ + + E P +S+S+A P +ES+S F + +PK + P
Sbjct: 854 FFPHIYLPAPNNDEHLPLVQSSSDA---PHNHDESSSMIFVPS-----EPKSTRQRKLPS 905
Query: 1129 EL--IIGSKDSPRRTR----------SHFRQEESLIGLLSIIE----PKTVEEALSDDGW 1172
L ++P T+ S+ E ++II P+ EA D W
Sbjct: 906 HLQDFHCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITATKLPQKYSEARLDKVW 965
Query: 1173 ILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQ 1232
AM +E++ F R W + P+ K +G KW+ K G + R+KARLVA+GY+QQ
Sbjct: 966 NDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQ 1025
Query: 1233 EGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFED 1292
EGID+ TF+PVA++ +++LLS A L+Q+D+ +A LNG +EEE+Y+K PPG+ +
Sbjct: 1026 EGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSE 1085
Query: 1293 LKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQI 1352
++ G + +P A + D TLF + L+V +
Sbjct: 1086 IQ-------------GQEVSPNA---------------KCHGDHTLFVKAQDGFFLVVLV 1117
Query: 1353 YVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKEL 1412
YVDDI+ ST + E + + F++ +GE KFFLGI+I ++ +G+ + Q KY +L
Sbjct: 1118 YVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIARNADGISLCQRKYVLDL 1177
Query: 1413 LKKFKLEDCKVMNTPMHPTCTLSKEDTGTVV-DQKLYRGMIGSLLYLTASRPDILFSVCL 1471
L DCK + PM P LSK DTGT++ D K YR ++G L YL +RPDI F+V
Sbjct: 1178 LASSDFSDCKPSSIPMEPNQKLSK-DTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSK 1236
Query: 1472 CARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTS 1531
A++ S P + HL A+ +I RYLKGT GL Y ++ L GF D+D+ R+ +
Sbjct: 1237 LAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVT 1296
Query: 1532 GNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPI 1590
G F+G +L+SW SK+Q ++MS+AEAEY + + +L+W+ + L ++I + +
Sbjct: 1297 GFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYL 1356
Query: 1591 YCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSV 1650
YCDN AA+ ++ N + H R KHIE H +R ++ GIL F+ T++Q AD TKPL
Sbjct: 1357 YCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPLYP 1416
Query: 1651 ERF 1653
+ F
Sbjct: 1417 KPF 1419
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,821,890
Number of Sequences: 26719
Number of extensions: 1710577
Number of successful extensions: 7669
Number of sequences better than 10.0: 409
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 6187
Number of HSP's gapped (non-prelim): 1178
length of query: 1667
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1554
effective length of database: 8,299,349
effective search space: 12897188346
effective search space used: 12897188346
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC134322.6