BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133862.6 - phase: 0
(368 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22070 unknown protein 459 e-129
At3g52060 unknown protein 360 e-100
At4g32290 unknown protein 275 3e-74
At5g25330 putative protein 267 6e-72
At4g31353 unknown protein 159 3e-39
At1g10280 unknown protein 149 2e-36
At3g21310 unknown protein 148 5e-36
At1g51770 hypothetical protein 147 9e-36
At5g25970 putative protein 144 6e-35
At4g25870 unknown protein 142 4e-34
At5g16170 unknowen protein 141 5e-34
At2g19160 unknown protein 136 2e-32
At1g68390 hypothetical protein 135 3e-32
At5g57270 unknown protein 134 6e-32
At5g11730 unknown protein 134 1e-31
At1g68380 unknown protein 125 5e-29
At1g11940 unknown protein 124 8e-29
At1g10880 hypothetical protein 123 2e-28
At5g14550 putative protein 115 5e-26
At1g73810 unknown protein (At1g73810) 106 2e-23
>At5g22070 unknown protein
Length = 362
Score = 459 bits (1180), Expect = e-129
Identities = 229/371 (61%), Positives = 280/371 (74%), Gaps = 12/371 (3%)
Query: 1 MFSNPYLLTFSLLLSLP-ILFFLAPAILPPHPSPIPISPTDELDDINLFNTAISHSTPPS 59
MFSN ++L FSLLL LP + FF+AP + P P I +DE+DD +LF A +
Sbjct: 1 MFSNQFVLFFSLLLCLPFVFFFVAPHVFPSPPGESLIPISDEIDDRSLFIAAAGST---- 56
Query: 60 SSSHPSKFFHLSSKNPTFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNL 119
S SH S + NP KIAFLFLTN+DLHF P+W+ FF L+NVYVH+DP VN+
Sbjct: 57 SLSHLSS----GNPNPKLKIAFLFLTNSDLHFAPIWDRFFSGHSKSLYNVYVHADPFVNV 112
Query: 120 TLLRSSNNYNPIFKFISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLH 179
T + + + F ++K+T RASPTLISATRRLLA+A LDD +N YF VLSQYCIPLH
Sbjct: 113 TRPGNGSVFENAF-IANAKRTARASPTLISATRRLLATAFLDDPANTYFAVLSQYCIPLH 171
Query: 180 SFDYIYKSLFLSPTFDLTDSESTQF--GVRLKYKSFIEIINNGPRLWKRYTARGRYAMMP 237
SF+Y+Y SLF S FD +D + G+R+ Y+SF+E+I++ PRLWKRYTARGRYAMMP
Sbjct: 172 SFNYVYSSLFESSIFDKSDPDPNPNPRGIRILYRSFMELISDEPRLWKRYTARGRYAMMP 231
Query: 238 EVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDS 297
EVPFEKFRVGSQFF +TR+HAL+ +KDR LWRKFK+PCYR DECYPEEHYFPTLL+M+D
Sbjct: 232 EVPFEKFRVGSQFFVMTRRHALLTIKDRILWRKFKLPCYRSDECYPEEHYFPTLLNMKDP 291
Query: 298 DGVTGYTLTNVNWTGTVNGHPHTYQPEEVSPELILRLRKSTNSESFLFARKFVPDCLEPL 357
DG TGYTLT VNWTGTV GHP+TY+P+EV PELI RLR+S +S S+ FARKF PDCL+PL
Sbjct: 292 DGCTGYTLTRVNWTGTVKGHPYTYKPKEVVPELIQRLRRSNHSSSYFFARKFTPDCLKPL 351
Query: 358 MGIAKSVIFKD 368
+ IA SVIF+D
Sbjct: 352 LAIADSVIFRD 362
>At3g52060 unknown protein
Length = 346
Score = 360 bits (924), Expect = e-100
Identities = 198/372 (53%), Positives = 258/372 (69%), Gaps = 30/372 (8%)
Query: 1 MFSNPYLL-TFSLLLSLPILFFLAPAILPPH---PSPIPISPTDELDDINLFNTAISHST 56
MFS+ L+ + SL LSL +LFFL IL PH S IS D+LDD++LF+ A+
Sbjct: 1 MFSSSTLVYSLSLFLSLSLLFFLF--ILSPHILLSSSTLISTADDLDDLSLFHRAVV--- 55
Query: 57 PPSSSSHPSKFFHLSSKNPTFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPR 116
SSS++ ++ S NP KIAFLFLTN+DL F PLW FFQ L+NVY+H+DP
Sbjct: 56 --SSSTNNNRRLISLSPNPPPKIAFLFLTNSDLTFLPLWESFFQGHQD-LYNVYIHADPT 112
Query: 117 VNLTLLRSSNNYNPIFKFISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCI 176
+++ L S++ N KFI +++T RASPTLISA RRLLA+AILDD +N YF ++SQ+CI
Sbjct: 113 SSVSPLLDSSSINA--KFIPARRTARASPTLISAERRLLANAILDDPNNLYFALISQHCI 170
Query: 177 PLHSFDYIYKSLFLSPTFDLTDSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYAMM 236
PLHSF YI+ LF S+ Q +SFIEI+++ P L KRY ARG AM+
Sbjct: 171 PLHSFSYIHNHLF---------SDHHQ-------QSFIEILSDEPFLLKRYNARGDDAML 214
Query: 237 PEVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMED 296
PE+ ++ FRVGSQFF L ++HAL+V+K+R LWRKFK+PC + CYPEEHYFPTLLS+ED
Sbjct: 215 PEIQYQDFRVGSQFFVLAKRHALMVIKERKLWRKFKLPCLDVESCYPEEHYFPTLLSLED 274
Query: 297 SDGVTGYTLTNVNWTGTVNGHPHTYQPEEVSPELILRLRKSTNSESFLFARKFVPDCLEP 356
G + +TLT VNWTG+V GHPHTY E+SP+LI LR+S +S + FARKF P+ L+P
Sbjct: 275 PQGCSHFTLTRVNWTGSVGGHPHTYDASEISPQLIHSLRRSNSSLDYFFARKFTPESLQP 334
Query: 357 LMGIAKSVIFKD 368
LM IA +VIF+D
Sbjct: 335 LMEIADAVIFRD 346
>At4g32290 unknown protein
Length = 384
Score = 275 bits (703), Expect = 3e-74
Identities = 167/401 (41%), Positives = 220/401 (54%), Gaps = 70/401 (17%)
Query: 10 FSLLLSLPILFFLAPAILPPHPSPIPISPTDELDDINLFNTAISHSTPPSSSSHPS---- 65
F LL +L + +A ISP +++F+ S + P SSSS P+
Sbjct: 7 FPLLCALFLCLPVAVIFTVQRELTCVISPEFGFRSLSVFSL-YSRNVPDSSSSSPAVRIR 65
Query: 66 --------KFFHLSSK-NP------TFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVY 110
LSS+ NP T KIAF++LT + L F PLW +FF L+NVY
Sbjct: 66 QPIPKEDDPLLRLSSRVNPNLPPGSTRKIAFMYLTTSPLPFAPLWEMFFDGISKNLYNVY 125
Query: 111 VHSDPRVNLTLLRSSNNYNPIF------KFISSKKTYRASPTLISATRRLLASAILDDAS 164
VH+DP + Y+P F + I SK + R +PTL +A RRLLA A+LDD
Sbjct: 126 VHADP---------TREYDPPFSGVFLNRVIHSKPSLRHTPTLTAAARRLLAHALLDDPL 176
Query: 165 NAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLTDSESTQFGVRLKYKSFIEIINNGPRLW 224
N F V+S C+P+ SFD+ YK+L S KSFIEI+ + P +
Sbjct: 177 NYMFAVISPSCVPIRSFDFTYKTLVSSR------------------KSFIEILKDEPWQF 218
Query: 225 KRYTARGRYAMMPEVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPE 284
R+TA GR+AM+PEV E+FR+GSQF+ L R+HA VV +DR +W KF C R+D CYPE
Sbjct: 219 DRWTAIGRHAMLPEVKLEEFRIGSQFWVLKRRHARVVARDRRIWVKFNQTCVREDSCYPE 278
Query: 285 EHYFPTLLSMEDSDGVTGYTLTNVNWTGTVNGHPHTYQPEEVSPELILRLRKS------- 337
E YFPTLL+M D G TLT+V+WT GHP Y+PEEV PEL+LRLRK+
Sbjct: 279 ESYFPTLLNMRDPRGCVPATLTHVDWTVNDGGHPRMYEPEEVVPELVLRLRKTRPRYGED 338
Query: 338 ----------TNSESFLFARKFVPDCLEPLMGIAKSVIFKD 368
+ FLFARKF P LEPL+G+A++V+F D
Sbjct: 339 GINGSEWSKVERMDPFLFARKFSPQALEPLLGMARTVLFND 379
>At5g25330 putative protein
Length = 366
Score = 267 bits (683), Expect = 6e-72
Identities = 149/302 (49%), Positives = 183/302 (60%), Gaps = 31/302 (10%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTP--SKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFI 135
K+AF+FLT L PLW LFF + L+NVYVH DP N I
Sbjct: 81 KLAFMFLTTNSLPLAPLWELFFNQSSHHKSLYNVYVHVDPTQKHKPGSHGTFQNRIIP-- 138
Query: 136 SSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFD 195
SSK YR +PTLISA RRLLA A+L+D SN FI+LS CIPLHSF++ YK+L S
Sbjct: 139 SSKPAYRHTPTLISAARRLLAHALLEDPSNYMFILLSPSCIPLHSFNFTYKTLVSST--- 195
Query: 196 LTDSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTR 255
KSFIEI+ + P ++R+ ARG YAM PEVP E+FR+GSQF+TLTR
Sbjct: 196 ---------------KSFIEILKDEPGWYERWAARGPYAMFPEVPPEEFRIGSQFWTLTR 240
Query: 256 KHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVN 315
HAL+VV D +W KF C R+D CYPEEHYFPTLL+M D G T+T+V+W+ +
Sbjct: 241 AHALMVVSDVEIWSKFNKSCVREDICYPEEHYFPTLLNMRDPQGCVSATVTHVDWSVNDH 300
Query: 316 GHPHTYQPEEVSPELILRLRKS---------TNSESFLFARKFVPDCLEPLMGIAKSVIF 366
GHP TY+P EV ELI +LR + T + FLFARKF P + LM I +SVIF
Sbjct: 301 GHPRTYKPLEVRAELIQKLRSARPRYGDGNRTRKDPFLFARKFSPAGINQLMNITRSVIF 360
Query: 367 KD 368
D
Sbjct: 361 ND 362
>At4g31353 unknown protein
Length = 376
Score = 159 bits (401), Expect = 3e-39
Identities = 107/314 (34%), Positives = 164/314 (52%), Gaps = 57/314 (18%)
Query: 72 SKNPTFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPI 131
SK K+AF+FLT L F PLW +FF+ +K F+VYVH+ + + + +S+ + +
Sbjct: 83 SKTANPKLAFMFLTPGTLPFEPLWEMFFRGHENK-FSVYVHASKK---SPVHTSSYF--V 136
Query: 132 FKFISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLS 191
+ I S K +++ A RRLLA A++D N +FI+LS C+PL F+YIY L +
Sbjct: 137 GRDIHSHKVAWGQISMVDAERRLLAHALVDP-DNQHFILLSDSCVPLFDFNYIYNHLIFA 195
Query: 192 PTFDLTDSESTQFGVRLKYKSFIEIINN-GPRLWKRYTARGRYAMMPEVPFEKFRVGSQF 250
SFI+ + GP RY+ M+PEV + FR GSQ+
Sbjct: 196 NL------------------SFIDCFEDPGPHGSGRYSQH----MLPEVEKKDFRKGSQW 233
Query: 251 FTLTRKHALVVVKDRTLWRKFKVPCYRDDE---CYPEEHYFPTLLSMEDSDGVTGYTLTN 307
F++ R+HA+VV+ D + KFK+ C + E CY +EHYFPTL +M D DG+ +++T+
Sbjct: 234 FSMKRRHAIVVMADSLYYTKFKLYCRPNMEGRNCYADEHYFPTLFNMIDPDGIANWSVTH 293
Query: 308 VNWTGTVNGHPHTYQPEEVSPELILRLR-----------------------KSTNSESFL 344
V+W+ HP Y +++P LI +++ K +L
Sbjct: 294 VDWS-EGKWHPKLYNARDITPYLIRKIKSIQLAYHVTSDLKKVTTVKPCLWKGEQRPCYL 352
Query: 345 FARKFVPDCLEPLM 358
FARKF P+ L+ LM
Sbjct: 353 FARKFNPETLDRLM 366
>At1g10280 unknown protein
Length = 412
Score = 149 bits (377), Expect = 2e-36
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 48/302 (15%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
K+AF+FLT L PLW FF+ K +VYVH+ P ++ + R S Y+ + I S
Sbjct: 143 KVAFMFLTRGPLPMLPLWEKFFKGN-EKYLSVYVHTPPGYDMNVSRDSPFYD---RQIPS 198
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
++ SP L A +RLLA+A+LD SN F++LS+ C+P+++F +Y L ++ +
Sbjct: 199 QRVEWGSPLLTDAEKRLLANALLD-FSNERFVLLSESCVPVYNFSTVYTYL-INSAYSFV 256
Query: 198 DS--ESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKFRVGSQFFTL 253
DS E T++G RGRY+ M+P++ +R GSQ+F +
Sbjct: 257 DSYDEPTRYG------------------------RGRYSRKMLPDIKLHHWRKGSQWFEV 292
Query: 254 TRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGT 313
RK A+ ++ D + FK C CYP+EHY PT L+M ++T V+W +
Sbjct: 293 NRKIAIYIISDSKYYSLFKQFC--RPACYPDEHYIPTFLNMFHGSMNANRSVTWVDW--S 348
Query: 314 VNG-HPHTYQPEEVSPELILRLRKS---------TNSESFLFARKFVPDCLEPLMGIAKS 363
+ G HP TY ++ + +RK+ S FLFARKF P L PLM ++ +
Sbjct: 349 IGGPHPATYAAANITEGFLQSIRKNETDCLYNEEPTSLCFLFARKFSPSALAPLMNLSST 408
Query: 364 VI 365
V+
Sbjct: 409 VL 410
>At3g21310 unknown protein
Length = 383
Score = 148 bits (373), Expect = 5e-36
Identities = 99/296 (33%), Positives = 152/296 (50%), Gaps = 37/296 (12%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
K+AF+FLT L F PLW FF+ +++YVH+ P SS Y + I S
Sbjct: 115 KMAFMFLTKGPLPFAPLWERFFKGHEG-FYSIYVHTLPNYRSDFPSSSVFYR---RQIPS 170
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ ++ A RRLLA+A+LD SN +F++LS+ CIPL F+++Y+
Sbjct: 171 QHVAWGEMSMCDAERRLLANALLD-ISNEWFVLLSEACIPLRGFNFVYR----------- 218
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTRKH 257
+ R +Y + +GP RY+ YAM PEV ++R GSQ+F + R
Sbjct: 219 ------YVSRSRYSFMGSVDEDGPYGRGRYS----YAMGPEVSLNEWRKGSQWFEINRAL 268
Query: 258 ALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVNGH 317
A+ +V+D + KFK C CY +EHYFPT+LS+ D + TLT +W+ H
Sbjct: 269 AVDIVEDMVYYNKFKEFC--RPPCYVDEHYFPTMLSIGYPDFLANRTLTWTDWS-RGGAH 325
Query: 318 PHTYQPEEVSPELILRLRK--------STNSESFLFARKFVPDCLEPLMGIAKSVI 365
P T+ +++ + I +L + + +LFARKF P L+PL+ +A V+
Sbjct: 326 PATFGKADITEKFIKKLSRGKACFYNDQPSQVCYLFARKFAPSALKPLLKLAPKVL 381
>At1g51770 hypothetical protein
Length = 399
Score = 147 bits (371), Expect = 9e-36
Identities = 107/301 (35%), Positives = 153/301 (50%), Gaps = 47/301 (15%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
K+AF+FL L F PLW F + L+++YVHS P RSS Y ++I S
Sbjct: 117 KLAFMFLAKGPLPFAPLWEKFCKGHEG-LYSIYVHSLPSYKSDFSRSSVFYR---RYIPS 172
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ ++ A RRLLA+A+LD SN +F++LS+ CIPL F +IY +
Sbjct: 173 QAVAWGEMSMGEAERRLLANALLD-ISNEWFVLLSESCIPLRGFSFIYSYV--------- 222
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKFRVGSQFFTLTR 255
SES +Y GP RGRY M PE+ ++R GSQ+F + R
Sbjct: 223 -SES-------RYSFMGAADEEGP------DGRGRYRTEMEPEITLSQWRKGSQWFEINR 268
Query: 256 KHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVN 315
K A+ +V+D T + KFK C CY +EHYFPT+LSM+ + TLT +W+
Sbjct: 269 KLAVEIVQDTTYYPKFKEFC--RPPCYVDEHYFPTMLSMKHRVLLANRTLTWTDWS-RGG 325
Query: 316 GHPHTYQPEEVSPELILRLRKSTNSES-----------FLFARKFVPDCLEPLMGIAKSV 364
HP T+ +V+ L+K T ++S +LFARKF P LEPL+ +A +
Sbjct: 326 AHPATFGKADVTESF---LKKLTGAKSCLYNDHQSQICYLFARKFAPSALEPLLQLAPKI 382
Query: 365 I 365
+
Sbjct: 383 L 383
>At5g25970 putative protein
Length = 436
Score = 144 bits (364), Expect = 6e-35
Identities = 107/298 (35%), Positives = 155/298 (51%), Gaps = 41/298 (13%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
KIAF+FLT L PLW + KL++VY+HS + SS Y + I S
Sbjct: 168 KIAFMFLTMGPLPLAPLWERLLKGH-EKLYSVYIHSPVSSSAKFPASSVFYR---RHIPS 223
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ T+ A RRLLA+A+LD SN +F++LS+ CIPL +F IY + T
Sbjct: 224 QVAEWGRMTMCDAERRLLANALLD-ISNEWFVLLSESCIPLFNFTTIYTYM--------T 274
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKFRVGSQFFTLTR 255
SE + G SF + P + RGRY M PEV +++R GSQ+F + R
Sbjct: 275 KSEHSFMG------SF-----DDPGAY----GRGRYHGNMAPEVFIDQWRKGSQWFEINR 319
Query: 256 KHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVN 315
+ A+ +VKD + KFK C CY +EHYFPT+L++E + ++T V+W+
Sbjct: 320 ELAVSIVKDTLYYPKFKEFC--QPACYVDEHYFPTMLTIEKPAALANRSVTWVDWS-RGG 376
Query: 316 GHPHTYQPEEVSPELILRLRKSTN--------SESFLFARKFVPDCLEPLMGIAKSVI 365
HP T+ ++++ E R+ K N S +LFARKF P LEPL+ IA ++
Sbjct: 377 AHPATFGAQDINEEFFARILKGDNCTYNGGYTSMCYLFARKFSPSALEPLVQIAPKLL 434
>At4g25870 unknown protein
Length = 389
Score = 142 bits (357), Expect = 4e-34
Identities = 100/312 (32%), Positives = 152/312 (48%), Gaps = 59/312 (18%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
KIAFLFLT L F LW+ FF+ K F++Y+H + + R ++ + I S
Sbjct: 99 KIAFLFLTPGTLPFEKLWDEFFKGHEGK-FSIYIHPSKERPVHISRHFSD-----REIHS 152
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ +++ A +RLL SA L+D N +F+++S+ CIPLH+FDY Y+ L S
Sbjct: 153 DEVTWGRISMVDAEKRLLVSA-LEDPDNQHFVLVSESCIPLHTFDYTYRYLLYSNV---- 207
Query: 198 DSESTQFGVRLKYKSFIE-IINNGPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTRK 256
SFIE ++ GP T R M+PE+ E FR G+Q+FT+ R+
Sbjct: 208 --------------SFIESFVDPGPH----GTGRHMEHMLPEIAKEDFRKGAQWFTMKRQ 249
Query: 257 HALVVVKDRTLWRKFKVPC----YRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTG 312
HA++V+ D + KF+ C D C +EHY PT +M D G++ +++T V+W+
Sbjct: 250 HAIIVMADGLYYSKFREYCGPGIEADKNCIADEHYLPTFFNMIDPMGISNWSVTFVDWSE 309
Query: 313 TVNGHPHTYQPEEVSPELILRLRKSTNS------------------------ESFLFARK 348
HP TY E+S E + + S +LFARK
Sbjct: 310 R-RWHPKTYGGNEISLEFMKNVTSEDMSVHVTSVGKHGDELHWPCTWNGIKRPCYLFARK 368
Query: 349 FVPDCLEPLMGI 360
F PD L+ L+ +
Sbjct: 369 FHPDTLDTLVNL 380
>At5g16170 unknowen protein
Length = 411
Score = 141 bits (356), Expect = 5e-34
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 48/341 (14%)
Query: 42 LDDINLFNTAISHSTPPSSSSHPSKFF--HLSSKNPTFKIAFLFLTNTDLHFTPLWNLFF 99
+ D LF A S S+P SS S S H + K+AF+F+T L LW FF
Sbjct: 98 MSDQELFTKASSLSSPTSSLSSSSWLGRRHNNDGKMAVKVAFMFMTGGRLPLAGLWEKFF 157
Query: 100 QTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISSKKTYRASPTLISATRRLLASAI 159
+ +++YVH++P + +S Y+ + I S+ Y + +++ A +RLLA+A+
Sbjct: 158 EGHEG-FYSIYVHTNPSFQDSFPETSVFYS---RRIPSQPVYWGTSSMVDAEKRLLANAL 213
Query: 160 LDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLTDSESTQFGVRLKYKSFIEIINN 219
LD+ SN F++LS CIPL++F IY L G L SFI ++
Sbjct: 214 LDE-SNQRFVLLSDSCIPLYNFTTIYDYLT---------------GTNL---SFIGSFDD 254
Query: 220 GPRLWKRYTARGRY--AMMPEVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYR 277
R + RGRY M P + +R GSQ+F TR+ AL +++D ++ F C
Sbjct: 255 -----PRKSGRGRYNHTMYPHINITHWRKGSQWFETTRELALHIIEDTVYYKIFDQHC-- 307
Query: 278 DDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVNGHPHTYQPEEVSPELILRLR-- 335
CY +EHY PTL+ M + TLT V+W+ HP + +++ E + R+R
Sbjct: 308 KPPCYMDEHYIPTLVHMLHGEMSANRTLTWVDWS-KAGPHPGRFIWPDITDEFLNRIRFK 366
Query: 336 -----------KSTNSESFLFARKFVPDCLEPLMGIAKSVI 365
T S+ FLFARKF + LEPL+ I+ V+
Sbjct: 367 EECVYFGRGGENVTTSKCFLFARKFTAETLEPLLRISPIVL 407
>At2g19160 unknown protein
Length = 394
Score = 136 bits (343), Expect = 2e-32
Identities = 101/309 (32%), Positives = 146/309 (46%), Gaps = 58/309 (18%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
KIAF+FLT L F LW+LFFQ K F+VY+H+ + R N + I S
Sbjct: 106 KIAFMFLTPGTLPFEKLWDLFFQGHEGK-FSVYIHASKDTPVHTSRYFLN-----REIRS 159
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ ++I A RRLL +A L D N F++LS C+PL SF+Y+Y + S
Sbjct: 160 DEVVWGRISMIDAERRLLTNA-LRDPENQQFVLLSDSCVPLRSFEYMYNYMMHSNV---- 214
Query: 198 DSESTQFGVRLKYKSFIEIINN-GPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTRK 256
S+++ ++ GP T R M+PE+P E FR G+Q+F++ R+
Sbjct: 215 --------------SYVDCFDDPGPH----GTGRHMDHMLPEIPREDFRKGAQWFSMKRQ 256
Query: 257 HALVVVKDRTLWRKFKVPC----YRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTG 312
HA+V V D + KF+ C + C +EHY PT M D G+ +T+T V+W+
Sbjct: 257 HAVVTVADNLYYSKFRDYCGPGVEGNKNCIADEHYLPTFFYMLDPTGIANWTVTYVDWSE 316
Query: 313 TVNGHPHTYQPEEVSPELILRLR-----KSTNSES------------------FLFARKF 349
HP Y PE+++ ELI + SE +LF RKF
Sbjct: 317 R-KWHPRKYMPEDITLELIKNISSIDAVSRVTSEKNGVVSWTHCMWNGIKRPCYLFGRKF 375
Query: 350 VPDCLEPLM 358
D L+ LM
Sbjct: 376 HADTLDKLM 384
>At1g68390 hypothetical protein
Length = 408
Score = 135 bits (341), Expect = 3e-32
Identities = 119/371 (32%), Positives = 175/371 (47%), Gaps = 63/371 (16%)
Query: 21 FLAPAILPPHPSPIPISPTDELDDINLFNTAISHSTPPSSSSHPSKFFHL--------SS 72
F+ ++ P P P P SP E + N S PP H + L
Sbjct: 73 FIVSSLPPSPPPPPPPSPPSEPEQ----NGLKSFIEPPEKLMHDMEDEELLWRASMAPKI 128
Query: 73 KNPTF----KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNY 128
KN F K+AF+F+T L LW FF+ LF +YVHS P N S+
Sbjct: 129 KNYPFPRTPKVAFMFMTKGHLPLARLWERFFRGHEG-LFTIYVHSYPSYN-----QSDPE 182
Query: 129 NPIFK--FISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYK 186
+ +F+ I SK+ ++ A +RLLA+A+LD SN F++LS+ CIPL +F +Y
Sbjct: 183 DSVFRGRHIPSKRVDWGYVNMVEAEQRLLANALLD-ISNERFVLLSESCIPLFNFTTVYS 241
Query: 187 SLFLSPTFDLTDSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKF 244
L STQ V +S+ ++ G RGRY+ M P V +
Sbjct: 242 YLI----------NSTQTHV----ESYDQLGGVG---------RGRYSPLMQPHVQLRHW 278
Query: 245 RVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDS--DGVTG 302
R GSQ+ + R AL ++ DR W F C+ CY +EHY PTLL+++ S +
Sbjct: 279 RKGSQWIEVDRAMALEIISDRIYWPLFYSYCHHG--CYADEHYIPTLLNIKSSLKRRNSN 336
Query: 303 YTLTNVNWTGTVNGHPHTYQPEEVSPELILRLRKS----TNSES----FLFARKFVPDCL 354
TLT V+W+ HP+ + EV+ E + LR N E +LFARKF+P L
Sbjct: 337 RTLTWVDWS-KGGPHPNRFIRHEVTAEFMENLRSGGECLYNGEETNICYLFARKFLPTAL 395
Query: 355 EPLMGIAKSVI 365
+ L+ ++++V+
Sbjct: 396 DRLLRLSRTVL 406
>At5g57270 unknown protein
Length = 388
Score = 134 bits (338), Expect = 6e-32
Identities = 87/258 (33%), Positives = 137/258 (52%), Gaps = 33/258 (12%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
KIAF+FLT L F LW+ FFQ + F++Y+H L + S +++ + I S
Sbjct: 98 KIAFMFLTPGTLPFEKLWDKFFQGQEGR-FSIYIHPS---RLRPVHISRHFSD--REIHS 151
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+++ A RRLLA+A L+D N +F++LS+ CIPLH+FDY Y+ L +
Sbjct: 152 DHVTWGRISMVDAERRLLANA-LEDPDNQHFVLLSESCIPLHTFDYTYRYLMHANV---- 206
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTRKH 257
SFI+ + L T R M+PE+P + FR G+Q+FT+ R+H
Sbjct: 207 --------------SFIDSFED---LGPHGTGRHMDHMLPEIPRQDFRKGAQWFTMKRQH 249
Query: 258 ALVVVKDRTLWRKFKVPC----YRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGT 313
A++V+ D + KF+ C + C +EHY PT M D G++ +++T V+W+
Sbjct: 250 AVIVMADGLYYSKFREYCRPGVEANKNCIADEHYLPTFFHMLDPGGISNWSVTYVDWSER 309
Query: 314 VNGHPHTYQPEEVSPELI 331
HP TY+ +VS +L+
Sbjct: 310 -RWHPKTYRARDVSLKLL 326
>At5g11730 unknown protein
Length = 386
Score = 134 bits (336), Expect = 1e-31
Identities = 99/298 (33%), Positives = 145/298 (48%), Gaps = 41/298 (13%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
K+AF+FLT L LW F + L++VY+H P SS + + I S
Sbjct: 118 KVAFMFLTKGPLPLASLWERFLKGHKG-LYSVYLHPHPSFTAKFPASSVFHR---RQIPS 173
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ ++ A +RLLA+A+LD SN +F+++S+ CIPL++F IY L
Sbjct: 174 QVAEWGRMSMCDAEKRLLANALLD-VSNEWFVLVSESCIPLYNFTTIYSYLS-------- 224
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKFRVGSQFFTLTR 255
R K+ + GP RGRY M PEVP K+R GSQ+F + R
Sbjct: 225 ---------RSKHSFMGAFDDPGP------FGRGRYNGNMEPEVPLTKWRKGSQWFEVNR 269
Query: 256 KHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVN 315
A +VKD + KFK C CY +EHYFPT+L++E + +LT V+W+
Sbjct: 270 DLAATIVKDTLYYPKFKEFC--RPACYVDEHYFPTMLTIEKPTVLANRSLTWVDWS-RGG 326
Query: 316 GHPHTYQPEEVSPELILRLRKSTN--------SESFLFARKFVPDCLEPLMGIAKSVI 365
HP T+ +++ ++ N S +LFARKF P LEPL+ IA ++
Sbjct: 327 PHPATFGRSDITENFFGKIFDGRNCSYNGRNTSMCYLFARKFAPSALEPLLHIAPKIL 384
>At1g68380 unknown protein
Length = 392
Score = 125 bits (313), Expect = 5e-29
Identities = 117/386 (30%), Positives = 178/386 (45%), Gaps = 69/386 (17%)
Query: 3 SNPYLLTFSLLLSLPILFFLAPAILPPHPSPIPISPTDELDDINLFNTAISHSTPPSSSS 62
S+P LT S+ LFF+ P P PI +SP+ + + +++F + +
Sbjct: 53 SSPSSLTIQ---SVSQLFFVTP------PPPI-LSPSFQDNGLDMFLIPLKNIM---HDM 99
Query: 63 HPSKFFHLSSKNPTF---------KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHS 113
++ +S +P K+AF+FLT L PLW FF+ LF +YVH+
Sbjct: 100 EDNELLWRASMDPKIRDYPYPRIPKVAFMFLTWGPLPLAPLWERFFRGHEG-LFTIYVHT 158
Query: 114 DPRVNLTLLRSSNNYNPIFKFISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQ 173
+ + + + S Y + I SK+ + ++ A RRLLA+A+LD +N FI+LS+
Sbjct: 159 NSSYDEFMPQDSVFYG---RRIPSKRVDWGNANMVEAERRLLANALLD-INNERFILLSE 214
Query: 174 YCIPLHSFDYIYKSLFLSPTFDLTDSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRY 233
CIPL +F +Y S + T DS G R++Y
Sbjct: 215 SCIPLFNFSTVY-SFLIDSTLTHVDSYDLTIG-RVRYDR--------------------- 251
Query: 234 AMMPEVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLS 293
M P + ++R GSQ+F L R AL VV D W P ++ P+EHY PTLL+
Sbjct: 252 RMYPHIRMHQWRKGSQWFELDRAMALEVVSDTFYW-----PIFKAYSRCPDEHYIPTLLN 306
Query: 294 MEDSDGV--TGYTLTNVNWTGTVNGHPHTYQPEEVSPELILRLRKST------NSES--- 342
M S G+ TLT +W+ HP + EV+ E + LR + N E+
Sbjct: 307 MRPSLGLRNANRTLTWTDWSKR-RAHPRLFGEWEVNVEFLEWLRMKSVGDCKKNGENKMR 365
Query: 343 --FLFARKFVPDCLEPLMGIAKSVIF 366
FLFARKF L+ L+ +A V++
Sbjct: 366 LCFLFARKFSSTALDELLRLASIVMY 391
>At1g11940 unknown protein
Length = 383
Score = 124 bits (311), Expect = 8e-29
Identities = 112/347 (32%), Positives = 154/347 (44%), Gaps = 76/347 (21%)
Query: 48 FNTAISHSTPPSSSSHPSKFFHLSSKNPTFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLF 107
+N+ + S P S + + S P K+AFLFL DL +W+ FF+ F
Sbjct: 46 YNSFTTLSFPLSVARSQTPLHKYSGDRP--KLAFLFLARRDLPLDFMWDRFFKGVDHANF 103
Query: 108 NVYVHSDPRV--NLTLLRSSNNYNPIFKFISSKKTYRASPTLISATRRLLASAILDDASN 165
++Y+HS P N RS YN + +S K ++I A R LLASA L+D SN
Sbjct: 104 SIYIHSVPGFVFNEETTRSQYFYNR--QLNNSIKVVWGESSMIEAERLLLASA-LEDHSN 160
Query: 166 AYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLTDSESTQFGVRLKYKSFIEIINNGPRLWK 225
F++LS C PL+ F YIYK L SP +SF++
Sbjct: 161 QRFVLLSDRCAPLYDFGYIYKYLISSP------------------RSFVDSF-------- 194
Query: 226 RYTARGRYA--MMPEVPFEKFRVGSQFFTLTRKHALVVVKDRTLWRKFKVPCYR------ 277
+T RY+ M P +P EK+R GSQ+ L R HA V+V D ++ FK C R
Sbjct: 195 LHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFPVFKEFCKRCPPLGT 254
Query: 278 ----------DDECYPEEHYFPTLLSMEDSDG-----VTGYTLTNVNWT--GTVNGHPHT 320
C P+EHY TLL+M+ + YT+ NV+ T + HP T
Sbjct: 255 NEAWLFLKQKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTVWNVSGTKYEAKSWHPVT 314
Query: 321 YQPEEVSPELILRLRKSTN----SES--------------FLFARKF 349
+ E PE I ++K + SES FLFARKF
Sbjct: 315 FTLENSGPEEIKEIKKIDHVYYESESRTEWCKADSKPVPCFLFARKF 361
>At1g10880 hypothetical protein
Length = 651
Score = 123 bits (308), Expect = 2e-28
Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 48/320 (15%)
Query: 23 APAILPPHPSPIPISPTDELDDINL-FNTAISHSTPPSSSSHPSKFFHLSSKNPTFKIAF 81
+P++ PP PSP P S + D L + A++ +P + +HP K+AF
Sbjct: 76 SPSLSPP-PSPSPRSSGSNIADEELMWRAAMAPRSPMKNETHP-------------KVAF 121
Query: 82 LFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISSKKTY 141
+FLT +L +PLW +FF+ +++YVH+ P SS Y K I SK
Sbjct: 122 MFLTRWNLPLSPLWEMFFKGHEG-FYSIYVHTSPEFTQEPPESSVFYK---KRIPSKAVE 177
Query: 142 RASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLTDSES 201
+++ A +RL++ A+L+ SNA F++LS+ CIPL +F IY L S
Sbjct: 178 WGKCSMMDAEKRLISHALLEP-SNARFVLLSETCIPLFNFTTIYTYLTRST--------- 227
Query: 202 TQFGVRLKYKSFIEIINNGPRLWKRYTARGRYA--MMPEVPFEKFRVGSQFFTLTRKHAL 259
+SF+ ++ R RGRY M+P V +R G+Q+F ++R+ A
Sbjct: 228 ---------RSFLGSFDD-----PRPMGRGRYTPKMLPHVSLSDWRKGNQWFEISRRVAA 273
Query: 260 VVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNWTGTVNGHPH 319
+V DR + FK C CY +EHY PTL++ + + T+T V+W+ HP
Sbjct: 274 EIVSDRRYYAVFKDHC--RPPCYIDEHYLPTLVNKICPEMNSNRTVTWVDWS-RGGSHPA 330
Query: 320 TYQPEEVSPELILRLRKSTN 339
+ +++ + R+R +N
Sbjct: 331 RFVRKDIRVGFLDRIRFGSN 350
>At5g14550 putative protein
Length = 364
Score = 115 bits (287), Expect = 5e-26
Identities = 94/303 (31%), Positives = 138/303 (45%), Gaps = 57/303 (18%)
Query: 78 KIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVHSDPRVNLTLLRSSNNYNPIFKFISS 137
+IAFLF+ L +W+ FF+ K F++YVHS P L + + Y + S
Sbjct: 65 QIAFLFIARNRLPLEFVWDAFFKGEDGK-FSIYVHSRPGFVLNEATTRSKYFLDRQLNDS 123
Query: 138 KKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPTFDLT 197
+ T+I A R LL A L D+ N F+ LS CIPL+SF Y Y + +PT
Sbjct: 124 IQVDWGESTMIEAERVLLRHA-LRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTPT---- 178
Query: 198 DSESTQFGVRLKYKSFIEIINNGPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFTLTRKH 257
SF++ + RY R M P +P +R GSQ+ L RKH
Sbjct: 179 --------------SFVDSFADTKD--SRYNPR----MNPIIPVRNWRKGSQWVVLNRKH 218
Query: 258 ALVVVKDRTLWRKFKVPC-----YRDDECYPEEHYFPTLLSMEDSDG-VTGYTLTNVNWT 311
A +VV D +++ F+ C +++ C P+EHY TLLS + D +T +LT+ W
Sbjct: 219 AEIVVNDTSVFPMFQQHCRPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWD 278
Query: 312 GTVN-------GHPHTYQPEEVSPELILRLR------------------KSTNSESFLFA 346
+ + HP TY+ + +P+LI ++ K S FLFA
Sbjct: 279 LSSSKSNERRGWHPMTYKFSDATPDLIQSIKGIDNINYETEYRREWCSSKGKPSPCFLFA 338
Query: 347 RKF 349
RKF
Sbjct: 339 RKF 341
>At1g73810 unknown protein (At1g73810)
Length = 418
Score = 106 bits (264), Expect = 2e-23
Identities = 95/304 (31%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 76 TFKIAFLFLTNTDLHFTPLWNLFFQTTPSKLFNVYVH-SDPRVNLTLLRSSNNYNPIFKF 134
T K AF+FLT L LW FF+ LF++Y+H SDP + +P ++
Sbjct: 145 TKKAAFMFLTRGKLPLAKLWERFFKGHEG-LFSIYIHTSDP---FYFDDHTPETSPFYRR 200
Query: 135 -ISSKKTYRASPTLISATRRLLASAILDDASNAYFIVLSQYCIPLHSFDYIYKSLFLSPT 193
I SK+ ++++A RRLLA+A+LD A N F++LS+ IPL +F IY L S
Sbjct: 201 RIPSKEVGWGMVSMVAAERRLLANALLD-AGNHRFVLLSESDIPLFNFSTIYSYLINSQ- 258
Query: 194 FDLTDSESTQFGVRLKYKSFIEIIN-NGPRLWKRYTARGRY--AMMPEVPFEKFRVGSQF 250
S++++ + GP RGRY M P + +R GSQ+
Sbjct: 259 -----------------HSYVDVYDLPGP------AGRGRYNRRMSPVISRTNWRKGSQW 295
Query: 251 FTLTRKHALVVVKDRTLWRKFKVPCYRDDECYPEEHYFPTLLSMEDSDGVTGYTLTNVNW 310
F + R+ AL VV D T + F+ C + CY +EHY T + +LT +W
Sbjct: 296 FEIDREVALAVVSDTTYFPVFEKYCLWN--CYADEHYLSTFVHAMFPGKNANRSLTWTDW 353
Query: 311 TGTVNGHPHTYQPEEVSPELILRLRK---------STNSESFLFARKFVPDCLEPLMGIA 361
+ HP Y V+ E + R+R + + +LFARKF L+ L+ A
Sbjct: 354 SRR-GPHPRKYTRRSVTGEFLRRVRNREQGCVYNGKKSEKCYLFARKFDGSTLDKLLYFA 412
Query: 362 KSVI 365
SV+
Sbjct: 413 HSVM 416
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.323 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,782,307
Number of Sequences: 26719
Number of extensions: 405537
Number of successful extensions: 1342
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 47
length of query: 368
length of database: 11,318,596
effective HSP length: 101
effective length of query: 267
effective length of database: 8,619,977
effective search space: 2301533859
effective search space used: 2301533859
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Medicago: description of AC133862.6