BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC133780.7 + phase: 0 
         (192 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g14030 unknown protein                                             241  1e-64
At3g54700 phosphate transport protein                                  33  0.071
At3g60340 palmitoyl-protein thioesterase precursor like                30  0.60
At5g57640 putative protein                                             30  0.79
At2g42460 unknown protein (At2g42460)                                  30  1.0
cox1 -mitochondrial genome- cytochrome c oxidase subunit 1             29  1.3
At3g52100 putative protein                                             28  2.3
At1g47360 polyprotein, putative                                        28  2.3
At2g26840 unknown protein                                              28  3.9
At5g16080 unknown protein                                              27  6.7
At2g13930 putative retroelement pol polyprotein                        27  6.7

>At5g14030 unknown protein
          Length = 195

 Score =  241 bits (616), Expect = 1e-64
 Identities = 118/194 (60%), Positives = 155/194 (79%), Gaps = 2/194 (1%)

Query: 1   MADPISKPLIAFLLIASFLLCSHASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGT 60
           MA  ++K LI+ + +   +  S A+S+VPF+V HKKA+LNRLK+GAERVSV+ DIYNQG+
Sbjct: 1   MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60

Query: 61  STAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIK 120
           S+AYDV+L+D+SW    F V++G TSK+WE+LDAGG+LSH+ ELEAK KGVF G PA++ 
Sbjct: 61  SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120

Query: 121 FRVPTSAALQEAYSTPILPLDVLADRAPEKKFE--WRLLAKYGSLISVISIIVMFVYLVA 178
           FR+PT  ALQEAYSTP+LPLD+LAD+ P K  +   RLLAKYGSL+SVIS++V F+YLVA
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180

Query: 179 TPSKSGAKGSKKKR 192
           TP  + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194


>At3g54700 phosphate transport protein
          Length = 433

 Score = 33.5 bits (75), Expect = 0.071
 Identities = 19/78 (24%), Positives = 33/78 (41%), Gaps = 8/78 (10%)

Query: 121 FRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWRLLAKYGSLISVISI--------IVM 172
           F +  SAA +  +  P   +D LA   P+  + WR++   G+L + ++            
Sbjct: 80  FAIIVSAAFEAKFPAPTYQIDALASTVPQADYVWRIILMVGALPAAMTYYSRSKMPETAR 139

Query: 173 FVYLVATPSKSGAKGSKK 190
           +  LVA  +K  A    K
Sbjct: 140 YTALVAKDAKLAASNMSK 157


>At3g60340 palmitoyl-protein thioesterase precursor like
          Length = 338

 Score = 30.4 bits (67), Expect = 0.60
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)

Query: 9   LIAFLLIASFLLCSHAS--SDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGTSTAYDV 66
           L A +++A  L+C+ AS  S VPFIV H    +    + A     T  + +   S  Y +
Sbjct: 4   LKATIIVA--LICNFASLASSVPFIVLH---GIGDKCSNAGVTQFTELLSDWSGSQGYCL 58

Query: 67  SLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAIIKF 121
            + + SW S    ++   TS   EK+ +   LS  + +   S+G   G  A+I+F
Sbjct: 59  EIGNGSWDSWTMPLLD-QTSVVCEKVKSMPELSDGYSIVGLSQGNMIGR-ALIEF 111


>At5g57640 putative protein
          Length = 226

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 104 LEAKSKGVFAGEPAIIKFRVPTSAALQEAYSTPILPLDVLA 144
           L A+ + + AGEPA+I       + LQE  + PILP +  A
Sbjct: 157 LNAEKEAIMAGEPAVI---ARAFSGLQEENAEPILPAEAAA 194


>At2g42460 unknown protein (At2g42460)
          Length = 299

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 18/59 (30%), Positives = 28/59 (46%)

Query: 111 VFAGEPAIIKFRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWRLLAKYGSLISVISI 169
           +FA  P       PTS A++  Y   +L L    ++ PE   E  L+  Y SLI ++ +
Sbjct: 165 IFAKYPKFADDIKPTSKAVKTVYLKILLGLIKTVNKPPEIFSETELIKAYSSLIDLMEV 223


>cox1 -mitochondrial genome- cytochrome c oxidase subunit 1
          Length = 527

 Score = 29.3 bits (64), Expect = 1.3
 Identities = 14/39 (35%), Positives = 19/39 (47%)

Query: 148 PEKKFEWRLLAKYGSLISVISIIVMFVYLVATPSKSGAK 186
           P+    W  L+ +GS ISV+ I   FV +  T S    K
Sbjct: 446 PDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNK 484


>At3g52100 putative protein
          Length = 763

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 19/108 (17%)

Query: 69  SDDSWTSDLFSVISGT--TSKTWEKLDAGGVLSHTFEL--------EAKSKGVFAGEPAI 118
           SDDSW   + S + G   TSK    L+ G V   T EL          K K     E  +
Sbjct: 637 SDDSWEKGVVSEVGGAGGTSKLMVTLENGKV--KTVELGKQGVRFVPQKQKRTRTEEKKM 694

Query: 119 IK--FRVPTSAALQEAYSTPILPLDVLADRAPE-----KKFEWRLLAK 159
           ++  F +  SAA    Y  PI  L V  +   E     + + WRL  +
Sbjct: 695 LQLFFTIAFSAAPLTLYIPPIRCLTVFVETMEEMGMEGRVYSWRLFPR 742


>At1g47360 polyprotein, putative
          Length = 1182

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 43  KTGAERVSVTIDIYNQGTSTAYDVSLSDDSWTSDL 77
           K  AE  S  + + N+  STA D  L ++ WT  L
Sbjct: 562 KFWAEAASTAVYLINRSPSTALDFDLPEEKWTGAL 596


>At2g26840 unknown protein
          Length = 273

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 11/128 (8%)

Query: 60  TSTAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAII 119
           T+ A D +L  + W   L S+ S     T E  ++  ++    +L        +G  A++
Sbjct: 48  TTKAIDAALMKEKWLDSL-SLTSQDEDTTPENAESSCIIGIDPDL--------SGALALL 98

Query: 120 KFRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWRLLAKYGSLISVISIIVMFVYLVAT 179
           KF    S++  + Y TP +P  VL  +   K+ + + + +    + V S   +++     
Sbjct: 99  KFDHLGSSSFAQVYDTPHIP--VLVGKRVRKRLDAKSIVQLIQSLDVPSGSRVYIEQSNP 156

Query: 180 PSKSGAKG 187
             K G +G
Sbjct: 157 FPKDGKQG 164


>At5g16080 unknown protein
          Length = 344

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 51 VTIDIYNQGTSTAYDVSLSDDSWT 74
          V+  I+    +TA+D+ LS+D+WT
Sbjct: 53 VSPTIHPSSKATAFDIKLSNDTWT 76


>At2g13930 putative retroelement pol polyprotein
          Length = 1335

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 43  KTGAERVSVTIDIYNQGTSTAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTF 102
           K  AE  S  + + N+  STA +  L ++ WT  L  + S         L   G L++  
Sbjct: 601 KFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPDLSS---------LRKFGCLAYIH 651

Query: 103 ELEAK-----SKGVFAGEPAIIK 120
             + K      KG+F   P  +K
Sbjct: 652 ADQGKLNPRSKKGIFTSYPEGVK 674


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,065,282
Number of Sequences: 26719
Number of extensions: 156042
Number of successful extensions: 385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 377
Number of HSP's gapped (non-prelim): 11
length of query: 192
length of database: 11,318,596
effective HSP length: 94
effective length of query: 98
effective length of database: 8,807,010
effective search space: 863086980
effective search space used: 863086980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)