BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC131240.3 + phase: 0 
         (562 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g38180 unknown protein (At4g38180)                                 296  3e-80
At3g06250 unknown protein                                             231  1e-60
At4g15090 unknown protein                                             230  2e-60
At1g76320 putative phytochrome A signaling protein                    228  7e-60
At5g18960 FAR1 - like protein                                         225  6e-59
At2g27110 Mutator-like transposase                                    219  4e-57
At3g22170 far-red impaired response protein, putative                 206  3e-53
At1g80010 hypothetical protein                                        204  8e-53
At1g52520 F6D8.26                                                     189  5e-48
At1g10240 unknown protein                                             187  2e-47
At5g28530 far-red impaired response protein (FAR1) - like             180  2e-45
At2g32250 Mutator-like transposase                                    177  1e-44
At4g38170 hypothetical protein                                        175  7e-44
At4g19990 putative protein                                            160  1e-39
At4g08610 predicted transposon protein                                 75  1e-13
At4g09380 putative protein                                             74  3e-13
At5g27190 putative protein                                             70  3e-12
At3g47310 putative protein                                             69  7e-12
At4g28970 putative protein                                             69  9e-12
At1g36090 hypothetical protein                                         68  1e-11

>At4g38180 unknown protein (At4g38180)
          Length = 788

 Score =  296 bits (757), Expect = 3e-80
 Identities = 166/545 (30%), Positives = 278/545 (50%), Gaps = 10/545 (1%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRNI-NGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   E A  FYN Y    GF+ R S   R+  +G ++Q+ F+C +EG R      +  R+
Sbjct: 79  FESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDRE 138

Query: 64  -REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDK 122
            +  + ++R GC+A + V +   S +W +  F  DHNH  V       L +HR++S   K
Sbjct: 139 IKRPRTITRVGCKASLSVKMQ-DSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAK 197

Query: 123 YQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRW-NSDAEQAVNFL 181
             ++T++ +G+   RI      + GG   VG+   D  N  R  R +    + +  +++L
Sbjct: 198 TLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEGEIQLLLDYL 257

Query: 182 KHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVI 241
           + M++ +   F+      D S+ ++FW D  + MD++ FGD + FD TY+  +Y  P   
Sbjct: 258 RQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAP 317

Query: 242 FSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKV 301
           F+GVNHH Q I+FG A I +ETE ++VWL   ++ AM    PVS+ TD D  +R AI  V
Sbjct: 318 FTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHV 377

Query: 302 FPEAHHRLCAWHLIRNATSN-----IKNLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFG 356
           FP A HR C WH+++          +K+  F S F  C+     V+ F+R W  L+ ++ 
Sbjct: 378 FPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFERCWFSLLDKYE 437

Query: 357 LEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQF 416
           L ++ W+  +Y  R+ W   + R  FFA    T R + ++S F  Y++A TNL  FF+ +
Sbjct: 438 LRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLY 497

Query: 417 FRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDV 476
            + L     +E++AD+ + +   V++T    +E+ A +LYT+ +F  F++ L     F  
Sbjct: 498 EKALESRLEKEVKADYDTMNSPPVLKTP-SPMEKQASELYTRKLFMRFQEELVGTLTFMA 556

Query: 477 HIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFLG 536
                +G +  + V +Y        V +    +   C+C+  E  GI C H++ V +   
Sbjct: 557 SKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHILAVFRVTN 616

Query: 537 IVNLP 541
           ++ LP
Sbjct: 617 LLTLP 621


>At3g06250 unknown protein
          Length = 764

 Score =  231 bits (588), Expect = 1e-60
 Identities = 145/545 (26%), Positives = 253/545 (45%), Gaps = 57/545 (10%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN-INGEVVQQTFLCHREGIREEKYINSTSRK 63
           F     A  FY  Y    GF  R  +L R+ ++G +  + F+C +EG +           
Sbjct: 196 FNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHP--------- 246

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRK-----MS 118
                 SR GC A +R+     S  W +   + DHNH     K    +          + 
Sbjct: 247 ------SRMGCGAYMRIKRQ-DSGGWIVDRLNKDHNHDLEPGKKNAGMKKITDDVTGGLD 299

Query: 119 EYDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAV 178
             D  ++N +  + IS+TR +            +G   ++ Y                 +
Sbjct: 300 SVDLIELNDL-SNHISSTREN-----------TIG---KEWY--------------PVLL 330

Query: 179 NFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTP 238
           ++ +   ++D   F+   + ++GS   +FW D  S    S FGD + FD +Y+K  Y+ P
Sbjct: 331 DYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSVP 390

Query: 239 LVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAI 298
              F G NHH Q ++ G A++ DE+++ + WL + ++ AM G+ P S++ D DL ++ A+
Sbjct: 391 FATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAV 450

Query: 299 RKVFPEAHHRLCAWHLIRNATSNIKNL--HFVSKFKDCLLGDVDVDVFQRKWEELVTEFG 356
            +VFP  HHR  AW +      N+++    F  +++ CL        F   W  LV ++G
Sbjct: 451 AQVFPGTHHRFSAWQIRSKERENLRSFPNEFKYEYEKCLYQSQTTVEFDTMWSSLVNKYG 510

Query: 357 LEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQF 416
           L +N W+ E+Y+KR+ W  A+ R  FF G       +     +G  +++LT+L +F  ++
Sbjct: 511 LRDNMWLREIYEKREKWVPAYLRASFFGGIHVDGTFDPF---YGTSLNSLTSLREFISRY 567

Query: 417 FRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDV 476
            + L   R  E + DF+S +    +QT+   +E    +LYT TIFR+F+  L ++  +  
Sbjct: 568 EQGLEQRREEERKEDFNSYNLQPFLQTK-EPVEEQCRRLYTLTIFRIFQSELAQSYNYLG 626

Query: 477 HIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFLG 536
               + G+I   +VR+   ++ +  V++    L   C+C+  E  G+ C H++ V   L 
Sbjct: 627 LKTYEEGAISRFLVRKCGNENEKHAVTFSASNLNASCSCQMFEYEGLLCRHILKVFNLLD 686

Query: 537 IVNLP 541
           I  LP
Sbjct: 687 IRELP 691



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 28/97 (28%), Positives = 41/97 (41%), Gaps = 17/97 (17%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN-INGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   E A  +YN Y    GF  R  +L R+  +G V  + F+C +EG +           
Sbjct: 34  FDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN--------- 84

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNH 100
                 SR GC A +RV     + +W +     +HNH
Sbjct: 85  ------SRTGCPAFIRVQ-RRDTGKWVLDQIQKEHNH 114


>At4g15090 unknown protein
          Length = 768

 Score =  230 bits (586), Expect = 2e-60
 Identities = 136/513 (26%), Positives = 250/513 (48%), Gaps = 16/513 (3%)

Query: 38  EVVQQTFLCHREGIREEKYINSTSRKREHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDD 97
           + +   F C R G+  E   + +S +R     + C     V+   D    +W I  F  D
Sbjct: 32  DFIDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRPD---GKWIIHEFVKD 88

Query: 98  HNHSFVKE-KFERMLPAHRKMSEYDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVG-YN 155
           HNH  +    +   +  + K++E  K  ++ +      T +++   + Q+GGY+N+G   
Sbjct: 89  HNHELLPALAYHFRIQRNVKLAE--KNNIDILHAVSERTKKMYVEMSRQSGGYKNIGSLL 146

Query: 156 RRDMYNEQRKRRMRW--NSDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVS 213
           + D+ ++  K R       D++  + + K +  ++   F+   ++ D  L++LFW D  S
Sbjct: 147 QTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKS 206

Query: 214 CMDYSIFGDVLAFDATYKKIKYNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKI 273
             DY  F DV++FD TY K     PL +F GVNHH+Q ++ G A++ DE+ +T+VWL+K 
Sbjct: 207 RDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKT 266

Query: 274 FVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHLIRNAT---SNIKNLH--FV 328
           ++ AMGG+ P  ++TD D  + +A+ ++ P   H    WH++       S++   H  F+
Sbjct: 267 WLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSHVMKRHENFL 326

Query: 329 SKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRT 388
            KF  C+      D F  +W ++V++FGLE + W+L +++ R+ W        F AG  T
Sbjct: 327 LKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPTFMSDVFLAGMST 386

Query: 389 TSRCEGLHSEFGKYVSALTNLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHL 448
           + R E ++S F KY+     L +F +Q+   L      E  ADF + H    +++     
Sbjct: 387 SQRSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEESVADFDTCHKQPALKSP-SPW 445

Query: 449 ERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHR 508
           E+     YT TIF+ F+  +            ++ ++    V+   + D ++ V++ + +
Sbjct: 446 EKQMATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFRVQDCEKDD-DFLVTWSKTK 504

Query: 509 LVFECTCKRLETLGIACEHVMCVVKFLGIVNLP 541
               C C+  E  G  C H + +++  G  ++P
Sbjct: 505 SELCCFCRMFEYKGFLCRHALMILQMCGFASIP 537


>At1g76320 putative phytochrome A signaling protein
          Length = 670

 Score =  228 bits (581), Expect = 7e-60
 Identities = 150/545 (27%), Positives = 249/545 (45%), Gaps = 24/545 (4%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN-INGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   E A++FY  Y    GF   K    R+  + E +   F C R G +++       R 
Sbjct: 3   FETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINPRA 62

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDKY 123
                  + GC+A + V       +WY+  F  +HNH  + E+      +HR        
Sbjct: 63  SP-----KIGCKASMHVKRRPDG-KWYVYSFVKEHNHDLLPEQ-AHYFRSHRNTELVKSN 115

Query: 124 QMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRR--MRWNSDAEQAVNFL 181
                R+     T            Y ++ +    M N+  K R  +    DAE  + FL
Sbjct: 116 DSRLRRKKNTPLTD-----CKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFL 170

Query: 182 KHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVI 241
             M  ++   F+      D  L+++FW D     DY  F DV++F+ +Y   KY  PLV+
Sbjct: 171 MRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVL 230

Query: 242 FSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKV 301
           F GVNHH Q ++ G  ++ D+T  TYVWL++ ++ AMGG+ P  ++TD + +++ AI  V
Sbjct: 231 FVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAV 290

Query: 302 FPEAHHRLCAWHLIRNATSNIKNLH-----FVSKFKDCLLGDVDVDVFQRKWEELVTEFG 356
            PE  H  C WH++     N+         F+ K   C+      + F R+W +L+ +F 
Sbjct: 291 LPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLIDKFH 350

Query: 357 LEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQF 416
           L + PWM  +Y++RK WA    RG  FAG     R E ++S F +YV   T+L +F + +
Sbjct: 351 LRDVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSLKEFLEGY 410

Query: 417 FRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDV 476
              L      E +ADF + H    +++     E+    +Y+  IFR F+  LE       
Sbjct: 411 GLMLEDRYEEEAKADFDAWHEAPELKSP-SPFEKQMLLVYSHEIFRRFQ--LEVLGAAAC 467

Query: 477 HIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFLG 536
           H+  ++     + V+ +  +  ++ V + E +    C+C+  E  G  C H + V++  G
Sbjct: 468 HLTKESEEGTTYSVKDFDDEQ-KYLVDWDEFKSDIYCSCRSFEYKGYLCRHAIVVLQMSG 526

Query: 537 IVNLP 541
           +  +P
Sbjct: 527 VFTIP 531


>At5g18960 FAR1 - like protein
          Length = 788

 Score =  225 bits (573), Expect = 6e-59
 Identities = 151/548 (27%), Positives = 250/548 (45%), Gaps = 60/548 (10%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN-INGEVVQQTFLCHREGIREEKYINSTSRK 63
           F     A  FY  Y    GF  R  +L R+ ++G +  + F+C REG +           
Sbjct: 217 FGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHP--------- 267

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDKY 123
                 SR GC A +R+     S  W +   + DHNH     K                 
Sbjct: 268 ------SRMGCGAYMRIKRQ-DSGGWIVDRLNKDHNHDLEPGK----------------- 303

Query: 124 QMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAVNFL-K 182
                  +G+      G      GG  +V     + +     ++ R N   ++    L  
Sbjct: 304 ----KNDAGMKKIPDDG-----TGGLDSVDLIELNDFGNNHIKKTRENRIGKEWYPLLLD 354

Query: 183 HMSSK--DDMMFWRHTVHAD---GSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNT 237
           +  S+  +DM F+ + V  D   GS   +FW D  +    S FGD + FD +Y+K  Y+ 
Sbjct: 355 YFQSRQTEDMGFF-YAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSYSV 413

Query: 238 PLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNA 297
           P     G NHH Q ++ G A++ DE+++ ++WL + ++ AM G+ P S++ D DL ++ A
Sbjct: 414 PFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQA 473

Query: 298 IRKVFPEAHHRLCAWHLIRNATSNIKNLHFVSKFK----DCLLGDVDVDVFQRKWEELVT 353
           + +VFP AHHR  AW +      N+  + F S+FK     C+     +  F   W  L+ 
Sbjct: 474 LVQVFPGAHHRYSAWQIREKERENL--IPFPSEFKYEYEKCIYQTQTIVEFDSVWSALIN 531

Query: 354 EFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFF 413
           ++GL ++ W+ E+Y++R+ W  A+ R  FFAG       E     FG  + ALT L +F 
Sbjct: 532 KYGLRDDVWLREIYEQRENWVPAYLRASFFAGIPINGTIEPF---FGASLDALTPLREFI 588

Query: 414 QQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACR 473
            ++ + L   R  E + DF+S +    +QT+   +E    +LYT T+FR+F+  L ++  
Sbjct: 589 SRYEQALEQRREEERKEDFNSYNLQPFLQTK-EPVEEQCRRLYTLTVFRIFQNELVQSYN 647

Query: 474 FDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVK 533
           +      + G+I   +VR+   +  +  V++    L   C+C+  E  G+ C H++ V  
Sbjct: 648 YLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFN 707

Query: 534 FLGIVNLP 541
            L I  LP
Sbjct: 708 LLDIRELP 715



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 17/97 (17%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN-INGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   E A  FYN Y    GF  R  +L R+  +G V  + F+C +EG +           
Sbjct: 49  FDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN--------- 99

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNH 100
                 SR GC A +RV     + +W +     +HNH
Sbjct: 100 ------SRTGCTAFIRVQ-RRDTGKWVLDQIQKEHNH 129


>At2g27110 Mutator-like transposase
          Length = 851

 Score =  219 bits (557), Expect = 4e-57
 Identities = 143/542 (26%), Positives = 247/542 (45%), Gaps = 35/542 (6%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRNINGEVVQQTFLCHREGIREEKYINSTSRKR 64
           F   + A  FY+ Y    GF    S+L+   +G V  + F+C            S+S KR
Sbjct: 55  FNSEKEAKSFYDEYSRQLGFT---SKLLPRTDGSVSVREFVC------------SSSSKR 99

Query: 65  EHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDKYQ 124
             + LS   C A VR+ +    ++W +  F  +H H          L   R  +  +K  
Sbjct: 100 SKRRLSE-SCDAMVRIELQ-GHEKWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEK-- 155

Query: 125 MNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAVNFLKHM 184
             +  Q G++      Y +  A      G     M    ++   R   DA   + + K M
Sbjct: 156 --SSYQEGVNVPSGMMYVSMDANSR---GARNASMATNTKRTIGR---DAHNLLEYFKRM 207

Query: 185 SSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSG 244
            +++   F+   +  D  + ++FW D  S + Y+ FGD +  D  Y+  ++  P   F+G
Sbjct: 208 QAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTG 267

Query: 245 VNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPE 304
           VNHH Q+I+FG A+I DE++ +++WL K F+ AM  + PVS++TD D +++ A  +VFP 
Sbjct: 268 VNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQVFPG 327

Query: 305 AHHRLCAWHLIRNATSNIKNL-----HFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEE 359
           A H +  W ++R     + ++      F  +  +C+     ++ F+  W  ++ ++ L  
Sbjct: 328 ARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGR 387

Query: 360 NPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQFFRW 419
           + W+  +Y  R  W   +FR  FFA    +    G  S F  YV+  T L  FF+ + R 
Sbjct: 388 HEWLNSLYNARAQWVPVYFRDSFFAAVFPSQGYSG--SFFDGYVNQQTTLPMFFRLYERA 445

Query: 420 LNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDVHIV 479
           +      EIEAD  + +   V++T    +E  A  L+T+ IF  F++ L        + +
Sbjct: 446 MESWFEMEIEADLDTVNTPPVLKTP-SPMENQAANLFTRKIFGKFQEELVETFAHTANRI 504

Query: 480 SQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFLGIVN 539
             +G+     V  +   +  + V++C   +   C+C+  E  GI C HV+ V     I+ 
Sbjct: 505 EDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILT 564

Query: 540 LP 541
           LP
Sbjct: 565 LP 566


>At3g22170 far-red impaired response protein, putative
          Length = 814

 Score =  206 bits (524), Expect = 3e-53
 Identities = 146/558 (26%), Positives = 255/558 (45%), Gaps = 49/558 (8%)

Query: 5   FPDREVAFMFYNWYGCFHGF--AARKSRLIRNINGEVVQQTFLCHREGIREEKYINSTSR 62
           F     A+ FY  Y    GF  A + SR  +    E +   F C R G + E Y  S +R
Sbjct: 76  FESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTR-EFIDAKFACSRYGTKRE-YDKSFNR 133

Query: 63  KREH------------KPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERM 110
            R              +  ++  C+A + V       +W I        HSFV+E    +
Sbjct: 134 PRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDG-KWVI--------HSFVREHNHEL 184

Query: 111 LPAHRKMSEYDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRW 170
           LPA + +SE               T +I+   A Q   Y+ V   + D  +   K R   
Sbjct: 185 LPA-QAVSE--------------QTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLS 229

Query: 171 --NSDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDA 228
               D +  ++FL  M S +   F+   +  D  ++++FW D  S  +Y  F DV++ D 
Sbjct: 230 VETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDT 289

Query: 229 TYKKIKYNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVIT 288
           TY + KY  PL IF GVN H Q ++ G A+I DE+  TY WL++ ++ A+GG+ P  +IT
Sbjct: 290 TYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKVLIT 349

Query: 289 DGDLSMRNAIRKVFPEAHHRLCAWHLIRNATSNIKNL-----HFVSKFKDCLLGDVDVDV 343
           + D+ M + + ++FP   H L  WH++   + N+  +     +F+ KF+ C+      + 
Sbjct: 350 ELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKFEKCIYKSGKDED 409

Query: 344 FQRKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYV 403
           F RKW + +  FGL+++ WM+ +Y+ RK WA  +      AG  T+ R + +++ F KY+
Sbjct: 410 FARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADSINAFFDKYM 469

Query: 404 SALTNLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRL 463
              T++ +F + +   L      E +AD S               E+S  ++YT  +F+ 
Sbjct: 470 HKKTSVQEFVKVYDTVLQDRCEEEAKAD-SEMWNKQPAMKSPSPFEKSVSEVYTPAVFKK 528

Query: 464 FRKVLERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGI 523
           F+  +  A        +++ +     V+ +     ++ V++ + +    C C+  E  G 
Sbjct: 529 FQIEVLGAIACSPREENRDATCSTFRVQDFENNQ-DFMVTWNQTKAEVSCICRLFEYKGY 587

Query: 524 ACEHVMCVVKFLGIVNLP 541
            C H + V++   + ++P
Sbjct: 588 LCRHTLNVLQCCHLSSIP 605


>At1g80010 hypothetical protein
          Length = 696

 Score =  204 bits (520), Expect = 8e-53
 Identities = 157/559 (28%), Positives = 257/559 (45%), Gaps = 33/559 (5%)

Query: 5   FPDREVAFMFYNWYGCFHGFAAR-KSRLIRNINGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   + A+ FYN Y    GFA R KS   +  + E       C+ +G +  K  ++ SR+
Sbjct: 72  FESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFKLLK--DAHSRR 129

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDKY 123
           +E    +R GCQA +R+ + +   RW +     DHNHSF  ++      +H+K S     
Sbjct: 130 KE----TRTGCQAMIRLRL-IHFDRWKVDQVKLDHNHSFDPQRAHNS-KSHKKSSSSASP 183

Query: 124 QMNTMRQSG----ISTTRIHGYFASQAGGYQNVGYNRR-------DMYNEQRKRRMRWNS 172
              T  +      + T +++   A           +         D +   R+  +R   
Sbjct: 184 ATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLELRGGF 243

Query: 173 DAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKK 232
            A Q   F   +SS +    +   +  DGSL+++FW D  +   YS FGDVL FD T   
Sbjct: 244 RALQDFFFQIQLSSPN--FLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLS 301

Query: 233 IKYNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDL 292
             Y  PLV F G+NHH  +I+ G  ++ D++ +TYVWL + ++  M G+ P   IT+   
Sbjct: 302 NAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQCK 361

Query: 293 SMRNAIRKVFPEAHHRLCAWHLIRNATSNIKNLH----FVSKFKDCLLGDVDVDVFQRKW 348
           +MR A+ +VFP AHHRL   H++ N   ++  L     F       + G + V+ F+  W
Sbjct: 362 AMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMALNRVVYGCLKVEEFETAW 421

Query: 349 EELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCE-GLHSEFGKYVSALT 407
           EE++  FG+  N  + +M+Q R++WA  + +  F AG  T           F  YV   T
Sbjct: 422 EEMIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIFSGYVHENT 481

Query: 408 NLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFR-K 466
           +L +F + +  +L+    RE   D  S      ++T H + E    K++T  IFR F+ +
Sbjct: 482 SLREFLEGYESFLDKKYTREALCDSESLKLIPKLKTTHPY-ESQMAKVFTMEIFRRFQDE 540

Query: 467 VLERACRFDVHIVSQNGSIHNHIVRRYPRQDI-EWTVSY---CEHRLVFECTCKRLETLG 522
           V   +  F V  V  NGS  +++V+      + ++ V Y      ++   C C      G
Sbjct: 541 VSAMSSCFGVTQVHSNGSASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCVCGGFSFNG 600

Query: 523 IACEHVMCVVKFLGIVNLP 541
             C HV+ ++   G+  +P
Sbjct: 601 YQCRHVLLLLSHNGLQEVP 619


>At1g52520 F6D8.26
          Length = 703

 Score =  189 bits (479), Expect = 5e-48
 Identities = 142/551 (25%), Positives = 237/551 (42%), Gaps = 30/551 (5%)

Query: 5   FPDREVAFMFYNWYGCFHGFAAR-KSRLIRNINGEVVQQTFLCHREGIREEKYINSTSRK 63
           F   + A+ +YN Y    GF  R K+   +  + E       C  +G    K IN  +R 
Sbjct: 91  FESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGF---KRINDVNRV 147

Query: 64  REHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSE--YD 121
           R+    +R GC A +R+   V S+RW +     DHNH    + ++ +    + +S    D
Sbjct: 148 RKE---TRTGCPAMIRMR-QVDSKRWRVVEVTLDHNHLLGCKLYKSVKRKRKCVSSPVSD 203

Query: 122 KYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAVNFL 181
              +   R   +         ++    +QN      D+ N +R        D+    N+ 
Sbjct: 204 AKTIKLYRACVVDNGSNVNPNSTLNKKFQN-STGSPDLLNLKR-------GDSAAIYNYF 255

Query: 182 KHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVI 241
             M   +   F+   V+ +G L+++FW D  S +  S FGDV+  D++Y   K+  PLV 
Sbjct: 256 CRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVT 315

Query: 242 FSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKV 301
           F+GVNHH ++ +     +  ET ++Y WLLK+++  M  + P +++TD    +  AI +V
Sbjct: 316 FTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVM-KRSPQTIVTDRCKPLEAAISQV 374

Query: 302 FPEAHHRLCAWHLIRNATSNIKNLH----FVSKFKDCLLGDVDVDVFQRKWEELVTEFGL 357
           FP +H R    H++R     +  LH        F   +   + V  F+  W  +V  FG+
Sbjct: 375 FPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRKAFTKAVYETLKVVEFEAAWGFMVHNFGV 434

Query: 358 EENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHDFFQQFF 417
            EN W+  +Y++R  WA  + +  FFAG       E L   F +YV   T L +F  ++ 
Sbjct: 435 IENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQTPLKEFLDKYE 494

Query: 418 RWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFR-KVLERACRFDV 476
             L      E  +D  S   +          E    ++YT+ +F+ F+ +V E    F  
Sbjct: 495 LALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQIEVEEMYSCFST 554

Query: 477 HIVSQNGSIHNHIVRRYPRQDI------EWTVSYCEHRLVFECTCKRLETLGIACEHVMC 530
             V  +G     +V+   R +       ++ V Y        C C      G  C H +C
Sbjct: 555 TQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFNFYGYLCRHALC 614

Query: 531 VVKFLGIVNLP 541
           V+ F G+  +P
Sbjct: 615 VLNFNGVEEIP 625


>At1g10240 unknown protein
          Length = 680

 Score =  187 bits (474), Expect = 2e-47
 Identities = 133/544 (24%), Positives = 248/544 (45%), Gaps = 28/544 (5%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRN--INGEVVQQTFLCHREGIREEKYINSTSR 62
           F   + A+ FY+ +    GF+ R+ R      +   + ++ F+CHR G    K ++    
Sbjct: 54  FLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKP 113

Query: 63  KREHKPLSRCGCQAKVRVH--IDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEY 120
           +R  +  SRCGCQA +R+    ++ S  W +  F + HNH  ++    R LPA+R +S+ 
Sbjct: 114 QRNRRS-SRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDA 172

Query: 121 DKYQMNTMRQSGISTTRIHGYFASQA---GGYQNVGYNRRDMYNEQRKRRMRWNSDAEQA 177
           DK ++    ++GIS  ++      +     G+  + +  +D+ N  +  +     D  + 
Sbjct: 173 DKSRILMFSKTGISVQQMMRLLELEKCVEPGF--LPFTEKDVRNLLQSFKKLDPED--EN 228

Query: 178 VNFLKHMSS---KDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIK 234
           ++FL+   S   KD    +  T+ A+  L+++ W    S   Y +FGD + FD T++   
Sbjct: 229 IDFLRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSA 288

Query: 235 YNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSM 294
              PL I+ GVN++     FG  ++ DE   ++ W L+ F   M GK P +++TD ++ +
Sbjct: 289 VEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCL 348

Query: 295 RNAIRKVFPEAHHRLCAWHLIRNATSNIKNLHFVSKFKDC------LLGDVDVDVFQRKW 348
           + AI    P   H LC W ++    S   N     ++ D       L     V+ F+  W
Sbjct: 349 KEAIAGEMPATKHALCIWMVVGKFPSWF-NAGLGERYNDWKAEFYRLYHLESVEEFELGW 407

Query: 349 EELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTN 408
            ++V  FGL  N  +  +Y  R +W+  + R  F AG   T R + +++   +++SA T 
Sbjct: 408 RDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQTR 467

Query: 409 LHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVL 468
           L  F +Q    +++      +     +  +I ++T    +E  A  + T   F   ++ L
Sbjct: 468 LAHFVEQVAVVVDFKDQATEQQTMQQNLQNISLKT-GAPMESHAASVLTPFAFSKLQEQL 526

Query: 469 ERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHV 528
             A  +    + +      ++VR + + D    V +     +  C+C+  E  G  C H 
Sbjct: 527 VLAAHYASFQMDE-----GYLVRHHTKLDGGRKVYWVPQEGIISCSCQLFEFSGFLCRHA 581

Query: 529 MCVV 532
           + V+
Sbjct: 582 LRVL 585


>At5g28530 far-red impaired response protein (FAR1) - like
          Length = 700

 Score =  180 bits (456), Expect = 2e-45
 Identities = 134/559 (23%), Positives = 259/559 (45%), Gaps = 33/559 (5%)

Query: 5   FPDREVAFMFYNWYGCFHGFAARKSRLIRNINGEVVQQTFLCHREGIREEKYINSTSRKR 64
           F   + AF +Y+ +    GF+ RK+R   + N  V ++ F+C+R G  + +   +    R
Sbjct: 76  FTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEHPR 135

Query: 65  EHKPLSRCGCQAKVRVHIDVSS--QRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSEYDK 122
           E K + RCGC  K+ +  +V      WY+  F + HNH  +++   R+LPA+RK+ + D+
Sbjct: 136 ERKSV-RCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQ 194

Query: 123 YQMNTMRQSGISTTRIHGYFASQAGGYQN-VGYNRRDMYNEQR--KRRMRWN-------- 171
            ++  + ++G    RI      + G     + +  +D+ N  R  K+ ++ N        
Sbjct: 195 ERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEKR 254

Query: 172 -SDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATY 230
            SD  + +   K ++ +D    +  T   +  ++++ W  G S   YS+FGDV+ FD +Y
Sbjct: 255 ESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSY 314

Query: 231 KKIKYNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDG 290
           + + Y   L +F G++++ ++++ G  ++ DE+  ++ W L+ FV  M G+ P +++TD 
Sbjct: 315 RSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTDI 374

Query: 291 DLSMRNAIRKVFPEAHHRLCAWHLIRNAT---SNIKNLHFVSKFK---DCLLGDVDVDVF 344
           D  +++AI +  P  +H +   H++       S     H+  +F+   D L    +VD F
Sbjct: 375 DTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHY-EEFRAGFDMLCRAGNVDEF 433

Query: 345 QRKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVS 404
           +++W+ LVT FGL  +     +Y  R  W     R  F A   T+     + S   + V 
Sbjct: 434 EQQWDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVD 493

Query: 405 ALTNLHDFFQQFFRWLNYMR--YREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFR 462
             T +    ++    ++      ++I   F+       +  + H     A  + T   F 
Sbjct: 494 GATCMQLLLEESALQVSAAASLAKQILPRFTYPSLKTCMPMEDH-----ARGILTPYAFS 548

Query: 463 LFRKVLERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLG 522
           + +  +  + ++ V  ++ NG     IV  Y + + E  V +       +C+CK  E  G
Sbjct: 549 VLQNEMVLSVQYAVAEMA-NGPF---IVHHYKKMEGECCVIWNPENEEIQCSCKEFEHSG 604

Query: 523 IACEHVMCVVKFLGIVNLP 541
           I C H + V+      ++P
Sbjct: 605 ILCRHTLRVLTVKNCFHIP 623


>At2g32250 Mutator-like transposase
          Length = 684

 Score =  177 bits (449), Expect = 1e-44
 Identities = 126/550 (22%), Positives = 230/550 (40%), Gaps = 66/550 (12%)

Query: 5   FPDREVAFMFYNWYGCFHGF-----AARKSRLIRNINGEVVQQTFLCHREGIREEKYINS 59
           F  +E A+ FY  Y    GF     A+R+S+     +G+ +     C R G + EK    
Sbjct: 44  FESKEAAYYFYREYARSVGFGITIKASRRSKR----SGKFIDVKIACSRFGTKREKATAI 99

Query: 60  TSRKREHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFERMLPAHRKMSE 119
             R        + GC+A + +      ++W I  F  +HNH    + F            
Sbjct: 100 NPRS-----CPKTGCKAGLHMKRK-EDEKWVIYNFVKEHNHEICPDDF------------ 141

Query: 120 YDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRMRWNSDAEQAVN 179
                                        Y +V    +       K+ ++   + E    
Sbjct: 142 -----------------------------YVSVRGKNKPAGALAIKKGLQLALEEEDLKL 172

Query: 180 FLKH---MSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYN 236
            L+H   M  K    F+     +D  ++++FW D  +  DY  F DV+ FD  Y +  Y 
Sbjct: 173 LLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVRNGYR 232

Query: 237 TPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRN 296
            P   F GV+HH Q ++ G A+IG+ +E TY WL + +++A+GG+ P  +ITD D  + +
Sbjct: 233 IPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLLSD 292

Query: 297 AIRKVFPEAHHRLCAWHLIRNATSNI-----KNLHFVSKFKDCLLGDVDVDVFQRKWEEL 351
            + +VFP+  H  C W ++   +  +     ++  F+  F +C+      + F+R+W  +
Sbjct: 293 IVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERRWSNM 352

Query: 352 VTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSALTNLHD 411
           + +F L EN W+  +++ RK W   +F G   AG     R   + S F KY+++     D
Sbjct: 353 IGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKYMNSEATFKD 412

Query: 412 FFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERA 471
           FF+ + ++L Y    E + D         +++     E+    +YT   F+ F+  +   
Sbjct: 413 FFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSS-LAFEKQLSLIYTDAAFKKFQAEVPGV 471

Query: 472 CRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCV 531
               +    ++G+     +  +  +   + V+     L   C+C   E  G  C+H + V
Sbjct: 472 VSCQLQKEREDGTTAIFRIEDFEERQ-NFFVALNNELLDACCSCHLFEYQGFLCKHAILV 530

Query: 532 VKFLGIVNLP 541
           ++   +  +P
Sbjct: 531 LQSADVSRVP 540


>At4g38170 hypothetical protein
          Length = 531

 Score =  175 bits (443), Expect = 7e-44
 Identities = 96/376 (25%), Positives = 182/376 (47%), Gaps = 11/376 (2%)

Query: 172 SDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYK 231
           S  E  +N+LK    ++    +      +    ++FW D    ++Y+ FGD L FD TY+
Sbjct: 2   SRVEHVLNYLKRRQLENPGFLYA----IEDDCGNVFWADPTCRLNYTYFGDTLVFDTTYR 57

Query: 232 KIK-YNTPLVIFSGVNHHNQSIIFGSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDG 290
           + K Y  P   F+G NHH Q ++FG A+I +E+E ++ WL + +++AM    P S+  + 
Sbjct: 58  RGKRYQVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEP 117

Query: 291 DLSMRNAIRKVFPEAHHRLCAWHLIRNATSNIKNLH-----FVSKFKDCLLGDVDVDVFQ 345
           D  ++ A+ +VF +   R     +       + ++      F S+F +C+        F+
Sbjct: 118 DRLIQVAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFE 177

Query: 346 RKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKYVSA 405
             W+ +V  + +E+N W+  +Y  R+ W     R  F+    T      L+S F  +V A
Sbjct: 178 ASWDSIVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDA 237

Query: 406 LTNLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFR 465
            T +    +Q+ + ++  R +E++AD+ +++   V++T    +E+ A  LYT+  F  F+
Sbjct: 238 STTMQMLIKQYEKAIDSWREKELKADYEATNSTPVMKTP-SPMEKQAASLYTRAAFIKFQ 296

Query: 466 KVLERACRFDVHIVSQNGSIHNHIVRRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIAC 525
           +          +I+S +G+   + V ++       TVS+    +   C+C+  E  GI C
Sbjct: 297 EEFVETLAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIIC 356

Query: 526 EHVMCVVKFLGIVNLP 541
            H++ V     ++ LP
Sbjct: 357 RHILAVFSAKNVLALP 372


>At4g19990 putative protein
          Length = 672

 Score =  160 bits (406), Expect = 1e-39
 Identities = 114/483 (23%), Positives = 212/483 (43%), Gaps = 78/483 (16%)

Query: 5   FPDREVAFMFYNWYGCFHGF-----AARKSRLIRNINGEVVQQTFLCHREGIREE----- 54
           F  +E AF FY  Y    GF     A+R+SR+     G+ +   F+C R G ++E     
Sbjct: 27  FESKEEAFEFYKEYANSVGFTTIIKASRRSRM----TGKFIDAKFVCTRYGSKKEDIDTG 82

Query: 55  ------KYINSTSRKREHKPLSRCGCQAKVRVHIDVSSQRWYIKLFDDDHNHSFVKEKFE 108
                     +  R R ++  S+  C+A + V       RW ++    +HNH    E F 
Sbjct: 83  LGTDGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDG-RWVVRSLVKEHNH----EIFT 137

Query: 109 RMLPAHRKMSEYDKYQMNTMRQSGISTTRIHGYFASQAGGYQNVGYNRRDMYNEQRKRRM 168
               + R++S   K +            +++G    +                   K R 
Sbjct: 138 GQADSLRELSGRRKLE------------KLNGAIVKEV------------------KSRK 167

Query: 169 RWNSDAEQAVNFLKHMSSKDDMMFWRHTVHADGSLQHLFWCDGVSCMDYSIFGDVLAFDA 228
             + D E+ +NF   M S                L+++FW D     DY+ F DV++ D 
Sbjct: 168 LEDGDVERLLNFFTDMQS----------------LRNIFWVDAKGRFDYTCFSDVVSIDT 211

Query: 229 TYKKIKYNTPLVIFSGVNHHNQSIIFG-SAIIGDETEDTYVWLLKIFVEAMGGKLPVSVI 287
           T+ K +Y  PLV F+GVNHH Q ++ G   ++ DE++  +VWL + +++AM G  P  ++
Sbjct: 212 TFIKNEYKLPLVAFTGVNHHGQFLLLGFGLLLTDESKSGFVWLFRAWLKAMHGCRPRVIL 271

Query: 288 TDGDLSMRNAIRKVFPEAHHRLCAWHLIRNATSNIKNL-----HFVSKFKDCLLGDVDVD 342
           T  D  ++ A+ +VFP + H    W  +      + ++       V +  D + G    +
Sbjct: 272 TKHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGHVIRLEKKLVDEINDAIYGSCQSE 331

Query: 343 VFQRKWEELVTEFGLEENPWMLEMYQKRKMWAAAHFRGKFFAGFRTTSRCEGLHSEFGKY 402
            F++ W E+V  F + +N W+  +Y+ R+ W   + +    AG  T  R + ++S   KY
Sbjct: 332 DFEKNWWEVVDRFHMRDNVWLQSLYEDREYWVPVYMKDVSLAGMCTAQRSDSVNSGLDKY 391

Query: 403 VSALTNLHDFFQQFFRWLNYMRYREIEADFSSSHGDIVVQTQHHHLERSAFKLYTKTIFR 462
           +   T    F +Q+ + +      E +++  + +    +++     ++ A ++YT+ +F+
Sbjct: 392 IQRKTTFKAFLEQYKKMIQERYEEEEKSEIETLYKQPGLKSPSPFGKQMA-EVYTREMFK 450

Query: 463 LFR 465
            F+
Sbjct: 451 KFQ 453


>At4g08610 predicted transposon protein
          Length = 907

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 69/306 (22%), Positives = 127/306 (40%), Gaps = 14/306 (4%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGVNHHNQSIIFGS 256
           V A    ++LF   GV    + +   V+  DAT+ K  Y   LV  +  + ++ + I  S
Sbjct: 386 VDAQQKFKYLFVSLGVCIEGFKVMRKVVIVDATFLKTVYGDMLVFATAQDPNHHNYIIAS 445

Query: 257 AIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHLIR 316
           A+I  E + ++ W        +  +L +  ++D   S+  +I  VFP A H  C WHL +
Sbjct: 446 AVIDRENDASWSWFFNKLKTVIPDELGLVFVSDRHQSIIKSIMHVFPNARHGHCVWHLSQ 505

Query: 317 NATSNIK--NLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKMWA 374
           N    +K       + F  C       + F R++      F        L+++   + WA
Sbjct: 506 NVKVRVKTEKEEAAANFIACAHVYTQFE-FTREYARFRRRF--PNAGTYLDIWAPVENWA 562

Query: 375 AAHFRGKFFAGFRTTSRCEGLHSEF--GKYVSALTNLHDFFQQFFRWLNYMRYREIEADF 432
             +F G  +    T++ CE L+S F   +    L  L    ++   W N  ++R+    +
Sbjct: 563 MCYFEGDRY-NIDTSNVCESLNSTFESARKYFLLPLLDAIIEKISEWFN--KHRKKSVKY 619

Query: 433 SSSHGDI-VVQTQHHHL---ERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNH 488
           S + G + VV+ + H L    ++       +  R +  + E    + V ++ +  S    
Sbjct: 620 SETRGLVPVVENEIHSLCPIAKTMPVTELNSFERQYNVIGEGGMSYSVDLLRKTCSCRRF 679

Query: 489 IVRRYP 494
            V +YP
Sbjct: 680 DVDKYP 685


>At4g09380 putative protein
          Length = 960

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 77/345 (22%), Positives = 136/345 (39%), Gaps = 41/345 (11%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGV--NHHNQSIIF 254
           +  +   ++LF   G     +     V+  DAT+ K  Y   LVI +    NHH+  + F
Sbjct: 384 LEGEKKFKYLFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAQDPNHHHYPLAF 443

Query: 255 GSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHL 314
           G  II  E + +++W L+           +  I+D   S++ A++ V+P A H  C WHL
Sbjct: 444 G--IIDSEKDVSWIWFLENLKTVYSDVPGLVFISDRHQSIKKAVKTVYPNALHAACIWHL 501

Query: 315 IRNATSNIK--NLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKM 372
            +N    +K        KF+DC     + + F++++    + +    +  +   ++K   
Sbjct: 502 CQNMRDRVKIDKDGAAVKFRDCAHAYTESE-FEKEFGHFTSLWPKAADFLVKVGFEK--- 557

Query: 373 WAAAHFRGKFFAGFRTTSRCEGLHSEFGKY--VSALTNLHDFFQQFFRWLNYMRYREIEA 430
           W+  HF+G  +    T++  E ++  F K      L  +     +F  W N  R      
Sbjct: 558 WSRCHFKGDKY-NIDTSNSAESINGVFKKARKYHLLPMIDVMISKFSEWFNEHRQASGSC 616

Query: 431 DFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNHIV 490
             ++     V    H   + +A KL   T+F L                       N   
Sbjct: 617 PITAQVVPTVENILHIRCQVAA-KL---TVFEL-----------------------NSYN 649

Query: 491 RRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFL 535
           + Y   D+  +VS+     +  C+CKR +   I C H M   + L
Sbjct: 650 QEYNVIDLN-SVSFLVDLKMKSCSCKRFDIDKIPCVHAMAAARHL 693


>At5g27190 putative protein
          Length = 779

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 61/257 (23%), Positives = 109/257 (41%), Gaps = 11/257 (4%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGVNHHNQSIIFGS 256
           V A    ++LF   G     + +   V+  DAT+ K  Y   LV  +  + ++ + I  S
Sbjct: 367 VDAQQKFKYLFVALGACIEGFKVMRKVVIVDATFLKTVYGGMLVFATAQDPNHHNYIIAS 426

Query: 257 AIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHLIR 316
           A+I  E + ++ W        +     +  ++D   S+  +I +VFP A H  C WHL +
Sbjct: 427 AVIDRENDASWSWFFNKLKTVIPDVPGLVFVSDRHQSIIKSIMQVFPNARHGHCVWHLSQ 486

Query: 317 NATSNIK--NLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKMWA 374
           N    +K       + F  C       + F R++      F     P+ L+ +   + WA
Sbjct: 487 NVKVRVKTEKEEAAANFIACAHVYTQFE-FTREYARFRRRFP-NVGPY-LDRWAPVENWA 543

Query: 375 AAHFRGKFFAGFRTTSRCEGLHSEF--GKYVSALTNLHDFFQQFFRWLNYMRYREIEADF 432
             +F G  +    T++ CE L+S F   +    L  L    ++   W N  ++R+    +
Sbjct: 544 MCYFEGDRY-NIDTSNACESLNSTFERARKYFLLPLLDAIIEKISEWFN--KHRKESVKY 600

Query: 433 SSSHGDI-VVQTQHHHL 448
           S + G + VV+ + H L
Sbjct: 601 SKTRGLVPVVENEIHSL 617


>At3g47310 putative protein
          Length = 735

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 74/345 (21%), Positives = 132/345 (37%), Gaps = 41/345 (11%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGV--NHHNQSIIF 254
           +  +   ++LF   G     +     V+  DAT+ K  Y   LVI +    NHH+  + F
Sbjct: 333 LEGEKKFKYLFIALGACIEGFRTMRKVIVVDATHLKTVYGGMLVIATAQDPNHHHYPLAF 392

Query: 255 GSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHL 314
           G  II  E + +++W L+           +  I+D   S++  ++ V+P A H  C WHL
Sbjct: 393 G--IIDSENDVSWIWFLEKLKTVYSDVPGLVFISDRHQSIKKVVKTVYPNALHAACIWHL 450

Query: 315 IRNATSNIK--NLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKM 372
            +N    +K        KF+DC     + + F++++    + +    +  +   ++K   
Sbjct: 451 CQNMRDRVKIDKDGAAVKFRDCAHAYTESE-FEKEFGHFTSLWPKAADFLVKVGFEK--- 506

Query: 373 WAAAHFRGKFFAGFRTTSRCEGLHSEFGK--YVSALTNLHDFFQQFFRWLNYMRYREIEA 430
           W+  HF+G  +    T++  E ++  F K      L  +     +F  W N  R      
Sbjct: 507 WSRCHFKGDKY-NIDTSNSAESINGVFKKARKYHLLPMIDVMISKFSEWFNEHRQDSSSC 565

Query: 431 DFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNHIV 490
             ++     VV T  + L          T+F L                       N   
Sbjct: 566 PITAQ----VVPTVENILHIRCPIAAKLTVFEL-----------------------NSYN 598

Query: 491 RRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFL 535
           + Y   D+  +VS+     +  C+CK  +   I C H M   + L
Sbjct: 599 QEYNVIDLN-SVSFLVDLKMKSCSCKCFDIDKIPCVHAMAAARHL 642


>At4g28970 putative protein
          Length = 914

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 41/345 (11%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSGV--NHHNQSIIF 254
           +  +   ++LF   G     +     V+  DAT+ K  Y   LVI +    NHH+  + F
Sbjct: 384 LEGEKKFKYLFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAQDPNHHHYPLAF 443

Query: 255 GSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHL 314
           G  II  E + +++W L+           +  I+D   S++ A++ V+P A H  C WHL
Sbjct: 444 G--IIDSEKDVSWIWFLEKLKTVYSDVPGLVFISDRHQSIKKAVKTVYPNALHAACIWHL 501

Query: 315 IRNATS--NIKNLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKM 372
            +N      I       KF+DC     + + F++++    + +    +  +   ++K   
Sbjct: 502 CQNMRDRVTIDKDGAAVKFRDCAHAYTESE-FEKEFGHFTSLWPKAADFLVKVGFEK--- 557

Query: 373 WAAAHFRGKFFAGFRTTSRCEGLHSEFGK--YVSALTNLHDFFQQFFRWLNYMRYREIEA 430
           W+  HF+G  +    T++  E ++  F K      L  +     +F  W N  R    +A
Sbjct: 558 WSRCHFKGDKY-NIDTSNSAESINGVFKKARKYHLLPMIDVMISKFSEWFNEHR----QA 612

Query: 431 DFSSSHGDIVVQTQHHHLERSAFKLYTKTIFRLFRKVLERACRFDVHIVSQNGSIHNHIV 490
             S      VV T  + L          T+F L                       N   
Sbjct: 613 SGSCPITAQVVPTVENILHIRCQVAAKLTVFEL-----------------------NSYN 649

Query: 491 RRYPRQDIEWTVSYCEHRLVFECTCKRLETLGIACEHVMCVVKFL 535
           + Y   D+  +VS+     +  C+CK  +   I C H M   + L
Sbjct: 650 QEYNVIDLN-SVSFLVDLKMKSCSCKCFDIDKIPCVHAMAAARHL 693


>At1g36090 hypothetical protein
          Length = 645

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 54/213 (25%), Positives = 90/213 (41%), Gaps = 19/213 (8%)

Query: 197 VHADGSLQHLFWCDGVSCMDYSIFGDVLAFDATYKKIKYNTPLVIFSG--VNHHNQSIIF 254
           +  +   ++LF   G     +     V+  DAT+ K  Y   LVI +    NHH+  + F
Sbjct: 344 LEGEKKFKYLFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAHDPNHHHYPLAF 403

Query: 255 GSAIIGDETEDTYVWLLKIFVEAMGGKLPVSVITDGDLSMRNAIRKVFPEAHHRLCAWHL 314
           G  II  E + +++W L+           +  I+D   S++ A++ V+P A H  C WHL
Sbjct: 404 G--IIDSEKDVSWIWFLEKLKTVYSDVPRLVFISDRHQSIKKAVKTVYPNALHAACIWHL 461

Query: 315 IRNATSNIK--NLHFVSKFKDCLLGDVDVDVFQRKWEELVTEFGLEENPWMLEMYQKRKM 372
            +N    +K        KF+DC     +         E   EFG   + W   +    K+
Sbjct: 462 CQNMRDRVKIDKDGAAVKFRDCAHAYTE--------SEFEKEFGHFTSLWPKAVDFLVKV 513

Query: 373 ----WAAAHFRGKFFAGFRTTSRCEGLHSEFGK 401
               W+  HF+G  +    T++  E ++  F K
Sbjct: 514 GFEKWSRCHFKGDKY-NIDTSNSAESINGVFKK 545


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.327    0.139    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,281,066
Number of Sequences: 26719
Number of extensions: 568437
Number of successful extensions: 1950
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1747
Number of HSP's gapped (non-prelim): 153
length of query: 562
length of database: 11,318,596
effective HSP length: 104
effective length of query: 458
effective length of database: 8,539,820
effective search space: 3911237560
effective search space used: 3911237560
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)