BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC129092.1 - phase: 0 
         (391 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g66510 putative protein                                            548  e-156
At1g08620 hypothetical protein                                         33  0.27
At5g49140 disease resistance protein-like                              30  3.0
At1g57760 unknown protein                                              29  3.9
At4g24050 unknown protein                                              28  6.6
At1g09480 putative cinnamyl alcohol dehydrogenase                      28  8.7
At1g09290 unknown protein                                              28  8.7

>At1g66510 putative protein
          Length = 399

 Score =  548 bits (1413), Expect = e-156
 Identities = 267/393 (67%), Positives = 330/393 (83%), Gaps = 11/393 (2%)

Query: 1   MDSQTALELVKNGVTLLFLDVPQYTLVAIDTQVFSVGPTFKGIKMIPPGTHFVYYSSSTR 60
           MDS+ ALELVK+G TLLFLDVPQYTLV IDTQ+F+VGP FKGIKMIPPG HFV+YSSSTR
Sbjct: 1   MDSEKALELVKHGATLLFLDVPQYTLVGIDTQIFAVGPAFKGIKMIPPGIHFVFYSSSTR 60

Query: 61  DGKEFSPMIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEDERYRLAVKNMEFDRQLGPYN 120
           DG+EFSP IGFF+D  PS+VIVRKW+QQ+E L KVSEEE+ERY  AV+++EFD+ LGPYN
Sbjct: 61  DGREFSPTIGFFVDVAPSQVIVRKWNQQDEWLTKVSEEEEERYSQAVRSLEFDKNLGPYN 120

Query: 121 LSHYEDWKRLSDFITKSIIERLEPIGGEVSVECENDMFRNAPKTPMEKALDTQLKVDNSA 180
           L  Y +W+ LS++ITK ++E+ EP+GGE++V  E+ + +  PKT ME ALDTQ+K     
Sbjct: 121 LKQYGEWRHLSNYITKDVVEKFEPVGGEITVTYESAILKGGPKTAMEIALDTQMKKSKFT 180

Query: 181 TSVGKLQRKG--CYYTSIPRVVKCKGISGQELTSLNLDKTQLLETLLVKDYGGSEDLLLG 238
           TS  + Q KG   YYTSIPR++K KG+SGQELTS+NLDKTQLLE++L K+Y  SEDLLLG
Sbjct: 181 TSSTE-QPKGNRFYYTSIPRIIKHKGMSGQELTSMNLDKTQLLESVLSKEYKDSEDLLLG 239

Query: 239 ELQFAFIALMMGQSLEAFLQWKSLVSLLLGCTEAPFHTRTRLFTKFIKVIYYQLKYGLQK 298
           ELQF+F+A +MGQSLE+F+QWKS+VSLLLGCT APF TR++LFTKFIKVIY+QLKYGLQ 
Sbjct: 240 ELQFSFVAFLMGQSLESFMQWKSIVSLLLGCTSAPFQTRSQLFTKFIKVIYHQLKYGLQ- 298

Query: 299 DRKDNTGP-----LLLDDSWFSTDSFLHHHCKEFFSLVLDGSVIDGDLLKWTRKFKKLLE 353
             K+N+GP      LLDDSW ++DSFLH  CK+FF+LV + SV+DGDLL WTRKFK+LLE
Sbjct: 299 --KENSGPETGIHALLDDSWLASDSFLHFLCKDFFALVEETSVVDGDLLSWTRKFKELLE 356

Query: 354 SNLGWEFQQNNAVDGLYFDENDEFAPVVEMLDD 386
           + LGWEFQ+ +AVDG+YF+E+DE+APVVEMLD+
Sbjct: 357 NRLGWEFQKKSAVDGIYFEEDDEYAPVVEMLDE 389


>At1g08620 hypothetical protein
          Length = 1183

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 27/187 (14%)

Query: 41   KGIKMIPPGTHFVYYSSSTRDGKEFSPMIGFFIDAGPSEVIV-----RKWDQQEERLVKV 95
            K I ++ P T+  +Y S   D    SP+   ++++ PSEV V     R W+   ER   V
Sbjct: 986  KYINILDP-TNMCFYISEILDAGRNSPLFMVYLESNPSEVFVHMSPTRCWEMVRER---V 1041

Query: 96   SEEEDERYRLAVKNMEFDRQLGPYNLSHYEDWKRLSDFITKSIIERLEPIGGEVSVECEN 155
            ++E  ++++    +      L P   S   D   +  + + +I++ +E +  +V+  C  
Sbjct: 1042 NQEITKQHKAGKSD------LPPLQPSGSPDGFEMFGYSSPAIVQAIEAL--DVNRVC-T 1092

Query: 156  DMFRNAP--KTPMEKALDTQLKVDNSA--TSVGKLQRKGCYY---TSIPRVVKC--KGIS 206
            D + + P  +  ++   +  L+  N++  ++VG LQ    ++   T I  ++K   K  S
Sbjct: 1093 DYWDSRPYSRPQVQFPANPLLREANTSGRSNVGNLQLNPGHHISPTGINSILKVLFKKAS 1152

Query: 207  GQELTSL 213
             +EL+SL
Sbjct: 1153 MEELSSL 1159


>At5g49140 disease resistance protein-like
          Length = 980

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)

Query: 125 EDWKRLSDFITKSIIERLEPIGGEVSVECENDMFRNAPKTPMEKALDTQLKVDNSATSVG 184
           + WK  +DF+TK   + L  + G  S + EN +     ++ MEK +      D+    VG
Sbjct: 155 QSWKNEADFLTKIAKDILAKLNGTPSNDFENII---GIESHMEKMVQLLCLNDDDVRMVG 211

Query: 185 KLQRKGCYYTSIPRVVKCKGISGQELTSLNLDKTQLLETLLVKDYGGSEDLLLGELQFAF 244
                G   T+I RV+  +  SG    ++ ++  +     +V    G E  L   LQ  F
Sbjct: 212 IWGPAGIGKTTIARVLHSR-FSGDFRFTVFMENVRGNYQRIVD--SGGEYNLQARLQKEF 268

Query: 245 IALMMGQ 251
           + ++  Q
Sbjct: 269 LPIIFNQ 275


>At1g57760 unknown protein
          Length = 107

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 56  SSSTRDGKEFSPMIGFFIDAGPSEVIVRKW-----DQQEERLVKVSEEEDE 101
           SSS    K    ++GF   AG S  + + W     D+Q  RL+K+ EE+DE
Sbjct: 48  SSSKTGTKVIFILLGFGAVAGLSFFLYKLWQKKKRDEQYARLLKLFEEDDE 98


>At4g24050 unknown protein
          Length = 332

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 135 TKSIIERLEPIGGEVSVECENDMFRNAPKTPMEKALDTQL---KVDNSATSVGKLQRKGC 191
           TK +  RL+ IG  V+V C +        T   + L T L          +V +     C
Sbjct: 216 TKELSSRLQKIGANVTVNCVHPGVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTC 275

Query: 192 YYTSIPRVVKCKGISGQELTSLN 214
           Y  + PR+V    +SG+  T  N
Sbjct: 276 YVATNPRLV---NVSGKYFTDCN 295


>At1g09480 putative cinnamyl alcohol dehydrogenase
          Length = 369

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 350 KLLESNLGWEFQQNNAVDGLYFDENDEFAPVVE 382
           K+L  N  WEF ++N +D +  +    F P+++
Sbjct: 214 KILAENAAWEFAKDNGIDMVVLNPGFIFGPLLQ 246


>At1g09290 unknown protein
          Length = 249

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 16/52 (30%), Positives = 24/52 (45%)

Query: 146 GGEVSVECENDMFRNAPKTPMEKALDTQLKVDNSATSVGKLQRKGCYYTSIP 197
           GGE +V  END  +   + P  + L    +  NS  S+ KL + G    + P
Sbjct: 128 GGEKTVPLENDALQETGENPNVEDLKLANEEHNSLMSLVKLTKSGLLLFTFP 179


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.138    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,989,134
Number of Sequences: 26719
Number of extensions: 395135
Number of successful extensions: 993
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 988
Number of HSP's gapped (non-prelim): 7
length of query: 391
length of database: 11,318,596
effective HSP length: 101
effective length of query: 290
effective length of database: 8,619,977
effective search space: 2499793330
effective search space used: 2499793330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)